CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = L219S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a219L219SnonsyntTgtCg1161120.96551726047-26049
ORF3a219L219SnonsyntTGtCT11640.034482826047-26049

Details of the mutation L219S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a219L219StTgtCg112116All0.000021
ORF3a219L219StTGtCT4116All0.000001
ORF3a219L219StTgtCg2929AY.40.000045
ORF3a219L219StTgtCg1919B.1.6370.001388
ORF3a219L219StTgtCg1010B.1.1.70.000009
ORF3a219L219StTgtCg46AY.430.000018
ORF3a219L219StTGtCT26AY.430.000009
ORF3a219L219StTgtCg55AY.20.001781
ORF3a219L219StTgtCg33AY.46.60.000217
ORF3a219L219StTgtCg33AY.98.10.000145
ORF3a219L219StTgtCg33B.1.360.000438
ORF3a219L219StTgtCg33B.1.5260.000071
ORF3a219L219StTgtCg33B.1.617.20.000011
ORF3a219L219StTgtCg33P.10.000047
ORF3a219L219StTgtCg22AY.1000.000092
ORF3a219L219StTgtCg22AY.30.00002
ORF3a219L219StTgtCg22B.10.000018
ORF3a219L219StTgtCg22B.1.20.000018
ORF3a219L219StTgtCg22B.1.214.10.04
ORF3a219L219StTgtCg11AY.1030.000006
ORF3a219L219StTgtCg11AY.250.000006
ORF3a219L219StTgtCg11AY.440.000006
ORF3a219L219StTGtCT11AY.5.40.000277
ORF3a219L219StTGtCT11AY.670.000464
ORF3a219L219StTgtCg11AY.750.000056
ORF3a219L219StTgtCg11AY.920.000287
ORF3a219L219StTgtCg11B0.000128
ORF3a219L219StTgtCg11B.1.10.000018
ORF3a219L219StTgtCg11B.1.1.330.000421
ORF3a219L219StTgtCg11B.1.1.3540.004386
ORF3a219L219StTgtCg11B.1.36.180.00042
ORF3a219L219StTgtCg11B.1.4590.004082
ORF3a219L219StTgtCg11B.1.5820.000491
ORF3a219L219StTgtCg11B.1.6210.000089
ORF3a219L219StTgtCg11B.1.621.10.000506
ORF3a219L219StTgtCg11C.360.000911
ORF3a219L219StTgtCg11D.20.000075
ORF3a219L219StTgtCg11P.1.150.000232