CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = I62T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a62I62TnonsynaTcaCc409140850.99853325576-25578
ORF3a62I62TnonsynaTCaCT409160.0014666325576-25578

Details of the mutation I62T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a62I62TaTcaCc40854091All0.000781
ORF3a62I62TaTCaCT64091All0.000001
ORF3a62I62TaTcaCc24812482B.1.5610.984915
ORF3a62I62TaTCaCT12482B.1.5610.000397
ORF3a62I62TaTcaCc539539B.1.438.10.057814
ORF3a62I62TaTcaCc206206B.1.1.2940.260759
ORF3a62I62TaTcaCc177180B.1.1.70.000158
ORF3a62I62TaTCaCT3180B.1.1.70.000003
ORF3a62I62TaTcaCc8585B.10.000779
ORF3a62I62TaTcaCc8082B.1.1770.001053
ORF3a62I62TaTCaCT282B.1.1770.000026
ORF3a62I62TaTcaCc4747B.1.617.20.000177
ORF3a62I62TaTcaCc3838AY.40.000059
ORF3a62I62TaTcaCc3434B.1.20.000299
ORF3a62I62TaTcaCc3333AY.470.001026
ORF3a62I62TaTcaCc2727B.1.10.00049
ORF3a62I62TaTcaCc2323B.30.019103
ORF3a62I62TaTcaCc1616AY.390.000395
ORF3a62I62TaTcaCc1515AY.90.001014
ORF3a62I62TaTcaCc1414AY.440.000085
ORF3a62I62TaTcaCc1212AY.1020.000318
ORF3a62I62TaTcaCc1111AY.1030.000068
ORF3a62I62TaTcaCc1111AY.250.000066
ORF3a62I62TaTcaCc88AY.39.10.000317
ORF3a62I62TaTcaCc88AY.480.003721
ORF3a62I62TaTcaCc88P.10.000126
ORF3a62I62TaTcaCc88P.1.140.000382
ORF3a62I62TaTcaCc77AY.230.000488
ORF3a62I62TaTcaCc77AY.430.000031
ORF3a62I62TaTcaCc77AY.920.002011
ORF3a62I62TaTcaCc77B.1.2320.003761
ORF3a62I62TaTcaCc66B.1.5770.004124
ORF3a62I62TaTcaCc55AY.30.00005
ORF3a62I62TaTcaCc55AY.420.000201
ORF3a62I62TaTcaCc55AY.750.00028
ORF3a62I62TaTcaCc55B.1.1.5190.000199
ORF3a62I62TaTcaCc55B.1.2410.004058
ORF3a62I62TaTcaCc55B.1.2810.108696
ORF3a62I62TaTcaCc55B.1.5820.002453
ORF3a62I62TaTcaCc55B.1.6180.020161
ORF3a62I62TaTcaCc44AY.1100.000451
ORF3a62I62TaTcaCc44AY.1160.001147
ORF3a62I62TaTcaCc44AY.50.000083
ORF3a62I62TaTcaCc44B.1.2210.000284
ORF3a62I62TaTcaCc44B.1.5250.000453
ORF3a62I62TaTcaCc44B.1.5260.000094
ORF3a62I62TaTcaCc44B.1.5960.000349
ORF3a62I62TaTcaCc44P.1.150.000929
ORF3a62I62TaTcaCc33AY.160.001139
ORF3a62I62TaTcaCc33AY.260.000085
ORF3a62I62TaTcaCc33AY.34.10.00153
ORF3a62I62TaTcaCc33B.1.1.4130.02069
ORF3a62I62TaTcaCc33B.1.3510.000089
ORF3a62I62TaTcaCc33B.1.3690.000856
ORF3a62I62TaTcaCc33Q.80.000495
ORF3a62I62TaTcaCc33R.10.00027
ORF3a62I62TaTcaCc22AY.1190.000071
ORF3a62I62TaTcaCc22AY.290.000032
ORF3a62I62TaTcaCc22AY.3.10.000171
ORF3a62I62TaTcaCc22AY.4.20.000043
ORF3a62I62TaTcaCc22AY.540.000191
ORF3a62I62TaTcaCc22AY.760.009662
ORF3a62I62TaTcaCc22B.1.1.3180.000604
ORF3a62I62TaTcaCc22B.1.1600.000062
ORF3a62I62TaTcaCc22B.1.177.350.001382
ORF3a62I62TaTcaCc22B.1.2580.000133
ORF3a62I62TaTcaCc22B.1.3110.000549
ORF3a62I62TaTcaCc22B.1.4450.023529
ORF3a62I62TaTcaCc22B.1.4700.002809
ORF3a62I62TaTcaCc22B.1.5550.044444
ORF3a62I62TaTcaCc22B.1.617.10.000258
ORF3a62I62TaTcaCc22B.1.6210.000177
ORF3a62I62TaTcaCc11A.23.10.000704
ORF3a62I62TaTcaCc11AY.1000.000046
ORF3a62I62TaTcaCc11AY.140.000088
ORF3a62I62TaTcaCc11AY.200.000039
ORF3a62I62TaTcaCc11AY.270.000065
ORF3a62I62TaTcaCc11AY.29.10.000221
ORF3a62I62TaTcaCc11AY.300.000396
ORF3a62I62TaTcaCc11AY.4.40.000409
ORF3a62I62TaTcaCc11AY.46.40.000165
ORF3a62I62TaTcaCc11AY.550.000917
ORF3a62I62TaTcaCc11AY.570.000656
ORF3a62I62TaTcaCc11AY.60.000041
ORF3a62I62TaTcaCc11AY.610.000105
ORF3a62I62TaTcaCc11AY.620.000436
ORF3a62I62TaTcaCc11AY.840.000437
ORF3a62I62TaTcaCc11B.1.1.3160.000925
ORF3a62I62TaTcaCc11B.1.1.700.000341
ORF3a62I62TaTcaCc11B.1.1390.000733
ORF3a62I62TaTcaCc11B.1.177.730.000566
ORF3a62I62TaTcaCc11B.1.177.770.000726
ORF3a62I62TaTcaCc11B.1.221.30.000833
ORF3a62I62TaTcaCc11B.1.2400.000216
ORF3a62I62TaTcaCc11B.1.2430.00007
ORF3a62I62TaTcaCc11B.1.2470.014925
ORF3a62I62TaTcaCc11B.1.2770.02381
ORF3a62I62TaTcaCc11B.1.2840.013158
ORF3a62I62TaTcaCc11B.1.3350.010309
ORF3a62I62TaTcaCc11B.1.360.000146
ORF3a62I62TaTcaCc11B.1.36.170.000494
ORF3a62I62TaTcaCc11B.1.4080.00369
ORF3a62I62TaTcaCc11B.1.4240.008065
ORF3a62I62TaTcaCc11B.1.4270.00005
ORF3a62I62TaTcaCc11B.1.4290.000024
ORF3a62I62TaTcaCc11B.1.4590.004082
ORF3a62I62TaTcaCc11B.1.4600.017857
ORF3a62I62TaTcaCc11B.1.6100.003546
ORF3a62I62TaTcaCc11B.1.621.10.000506
ORF3a62I62TaTcaCc11B.1.6280.000352
ORF3a62I62TaTcaCc11B.400.000364
ORF3a62I62TaTcaCc11B.60.00091
ORF3a62I62TaTcaCc11C.36.30.000567
ORF3a62I62TaTcaCc11P.1.100.000269