CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = H93Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a93H93YnonsynCacTac546354600.99945125669-25671
ORF3a93H93YnonsynCaCTaT546330.00054914925669-25671

Details of the mutation H93Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a93H93YCacTac54605463All0.001044
ORF3a93H93YCaCTaT35463All0.000001
ORF3a93H93YCacTac13541354AY.470.042116
ORF3a93H93YCacTac392393AY.250.002358
ORF3a93H93YCaCTaT1393AY.250.000006
ORF3a93H93YCacTac348349B.1.1.70.000312
ORF3a93H93YCaCTaT1349B.1.1.70.000001
ORF3a93H93YCacTac304304AY.99.20.028016
ORF3a93H93YCacTac303303B.3.10.502488
ORF3a93H93YCacTac293293AY.1200.010893
ORF3a93H93YCacTac292292AY.440.001777
ORF3a93H93YCacTac283283B.1.1600.008826
ORF3a93H93YCacTac279279AY.4.20.006051
ORF3a93H93YCacTac191191B.1.617.20.000719
ORF3a93H93YCacTac135135AY.1000.006211
ORF3a93H93YCacTac110110B.10.001008
ORF3a93H93YCacTac105105B.1.3510.003121
ORF3a93H93YCacTac104104AY.40.000162
ORF3a93H93YCacTac7373B.1.20.000643
ORF3a93H93YCacTac6262AY.1030.000385
ORF3a93H93YCacTac6060AY.390.001483
ORF3a93H93YCacTac5353AY.430.000235
ORF3a93H93YCacTac5252B.1.4290.001224
ORF3a93H93YCacTac4747B.1.177.160.031229
ORF3a93H93YCacTac3939AY.30.000388
ORF3a93H93YCacTac3535B.1.1770.000461
ORF3a93H93YCacTac3535B.1.351.20.01059
ORF3a93H93YCacTac3030AY.910.021914
ORF3a93H93YCacTac3030B.1.160.130.833333
ORF3a93H93YCacTac2929P.1.140.001386
ORF3a93H93YCacTac2424AY.1020.000636
ORF3a93H93YCacTac2121P.10.000331
ORF3a93H93YCacTac1919B.1.1.3580.655172
ORF3a93H93YCacTac1717AY.9.20.000624
ORF3a93H93YCacTac1313AY.690.002427
ORF3a93H93YCacTac1212B.1.1.5190.000477
ORF3a93H93YCacTac1212B.1.5260.000282
ORF3a93H93YCacTac1010AY.130.00161
ORF3a93H93YCacTac99AY.1180.000564
ORF3a93H93YCacTac99AY.46.40.001481
ORF3a93H93YCacTac99B.1.10.000163
ORF3a93H93YCacTac99B.1.1.330.003788
ORF3a93H93YCacTac99B.1.2430.000626
ORF3a93H93YCacTac88AY.850.003417
ORF3a93H93YCacTac77AY.1170.000592
ORF3a93H93YCacTac77AY.1190.000247
ORF3a93H93YCacTac77AY.450.000852
ORF3a93H93YCacTac77AY.7.10.000789
ORF3a93H93YCacTac77B.1.3990.01354
ORF3a93H93YCacTac66AY.260.00017
ORF3a93H93YCacTac66AY.50.000124
ORF3a93H93YCacTac66AY.980.000474
ORF3a93H93YCacTac66B.1.1.10.00196
ORF3a93H93YCacTac66B.1.1.3000.064516
ORF3a93H93YCacTac66B.30.004983
ORF3a93H93YCacTac55AY.230.000349
ORF3a93H93YCacTac55AY.750.00028
ORF3a93H93YCacTac55B.1.177.600.001092
ORF3a93H93YCacTac55P.1.70.001596
ORF3a93H93YCacTac44B.1.1.390.002039
ORF3a93H93YCacTac44B.1.2210.000284
ORF3a93H93YCacTac34B.1.360.000438
ORF3a93H93YCaCTaT14B.1.360.000146
ORF3a93H93YCacTac44B.1.36.180.001681
ORF3a93H93YCacTac33AY.460.000312
ORF3a93H93YCacTac33AY.540.000286
ORF3a93H93YCacTac33AY.620.001307
ORF3a93H93YCacTac33AY.670.001393
ORF3a93H93YCacTac33AY.840.001312
ORF3a93H93YCacTac33AY.920.000862
ORF3a93H93YCacTac33B.1.1.2160.002671
ORF3a93H93YCacTac33B.1.1.280.000934
ORF3a93H93YCacTac33B.1.2800.021429
ORF3a93H93YCacTac33B.1.6090.001438
ORF3a93H93YCacTac33C.370.000348
ORF3a93H93YCacTac22A.2.5.20.003145
ORF3a93H93YCacTac22AY.1100.000225
ORF3a93H93YCacTac22AY.1130.000285
ORF3a93H93YCacTac22AY.120.10.000642
ORF3a93H93YCacTac22AY.140.000176
ORF3a93H93YCacTac22AY.200.000078
ORF3a93H93YCacTac22AY.240.000862
ORF3a93H93YCacTac22AY.270.000129
ORF3a93H93YCacTac22AY.350.000466
ORF3a93H93YCacTac22AY.360.000296
ORF3a93H93YCacTac22AY.4.50.000215
ORF3a93H93YCacTac22AY.5.40.000553
ORF3a93H93YCacTac22AY.610.00021
ORF3a93H93YCacTac22B.1.1.2340.024096
ORF3a93H93YCacTac22B.1.1.2840.000215
ORF3a93H93YCacTac22B.1.3360.004878
ORF3a93H93YCacTac22B.1.36.290.001035
ORF3a93H93YCacTac22B.1.3980.005952
ORF3a93H93YCacTac22B.1.4090.001563
ORF3a93H93YCacTac22B.1.6100.007092
ORF3a93H93YCacTac22Q.40.00091
ORF3a93H93YCacTac11A0.000387
ORF3a93H93YCacTac11A.2.20.001689
ORF3a93H93YCacTac11A.30.002096
ORF3a93H93YCacTac11AD.20.000219
ORF3a93H93YCacTac11AE.80.000489
ORF3a93H93YCacTac11AY.100.00053
ORF3a93H93YCacTac11AY.1050.000643
ORF3a93H93YCacTac11AY.290.000016
ORF3a93H93YCacTac11AY.320.000532
ORF3a93H93YCacTac11AY.330.000067
ORF3a93H93YCacTac11AY.39.10.00004
ORF3a93H93YCacTac11AY.4.2.10.000149
ORF3a93H93YCacTac11AY.420.00004
ORF3a93H93YCacTac11AY.46.20.000635
ORF3a93H93YCacTac11AY.5.10.003759
ORF3a93H93YCacTac11AY.5.20.002463
ORF3a93H93YCacTac11AY.5.30.000337
ORF3a93H93YCacTac11AY.530.000288
ORF3a93H93YCacTac11AY.580.000907
ORF3a93H93YCacTac11AY.590.00053
ORF3a93H93YCacTac11AY.60.000041
ORF3a93H93YCacTac11AY.740.000116
ORF3a93H93YCacTac11AY.75.10.00018
ORF3a93H93YCacTac11AY.80.000606
ORF3a93H93YCacTac11AY.930.000273
ORF3a93H93YCacTac11AY.98.10.000048
ORF3a93H93YCacTac11B0.000128
ORF3a93H93YCacTac11B.1.1.1760.000439
ORF3a93H93YCacTac11B.1.1.1920.002309
ORF3a93H93YCacTac11B.1.1.2220.000204
ORF3a93H93YCacTac11B.1.1.3150.008475
ORF3a93H93YCacTac11B.1.1.3180.000302
ORF3a93H93YCacTac11B.1.1.630.000386
ORF3a93H93YCacTac11B.1.1390.000733
ORF3a93H93YCacTac11B.1.177.210.000076
ORF3a93H93YCacTac11B.1.177.730.000566
ORF3a93H93YCacTac11B.1.2340.000132
ORF3a93H93YCacTac11B.1.2580.000067
ORF3a93H93YCacTac11B.1.2810.021739
ORF3a93H93YCacTac11B.1.3200.001245
ORF3a93H93YCacTac11B.1.3490.000715
ORF3a93H93YCacTac11B.1.3630.012987
ORF3a93H93YCacTac11B.1.440.008333
ORF3a93H93YCacTac11B.1.5410.004425
ORF3a93H93YCacTac11B.1.5580.004566
ORF3a93H93YCacTac11B.1.5640.000426
ORF3a93H93YCacTac11B.1.5960.000087
ORF3a93H93YCacTac11B.1.617.10.000129
ORF3a93H93YCacTac11B.1.6340.003425
ORF3a93H93YCacTac11B.1.80.001972
ORF3a93H93YCacTac11B.60.00091
ORF3a93H93YCacTac11C.230.005814
ORF3a93H93YCacTac11C.36.30.000567
ORF3a93H93YCacTac11D.20.000075
ORF3a93H93YCacTac11P.1.120.000484
ORF3a93H93YCacTac11P.20.000187
ORF3a93H93YCacTac11Q.10.000126
ORF3a93H93YCacTac11Q.30.000145
ORF3a93H93YCacTac11R.10.00009
ORF3a93H93YCacTac11W.40.001351