CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF3a | 78 | H78H | syn | caC | caT | 14826 | 14826 | 1 | 25624-25626 |
Details of the mutation H78H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF3a | 78 | H78H | caC | caT | 14826 | 14826 | All | 0.002836 |
ORF3a | 78 | H78H | caC | caT | 5191 | 5191 | B.1.1.7 | 0.004647 |
ORF3a | 78 | H78H | caC | caT | 1628 | 1628 | Q.2 | 0.998773 |
ORF3a | 78 | H78H | caC | caT | 1082 | 1082 | AY.75 | 0.060616 |
ORF3a | 78 | H78H | caC | caT | 676 | 676 | AY.47 | 0.021027 |
ORF3a | 78 | H78H | caC | caT | 636 | 636 | Q.1 | 0.080344 |
ORF3a | 78 | H78H | caC | caT | 611 | 611 | AY.43 | 0.002707 |
ORF3a | 78 | H78H | caC | caT | 518 | 518 | B.1.1.288 | 0.992337 |
ORF3a | 78 | H78H | caC | caT | 433 | 433 | B.1.2 | 0.003813 |
ORF3a | 78 | H78H | caC | caT | 422 | 422 | AY.44 | 0.002569 |
ORF3a | 78 | H78H | caC | caT | 389 | 389 | AY.4 | 0.000605 |
ORF3a | 78 | H78H | caC | caT | 339 | 339 | B.1.617.2 | 0.001276 |
ORF3a | 78 | H78H | caC | caT | 210 | 210 | B.1.1.294 | 0.265823 |
ORF3a | 78 | H78H | caC | caT | 197 | 197 | B.1.429 | 0.004635 |
ORF3a | 78 | H78H | caC | caT | 181 | 181 | P.1 | 0.002851 |
ORF3a | 78 | H78H | caC | caT | 152 | 152 | AY.103 | 0.000944 |
ORF3a | 78 | H78H | caC | caT | 145 | 145 | P.2 | 0.027062 |
ORF3a | 78 | H78H | caC | caT | 142 | 142 | B.1 | 0.001301 |
ORF3a | 78 | H78H | caC | caT | 108 | 108 | B.1.1 | 0.001959 |
ORF3a | 78 | H78H | caC | caT | 101 | 101 | B.1.177 | 0.00133 |
ORF3a | 78 | H78H | caC | caT | 93 | 93 | B.1.603 | 0.989362 |
ORF3a | 78 | H78H | caC | caT | 88 | 88 | AY.3 | 0.000875 |
ORF3a | 78 | H78H | caC | caT | 87 | 87 | B.1.177.60 | 0.019004 |
ORF3a | 78 | H78H | caC | caT | 85 | 85 | AY.102 | 0.002254 |
ORF3a | 78 | H78H | caC | caT | 84 | 84 | AY.25 | 0.000505 |
ORF3a | 78 | H78H | caC | caT | 66 | 66 | AY.46.1 | 0.067762 |
ORF3a | 78 | H78H | caC | caT | 62 | 62 | AY.4.2 | 0.001345 |
ORF3a | 78 | H78H | caC | caT | 47 | 47 | B.1.36.17 | 0.023221 |
ORF3a | 78 | H78H | caC | caT | 44 | 44 | AY.26 | 0.001246 |
ORF3a | 78 | H78H | caC | caT | 38 | 38 | B.1.637 | 0.002777 |
ORF3a | 78 | H78H | caC | caT | 37 | 37 | AY.33 | 0.002471 |
ORF3a | 78 | H78H | caC | caT | 36 | 36 | B.1.160 | 0.001123 |
ORF3a | 78 | H78H | caC | caT | 30 | 30 | B.1.466.2 | 0.011737 |
ORF3a | 78 | H78H | caC | caT | 29 | 29 | AY.5 | 0.000599 |
ORF3a | 78 | H78H | caC | caT | 29 | 29 | B.1.1.519 | 0.001152 |
ORF3a | 78 | H78H | caC | caT | 26 | 26 | B.1.351 | 0.000773 |
ORF3a | 78 | H78H | caC | caT | 24 | 24 | B.1.621 | 0.002124 |
ORF3a | 78 | H78H | caC | caT | 23 | 23 | AY.39 | 0.000568 |
ORF3a | 78 | H78H | caC | caT | 20 | 20 | P.4 | 0.076046 |
ORF3a | 78 | H78H | caC | caT | 19 | 19 | B.1.36.29 | 0.009829 |
ORF3a | 78 | H78H | caC | caT | 19 | 19 | B.1.427 | 0.000959 |
ORF3a | 78 | H78H | caC | caT | 18 | 18 | AY.42 | 0.000724 |
ORF3a | 78 | H78H | caC | caT | 17 | 17 | AY.23 | 0.001186 |
ORF3a | 78 | H78H | caC | caT | 15 | 15 | AY.20 | 0.000583 |
ORF3a | 78 | H78H | caC | caT | 14 | 14 | AY.36 | 0.002075 |
ORF3a | 78 | H78H | caC | caT | 13 | 13 | P.1.14 | 0.000621 |
ORF3a | 78 | H78H | caC | caT | 12 | 12 | AY.117 | 0.001014 |
ORF3a | 78 | H78H | caC | caT | 11 | 11 | AY.99.2 | 0.001014 |
ORF3a | 78 | H78H | caC | caT | 11 | 11 | B.1.258 | 0.000732 |
ORF3a | 78 | H78H | caC | caT | 11 | 11 | B.1.560 | 0.050926 |
ORF3a | 78 | H78H | caC | caT | 11 | 11 | B.1.596 | 0.000959 |
ORF3a | 78 | H78H | caC | caT | 10 | 10 | AY.9.2 | 0.000367 |
ORF3a | 78 | H78H | caC | caT | 10 | 10 | B.1.1.434 | 0.003486 |
ORF3a | 78 | H78H | caC | caT | 10 | 10 | B.1.258.17 | 0.00104 |
ORF3a | 78 | H78H | caC | caT | 10 | 10 | D.2 | 0.00075 |
ORF3a | 78 | H78H | caC | caT | 9 | 9 | B.1.1.280 | 0.027778 |
ORF3a | 78 | H78H | caC | caT | 9 | 9 | P.1.15 | 0.002091 |
ORF3a | 78 | H78H | caC | caT | 8 | 8 | AY.98.1 | 0.000387 |
ORF3a | 78 | H78H | caC | caT | 8 | 8 | B.1.1.317 | 0.003294 |
ORF3a | 78 | H78H | caC | caT | 8 | 8 | B.1.369 | 0.002282 |
ORF3a | 78 | H78H | caC | caT | 8 | 8 | B.1.524 | 0.011252 |
ORF3a | 78 | H78H | caC | caT | 7 | 7 | AY.116 | 0.002007 |
ORF3a | 78 | H78H | caC | caT | 7 | 7 | AY.119 | 0.000247 |
ORF3a | 78 | H78H | caC | caT | 7 | 7 | AY.29 | 0.00011 |
ORF3a | 78 | H78H | caC | caT | 7 | 7 | AY.46.6 | 0.000505 |
ORF3a | 78 | H78H | caC | caT | 7 | 7 | AY.9 | 0.000473 |
ORF3a | 78 | H78H | caC | caT | 7 | 7 | AY.92 | 0.002011 |
ORF3a | 78 | H78H | caC | caT | 7 | 7 | B.1.221 | 0.000497 |
ORF3a | 78 | H78H | caC | caT | 7 | 7 | B.1.36 | 0.001021 |
ORF3a | 78 | H78H | caC | caT | 6 | 6 | AY.118 | 0.000376 |
ORF3a | 78 | H78H | caC | caT | 6 | 6 | AY.3.1 | 0.000512 |
ORF3a | 78 | H78H | caC | caT | 6 | 6 | AY.46 | 0.000624 |
ORF3a | 78 | H78H | caC | caT | 6 | 6 | AY.6 | 0.000247 |
ORF3a | 78 | H78H | caC | caT | 6 | 6 | B.1.1.297 | 0.013423 |
ORF3a | 78 | H78H | caC | caT | 6 | 6 | B.1.1.37 | 0.001157 |
ORF3a | 78 | H78H | caC | caT | 6 | 6 | B.1.177.21 | 0.000459 |
ORF3a | 78 | H78H | caC | caT | 6 | 6 | L.4 | 0.3 |
ORF3a | 78 | H78H | caC | caT | 6 | 6 | P.1.7 | 0.001916 |
ORF3a | 78 | H78H | caC | caT | 5 | 5 | AY.121 | 0.000677 |
ORF3a | 78 | H78H | caC | caT | 5 | 5 | AY.45 | 0.000608 |
ORF3a | 78 | H78H | caC | caT | 5 | 5 | AY.75.1 | 0.000902 |
ORF3a | 78 | H78H | caC | caT | 5 | 5 | AY.86 | 0.004149 |
ORF3a | 78 | H78H | caC | caT | 5 | 5 | B.1.1.214 | 0.000277 |
ORF3a | 78 | H78H | caC | caT | 5 | 5 | B.1.177.10 | 0.00439 |
ORF3a | 78 | H78H | caC | caT | 5 | 5 | B.1.243 | 0.000348 |
ORF3a | 78 | H78H | caC | caT | 5 | 5 | B.1.470 | 0.007022 |
ORF3a | 78 | H78H | caC | caT | 5 | 5 | B.1.526 | 0.000118 |
ORF3a | 78 | H78H | caC | caT | 4 | 4 | AY.4.5 | 0.00043 |
ORF3a | 78 | H78H | caC | caT | 4 | 4 | AY.46.5 | 0.000794 |
ORF3a | 78 | H78H | caC | caT | 4 | 4 | AY.5.4 | 0.001107 |
ORF3a | 78 | H78H | caC | caT | 4 | 4 | AY.9.1 | 0.000335 |
ORF3a | 78 | H78H | caC | caT | 4 | 4 | B.1.1.192 | 0.009238 |
ORF3a | 78 | H78H | caC | caT | 4 | 4 | B.1.1.222 | 0.000816 |
ORF3a | 78 | H78H | caC | caT | 4 | 4 | B.1.1.396 | 0.181818 |
ORF3a | 78 | H78H | caC | caT | 4 | 4 | B.1.234 | 0.000528 |
ORF3a | 78 | H78H | caC | caT | 4 | 4 | B.1.391 | 0.00451 |
ORF3a | 78 | H78H | caC | caT | 4 | 4 | P.1.17 | 0.000647 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.111 | 0.000549 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.120 | 0.000112 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.27 | 0.000194 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.30 | 0.001187 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.38 | 0.001498 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.39.1 | 0.000119 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.4.4 | 0.001227 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.46.2 | 0.001906 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.54 | 0.000286 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.65 | 0.001599 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | AY.78 | 0.004622 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B | 0.000383 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.1.203 | 0.050847 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.1.216 | 0.002671 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.1.274 | 0.015152 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.1.318 | 0.000905 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.1.433 | 0.004274 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.177.56 | 0.002003 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.177.7 | 0.000495 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.177.79 | 0.007026 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.177.86 | 0.00055 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.400 | 0.001287 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | B.1.595 | 0.000783 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | C.37 | 0.000348 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | P.1.12 | 0.001452 |
ORF3a | 78 | H78H | caC | caT | 3 | 3 | Q.8 | 0.000495 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | 0.111111 | |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | A.1 | 0.000564 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | AD.2 | 0.000438 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | AY.100 | 0.000092 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | AY.106 | 0.00067 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | AY.24 | 0.000862 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | AY.40 | 0.001929 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | AY.59 | 0.001059 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | AY.62 | 0.000871 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | AY.68 | 0.000547 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | AY.79 | 0.002421 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | AY.93 | 0.000546 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.1.170 | 0.002494 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.1.306 | 0.000877 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.1.33 | 0.000842 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.1.456 | 0.111111 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.128 | 0.001271 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.177.33 | 0.003289 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.177.73 | 0.001133 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.239 | 0.002442 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.241 | 0.001623 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.281 | 0.043478 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.311 | 0.000549 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.336 | 0.004878 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.445 | 0.023529 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.497 | 0.00063 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.575 | 0.000607 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.575.1 | 0.004878 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.577 | 0.001375 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.619 | 0.001742 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.1.631 | 0.006734 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | B.40 | 0.000729 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | C.37.1 | 0.005236 |
ORF3a | 78 | H78H | caC | caT | 2 | 2 | W.4 | 0.002703 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | A | 0.000387 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | A.2.5.2 | 0.001572 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AE.7 | 0.083333 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.1 | 0.000396 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.101 | 0.00049 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.104 | 0.001984 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.108 | 0.001103 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.11 | 0.001339 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.110 | 0.000113 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.113 | 0.000142 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.12 | 0.000316 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.13 | 0.000161 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.14 | 0.000088 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.16 | 0.00038 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.16.1 | 0.00047 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.21 | 0.001898 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.29.1 | 0.000221 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.32 | 0.000532 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.34 | 0.000097 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.46.3 | 0.000934 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.48 | 0.000465 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.5.3 | 0.000337 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.51 | 0.000909 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.55 | 0.000917 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.61 | 0.000105 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.67 | 0.000464 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.69 | 0.000187 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.71 | 0.000475 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.72 | 0.001361 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.74 | 0.000116 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.77 | 0.001127 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.84 | 0.000437 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.88 | 0.000884 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.98 | 0.000079 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AY.99 | 0.001049 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AZ.1 | 0.000867 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | AZ.3 | 0.00152 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.121 | 0.002427 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.158 | 0.012195 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.161 | 0.003534 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.174 | 0.003378 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.227 | 0.004348 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.229 | 0.005747 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.265 | 0.003155 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.277 | 0.000759 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.279 | 0.001121 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.28 | 0.000311 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.302 | 0.002075 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.322 | 0.008772 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.348 | 0.000796 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.349 | 0.010309 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.357 | 0.125 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.378 | 0.007299 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.385 | 0.004464 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.388 | 0.045455 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.4 | 0.002976 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.432 | 0.001266 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.449 | 0.022727 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.51 | 0.001718 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.528 | 0.004808 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.110.3 | 0.000718 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.142 | 0.002899 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.160.16 | 0.000929 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.162 | 0.005025 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.177.19 | 0.001431 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.177.43 | 0.001477 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.177.76 | 0.002494 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.177.82 | 0.000477 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.177.83 | 0.001481 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.206 | 0.000816 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.210 | 0.002132 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.235 | 0.002519 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.240 | 0.000216 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.248 | 0.029412 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.301 | 0.005917 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.349 | 0.000715 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.36.1 | 0.00114 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.378 | 0.006849 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.409 | 0.000781 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.425 | 0.002994 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.428 | 0.00102 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.433 | 0.003195 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.441 | 0.009615 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.452 | 0.013699 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.453 | 0.003236 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.456 | 0.003268 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.509 | 0.000866 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.510 | 0.026316 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.525 | 0.000113 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.551 | 0.00129 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.570 | 0.002941 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.576 | 0.000907 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.588 | 0.00091 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.609 | 0.000479 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | B.3 | 0.000831 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | C.1 | 0.002392 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | C.16 | 0.00106 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | C.23 | 0.005814 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | C.36.3 | 0.000567 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | N.5 | 0.001767 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | N.6 | 0.007092 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | P.1.16 | 0.000374 |
ORF3a | 78 | H78H | caC | caT | 1 | 1 | Z.1 | 0.00289 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|