CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = G100S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a100G100SnonsynGgcAgc106810650.99719125690-25692
ORF3a100G100SnonsynGGcTCc106820.0018726625690-25692
ORF3a100G100SnonsynGGCTCA106810.0009363325690-25692

Details of the mutation G100S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a100G100SGgcAgc10651068All0.000204
ORF3a100G100SGGcTCc21068All0
ORF3a100G100SGGCTCA11068All0
ORF3a100G100SGgcAgc491491AY.250.002953
ORF3a100G100SGgcAgc8585B.1.1.70.000076
ORF3a100G100SGgcAgc7575AY.40.000117
ORF3a100G100SGgcAgc2929AY.30.000288
ORF3a100G100SGgcAgc2929AY.46.60.002094
ORF3a100G100SGgcAgc2727AY.1030.000168
ORF3a100G100SGgcAgc2727AY.140.002376
ORF3a100G100SGgcAgc2222AY.440.000134
ORF3a100G100SGgcAgc1919B.1.617.20.000072
ORF3a100G100SGgcAgc1818B.1.20.000158
ORF3a100G100SGgcAgc1818R.10.00162
ORF3a100G100SGgcAgc1717AY.430.000075
ORF3a100G100SGgcAgc1717B.1.4290.0004
ORF3a100G100SGgcAgc1315B.10.000119
ORF3a100G100SGGCTCA115B.10.000009
ORF3a100G100SGGcTCc115B.10.000009
ORF3a100G100SGgcAgc1313AY.1190.000459
ORF3a100G100SGgcAgc1111B.1.3510.000327
ORF3a100G100SGgcAgc1010B.1.10.000181
ORF3a100G100SGgcAgc77B.1.4670.28
ORF3a100G100SGgcAgc66B.1.2400.001293
ORF3a100G100SGgcAgc55B.1.1.5190.000199
ORF3a100G100SGgcAgc55B.1.1600.000156
ORF3a100G100SGgcAgc55B.1.1770.000066
ORF3a100G100SGgcAgc55B.1.2580.000333
ORF3a100G100SGgcAgc44AY.1020.000106
ORF3a100G100SGgcAgc44AY.260.000113
ORF3a100G100SGgcAgc44AY.320.00213
ORF3a100G100SGgcAgc44AY.390.000099
ORF3a100G100SGgcAgc44AY.50.000083
ORF3a100G100SGgcAgc44B.1.5260.000094
ORF3a100G100SGgcAgc33AY.1000.000138
ORF3a100G100SGgcAgc33AY.200.000117
ORF3a100G100SGgcAgc33AY.470.000093
ORF3a100G100SGgcAgc33B.1.1.2530.007519
ORF3a100G100SGgcAgc33B.1.1.330.001263
ORF3a100G100SGgcAgc33B.1.2340.000396
ORF3a100G100SGgcAgc33B.1.4270.000151
ORF3a100G100SGgcAgc33P.10.000047
ORF3a100G100SGgcAgc220.111111
ORF3a100G100SGgcAgc22AY.1200.000074
ORF3a100G100SGgcAgc22AY.360.000296
ORF3a100G100SGgcAgc22AY.4.40.000818
ORF3a100G100SGgcAgc22AY.420.00008
ORF3a100G100SGgcAgc22AY.460.000208
ORF3a100G100SGgcAgc22AY.46.40.000329
ORF3a100G100SGgcAgc22AY.530.000575
ORF3a100G100SGgcAgc22AY.540.000191
ORF3a100G100SGgcAgc22AY.880.001768
ORF3a100G100SGgcAgc22AY.98.10.000097
ORF3a100G100SGgcAgc22B.1.177.150.001262
ORF3a100G100SGgcAgc22B.1.5160.003914
ORF3a100G100SGgcAgc11A.20.000662
ORF3a100G100SGgcAgc11AE.80.000489
ORF3a100G100SGgcAgc11AY.1170.000085
ORF3a100G100SGgcAgc11AY.230.00007
ORF3a100G100SGgcAgc11AY.290.000016
ORF3a100G100SGgcAgc11AY.3.10.000085
ORF3a100G100SGgcAgc11AY.300.000396
ORF3a100G100SGgcAgc11AY.330.000067
ORF3a100G100SGgcAgc11AY.4.20.000022
ORF3a100G100SGgcAgc11AY.7.10.000113
ORF3a100G100SGgcAgc11AY.710.000475
ORF3a100G100SGgcAgc11AY.780.001541
ORF3a100G100SGgcAgc11AY.9.20.000037
ORF3a100G100SGgcAgc11AY.920.000287
ORF3a100G100SGgcAgc11AY.990.001049
ORF3a100G100SGgcAgc11AY.99.20.000092
ORF3a100G100SGgcAgc11B.1.1.1340.011364
ORF3a100G100SGgcAgc11B.1.1.2220.000204
ORF3a100G100SGgcAgc11B.1.1.280.000311
ORF3a100G100SGgcAgc11B.1.1.3340.016393
ORF3a100G100SGgcAgc11B.1.1.3480.000796
ORF3a100G100SGgcAgc11B.1.1.390.00051
ORF3a100G100SGgcAgc11B.1.1.4250.045455
ORF3a100G100SGgcAgc11B.1.1.630.000386
ORF3a100G100SGgcAgc11B.1.177.620.001192
ORF3a100G100SGgcAgc11B.1.177.70.000165
ORF3a100G100SGgcAgc11B.1.2210.000071
ORF3a100G100SGgcAgc11B.1.36.290.000517
ORF3a100G100SGgcAgc11B.1.36.80.001
ORF3a100G100SGGcTCc11B.1.362.20.004717
ORF3a100G100SGgcAgc11B.1.3670.000792
ORF3a100G100SGgcAgc11B.1.4680.005714
ORF3a100G100SGgcAgc11B.1.6210.000089
ORF3a100G100SGgcAgc11B.1.910.002075
ORF3a100G100SGgcAgc11B.1.930.000934
ORF3a100G100SGgcAgc11C.360.000911
ORF3a100G100SGgcAgc11C.370.000116
ORF3a100G100SGgcAgc11Q.80.000165