CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = G100A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a100G100AnonsyngGcgCc26240.92307725690-25692
ORF3a100G100AnonsyngGCgCA2610.038461525690-25692
ORF3a100G100AnonsyngGCgCT2610.038461525690-25692

Details of the mutation G100A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a100G100AgGcgCc2426All0.000005
ORF3a100G100AgGCgCA126All0
ORF3a100G100AgGCgCT126All0
ORF3a100G100AgGcgCc66B.1.20.000053
ORF3a100G100AgGcgCc55AY.1160.001434
ORF3a100G100AgGcgCc22AY.9.10.000167
ORF3a100G100AgGCgCA12B.10.000009
ORF3a100G100AgGcgCc12B.10.000009
ORF3a100G100AgGCgCT12B.1.1.5190.00004
ORF3a100G100AgGcgCc12B.1.1.5190.00004
ORF3a100G100AgGcgCc22B.1.1.70.000002
ORF3a100G100AgGcgCc22B.1.5240.002813
ORF3a100G100AgGcgCc11B.1.10.000018
ORF3a100G100AgGcgCc11B.1.177.200.001517
ORF3a100G100AgGcgCc11B.1.2340.000132
ORF3a100G100AgGcgCc11B.1.5260.000024
ORF3a100G100AgGcgCc11B.1.5440.006024