CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = E19del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a19E19del2delgAAg--1561540.98717925447-25449
ORF3a19E19del2delGAA--N15610.0064102625447-25449
ORF3a19E19del2delGAa--a15610.0064102625447-25449

Details of the mutation E19del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a19E19del2gAAg--154156All0.000029
ORF3a19E19del2GAa--a1156All0
ORF3a19E19del2GAA--N1156All0
ORF3a19E19del2gAAg--104104B.1.617.30.310448
ORF3a19E19del2gAAg--3030B.1.214.20.017986
ORF3a19E19del2gAAg--1111AY.40.000017
ORF3a19E19del2gAAg--22AY.1020.000053
ORF3a19E19del2gAAg--22AY.440.000012
ORF3a19E19del2gAAg--11AY.490.003195
ORF3a19E19del2gAAg--11AY.540.000095
ORF3a19E19del2gAAg--11B.1.1.5280.004808
ORF3a19E19del2GAA--N11B.1.1.70.000001
ORF3a19E19del2GAa--a11B.1.160.230.004831
ORF3a19E19del2gAAg--11B.1.1770.000013
ORF3a19E19del2gAAg--11P.10.000016