CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = C148S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a148C148SnonsynTgcAgc71450.63380325834-25836
ORF3a148C148SnonsyntGctCc71260.36619725834-25836

Details of the mutation C148S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a148C148STgcAgc4571All0.000009
ORF3a148C148StGctCc2671All0.000005
ORF3a148C148StGctCc1313B.1.619.10.008339
ORF3a148C148STgcAgc1112B.1.1.70.00001
ORF3a148C148StGctCc112B.1.1.70.000001
ORF3a148C148STgcAgc88AY.40.000012
ORF3a148C148STgcAgc44AY.1030.000025
ORF3a148C148StGctCc33AY.590.001589
ORF3a148C148STgcAgc220.111111
ORF3a148C148STgcAgc22AY.1090.001479
ORF3a148C148StGctCc12AY.4.20.000022
ORF3a148C148STgcAgc12AY.4.20.000022
ORF3a148C148StGctCc12B.10.000009
ORF3a148C148STgcAgc12B.10.000009
ORF3a148C148StGctCc22B.1.10.000036
ORF3a148C148STgcAgc11AY.1180.000063
ORF3a148C148StGctCc11AY.1200.000037
ORF3a148C148STgcAgc11AY.250.000006
ORF3a148C148StGctCc11AY.260.000028
ORF3a148C148STgcAgc11AY.30.00001
ORF3a148C148STgcAgc11AY.610.000105
ORF3a148C148STgcAgc11AY.740.000116
ORF3a148C148STgcAgc11B.1.1.2910.000742
ORF3a148C148STgcAgc11B.1.1.950.019608
ORF3a148C148StGctCc11B.1.1600.000031
ORF3a148C148STgcAgc11B.1.177.600.000218
ORF3a148C148STgcAgc11B.1.177.860.000183
ORF3a148C148STgcAgc11B.1.20.000009
ORF3a148C148STgcAgc11B.1.2210.000071
ORF3a148C148STgcAgc11B.1.2360.002053
ORF3a148C148STgcAgc11B.1.4290.000024
ORF3a148C148STgcAgc11B.1.5260.000024
ORF3a148C148STgcAgc11B.1.5900.004545
ORF3a148C148STgcAgc11B.310.003731
ORF3a148C148StGctCc11C.180.002591
ORF3a148C148StGctCc11D.20.000075