CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = A72del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a72A72del1delgcAgc-420.525606-25608
ORF3a72A72del1delGca-ca410.2525606-25608
ORF3a72A72del1delGcA-cC410.2525606-25608

Details of the mutation A72del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a72A72del1gcAgc-24All0
ORF3a72A72del1Gca-ca14All0
ORF3a72A72del1GcA-cC14All0
ORF3a72A72del1GcA-cC12B.1.20.000009
ORF3a72A72del1gcAgc-12B.1.20.000009
ORF3a72A72del1Gca-ca11B.1.1.70.000001
ORF3a72A72del1gcAgc-11B.1.617.20.000004