CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = A72S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a72A72SnonsynGcaTca606860630.99917625606-25608
ORF3a72A72SnonsynGCAAGC606830.00049439725606-25608
ORF3a72A72SnonsynGcATcT606820.00032959825606-25608

Details of the mutation A72S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a72A72SGcaTca60636068All0.00116
ORF3a72A72SGCAAGC36068All0.000001
ORF3a72A72SGcATcT26068All0
ORF3a72A72SGcaTca27652765B.1.2580.184002
ORF3a72A72SGcaTca563563B.1.1.70.000504
ORF3a72A72SGcaTca445445B.1.3510.013228
ORF3a72A72SGcaTca329329B.1.160.140.697034
ORF3a72A72SGcaTca259259B.10.002372
ORF3a72A72SGcaTca245245AY.40.000381
ORF3a72A72SGcaTca124124B.1.617.20.000467
ORF3a72A72SGcaTca118118B.1.4290.002776
ORF3a72A72SGcaTca9090B.1.1511
ORF3a72A72SGcaTca7373AY.430.000323
ORF3a72A72SGcaTca7070AY.1030.000435
ORF3a72A72SGcaTca6868AY.1130.009682
ORF3a72A72SGcaTca6464B.1.1770.000843
ORF3a72A72SGcaTca5757B.1.10.001034
ORF3a72A72SGcaTca5151P.1.140.002438
ORF3a72A72SGcaTca5050AY.440.000304
ORF3a72A72SGcaTca4040B.1.1600.001248
ORF3a72A72SGcaTca3131B0.003962
ORF3a72A72SGcaTca3030AY.4.20.000651
ORF3a72A72SGcaTca2929AY.390.000717
ORF3a72A72SGcaTca2929B.1.20.000255
ORF3a72A72SGcaTca2727AY.1020.000716
ORF3a72A72SGcaTca2020P.10.000315
ORF3a72A72SGcaTca1919B.1.4270.000959
ORF3a72A72SGcaTca1818B.1.1.3330.019376
ORF3a72A72SGcaTca1616AY.260.000453
ORF3a72A72SGcaTca1515AY.250.00009
ORF3a72A72SGcaTca1515B.1.617.10.001934
ORF3a72A72SGcaTca1414AY.290.000221
ORF3a72A72SGcaTca1313AY.50.000268
ORF3a72A72SGcaTca1212AY.1190.000424
ORF3a72A72SGcaTca1111A0.004257
ORF3a72A72SGcaTca1010AY.160.003797
ORF3a72A72SGcaTca1010AY.30.000099
ORF3a72A72SGcaTca1010B.1.466.20.003912
ORF3a72A72SGcaTca88AY.1200.000297
ORF3a72A72SGcaTca88AY.230.000558
ORF3a72A72SGcaTca77AY.410.002058
ORF3a72A72SGcaTca260.111111
ORF3a72A72SGCAAGC260.111111
ORF3a72A72SGcATcT260.111111
ORF3a72A72SGcaTca66AY.200.000233
ORF3a72A72SGcaTca66AY.980.000474
ORF3a72A72SGcaTca66C.90.181818
ORF3a72A72SGcaTca55AY.140.00044
ORF3a72A72SGcaTca55AY.340.000485
ORF3a72A72SGcaTca55AY.360.000741
ORF3a72A72SGcaTca55B.1.5260.000118
ORF3a72A72SGcaTca55P.1.150.001162
ORF3a72A72SGcaTca44AY.450.000487
ORF3a72A72SGcaTca44AY.60.000165
ORF3a72A72SGcaTca44B.1.1.3970.009009
ORF3a72A72SGcaTca44B.1.2210.000284
ORF3a72A72SGcaTca44B.1.2430.000278
ORF3a72A72SGcaTca44B.1.258.210.031008
ORF3a72A72SGcaTca44B.1.360.000584
ORF3a72A72SGcaTca44B.1.4590.016327
ORF3a72A72SGcaTca44B.1.4690.01444
ORF3a72A72SGcaTca44B.1.6090.001918
ORF3a72A72SGcaTca44P.30.00638
ORF3a72A72SGcaTca33AY.1080.003308
ORF3a72A72SGcaTca33AY.270.000194
ORF3a72A72SGcaTca33AY.330.0002
ORF3a72A72SGcaTca33AY.46.50.000595
ORF3a72A72SGcaTca33AY.5.40.00083
ORF3a72A72SGcaTca33AY.750.000168
ORF3a72A72SGcaTca33AY.780.004622
ORF3a72A72SGcaTca33AY.9.20.00011
ORF3a72A72SGcaTca33B.1.1.2140.000166
ORF3a72A72SGcaTca33B.1.1.390.001529
ORF3a72A72SGcaTca33B.1.1390.002199
ORF3a72A72SGcaTca33B.1.177.120.000455
ORF3a72A72SGcaTca33B.1.2180.015464
ORF3a72A72SGcaTca33B.1.2220.005076
ORF3a72A72SGcaTca33B.1.258.110.001189
ORF3a72A72SGcaTca33B.1.3590.068182
ORF3a72A72SGcaTca33B.1.6210.000266
ORF3a72A72SGcaTca33B.260.044118
ORF3a72A72SGcaTca33C.370.000348
ORF3a72A72SGcaTca33P.1.70.000958
ORF3a72A72SGcaTca22A.20.001324
ORF3a72A72SGcaTca22A.23.10.001408
ORF3a72A72SGcaTca22A.290.010638
ORF3a72A72SGcaTca22AD.20.000438
ORF3a72A72SGcaTca22AY.10.000791
ORF3a72A72SGcaTca22AY.100.00106
ORF3a72A72SGcaTca22AY.1170.000169
ORF3a72A72SGcaTca22AY.29.10.000441
ORF3a72A72SGcaTca22AY.4.50.000215
ORF3a72A72SGcaTca22AY.460.000208
ORF3a72A72SGcaTca22AY.590.001059
ORF3a72A72SGcaTca22AY.610.00021
ORF3a72A72SGcaTca22AY.7.10.000225
ORF3a72A72SGcaTca22AY.710.00095
ORF3a72A72SGcaTca22AY.98.10.000097
ORF3a72A72SGcaTca22AY.990.002099
ORF3a72A72SGcaTca22B.1.1.1530.002191
ORF3a72A72SGcaTca22B.1.1.1700.002494
ORF3a72A72SGcaTca22B.1.1.2040.006079
ORF3a72A72SGcaTca22B.1.1.280.000622
ORF3a72A72SGcaTca22B.1.1.3060.000877
ORF3a72A72SGcaTca22B.1.1.3180.000604
ORF3a72A72SGcaTca22B.1.1.3750.02381
ORF3a72A72SGcaTca22B.1.1.4200.002012
ORF3a72A72SGcaTca22B.1.1.4340.000697
ORF3a72A72SGcaTca22B.1.1.500.001358
ORF3a72A72SGcaTca22B.1.1.700.000682
ORF3a72A72SGcaTca22B.1.160.300.005952
ORF3a72A72SGcaTca22B.1.177.600.000437
ORF3a72A72SGcaTca22B.1.258.20.009009
ORF3a72A72SGcaTca22B.1.351.20.000605
ORF3a72A72SGcaTca22B.1.36.290.001035
ORF3a72A72SGcaTca22B.1.3690.00057
ORF3a72A72SGcaTca22B.1.5250.000226
ORF3a72A72SGcaTca22Q.10.000253
ORF3a72A72SGcaTca11A.10.000282
ORF3a72A72SGcaTca11A.210.00277
ORF3a72A72SGcaTca11AY.1160.000287
ORF3a72A72SGcaTca11AY.1180.000063
ORF3a72A72SGcaTca11AY.120.000316
ORF3a72A72SGcaTca11AY.1210.000135
ORF3a72A72SGcaTca11AY.240.000431
ORF3a72A72SGcaTca11AY.3.10.000085
ORF3a72A72SGcaTca11AY.39.10.00004
ORF3a72A72SGcaTca11AY.400.000964
ORF3a72A72SGcaTca11AY.420.00004
ORF3a72A72SGcaTca11AY.46.30.000934
ORF3a72A72SGcaTca11AY.470.000031
ORF3a72A72SGcaTca11AY.490.003195
ORF3a72A72SGcaTca11AY.530.000288
ORF3a72A72SGcaTca11AY.550.000917
ORF3a72A72SGcaTca11AY.680.000274
ORF3a72A72SGcaTca11AY.770.001127
ORF3a72A72SGcaTca11AY.90.000068
ORF3a72A72SGcaTca11AY.9.10.000084
ORF3a72A72SGcaTca11AY.900.000684
ORF3a72A72SGcaTca11AY.920.000287
ORF3a72A72SGcaTca11AY.99.20.000092
ORF3a72A72SGcaTca11B.1.1.10.000327
ORF3a72A72SGCAAGC11B.1.1.1390.022727
ORF3a72A72SGcaTca11B.1.1.1740.003378
ORF3a72A72SGcaTca11B.1.1.1890.001513
ORF3a72A72SGcaTca11B.1.1.2160.00089
ORF3a72A72SGcaTca11B.1.1.2220.000204
ORF3a72A72SGcaTca11B.1.1.2410.00207
ORF3a72A72SGcaTca11B.1.1.250.000569
ORF3a72A72SGcaTca11B.1.1.3010.001179
ORF3a72A72SGcaTca11B.1.1.4640.001473
ORF3a72A72SGcaTca11B.1.1.5190.00004
ORF3a72A72SGcaTca11B.1.1270.002198
ORF3a72A72SGcaTca11B.1.1570.002985
ORF3a72A72SGcaTca11B.1.160.160.000929
ORF3a72A72SGcaTca11B.1.160.230.004831
ORF3a72A72SGcaTca11B.1.160.290.004219
ORF3a72A72SGcaTca11B.1.177.160.000664
ORF3a72A72SGcaTca11B.1.177.170.000821
ORF3a72A72SGcaTca11B.1.177.440.000519
ORF3a72A72SGcaTca11B.1.177.60.000977
ORF3a72A72SGcaTca11B.1.177.750.001041
ORF3a72A72SGcaTca11B.1.177.860.000183
ORF3a72A72SGcaTca11B.1.2100.002132
ORF3a72A72SGcaTca11B.1.2350.002519
ORF3a72A72SGcaTca11B.1.258.120.007874
ORF3a72A72SGcaTca11B.1.258.140.00098
ORF3a72A72SGcaTca11B.1.258.150.018868
ORF3a72A72SGcaTca11B.1.258.30.001675
ORF3a72A72SGcaTca11B.1.2840.013158
ORF3a72A72SGcaTca11B.1.2930.0125
ORF3a72A72SGcaTca11B.1.3260.007576
ORF3a72A72SGcaTca11B.1.3290.000608
ORF3a72A72SGcaTca11B.1.3490.000715
ORF3a72A72SGcaTca11B.1.36.270.000763
ORF3a72A72SGcaTca11B.1.36.350.002604
ORF3a72A72SGcaTca11B.1.3750.00082
ORF3a72A72SGcaTca11B.1.400.019608
ORF3a72A72SGcaTca11B.1.416.10.001563
ORF3a72A72SGcaTca11B.1.4370.020833
ORF3a72A72SGcaTca11B.1.4730.019231
ORF3a72A72SGcaTca11B.1.4990.00105
ORF3a72A72SGcaTca11B.1.5160.001957
ORF3a72A72SGcaTca11B.1.5270.003704
ORF3a72A72SGcaTca11B.1.5680.001111
ORF3a72A72SGcaTca11B.1.575.10.002439
ORF3a72A72SGcaTca11B.1.6250.002353
ORF3a72A72SGcaTca11B.1.6270.00202
ORF3a72A72SGcaTca11B.1.6320.006711
ORF3a72A72SGcaTca11B.1.780.008547
ORF3a72A72SGcaTca11B.1.940.027027
ORF3a72A72SGcaTca11B.3.10.001658
ORF3a72A72SGcaTca11C.1.20.004255
ORF3a72A72SGcaTca11D.20.000075
ORF3a72A72SGcaTca11K.10.02381
ORF3a72A72SGcaTca11P.1.120.000484
ORF3a72A72SGcaTca11P.20.000187
ORF3a72A72SGcaTca11Q.70.001111
ORF3a72A72SGcaTca11Q.80.000165
ORF3a72A72SGcaTca11R.10.00009