CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF3a | 23 | A23S | nonsyn | Gct | Tct | 7200 | 7197 | 0.999583 | 25459-25461 | |
ORF3a | 23 | A23S | nonsyn | GcT | TcC | 7200 | 3 | 0.000416667 | 25459-25461 |
Details of the mutation A23S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF3a | 23 | A23S | Gct | Tct | 7197 | 7200 | All | 0.001377 |
ORF3a | 23 | A23S | GcT | TcC | 3 | 7200 | All | 0.000001 |
ORF3a | 23 | A23S | Gct | Tct | 1348 | 1348 | AY.9 | 0.091118 |
ORF3a | 23 | A23S | Gct | Tct | 831 | 831 | B.1.1.7 | 0.000744 |
ORF3a | 23 | A23S | Gct | Tct | 393 | 393 | B.1.617.2 | 0.00148 |
ORF3a | 23 | A23S | Gct | Tct | 375 | 378 | AY.4 | 0.000584 |
ORF3a | 23 | A23S | GcT | TcC | 3 | 378 | AY.4 | 0.000005 |
ORF3a | 23 | A23S | Gct | Tct | 344 | 344 | AY.46 | 0.035803 |
ORF3a | 23 | A23S | Gct | Tct | 243 | 243 | B.1.177.80 | 0.464627 |
ORF3a | 23 | A23S | Gct | Tct | 225 | 225 | B.1.2 | 0.001981 |
ORF3a | 23 | A23S | Gct | Tct | 222 | 222 | B.1.1.385 | 0.991071 |
ORF3a | 23 | A23S | Gct | Tct | 199 | 199 | AY.88 | 0.17595 |
ORF3a | 23 | A23S | Gct | Tct | 188 | 188 | AY.43 | 0.000833 |
ORF3a | 23 | A23S | Gct | Tct | 186 | 186 | B.1 | 0.001704 |
ORF3a | 23 | A23S | Gct | Tct | 163 | 163 | B.1.243 | 0.011342 |
ORF3a | 23 | A23S | Gct | Tct | 161 | 161 | AY.44 | 0.00098 |
ORF3a | 23 | A23S | Gct | Tct | 153 | 153 | AY.98.1 | 0.00741 |
ORF3a | 23 | A23S | Gct | Tct | 125 | 125 | AY.25 | 0.000752 |
ORF3a | 23 | A23S | Gct | Tct | 117 | 117 | AY.60 | 0.109756 |
ORF3a | 23 | A23S | Gct | Tct | 116 | 116 | AY.3 | 0.001154 |
ORF3a | 23 | A23S | Gct | Tct | 81 | 81 | AY.120 | 0.003011 |
ORF3a | 23 | A23S | Gct | Tct | 79 | 79 | AY.102 | 0.002095 |
ORF3a | 23 | A23S | Gct | Tct | 74 | 74 | B.1.1 | 0.001342 |
ORF3a | 23 | A23S | Gct | Tct | 70 | 70 | B.1.1.129 | 0.642202 |
ORF3a | 23 | A23S | Gct | Tct | 68 | 68 | B.1.142 | 0.197101 |
ORF3a | 23 | A23S | Gct | Tct | 66 | 66 | AY.103 | 0.00041 |
ORF3a | 23 | A23S | Gct | Tct | 66 | 66 | B.1.177 | 0.000869 |
ORF3a | 23 | A23S | Gct | Tct | 54 | 54 | B.1.221 | 0.003836 |
ORF3a | 23 | A23S | Gct | Tct | 51 | 51 | P.3 | 0.08134 |
ORF3a | 23 | A23S | Gct | Tct | 45 | 45 | AY.46.4 | 0.007403 |
ORF3a | 23 | A23S | Gct | Tct | 43 | 43 | B.1.575 | 0.013046 |
ORF3a | 23 | A23S | Gct | Tct | 39 | 39 | B.1.1.384 | 0.928571 |
ORF3a | 23 | A23S | Gct | Tct | 38 | 38 | P.1 | 0.000599 |
ORF3a | 23 | A23S | Gct | Tct | 34 | 34 | B.1.1.301 | 0.040094 |
ORF3a | 23 | A23S | Gct | Tct | 32 | 32 | AY.33 | 0.002137 |
ORF3a | 23 | A23S | Gct | Tct | 31 | 31 | AY.26 | 0.000878 |
ORF3a | 23 | A23S | Gct | Tct | 31 | 31 | AY.4.2 | 0.000672 |
ORF3a | 23 | A23S | Gct | Tct | 26 | 26 | B.1.1.306 | 0.011399 |
ORF3a | 23 | A23S | Gct | Tct | 26 | 26 | B.1.526 | 0.000611 |
ORF3a | 23 | A23S | Gct | Tct | 25 | 25 | B.1.351 | 0.000743 |
ORF3a | 23 | A23S | Gct | Tct | 24 | 24 | B.1.177.81 | 0.004544 |
ORF3a | 23 | A23S | Gct | Tct | 24 | 24 | B.1.221.3 | 0.02 |
ORF3a | 23 | A23S | Gct | Tct | 23 | 23 | B.1.1.519 | 0.000913 |
ORF3a | 23 | A23S | Gct | Tct | 22 | 22 | AY.39 | 0.000544 |
ORF3a | 23 | A23S | Gct | Tct | 22 | 22 | AY.4.5 | 0.002365 |
ORF3a | 23 | A23S | Gct | Tct | 22 | 22 | AY.47 | 0.000684 |
ORF3a | 23 | A23S | Gct | Tct | 21 | 21 | B.1.160 | 0.000655 |
ORF3a | 23 | A23S | Gct | Tct | 20 | 20 | B.1.258 | 0.001331 |
ORF3a | 23 | A23S | Gct | Tct | 20 | 20 | B.1.429 | 0.000471 |
ORF3a | 23 | A23S | Gct | Tct | 20 | 20 | B.1.442 | 0.714286 |
ORF3a | 23 | A23S | Gct | Tct | 18 | 18 | AY.20 | 0.0007 |
ORF3a | 23 | A23S | Gct | Tct | 15 | 15 | AY.32 | 0.007987 |
ORF3a | 23 | A23S | Gct | Tct | 15 | 15 | B.1.177.32 | 0.020243 |
ORF3a | 23 | A23S | Gct | Tct | 14 | 14 | B | 0.001789 |
ORF3a | 23 | A23S | Gct | Tct | 13 | 13 | AY.100 | 0.000598 |
ORF3a | 23 | A23S | Gct | Tct | 13 | 13 | AY.117 | 0.001099 |
ORF3a | 23 | A23S | Gct | Tct | 13 | 13 | AY.6 | 0.000535 |
ORF3a | 23 | A23S | Gct | Tct | 13 | 13 | B.1.1.284 | 0.001396 |
ORF3a | 23 | A23S | Gct | Tct | 13 | 13 | C.37 | 0.001509 |
ORF3a | 23 | A23S | Gct | Tct | 12 | 12 | AY.54 | 0.001144 |
ORF3a | 23 | A23S | Gct | Tct | 11 | 11 | AY.2 | 0.003917 |
ORF3a | 23 | A23S | Gct | Tct | 11 | 11 | AY.23 | 0.000767 |
ORF3a | 23 | A23S | Gct | Tct | 11 | 11 | AY.61 | 0.001153 |
ORF3a | 23 | A23S | Gct | Tct | 10 | 10 | AY.75 | 0.00056 |
ORF3a | 23 | A23S | Gct | Tct | 10 | 10 | B.1.188 | 0.166667 |
ORF3a | 23 | A23S | Gct | Tct | 10 | 10 | B.1.36 | 0.001459 |
ORF3a | 23 | A23S | Gct | Tct | 10 | 10 | B.1.617.1 | 0.00129 |
ORF3a | 23 | A23S | Gct | Tct | 9 | 9 | AY.75.1 | 0.001623 |
ORF3a | 23 | A23S | Gct | Tct | 9 | 9 | B.1.177.86 | 0.001651 |
ORF3a | 23 | A23S | Gct | Tct | 8 | 8 | AY.116 | 0.002294 |
ORF3a | 23 | A23S | Gct | Tct | 8 | 8 | AY.119 | 0.000282 |
ORF3a | 23 | A23S | Gct | Tct | 8 | 8 | AY.29 | 0.000126 |
ORF3a | 23 | A23S | Gct | Tct | 8 | 8 | AY.45 | 0.000973 |
ORF3a | 23 | A23S | Gct | Tct | 8 | 8 | P.1.17 | 0.001294 |
ORF3a | 23 | A23S | Gct | Tct | 7 | 7 | A.27 | 0.011589 |
ORF3a | 23 | A23S | Gct | Tct | 7 | 7 | AY.106 | 0.002344 |
ORF3a | 23 | A23S | Gct | Tct | 7 | 7 | AY.36 | 0.001037 |
ORF3a | 23 | A23S | Gct | Tct | 7 | 7 | AY.42 | 0.000282 |
ORF3a | 23 | A23S | Gct | Tct | 7 | 7 | AY.5 | 0.000145 |
ORF3a | 23 | A23S | Gct | Tct | 7 | 7 | B.1.1.220 | 0.013011 |
ORF3a | 23 | A23S | Gct | Tct | 7 | 7 | B.1.1.521 | 0.037433 |
ORF3a | 23 | A23S | Gct | Tct | 7 | 7 | B.1.36.29 | 0.003621 |
ORF3a | 23 | A23S | Gct | Tct | 6 | 6 | AY.65 | 0.003198 |
ORF3a | 23 | A23S | Gct | Tct | 6 | 6 | AY.70 | 0.001251 |
ORF3a | 23 | A23S | Gct | Tct | 6 | 6 | B.1.396 | 0.004234 |
ORF3a | 23 | A23S | Gct | Tct | 6 | 6 | B.1.525 | 0.000679 |
ORF3a | 23 | A23S | Gct | Tct | 6 | 6 | P.1.14 | 0.000287 |
ORF3a | 23 | A23S | Gct | Tct | 5 | 5 | AY.13 | 0.000805 |
ORF3a | 23 | A23S | Gct | Tct | 5 | 5 | AY.35 | 0.001165 |
ORF3a | 23 | A23S | Gct | Tct | 5 | 5 | AY.9.2 | 0.000184 |
ORF3a | 23 | A23S | Gct | Tct | 5 | 5 | B.1.1.174 | 0.016892 |
ORF3a | 23 | A23S | Gct | Tct | 5 | 5 | B.1.1.318 | 0.001509 |
ORF3a | 23 | A23S | Gct | Tct | 5 | 5 | B.1.427 | 0.000252 |
ORF3a | 23 | A23S | Gct | Tct | 5 | 5 | B.1.466.2 | 0.001956 |
ORF3a | 23 | A23S | Gct | Tct | 4 | 4 | AY.110 | 0.000451 |
ORF3a | 23 | A23S | Gct | Tct | 4 | 4 | AY.121 | 0.000541 |
ORF3a | 23 | A23S | Gct | Tct | 4 | 4 | AY.50 | 0.003197 |
ORF3a | 23 | A23S | Gct | Tct | 4 | 4 | AY.55 | 0.00367 |
ORF3a | 23 | A23S | Gct | Tct | 4 | 4 | AY.69 | 0.000747 |
ORF3a | 23 | A23S | Gct | Tct | 4 | 4 | AY.92 | 0.001149 |
ORF3a | 23 | A23S | Gct | Tct | 4 | 4 | B.1.637 | 0.000292 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | AY.29.1 | 0.000662 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | AY.34 | 0.000291 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | AY.37 | 0.000948 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | AY.38 | 0.001498 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | AY.46.2 | 0.001906 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | AY.5.4 | 0.00083 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | AY.57 | 0.001969 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | AY.84 | 0.001312 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | AY.9.1 | 0.000251 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | AY.98 | 0.000237 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | B.1.1.214 | 0.000166 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | B.1.1.362 | 0.016854 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | D.2 | 0.000225 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | Q.1 | 0.000379 |
ORF3a | 23 | A23S | Gct | Tct | 3 | 3 | Q.8 | 0.000495 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | A.2.5 | 0.000998 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.118 | 0.000125 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.120.2 | 0.002571 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.16.1 | 0.00094 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.27 | 0.000129 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.3.1 | 0.000171 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.46.5 | 0.000397 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.58 | 0.001815 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.63 | 0.000774 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.64 | 0.00119 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.68 | 0.000547 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | AY.99.2 | 0.000184 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.1.1 | 0.000653 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.1.261 | 0.017241 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.1.33 | 0.000842 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.1.37 | 0.000386 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.1.50 | 0.001358 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.177.33 | 0.003289 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.199 | 0.008264 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.234 | 0.000264 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.398 | 0.005952 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.497 | 0.00063 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.565 | 0.001621 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.620 | 0.001892 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | B.1.621 | 0.000177 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | P.2 | 0.000373 |
ORF3a | 23 | A23S | Gct | Tct | 2 | 2 | P.4 | 0.007605 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | A | 0.000387 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | A.11 | 0.058824 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | A.25 | 0.018182 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AV.1 | 0.005051 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.1 | 0.000396 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.10 | 0.00053 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.108 | 0.001103 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.109 | 0.00074 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.11 | 0.001339 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.113 | 0.000142 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.14 | 0.000088 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.23.1 | 0.000417 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.39.1 | 0.00004 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.46.1 | 0.001027 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.52 | 0.000814 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.53 | 0.000288 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.59 | 0.00053 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.67 | 0.000464 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.7 | 0.000196 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.7.2 | 0.000559 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.73 | 0.000665 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.74 | 0.000116 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.78 | 0.001541 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.8 | 0.000606 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.89 | 0.004902 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.91 | 0.00073 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.95 | 0.000761 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | AY.96 | 0.002075 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.204 | 0.00304 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.216 | 0.00089 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.222 | 0.000204 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.237 | 0.005405 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.25 | 0.000569 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.255 | 0.00303 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.263 | 0.001558 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.28 | 0.000311 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.294 | 0.001266 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.302 | 0.002075 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.305 | 0.003861 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.348 | 0.000796 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.369 | 0.000446 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.372 | 0.000689 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.39 | 0.00051 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.409 | 0.002833 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.432 | 0.001266 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.434 | 0.000349 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.437 | 0.010417 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.485 | 0.016667 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.5 | 0.008333 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.51 | 0.001718 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.1.52 | 0.012195 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.158 | 0.02381 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.177.12 | 0.000152 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.177.21 | 0.000076 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.177.24 | 0.001295 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.177.6 | 0.000977 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.177.73 | 0.000566 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.177.8 | 0.000752 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.177.9 | 0.001332 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.201 | 0.005682 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.232 | 0.000537 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.240 | 0.000216 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.241 | 0.000812 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.258.17 | 0.000104 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.349 | 0.000715 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.36.17 | 0.000494 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.36.36 | 0.000602 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.36.8 | 0.001 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.367 | 0.000792 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.369 | 0.000285 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.399 | 0.001934 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.404 | 0.001302 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.411 | 0.003704 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.416 | 0.001269 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.471 | 0.002732 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.499 | 0.00105 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.527 | 0.003704 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.530 | 0.007143 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.541 | 0.004425 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.564 | 0.000426 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.596 | 0.000087 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.609 | 0.000479 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.617.3 | 0.002985 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.621.1 | 0.000506 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.1.634 | 0.003425 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.3 | 0.000831 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.3.1 | 0.001658 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | B.6.6 | 0.000889 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | C.36.3.1 | 0.002717 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | Q.4 | 0.000455 |
ORF3a | 23 | A23S | Gct | Tct | 1 | 1 | Z.1 | 0.00289 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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