CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = A23A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a23A23AsyngcTgcC196817130.87042725459-25461
ORF3a23A23AsyngcTgcA19682330.11839425459-25461
ORF3a23A23AsyngcTgcG1968220.011178925459-25461

Details of the mutation A23A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a23A23AgcTgcC17131968All0.000328
ORF3a23A23AgcTgcA2331968All0.000045
ORF3a23A23AgcTgcG221968All0.000004
ORF3a23A23AgcTgcC335340B.1.1.70.0003
ORF3a23A23AgcTgcA5340B.1.1.70.000004
ORF3a23A23AgcTgcC252255AY.440.001534
ORF3a23A23AgcTgcA3255AY.440.000018
ORF3a23A23AgcTgcC210231AY.40.000327
ORF3a23A23AgcTgcG21231AY.40.000033
ORF3a23A23AgcTgcA114227B.1.617.20.000429
ORF3a23A23AgcTgcC113227B.1.617.20.000425
ORF3a23A23AgcTgcC163165AY.200.006335
ORF3a23A23AgcTgcA2165AY.200.000078
ORF3a23A23AgcTgcC149149B.1.20.001312
ORF3a23A23AgcTgcA5660AY.1020.001485
ORF3a23A23AgcTgcC460AY.1020.000106
ORF3a23A23AgcTgcC4848AY.250.000289
ORF3a23A23AgcTgcC4545AU.20.108959
ORF3a23A23AgcTgcC3435AY.1200.001264
ORF3a23A23AgcTgcA135AY.1200.000037
ORF3a23A23AgcTgcC2829AY.1030.000174
ORF3a23A23AgcTgcA129AY.1030.000006
ORF3a23A23AgcTgcC2529AY.390.000618
ORF3a23A23AgcTgcA429AY.390.000099
ORF3a23A23AgcTgcC2929AY.50.000599
ORF3a23A23AgcTgcC918AY.430.00004
ORF3a23A23AgcTgcA918AY.430.00004
ORF3a23A23AgcTgcC1717B.1.1770.000224
ORF3a23A23AgcTgcC1315AY.1170.001099
ORF3a23A23AgcTgcA215AY.1170.000169
ORF3a23A23AgcTgcC1515AY.300.005936
ORF3a23A23AgcTgcC1313C.380.104839
ORF3a23A23AgcTgcC1313P.10.000205
ORF3a23A23AgcTgcC1212B.1.3510.000357
ORF3a23A23AgcTgcC710AY.30.00007
ORF3a23A23AgcTgcA310AY.30.00003
ORF3a23A23AgcTgcC1010AY.4.20.000217
ORF3a23A23AgcTgcA1010B.1.2430.000696
ORF3a23A23AgcTgcC1010B.1.4290.000235
ORF3a23A23AgcTgcC47AY.3.10.000341
ORF3a23A23AgcTgcA37AY.3.10.000256
ORF3a23A23AgcTgcC77AY.780.010786
ORF3a23A23AgcTgcC77B.1.6210.00062
ORF3a23A23AgcTgcC77B.1.6370.000512
ORF3a23A23AgcTgcC55AY.290.000079
ORF3a23A23AgcTgcC55AY.610.000524
ORF3a23A23AgcTgcC35B.1.10.000054
ORF3a23A23AgcTgcA25B.1.10.000036
ORF3a23A23AgcTgcC55B.40.011038
ORF3a23A23AgcTgcC55Q.70.005556
ORF3a23A23AgcTgcC44AY.1000.000184
ORF3a23A23AgcTgcC44AY.1080.00441
ORF3a23A23AgcTgcC44AY.4.40.001637
ORF3a23A23AgcTgcC44AY.450.000487
ORF3a23A23AgcTgcA34AY.460.000312
ORF3a23A23AgcTgcC14AY.460.000104
ORF3a23A23AgcTgcC44AY.970.006803
ORF3a23A23AgcTgcC44B.1.2580.000266
ORF3a23A23AgcTgcC44R.10.00036
ORF3a23A23AgcTgcC33AY.1190.000106
ORF3a23A23AgcTgcC33AY.320.001597
ORF3a23A23AgcTgcA33AY.4.2.10.000447
ORF3a23A23AgcTgcC33AY.920.000862
ORF3a23A23AgcTgcC33AY.99.20.000276
ORF3a23A23AgcTgcC33B.10.000027
ORF3a23A23AgcTgcC23B.1.1.2220.000408
ORF3a23A23AgcTgcA13B.1.1.2220.000204
ORF3a23A23AgcTgcC33C.360.002732
ORF3a23A23AgcTgcC22AY.1050.001286
ORF3a23A23AgcTgcC22AY.1160.000574
ORF3a23A23AgcTgcC22AY.130.000322
ORF3a23A23AgcTgcC22AY.230.000139
ORF3a23A23AgcTgcC22AY.260.000057
ORF3a23A23AgcTgcC22AY.4.50.000215
ORF3a23A23AgcTgcC22AY.46.30.001867
ORF3a23A23AgcTgcC12AY.46.60.000072
ORF3a23A23AgcTgcA12AY.46.60.000072
ORF3a23A23AgcTgcC22AY.810.003984
ORF3a23A23AgcTgcA22AY.9.20.000073
ORF3a23A23AgcTgcC22B.1.1.280.000622
ORF3a23A23AgcTgcC22B.1.2400.000431
ORF3a23A23AgcTgcC22B.1.3130.013158
ORF3a23A23AgcTgcC22B.1.4270.000101
ORF3a23A23AgcTgcC22B.1.617.10.000258
ORF3a23A23AgcTgcC11A.2.5.20.001572
ORF3a23A23AgcTgcC11AD.20.000219
ORF3a23A23AgcTgcC11AY.10.000396
ORF3a23A23AgcTgcC11AY.1130.000142
ORF3a23A23AgcTgcC11AY.160.00038
ORF3a23A23AgcTgcC11AY.16.10.00047
ORF3a23A23AgcTgcA11AY.340.000097
ORF3a23A23AgcTgcC11AY.380.000499
ORF3a23A23AgcTgcA11AY.39.10.00004
ORF3a23A23AgcTgcC11AY.470.000031
ORF3a23A23AgcTgcC11AY.540.000095
ORF3a23A23AgcTgcC11AY.550.000917
ORF3a23A23AgcTgcC11AY.650.000533
ORF3a23A23AgcTgcC11AY.700.000209
ORF3a23A23AgcTgcC11AY.750.000056
ORF3a23A23AgcTgcA11AY.860.00083
ORF3a23A23AgcTgcC11AY.90.000068
ORF3a23A23AgcTgcC11AY.950.000761
ORF3a23A23AgcTgcC11AY.980.000079
ORF3a23A23AgcTgcC11B0.000128
ORF3a23A23AgcTgcC11B.1.1.100.001115
ORF3a23A23AgcTgcG11B.1.1.1940.00495
ORF3a23A23AgcTgcC11B.1.1.2140.000055
ORF3a23A23AgcTgcC11B.1.1.2370.005405
ORF3a23A23AgcTgcC11B.1.1.310.066667
ORF3a23A23AgcTgcA11B.1.1.3180.000302
ORF3a23A23AgcTgcA11B.1.1600.000031
ORF3a23A23AgcTgcC11B.1.177.80.000752
ORF3a23A23AgcTgcC11B.1.177.810.000189
ORF3a23A23AgcTgcC11B.1.2210.000071
ORF3a23A23AgcTgcC11B.1.258.170.000104
ORF3a23A23AgcTgcA11B.1.351.20.000303
ORF3a23A23AgcTgcA11B.1.3690.000285
ORF3a23A23AgcTgcC11B.1.4040.001302
ORF3a23A23AgcTgcC11B.1.5240.001406
ORF3a23A23AgcTgcC11B.1.5250.000113
ORF3a23A23AgcTgcC11B.1.5430.01
ORF3a23A23AgcTgcC11B.1.5960.000087
ORF3a23A23AgcTgcC11B.1.6250.002353
ORF3a23A23AgcTgcC11B.4.70.010101
ORF3a23A23AgcTgcC11C.36.30.000567
ORF3a23A23AgcTgcA11P.1.140.000048
ORF3a23A23AgcTgcC11P.1.150.000232
ORF3a23A23AgcTgcC11P.1.70.000319