CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = A143S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a143A143SnonsynGccTcc111411120.99820525819-25821
ORF3a143A143SnonsynGcCTcA111420.0017953325819-25821

Details of the mutation A143S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a143A143SGccTcc11121114All0.000213
ORF3a143A143SGcCTcA21114All0
ORF3a143A143SGccTcc423423B.1.1.2070.5
ORF3a143A143SGccTcc186186B.1.2580.012378
ORF3a143A143SGccTcc166166AY.250.000998
ORF3a143A143SGccTcc9595B.1.1.3620.533708
ORF3a143A143SGccTcc4243B.1.1.70.000038
ORF3a143A143SGcCTcA143B.1.1.70.000001
ORF3a143A143SGccTcc4242B.1.617.20.000158
ORF3a143A143SGccTcc2424AY.430.000106
ORF3a143A143SGccTcc1717AY.1000.000782
ORF3a143A143SGccTcc1212AY.40.000019
ORF3a143A143SGccTcc1111B.1.1.1890.016641
ORF3a143A143SGccTcc99B.10.000082
ORF3a143A143SGccTcc77AY.440.000043
ORF3a143A143SGccTcc66AY.30.00006
ORF3a143A143SGccTcc66AY.3.10.000512
ORF3a143A143SGccTcc45B.1.10.000073
ORF3a143A143SGcCTcA15B.1.10.000018
ORF3a143A143SGccTcc55B.1.466.20.001956
ORF3a143A143SGccTcc44AY.290.000063
ORF3a143A143SGccTcc44B.1.1.2940.005063
ORF3a143A143SGccTcc33AY.1030.000019
ORF3a143A143SGccTcc33AY.330.0002
ORF3a143A143SGccTcc22AY.640.00119
ORF3a143A143SGccTcc22B.1.1.2770.001517
ORF3a143A143SGccTcc22B.1.20.000018
ORF3a143A143SGccTcc22B.1.2340.000264
ORF3a143A143SGccTcc22B.1.360.000292
ORF3a143A143SGccTcc22B.1.6090.000959
ORF3a143A143SGccTcc11AE.80.000489
ORF3a143A143SGccTcc11AY.1020.000027
ORF3a143A143SGccTcc11AY.1180.000063
ORF3a143A143SGccTcc11AY.230.00007
ORF3a143A143SGccTcc11AY.390.000025
ORF3a143A143SGccTcc11AY.4.30.000842
ORF3a143A143SGccTcc11AY.400.000964
ORF3a143A143SGccTcc11AY.46.10.001027
ORF3a143A143SGccTcc11AY.50.000021
ORF3a143A143SGccTcc11AY.620.000436
ORF3a143A143SGccTcc11AY.750.000056
ORF3a143A143SGccTcc11AY.810.001992
ORF3a143A143SGccTcc11AY.9.10.000084
ORF3a143A143SGccTcc11B.1.1.1980.001468
ORF3a143A143SGccTcc11B.1.1.2140.000055
ORF3a143A143SGccTcc11B.1.1.390.00051
ORF3a143A143SGccTcc11B.1.1.460.004367
ORF3a143A143SGccTcc11B.1.1.5190.00004
ORF3a143A143SGccTcc11B.1.160.150.00495
ORF3a143A143SGccTcc11B.1.177.600.000218
ORF3a143A143SGccTcc11B.1.177.890.02439
ORF3a143A143SGccTcc11B.1.2430.00007
ORF3a143A143SGccTcc11B.1.258.110.000396
ORF3a143A143SGccTcc11B.1.258.120.007874
ORF3a143A143SGccTcc11B.1.36.100.004785
ORF3a143A143SGccTcc11B.1.36.80.001
ORF3a143A143SGccTcc11B.1.438.10.000107
ORF3a143A143SGccTcc11B.1.4990.00105
ORF3a143A143SGccTcc11B.1.5510.00129
ORF3a143A143SGccTcc11B.1.5650.00081
ORF3a143A143SGccTcc11R.10.00009