CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = A143A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a143A143AsyngcCgcT157014760.94012725819-25821
ORF3a143A143AsyngcCgcA1570780.049681525819-25821
ORF3a143A143AsyngcCgcG1570160.010191125819-25821

Details of the mutation A143A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a143A143AgcCgcT14761570All0.000282
ORF3a143A143AgcCgcA781570All0.000015
ORF3a143A143AgcCgcG161570All0.000003
ORF3a143A143AgcCgcT756757AY.440.004602
ORF3a143A143AgcCgcA1757AY.440.000006
ORF3a143A143AgcCgcT129139B.1.1.70.000115
ORF3a143A143AgcCgcA10139B.1.1.70.000009
ORF3a143A143AgcCgcT129137AY.40.000201
ORF3a143A143AgcCgcA6137AY.40.000009
ORF3a143A143AgcCgcG2137AY.40.000003
ORF3a143A143AgcCgcT111113B.10.001017
ORF3a143A143AgcCgcG1113B.10.000009
ORF3a143A143AgcCgcA1113B.10.000009
ORF3a143A143AgcCgcT100100AY.250.000601
ORF3a143A143AgcCgcT3846B.1.617.20.000143
ORF3a143A143AgcCgcA846B.1.617.20.00003
ORF3a143A143AgcCgcT2728P.10.000425
ORF3a143A143AgcCgcA128P.10.000016
ORF3a143A143AgcCgcT1919B.1.3240.030498
ORF3a143A143AgcCgcA1718AY.50.000351
ORF3a143A143AgcCgcT118AY.50.000021
ORF3a143A143AgcCgcT1111A.2.5.20.017296
ORF3a143A143AgcCgcA1011AY.30.000099
ORF3a143A143AgcCgcT111AY.30.00001
ORF3a143A143AgcCgcT1111B.1.36.380.018062
ORF3a143A143AgcCgcT1010AY.260.000283
ORF3a143A143AgcCgcT1010B.1.20.000088
ORF3a143A143AgcCgcT89AY.430.000035
ORF3a143A143AgcCgcA19AY.430.000004
ORF3a143A143AgcCgcA48B.1.10.000073
ORF3a143A143AgcCgcT48B.1.10.000073
ORF3a143A143AgcCgcG88B.1.1.500.005431
ORF3a143A143AgcCgcT67B.1.3510.000178
ORF3a143A143AgcCgcA17B.1.3510.00003
ORF3a143A143AgcCgcT77P.1.150.001626
ORF3a143A143AgcCgcT66AY.1000.000276
ORF3a143A143AgcCgcT45AY.1030.000025
ORF3a143A143AgcCgcA15AY.1030.000006
ORF3a143A143AgcCgcT24AY.1170.000169
ORF3a143A143AgcCgcA24AY.1170.000169
ORF3a143A143AgcCgcA24AY.1190.000071
ORF3a143A143AgcCgcT24AY.1190.000071
ORF3a143A143AgcCgcT34AY.390.000074
ORF3a143A143AgcCgcA14AY.390.000025
ORF3a143A143AgcCgcT44B.1.466.20.001565
ORF3a143A143AgcCgcT24B.1.5260.000047
ORF3a143A143AgcCgcA24B.1.5260.000047
ORF3a143A143AgcCgcT44B.1.6230.002146
ORF3a143A143AgcCgcT33AY.290.000047
ORF3a143A143AgcCgcA23AY.98.10.000097
ORF3a143A143AgcCgcT13AY.98.10.000048
ORF3a143A143AgcCgcA13B0.000128
ORF3a143A143AgcCgcG13B0.000128
ORF3a143A143AgcCgcT13B0.000128
ORF3a143A143AgcCgcT33B.1.177.120.000455
ORF3a143A143AgcCgcT23B.1.4270.000101
ORF3a143A143AgcCgcG13B.1.4270.00005
ORF3a143A143AgcCgcT33B.1.6210.000266
ORF3a143A143AgcCgcT33B.1.6370.000219
ORF3a143A143AgcCgcT22AY.120.2.10.000997
ORF3a143A143AgcCgcT22AY.130.000322
ORF3a143A143AgcCgcT22AY.200.000078
ORF3a143A143AgcCgcT22AY.470.000062
ORF3a143A143AgcCgcA22AY.90.000135
ORF3a143A143AgcCgcT22AY.920.000575
ORF3a143A143AgcCgcT22B.1.1.280.000622
ORF3a143A143AgcCgcT22B.1.1.4200.002012
ORF3a143A143AgcCgcT22B.1.1.5190.000079
ORF3a143A143AgcCgcT22B.1.1770.000026
ORF3a143A143AgcCgcT22B.1.177.440.001038
ORF3a143A143AgcCgcT22B.1.177.540.001213
ORF3a143A143AgcCgcT22P.1.140.000096
ORF3a143A143AgcCgcT11A0.000387
ORF3a143A143AgcCgcT11AW.10.003049
ORF3a143A143AgcCgcT11AY.1020.000027
ORF3a143A143AgcCgcG11AY.370.000316
ORF3a143A143AgcCgcT11AY.39.10.00004
ORF3a143A143AgcCgcA11AY.4.20.000022
ORF3a143A143AgcCgcA11AY.46.20.000635
ORF3a143A143AgcCgcT11AY.60.000041
ORF3a143A143AgcCgcT11AY.610.000105
ORF3a143A143AgcCgcA11AY.7.10.000113
ORF3a143A143AgcCgcA11AY.750.000056
ORF3a143A143AgcCgcT11AY.75.10.00018
ORF3a143A143AgcCgcT11AY.980.000079
ORF3a143A143AgcCgcT11AY.99.20.000092
ORF3a143A143AgcCgcT11B.1.1.1570.000913
ORF3a143A143AgcCgcT11B.1.1.2140.000055
ORF3a143A143AgcCgcT11B.1.1.3480.000796
ORF3a143A143AgcCgcT11B.1.1.4190.007407
ORF3a143A143AgcCgcT11B.1.1400.018868
ORF3a143A143AgcCgcT11B.1.177.110.001698
ORF3a143A143AgcCgcT11B.1.177.750.001041
ORF3a143A143AgcCgcG11B.1.2230.002778
ORF3a143A143AgcCgcT11B.1.2410.000812
ORF3a143A143AgcCgcT11B.1.2430.00007
ORF3a143A143AgcCgcT11B.1.2800.007143
ORF3a143A143AgcCgcT11B.1.36.290.000517
ORF3a143A143AgcCgcT11B.1.4000.000429
ORF3a143A143AgcCgcT11B.1.4290.000024
ORF3a143A143AgcCgcG11B.1.4500.011364
ORF3a143A143AgcCgcT11B.1.5560.007519
ORF3a143A143AgcCgcT11B.1.5960.000087
ORF3a143A143AgcCgcT11B.1.6090.000479
ORF3a143A143AgcCgcT11B.1.80.001972
ORF3a143A143AgcCgcA11B.60.00091
ORF3a143A143AgcCgcT11C.36.30.000567
ORF3a143A143AgcCgcT11D.20.000075
ORF3a143A143AgcCgcT11P.1.100.000269
ORF3a143A143AgcCgcT11Q.10.000126
ORF3a143A143AgcCgcT11Q.30.000145