CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = A110S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a110A110SnonsynGctTct20808207990.99956725720-25722
ORF3a110A110SnonsynGcTTcG2080840.00019223425720-25722
ORF3a110A110SnonsynGcTTcC2080830.00014417525720-25722
ORF3a110A110SnonsynGCtAGt2080820.000096116925720-25722

Details of the mutation A110S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a110A110SGctTct2079920808All0.003978
ORF3a110A110SGcTTcG420808All0.000001
ORF3a110A110SGcTTcC320808All0.000001
ORF3a110A110SGCtAGt220808All0
ORF3a110A110SGctTct51575157AY.690.962666
ORF3a110A110SGctTct16091609B.1.1.70.00144
ORF3a110A110SGctTct14231423AY.1020.037729
ORF3a110A110SGctTct13951395B.1.1770.018369
ORF3a110A110SGctTct11641164AY.40.001812
ORF3a110A110SGctTct992992AY.1030.006159
ORF3a110A110SGctTct879879AY.46.40.144596
ORF3a110A110SGctTct872872B.1.2320.468565
ORF3a110A110SGctTct779779B.1.617.20.002933
ORF3a110A110SGctTct702702C.370.081476
ORF3a110A110SGctTct622622AY.250.003741
ORF3a110A110SGctTct525525AY.420.021121
ORF3a110A110SGctTct435435AY.30.004327
ORF3a110A110SGctTct396396B.1.177.760.987531
ORF3a110A110SGctTct196196S.10.970297
ORF3a110A110SGctTct192192AY.440.001169
ORF3a110A110SGctTct184184B.1.20.00162
ORF3a110A110SGctTct144144AY.430.000638
ORF3a110A110SGctTct138138B.10.001264
ORF3a110A110SGctTct110110P.1.140.005258
ORF3a110A110SGctTct102102B.1.2210.007245
ORF3a110A110SGctTct9696B.1.3510.002854
ORF3a110A110SGctTct8989AY.460.009263
ORF3a110A110SGctTct8686B.1.1600.002682
ORF3a110A110SGctTct7878AY.360.011561
ORF3a110A110SGctTct7777B.1.4040.10026
ORF3a110A110SGctTct7676AY.610.007963
ORF3a110A110SGctTct7474AY.340.007175
ORF3a110A110SGctTct7171AY.390.001755
ORF3a110A110SGctTct6971B.1.10.001252
ORF3a110A110SGcTTcG171B.1.10.000018
ORF3a110A110SGcTTcC171B.1.10.000018
ORF3a110A110SGctTct7070B.1.5260.001645
ORF3a110A110SGctTct6969P.10.001087
ORF3a110A110SGctTct6060AY.4.20.001301
ORF3a110A110SGctTct6060B.1.2390.07326
ORF3a110A110SGctTct5757B.1.2360.117043
ORF3a110A110SGctTct5757Q.30.008267
ORF3a110A110SGctTct5454AY.4.40.022095
ORF3a110A110SGctTct5050AY.700.010425
ORF3a110A110SGctTct4444AY.50.000909
ORF3a110A110SGctTct4444AY.7.10.004959
ORF3a110A110SGctTct4040AY.1000.00184
ORF3a110A110SGctTct4040B.1.6230.021459
ORF3a110A110SGctTct3838B.1.1.3530.791667
ORF3a110A110SGctTct3838B.1.177.750.039542
ORF3a110A110SGctTct3737B.1.1.500.025119
ORF3a110A110SGctTct3232B.1.4290.000753
ORF3a110A110SGctTct3030AY.1200.001115
ORF3a110A110SGctTct2828B.1.3690.007986
ORF3a110A110SGctTct2828B.1.5950.007307
ORF3a110A110SGctTct2727AY.39.10.00107
ORF3a110A110SGctTct2626AF.10.962963
ORF3a110A110SGctTct2525AY.1070.01165
ORF3a110A110SGctTct2525B.1.4070.892857
ORF3a110A110SGctTct2424B.1.6210.002124
ORF3a110A110SGctTct2323B.1.1.5190.000913
ORF3a110A110SGctTct2222B.1.4270.001111
ORF3a110A110SGctTct2121AY.240.009052
ORF3a110A110SGctTct2020B.1.1.10.006534
ORF3a110A110SGctTct1919AY.75.10.003426
ORF3a110A110SGctTct1818AY.60.00074
ORF3a110A110SGctTct1818AY.90.001217
ORF3a110A110SGctTct1818B.1.258.170.001871
ORF3a110A110SGctTct1717AY.116.10.005294
ORF3a110A110SGctTct1717AY.34.10.008669
ORF3a110A110SGctTct1717B.1.1.460.074236
ORF3a110A110SGctTct1616AY.300.006332
ORF3a110A110SGctTct1515AY.200.000583
ORF3a110A110SGctTct1515AY.230.001046
ORF3a110A110SGctTct1515B.1.1.3970.033784
ORF3a110A110SGctTct1515B.1.466.20.005869
ORF3a110A110SGctTct1515B.1.5600.069444
ORF3a110A110SGctTct1414AY.840.006124
ORF3a110A110SGctTct1313AY.1170.001099
ORF3a110A110SGctTct1313AY.290.000205
ORF3a110A110SGctTct5120.277778
ORF3a110A110SGcTTcG3120.166667
ORF3a110A110SGCtAGt2120.111111
ORF3a110A110SGcTTcC2120.111111
ORF3a110A110SGctTct1212AY.1160.003441
ORF3a110A110SGctTct1212AY.470.000373
ORF3a110A110SGctTct1212AY.710.005701
ORF3a110A110SGctTct1212P.1.160.004489
ORF3a110A110SGctTct1111AY.1190.000388
ORF3a110A110SGctTct1111AY.120.10.003531
ORF3a110A110SGctTct1111AY.260.000311
ORF3a110A110SGctTct1111AY.330.000735
ORF3a110A110SGctTct1111AY.870.009159
ORF3a110A110SGctTct1111B.1.1.2170.04
ORF3a110A110SGctTct1111B.1.1.330.00463
ORF3a110A110SGctTct1111B.1.160.300.032738
ORF3a110A110SGctTct1111B.1.2340.001451
ORF3a110A110SGctTct1010AY.1060.003349
ORF3a110A110SGctTct1010AY.1180.000626
ORF3a110A110SGctTct1010AY.320.005325
ORF3a110A110SGctTct1010AY.5.30.003374
ORF3a110A110SGctTct1010B.1.1.2840.001074
ORF3a110A110SGctTct99AY.4.50.000967
ORF3a110A110SGctTct99AY.450.001095
ORF3a110A110SGctTct99AY.98.10.000436
ORF3a110A110SGctTct99B.1.5960.000784
ORF3a110A110SGctTct99P.20.00168
ORF3a110A110SGctTct88AY.46.20.005083
ORF3a110A110SGctTct88AY.880.007073
ORF3a110A110SGctTct88AY.970.013605
ORF3a110A110SGctTct88AY.980.000632
ORF3a110A110SGctTct88B.1.177.540.004851
ORF3a110A110SGctTct77AY.1040.013889
ORF3a110A110SGctTct77AY.1210.000947
ORF3a110A110SGctTct77AY.190.007982
ORF3a110A110SGctTct77B.1.1.280.002179
ORF3a110A110SGctTct77B.1.3960.00494
ORF3a110A110SGctTct77B.1.617.10.000903
ORF3a110A110SGctTct77C.37.10.018325
ORF3a110A110SGctTct66AY.9.20.00022
ORF3a110A110SGctTct66AY.99.20.000553
ORF3a110A110SGctTct66B.1.177.600.001311
ORF3a110A110SGctTct66B.1.360.000875
ORF3a110A110SGctTct66N.50.010601
ORF3a110A110SGctTct66P.1.70.001916
ORF3a110A110SGctTct55AY.1110.000916
ORF3a110A110SGctTct55AY.680.001369
ORF3a110A110SGctTct55AY.770.005637
ORF3a110A110SGctTct55AY.920.001436
ORF3a110A110SGctTct55B.1.177.440.002595
ORF3a110A110SGctTct55B.1.5250.000566
ORF3a110A110SGctTct55B.1.619.10.003207
ORF3a110A110SGctTct55B.1.6370.000365
ORF3a110A110SGctTct55B.400.001821
ORF3a110A110SGctTct55C.160.005302
ORF3a110A110SGctTct44AY.350.000932
ORF3a110A110SGctTct44AY.370.001264
ORF3a110A110SGctTct44AY.46.60.000289
ORF3a110A110SGctTct44AY.5.40.001107
ORF3a110A110SGctTct44AY.530.00115
ORF3a110A110SGctTct44AY.540.000381
ORF3a110A110SGctTct44B.1.1.1890.006051
ORF3a110A110SGctTct44B.1.1.5260.014184
ORF3a110A110SGctTct44B.1.177.70.000659
ORF3a110A110SGctTct44B.1.258.30.0067
ORF3a110A110SGctTct44B.1.3560.006908
ORF3a110A110SGctTct44B.1.36.290.002069
ORF3a110A110SGctTct44B.1.4000.001716
ORF3a110A110SGctTct44B.1.4220.003249
ORF3a110A110SGctTct44B.1.5580.018265
ORF3a110A110SGctTct44B.1.6090.001918
ORF3a110A110SGctTct44C.350.003096
ORF3a110A110SGctTct44P.1.20.004624
ORF3a110A110SGctTct44Q.80.00066
ORF3a110A110SGctTct33AY.1080.003308
ORF3a110A110SGctTct33AY.1090.002219
ORF3a110A110SGctTct33AY.1100.000338
ORF3a110A110SGctTct33AY.1130.000427
ORF3a110A110SGctTct33AY.3.10.000256
ORF3a110A110SGctTct33AY.380.001498
ORF3a110A110SGctTct33AY.730.001996
ORF3a110A110SGctTct33AY.750.000168
ORF3a110A110SGctTct33AY.790.003632
ORF3a110A110SGctTct33AY.890.014706
ORF3a110A110SGctTct33B0.000383
ORF3a110A110SGctTct33B.1.1.2140.000166
ORF3a110A110SGctTct33B.1.1.2190.015
ORF3a110A110SGctTct33B.1.1.2220.000612
ORF3a110A110SGctTct33B.1.1.3770.004144
ORF3a110A110SGctTct33B.1.1.3880.136364
ORF3a110A110SGctTct33B.1.2430.000209
ORF3a110A110SGctTct33B.1.5240.004219
ORF3a110A110SGctTct22AY.1010.000981
ORF3a110A110SGctTct22AY.130.000322
ORF3a110A110SGctTct22AY.140.000176
ORF3a110A110SGctTct22AY.160.000759
ORF3a110A110SGctTct22AY.16.10.00094
ORF3a110A110SGctTct22AY.280.003781
ORF3a110A110SGctTct22AY.4.2.10.000298
ORF3a110A110SGctTct22AY.480.00093
ORF3a110A110SGctTct22AY.520.001629
ORF3a110A110SGctTct22AY.550.001835
ORF3a110A110SGctTct22AY.590.001059
ORF3a110A110SGctTct22AY.70.000392
ORF3a110A110SGctTct22B.1.1.1960.011429
ORF3a110A110SGctTct22B.1.1.2310.006192
ORF3a110A110SGctTct22B.1.1.2770.001517
ORF3a110A110SGctTct22B.1.1.3060.000877
ORF3a110A110SGctTct22B.1.1.3170.000823
ORF3a110A110SGctTct22B.1.1.3260.003521
ORF3a110A110SGctTct22B.1.1.3480.001592
ORF3a110A110SGctTct22B.1.1.390.001019
ORF3a110A110SGctTct22B.1.1.4480.004065
ORF3a110A110SGctTct22B.1.1.5210.010695
ORF3a110A110SGctTct22B.1.1.540.006042
ORF3a110A110SGctTct22B.1.1080.011628
ORF3a110A110SGctTct22B.1.1570.00597
ORF3a110A110SGctTct22B.1.177.650.001331
ORF3a110A110SGctTct22B.1.177.830.002963
ORF3a110A110SGctTct22B.1.177.90.002663
ORF3a110A110SGctTct22B.1.2140.007326
ORF3a110A110SGctTct22B.1.2410.001623
ORF3a110A110SGctTct22B.1.36.160.002849
ORF3a110A110SGctTct22B.1.36.190.018519
ORF3a110A110SGctTct22B.1.36.380.003284
ORF3a110A110SGctTct22B.1.3620.003082
ORF3a110A110SGctTct22B.1.438.10.000215
ORF3a110A110SGctTct22B.1.4700.002809
ORF3a110A110SGctTct22B.1.5760.001813
ORF3a110A110SGctTct22C.360.001821
ORF3a110A110SGctTct22P.30.00319
ORF3a110A110SGctTct22P.70.008734
ORF3a110A110SGctTct11A0.000387
ORF3a110A110SGctTct11A.10.000282
ORF3a110A110SGctTct11A.2.50.000499
ORF3a110A110SGctTct11A.2.5.20.001572
ORF3a110A110SGctTct11A.23.10.000704
ORF3a110A110SGctTct11AA.10.007246
ORF3a110A110SGctTct11AY.1050.000643
ORF3a110A110SGctTct11AY.110.001339
ORF3a110A110SGctTct11AY.1140.000231
ORF3a110A110SGctTct11AY.120.000316
ORF3a110A110SGctTct11AY.120.2.10.000498
ORF3a110A110SGctTct11AY.29.10.000221
ORF3a110A110SGctTct11AY.310.018519
ORF3a110A110SGctTct11AY.4.30.000842
ORF3a110A110SGctTct11AY.400.000964
ORF3a110A110SGctTct11AY.410.000294
ORF3a110A110SGctTct11AY.46.10.001027
ORF3a110A110SGctTct11AY.640.000595
ORF3a110A110SGctTct11AY.650.000533
ORF3a110A110SGctTct11AY.670.000464
ORF3a110A110SGctTct11AY.720.001361
ORF3a110A110SGctTct11AY.740.000116
ORF3a110A110SGctTct11AY.760.004831
ORF3a110A110SGctTct11AY.780.001541
ORF3a110A110SGctTct11AY.850.000427
ORF3a110A110SGctTct11AY.9.10.000084
ORF3a110A110SGctTct11AY.9.2.10.001976
ORF3a110A110SGctTct11AY.940.000443
ORF3a110A110SGctTct11AY.960.002075
ORF3a110A110SGctTct11AY.990.001049
ORF3a110A110SGctTct11B.1.1.100.001115
ORF3a110A110SGctTct11B.1.1.1570.000913
ORF3a110A110SGctTct11B.1.1.2160.00089
ORF3a110A110SGctTct11B.1.1.2390.032258
ORF3a110A110SGctTct11B.1.1.2630.001558
ORF3a110A110SGctTct11B.1.1.3010.001179
ORF3a110A110SGctTct11B.1.1.3280.016949
ORF3a110A110SGctTct11B.1.1.3930.111111
ORF3a110A110SGctTct11B.1.1.4090.002833
ORF3a110A110SGctTct11B.1.1.4190.007407
ORF3a110A110SGctTct11B.1.1.4320.001266
ORF3a110A110SGctTct11B.1.1.4640.001473
ORF3a110A110SGctTct11B.1.1.510.001718
ORF3a110A110SGctTct11B.1.1.570.011494
ORF3a110A110SGctTct11B.1.1.630.000386
ORF3a110A110SGctTct11B.1.1.80.003584
ORF3a110A110SGctTct11B.1.1390.000733
ORF3a110A110SGctTct11B.1.1400.018868
ORF3a110A110SGctTct11B.1.177.170.000821
ORF3a110A110SGctTct11B.1.177.350.000691
ORF3a110A110SGctTct11B.1.177.60.000977
ORF3a110A110SGctTct11B.1.177.630.002703
ORF3a110A110SGctTct11B.1.177.860.000183
ORF3a110A110SGctTct11B.1.177.870.000728
ORF3a110A110SGctTct11B.1.2100.002132
ORF3a110A110SGctTct11B.1.2230.002778
ORF3a110A110SGctTct11B.1.258.140.00098
ORF3a110A110SGctTct11B.1.2980.002114
ORF3a110A110SGctTct11B.1.3360.002439
ORF3a110A110SGctTct11B.1.351.20.000303
ORF3a110A110SGctTct11B.1.351.30.000876
ORF3a110A110SGctTct11B.1.36.10.00114
ORF3a110A110SGctTct11B.1.36.180.00042
ORF3a110A110SGctTct11B.1.36.220.001208
ORF3a110A110SGctTct11B.1.36.280.005747
ORF3a110A110SGctTct11B.1.36.390.002217
ORF3a110A110SGctTct11B.1.36.80.001
ORF3a110A110SGctTct11B.1.3610.001289
ORF3a110A110SGctTct11B.1.3880.090909
ORF3a110A110SGctTct11B.1.3910.001127
ORF3a110A110SGctTct11B.1.4060.006061
ORF3a110A110SGctTct11B.1.4260.001009
ORF3a110A110SGctTct11B.1.4560.003268
ORF3a110A110SGctTct11B.1.4660.023256
ORF3a110A110SGctTct11B.1.5750.000303
ORF3a110A110SGctTct11B.1.575.10.002439
ORF3a110A110SGctTct11B.1.5820.000491
ORF3a110A110SGctTct11B.1.5990.00365
ORF3a110A110SGctTct11B.1.6190.000871
ORF3a110A110SGctTct11B.1.6320.006711
ORF3a110A110SGctTct11B.200.023256
ORF3a110A110SGctTct11C.36.3.10.002717
ORF3a110A110SGctTct11C.390.018868
ORF3a110A110SGctTct11P.1.10.000318
ORF3a110A110SGctTct11P.1.100.000269
ORF3a110A110SGctTct11P.1.120.000484
ORF3a110A110SGctTct11P.1.150.000232
ORF3a110A110SGctTct11Q.10.000126
ORF3a110A110SGctTct11Q.40.000455
ORF3a110A110SGctTct11R.10.00009
ORF3a110A110SGctTct11Z.10.00289