CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 93 & Codon = caT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a93H93HsyncaCcaT19441944125669-25671

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a93H93HcaCcaT19441944All0.000372
ORF3a93H93HcaCcaT529529AY.40.000823
ORF3a93H93HcaCcaT256256B.1.1.70.000229
ORF3a93H93HcaCcaT239239AY.23.10.09975
ORF3a93H93HcaCcaT153153AY.1100.017241
ORF3a93H93HcaCcaT9797B.1.4290.002282
ORF3a93H93HcaCcaT7070B.1.3490.050036
ORF3a93H93HcaCcaT4545B.1.617.20.000169
ORF3a93H93HcaCcaT3939AY.290.000615
ORF3a93H93HcaCcaT3939B.1.1.5240.8125
ORF3a93H93HcaCcaT2424AY.430.000106
ORF3a93H93HcaCcaT2222AY.1030.000137
ORF3a93H93HcaCcaT2222B.10.000202
ORF3a93H93HcaCcaT2121B.1.5260.000494
ORF3a93H93HcaCcaT2020AY.440.000122
ORF3a93H93HcaCcaT1717B.1.20.00015
ORF3a93H93HcaCcaT1616AY.250.000096
ORF3a93H93HcaCcaT1414AY.30.000139
ORF3a93H93HcaCcaT1414AY.390.000346
ORF3a93H93HcaCcaT1414AY.7.10.001578
ORF3a93H93HcaCcaT1313AY.29.10.002867
ORF3a93H93HcaCcaT1313B.1.4270.000656
ORF3a93H93HcaCcaT1212AY.420.000483
ORF3a93H93HcaCcaT1212B.1.1770.000158
ORF3a93H93HcaCcaT1010B.1.2430.000696
ORF3a93H93HcaCcaT1010P.10.000158
ORF3a93H93HcaCcaT99AY.1000.000414
ORF3a93H93HcaCcaT99AY.1020.000239
ORF3a93H93HcaCcaT99B.1.177.810.001704
ORF3a93H93HcaCcaT88AY.50.000165
ORF3a93H93HcaCcaT77AY.200.000272
ORF3a93H93HcaCcaT77B.1.258.170.000728
ORF3a93H93HcaCcaT66AY.4.20.00013
ORF3a93H93HcaCcaT66AY.99.20.000553
ORF3a93H93HcaCcaT66B.1.1.5190.000238
ORF3a93H93HcaCcaT66P.1.100.001617
ORF3a93H93HcaCcaT66P.1.140.000287
ORF3a93H93HcaCcaT55AY.130.000805
ORF3a93H93HcaCcaT55AY.330.000334
ORF3a93H93HcaCcaT55B.1.3510.000149
ORF3a93H93HcaCcaT55B.1.6210.000443
ORF3a93H93HcaCcaT44AY.1130.00057
ORF3a93H93HcaCcaT44AY.1190.000141
ORF3a93H93HcaCcaT44AY.1200.000149
ORF3a93H93HcaCcaT44AY.230.000279
ORF3a93H93HcaCcaT44B.1.10.000073
ORF3a93H93HcaCcaT44B.1.1.1530.004381
ORF3a93H93HcaCcaT44B.1.177.600.000874
ORF3a93H93HcaCcaT44C.160.004242
ORF3a93H93HcaCcaT33AY.460.000312
ORF3a93H93HcaCcaT33AY.540.000286
ORF3a93H93HcaCcaT33AY.90.000203
ORF3a93H93HcaCcaT33B.1.1.2220.000612
ORF3a93H93HcaCcaT33B.1.177.70.000495
ORF3a93H93HcaCcaT22AY.270.000129
ORF3a93H93HcaCcaT22AY.3.10.000171
ORF3a93H93HcaCcaT22AY.360.000296
ORF3a93H93HcaCcaT22AY.4.40.000818
ORF3a93H93HcaCcaT22AY.4.50.000215
ORF3a93H93HcaCcaT22AY.410.000588
ORF3a93H93HcaCcaT22AY.5.30.000675
ORF3a93H93HcaCcaT22AY.60.000082
ORF3a93H93HcaCcaT22AY.750.000112
ORF3a93H93HcaCcaT22AY.9.20.000073
ORF3a93H93HcaCcaT22B.1.2340.000264
ORF3a93H93HcaCcaT22B.1.2410.001623
ORF3a93H93HcaCcaT22P.1.70.000639
ORF3a93H93HcaCcaT22P.30.00319
ORF3a93H93HcaCcaT11AY.1060.000335
ORF3a93H93HcaCcaT11AY.116.10.000311
ORF3a93H93HcaCcaT11AY.1170.000085
ORF3a93H93HcaCcaT11AY.1210.000135
ORF3a93H93HcaCcaT11AY.260.000028
ORF3a93H93HcaCcaT11AY.320.000532
ORF3a93H93HcaCcaT11AY.39.10.00004
ORF3a93H93HcaCcaT11AY.46.60.000072
ORF3a93H93HcaCcaT11AY.470.000031
ORF3a93H93HcaCcaT11AY.650.000533
ORF3a93H93HcaCcaT11AY.70.000196
ORF3a93H93HcaCcaT11AY.710.000475
ORF3a93H93HcaCcaT11AY.930.000273
ORF3a93H93HcaCcaT11AY.980.000079
ORF3a93H93HcaCcaT11B.1.1.1370.0125
ORF3a93H93HcaCcaT11B.1.1.1860.003436
ORF3a93H93HcaCcaT11B.1.1.2070.001182
ORF3a93H93HcaCcaT11B.1.1.2200.001859
ORF3a93H93HcaCcaT11B.1.1.3060.000438
ORF3a93H93HcaCcaT11B.1.1.3170.000412
ORF3a93H93HcaCcaT11B.1.1.3180.000302
ORF3a93H93HcaCcaT11B.1.1.4340.000349
ORF3a93H93HcaCcaT11B.1.1.4850.016667
ORF3a93H93HcaCcaT11B.1.1.5280.004808
ORF3a93H93HcaCcaT11B.1.1600.000031
ORF3a93H93HcaCcaT11B.1.1690.014925
ORF3a93H93HcaCcaT11B.1.177.330.001645
ORF3a93H93HcaCcaT11B.1.177.60.000977
ORF3a93H93HcaCcaT11B.1.2210.000071
ORF3a93H93HcaCcaT11B.1.2580.000067
ORF3a93H93HcaCcaT11B.1.3110.000275
ORF3a93H93HcaCcaT11B.1.351.20.000303
ORF3a93H93HcaCcaT11B.1.351.30.000876
ORF3a93H93HcaCcaT11B.1.360.000146
ORF3a93H93HcaCcaT11B.1.3750.00082
ORF3a93H93HcaCcaT11B.1.438.10.000107
ORF3a93H93HcaCcaT11B.1.5250.000113
ORF3a93H93HcaCcaT11B.1.5750.000303
ORF3a93H93HcaCcaT11B.1.575.10.002439
ORF3a93H93HcaCcaT11B.1.5760.000907
ORF3a93H93HcaCcaT11B.1.5820.000491
ORF3a93H93HcaCcaT11B.1.5870.001898
ORF3a93H93HcaCcaT11B.1.6000.005848
ORF3a93H93HcaCcaT11B.1.6370.000073
ORF3a93H93HcaCcaT11B.110.005128
ORF3a93H93HcaCcaT11D.20.000075
ORF3a93H93HcaCcaT11P.1.120.000484
ORF3a93H93HcaCcaT11P.1.150.000232
ORF3a93H93HcaCcaT11Q.80.000165