CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 8

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a8F8FsynttCttT56005600125414-25416
ORF3a8F8LnonsynttCttA3522150.61079525414-25416
ORF3a8F8LnonsynTtcCtc3521340.38068225414-25416
ORF3a8F8LnonsynttCttG35220.0056818225414-25416
ORF3a8F8LnonsynTtCCtT35210.0028409125414-25416
ORF3a8F8deldelTTC---145145125414-25416
ORF3a8F8del1delttCtt-27240.88888925414-25416
ORF3a8F8del1delTtc-tc2730.11111125414-25416
ORF3a8F8SnonsyntTctCc2323125414-25416
ORF3a8F8InonsynTtcAtc860.7525414-25416
ORF3a8F8InonsynTtCAtA820.2525414-25416
ORF3a8F8CnonsyntTctGc66125414-25416
ORF3a8F8YnonsyntTctAc66125414-25416
ORF3a8F8VnonsynTtcGtc55125414-25416
ORF3a8F8del2deltTCt--320.66666725414-25416
ORF3a8F8del2delTTc--c310.33333325414-25416
ORF3a8F8MnonsynTtCAtG22125414-25416
ORF3a8F8PnonsynTTCCCG11125414-25416

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a8F8FttCttT56005600All0.001071
ORF3a8F8FttCttT12671267AY.40.001972
ORF3a8F8FttCttT974974B.1.1.70.000872
ORF3a8F8LttCttA215352All0.000041
ORF3a8F8LTtcCtc134352All0.000026
ORF3a8F8LttCttG2352All0
ORF3a8F8LTtCCtT1352All0
ORF3a8F8FttCttT332332B.1.1.4170.897297
ORF3a8F8FttCttT291291B.1.617.20.001096
ORF3a8F8FttCttT264264P.1.160.098765
ORF3a8F8FttCttT213213AY.1030.001323
ORF3a8F8delTTC---145145All0.000028
ORF3a8F8FttCttT136136B.1.20.001198
ORF3a8F8FttCttT128128P.10.002017
ORF3a8F8FttCttT104104AY.30.001034
ORF3a8F8FttCttT104104AY.440.000633
ORF3a8F8FttCttT100100B.1.5260.00235
ORF3a8F8FttCttT8181AY.430.000359
ORF3a8F8FttCttT8080AY.4.20.001735
ORF3a8F8FttCttT8080R.10.007201
ORF3a8F8FttCttT7676B.1.1770.001001
ORF3a8F8FttCttT7575B.1.1.5190.002978
ORF3a8F8LttCttA3467AY.40.000053
ORF3a8F8LTtcCtc3367AY.40.000051
ORF3a8F8FttCttT6262AY.250.000373
ORF3a8F8FttCttT5959AY.1000.002714
ORF3a8F8FttCttT5858B.10.000531
ORF3a8F8FttCttT5656B.1.10.001016
ORF3a8F8LttCttA3843B.1.617.20.000143
ORF3a8F8LTtcCtc543B.1.617.20.000019
ORF3a8F8FttCttT3636AY.1200.001338
ORF3a8F8FttCttT3535AY.330.002337
ORF3a8F8delTTC---3333B.1.1.70.00003
ORF3a8F8FttCttT3333B.1.2340.004354
ORF3a8F8LttCttA3132AY.430.000137
ORF3a8F8LttCttG132AY.430.000004
ORF3a8F8FttCttT3131B.1.5250.003508
ORF3a8F8LttCttA2030B.1.1.70.000018
ORF3a8F8LTtcCtc1030B.1.1.70.000009
ORF3a8F8LTtcCtc2929B.10.000266
ORF3a8F8FttCttT2828AY.420.001126
ORF3a8F8del1ttCtt-2427All0.000005
ORF3a8F8del1Ttc-tc327All0.000001
ORF3a8F8FttCttT2727AY.470.00084
ORF3a8F8FttCttT2626B.1.2430.001809
ORF3a8F8FttCttT2525AY.910.018262
ORF3a8F8FttCttT2424AY.390.000593
ORF3a8F8StTctCc2323All0.000004
ORF3a8F8FttCttT2323AY.39.10.000911
ORF3a8F8FttCttT2323B.1.4290.000541
ORF3a8F8FttCttT2222AY.130.003542
ORF3a8F8FttCttT2020AY.230.001395
ORF3a8F8FttCttT2020AY.940.008853
ORF3a8F8delTTC---1919AY.40.00003
ORF3a8F8FttCttT1919B.1.177.750.019771
ORF3a8F8FttCttT1919B.1.3510.000565
ORF3a8F8FttCttT1818AY.1020.000477
ORF3a8F8LttCttA1818AY.200.0007
ORF3a8F8LTtcCtc1818B.1.1.3070.04557
ORF3a8F8FttCttT1717AY.200.000661
ORF3a8F8FttCttT1616AY.1170.001352
ORF3a8F8FttCttT1616AY.290.000252
ORF3a8F8FttCttT1616AY.360.002371
ORF3a8F8FttCttT1616AY.50.00033
ORF3a8F8FttCttT1515AY.260.000425
ORF3a8F8FttCttT1515B.1.1.3300.9375
ORF3a8F8FttCttT1414AY.400.0135
ORF3a8F8delTTC---1313B.1.1770.000171
ORF3a8F8FttCttT1313B.1.6210.001151
ORF3a8F8delTTC---1212AY.4.50.00129
ORF3a8F8FttCttT1212B.1.1.2980.010345
ORF3a8F8LTtcCtc811AY.440.000049
ORF3a8F8LttCttA311AY.440.000018
ORF3a8F8FttCttT1111AZ.30.016717
ORF3a8F8FttCttT1111B.1.5640.004685
ORF3a8F8FttCttT1010B.1.1.2140.000555
ORF3a8F8FttCttT1010B.1.4270.000505
ORF3a8F8FttCttT1010C.370.001161
ORF3a8F8FttCttT99AY.280.017013
ORF3a8F8FttCttT99AY.99.20.000829
ORF3a8F8FttCttT99B.1.2210.000639
ORF3a8F8ITtcAtc68All0.000001
ORF3a8F8ITtCAtA28All0
ORF3a8F8FttCttT88AY.1190.000282
ORF3a8F8del1ttCtt-88AY.40.000012
ORF3a8F8FttCttT88AY.4.50.00086
ORF3a8F8FttCttT88AY.460.000833
ORF3a8F8FttCttT88AY.610.000838
ORF3a8F8FttCttT88AY.750.000448
ORF3a8F8FttCttT88B0.001022
ORF3a8F8LttCttA67AY.1020.000159
ORF3a8F8LTtcCtc17AY.1020.000027
ORF3a8F8FttCttT77AY.410.002058
ORF3a8F8del1ttCtt-67B.1.1.70.000005
ORF3a8F8del1Ttc-tc17B.1.1.70.000001
ORF3a8F8FttCttT77B.1.4751
ORF3a8F8YtTctAc66All0.000001
ORF3a8F8CtTctGc66All0.000001
ORF3a8F8LttCttA66AY.250.000036
ORF3a8F8FttCttT66AY.9.20.00022
ORF3a8F8FttCttT66B.1.1.2880.011494
ORF3a8F8FttCttT66B.1.1600.000187
ORF3a8F8FttCttT66C.360.005464
ORF3a8F8LttCttA55AA.30.135135
ORF3a8F8VTtcGtc55All0.000001
ORF3a8F8FttCttT55AY.75.10.000902
ORF3a8F8FttCttT55AY.770.005637
ORF3a8F8FttCttT55AY.980.000395
ORF3a8F8FttCttT55AY.98.10.000242
ORF3a8F8FttCttT55B.1.1.4480.010163
ORF3a8F8LTtcCtc55B.1.177.70.000824
ORF3a8F8FttCttT55B.1.177.820.002387
ORF3a8F8FttCttT55B.1.3690.001426
ORF3a8F8FttCttT55C.230.02907
ORF3a8F8FttCttT55Q.20.003067
ORF3a8F8YtTctAc440.222222
ORF3a8F8ITtcAtc240.111111
ORF3a8F8ITtCAtA240.111111
ORF3a8F8LttCttA24AY.1000.000092
ORF3a8F8LTtcCtc24AY.1000.000092
ORF3a8F8FttCttT44AY.140.000352
ORF3a8F8delTTC---44AY.250.000024
ORF3a8F8CtTctGc44AY.30.00004
ORF3a8F8LttCttA44AY.450.000487
ORF3a8F8FttCttT44AY.540.000381
ORF3a8F8FttCttT44AY.60.000165
ORF3a8F8FttCttT44AY.740.000463
ORF3a8F8FttCttT44AY.840.00175
ORF3a8F8FttCttT44AY.90.00027
ORF3a8F8LTtcCtc24B.1.10.000036
ORF3a8F8LttCttA14B.1.10.000018
ORF3a8F8LTtCCtT14B.1.10.000018
ORF3a8F8FttCttT44B.1.1.3060.001754
ORF3a8F8FttCttT44B.1.1.3480.003185
ORF3a8F8FttCttT44B.1.177.210.000306
ORF3a8F8FttCttT44B.1.3110.001098
ORF3a8F8FttCttT44B.1.466.20.001565
ORF3a8F8FttCttT44L.30.014184
ORF3a8F8FttCttT44P.1.100.001078
ORF3a8F8FttCttT33A.2.50.001497
ORF3a8F8FttCttT33AD.20.000657
ORF3a8F8del2tTCt--23All0
ORF3a8F8del2TTc--c13All0
ORF3a8F8delTTC---33AY.1030.000019
ORF3a8F8LttCttA23AY.1030.000012
ORF3a8F8LTtcCtc13AY.1030.000006
ORF3a8F8FttCttT33AY.1050.001929
ORF3a8F8FttCttT33AY.1070.001398
ORF3a8F8FttCttT33AY.1080.003308
ORF3a8F8FttCttT33AY.116.10.000934
ORF3a8F8FttCttT33AY.1180.000188
ORF3a8F8LttCttA33AY.1190.000106
ORF3a8F8FttCttT33AY.1210.000406
ORF3a8F8delTTC---33AY.260.000085
ORF3a8F8LttCttA33AY.360.000445
ORF3a8F8StTctCc33AY.390.000074
ORF3a8F8LttCttA23AY.50.000041
ORF3a8F8LTtcCtc13AY.50.000021
ORF3a8F8FttCttT33AY.5.30.001012
ORF3a8F8FttCttT33AY.620.001307
ORF3a8F8FttCttT33AY.790.003632
ORF3a8F8LttCttA33AY.840.001312
ORF3a8F8FttCttT33B.1.1.1280.021277
ORF3a8F8FttCttT33B.1.1.2220.000612
ORF3a8F8FttCttT33B.1.1.2770.002276
ORF3a8F8FttCttT33B.1.1.2840.000322
ORF3a8F8FttCttT33B.1.1.4410.15
ORF3a8F8FttCttT33B.1.1.4860.004732
ORF3a8F8FttCttT33B.1.1.5230.004687
ORF3a8F8FttCttT33B.1.1.630.001157
ORF3a8F8LTtcCtc23B.1.4290.000047
ORF3a8F8LttCttA13B.1.4290.000024
ORF3a8F8FttCttT33B.1.4360.003086
ORF3a8F8FttCttT33B.1.5680.003333
ORF3a8F8StTctCc33B.1.5960.000261
ORF3a8F8FttCttT33B.1.5960.000261
ORF3a8F8delTTC---33B.1.6090.001438
ORF3a8F8delTTC---33B.1.617.20.000011
ORF3a8F8FttCttT33P.1.120.001452
ORF3a8F8FttCttT33P.1.140.000143
ORF3a8F8LTtcCtc33P.20.00056
ORF3a8F8MTtCAtG220.111111
ORF3a8F8LttCttA220.111111
ORF3a8F8LttCttA22A.10.000564
ORF3a8F8FttCttT22A.280.005291
ORF3a8F8MTtCAtG22All0
ORF3a8F8FttCttT22AY.1010.000981
ORF3a8F8FttCttT22AY.1130.000285
ORF3a8F8FttCttT22AY.20.000712
ORF3a8F8FttCttT22AY.240.000862
ORF3a8F8FttCttT22AY.270.000129
ORF3a8F8LttCttA12AY.270.000065
ORF3a8F8LTtcCtc12AY.270.000065
ORF3a8F8FttCttT22AY.29.10.000441
ORF3a8F8LTtcCtc12AY.30.00001
ORF3a8F8LttCttA12AY.30.00001
ORF3a8F8ITtcAtc22AY.40.000003
ORF3a8F8StTctCc22AY.40.000003
ORF3a8F8FttCttT22AY.4.2.10.000298
ORF3a8F8FttCttT22AY.46.40.000329
ORF3a8F8FttCttT22AY.46.60.000144
ORF3a8F8FttCttT22AY.80.001212
ORF3a8F8FttCttT22AY.9.10.000167
ORF3a8F8delTTC---22B.10.000018
ORF3a8F8StTctCc22B.1.10.000036
ORF3a8F8FttCttT22B.1.1.2160.001781
ORF3a8F8FttCttT22B.1.1.280.000622
ORF3a8F8FttCttT22B.1.1.3260.003521
ORF3a8F8FttCttT22B.1.1.330.000842
ORF3a8F8FttCttT22B.1.1.3340.032787
ORF3a8F8FttCttT22B.1.1.340.026316
ORF3a8F8FttCttT22B.1.1.4090.005666
ORF3a8F8FttCttT22B.1.1.4340.000697
ORF3a8F8FttCttT22B.1.1.500.001358
ORF3a8F8VTtcGtc22B.1.1.70.000002
ORF3a8F8StTctCc22B.1.1.70.000002
ORF3a8F8FttCttT22B.1.1.700.000682
ORF3a8F8LttCttA22B.1.1460.008475
ORF3a8F8FttCttT22B.1.1570.00597
ORF3a8F8FttCttT22B.1.177.350.001382
ORF3a8F8delTTC---22B.1.177.600.000437
ORF3a8F8FttCttT22B.1.177.70.00033
ORF3a8F8FttCttT22B.1.177.810.000379
ORF3a8F8delTTC---22B.1.177.830.002963
ORF3a8F8FttCttT22B.1.177.860.000367
ORF3a8F8LTtcCtc22B.1.20.000018
ORF3a8F8delTTC---22B.1.20.000018
ORF3a8F8FttCttT22B.1.2400.000431
ORF3a8F8FttCttT22B.1.360.000292
ORF3a8F8FttCttT22B.1.416.10.003125
ORF3a8F8LttCttA22B.1.5750.000607
ORF3a8F8del1ttCtt-22B.1.617.20.000008
ORF3a8F8delTTC---22B.1.6370.000146
ORF3a8F8FttCttT22B.1.810.042553
ORF3a8F8FttCttT22P.1.70.000639
ORF3a8F8FttCttT22P.20.000373
ORF3a8F8delTTC---22U.30.007722
ORF3a8F8StTctCc11A.20.000662
ORF3a8F8FttCttT11A.2.5.20.001572
ORF3a8F8FttCttT11A.210.00277
ORF3a8F8FttCttT11A.290.005319
ORF3a8F8FttCttT11AA.40.009091
ORF3a8F8FttCttT11AD.10.004115
ORF3a8F8FttCttT11AE.80.000489
ORF3a8F8PTTCCCG11All0
ORF3a8F8StTctCc11AY.1000.000046
ORF3a8F8del1ttCtt-11AY.1030.000006
ORF3a8F8FttCttT11AY.1040.001984
ORF3a8F8delTTC---11AY.1050.000643
ORF3a8F8LttCttA11AY.1080.001103
ORF3a8F8StTctCc11AY.1090.00074
ORF3a8F8FttCttT11AY.1090.00074
ORF3a8F8delTTC---11AY.1110.000183
ORF3a8F8FttCttT11AY.1110.000183
ORF3a8F8LttCttA11AY.1170.000085
ORF3a8F8del1Ttc-tc11AY.1200.000037
ORF3a8F8LttCttA11AY.1200.000037
ORF3a8F8delTTC---11AY.230.00007
ORF3a8F8del1ttCtt-11AY.250.000006
ORF3a8F8StTctCc11AY.250.000006
ORF3a8F8del2tTCt--11AY.250.000006
ORF3a8F8LttCttG11AY.260.000028
ORF3a8F8del1ttCtt-11AY.260.000028
ORF3a8F8LttCttA11AY.280.00189
ORF3a8F8delTTC---11AY.290.000016
ORF3a8F8PTTCCCG11AY.30.00001
ORF3a8F8VTtcGtc11AY.30.00001
ORF3a8F8delTTC---11AY.3.10.000085
ORF3a8F8FttCttT11AY.3.10.000085
ORF3a8F8FttCttT11AY.320.000532
ORF3a8F8FttCttT11AY.340.000097
ORF3a8F8FttCttT11AY.370.000316
ORF3a8F8LttCttA11AY.390.000025
ORF3a8F8delTTC---11AY.39.10.00004
ORF3a8F8CtTctGc11AY.40.000002
ORF3a8F8YtTctAc11AY.40.000002
ORF3a8F8StTctCc11AY.4.20.000022
ORF3a8F8LttCttA11AY.4.20.000022
ORF3a8F8del1Ttc-tc11AY.4.50.000107
ORF3a8F8ITtcAtc11AY.430.000004
ORF3a8F8delTTC---11AY.430.000004
ORF3a8F8del1ttCtt-11AY.440.000006
ORF3a8F8StTctCc11AY.440.000006
ORF3a8F8FttCttT11AY.450.000122
ORF3a8F8delTTC---11AY.46.20.000635
ORF3a8F8delTTC---11AY.46.40.000165
ORF3a8F8LttCttA11AY.46.50.000198
ORF3a8F8LttCttA11AY.46.60.000072
ORF3a8F8delTTC---11AY.50.000021
ORF3a8F8FttCttT11AY.520.000814
ORF3a8F8LttCttA11AY.520.000814
ORF3a8F8LttCttA11AY.530.000288
ORF3a8F8FttCttT11AY.550.000917
ORF3a8F8FttCttT11AY.590.00053
ORF3a8F8LTtcCtc11AY.60.000041
ORF3a8F8delTTC---11AY.60.000041
ORF3a8F8delTTC---11AY.600.000938
ORF3a8F8LttCttA11AY.610.000105
ORF3a8F8FttCttT11AY.640.000595
ORF3a8F8FttCttT11AY.650.000533
ORF3a8F8FttCttT11AY.670.000464
ORF3a8F8FttCttT11AY.680.000274
ORF3a8F8LTtcCtc11AY.690.000187
ORF3a8F8FttCttT11AY.70.000196
ORF3a8F8FttCttT11AY.7.10.000113
ORF3a8F8LttCttA11AY.7.10.000113
ORF3a8F8FttCttT11AY.710.000475
ORF3a8F8StTctCc11AY.750.000056
ORF3a8F8LttCttA11AY.750.000056
ORF3a8F8delTTC---11AY.810.001992
ORF3a8F8del2tTCt--11AY.820.001357
ORF3a8F8FttCttT11AY.880.000884
ORF3a8F8LttCttA11AY.9.20.000037
ORF3a8F8FttCttT11AY.900.000684
ORF3a8F8LTtcCtc11AY.91.10.004065
ORF3a8F8LttCttA11AY.920.000287
ORF3a8F8LttCttA11AY.930.000273
ORF3a8F8LttCttA11AY.940.000443
ORF3a8F8delTTC---11AY.990.001049
ORF3a8F8LTtcCtc11AY.99.20.000092
ORF3a8F8FttCttT11AZ.40.003356
ORF3a8F8CtTctGc11B.10.000009
ORF3a8F8del1ttCtt-11B.10.000009
ORF3a8F8VTtcGtc11B.10.000009
ORF3a8F8delTTC---11B.1.10.000018
ORF3a8F8FttCttT11B.1.1.1230.017857
ORF3a8F8FttCttT11B.1.1.1740.003378
ORF3a8F8FttCttT11B.1.1.1760.000439
ORF3a8F8FttCttT11B.1.1.2280.003049
ORF3a8F8LTtcCtc11B.1.1.2360.006897
ORF3a8F8FttCttT11B.1.1.250.000569
ORF3a8F8FttCttT11B.1.1.2550.00303
ORF3a8F8FttCttT11B.1.1.2630.001558
ORF3a8F8delTTC---11B.1.1.2840.000107
ORF3a8F8FttCttT11B.1.1.2910.000742
ORF3a8F8delTTC---11B.1.1.2980.000862
ORF3a8F8delTTC---11B.1.1.3010.001179
ORF3a8F8FttCttT11B.1.1.3010.001179
ORF3a8F8FttCttT11B.1.1.3110.000358
ORF3a8F8FttCttT11B.1.1.3160.000925
ORF3a8F8FttCttT11B.1.1.3250.025641
ORF3a8F8delTTC---11B.1.1.370.000193
ORF3a8F8FttCttT11B.1.1.3760.005952
ORF3a8F8FttCttT11B.1.1.3970.002252
ORF3a8F8delTTC---11B.1.1.4090.002833
ORF3a8F8FttCttT11B.1.1.4160.000905
ORF3a8F8FttCttT11B.1.1.4190.007407
ORF3a8F8FttCttT11B.1.1.5070.008696
ORF3a8F8ITtcAtc11B.1.110.30.000718
ORF3a8F8delTTC---11B.1.160.230.004831
ORF3a8F8delTTC---11B.1.177.100.000878
ORF3a8F8delTTC---11B.1.177.190.001431
ORF3a8F8FttCttT11B.1.177.310.011494
ORF3a8F8delTTC---11B.1.177.40.000211
ORF3a8F8del2TTc--c11B.1.177.540.000606
ORF3a8F8delTTC---11B.1.177.570.000281
ORF3a8F8delTTC---11B.1.177.630.002703
ORF3a8F8delTTC---11B.1.177.690.001484
ORF3a8F8delTTC---11B.1.177.760.002494
ORF3a8F8del1ttCtt-11B.1.177.830.001481
ORF3a8F8LTtcCtc11B.1.177.860.000183
ORF3a8F8FttCttT11B.1.177.870.000728
ORF3a8F8del1ttCtt-11B.1.20.000009
ORF3a8F8delTTC---11B.1.221.10.002907
ORF3a8F8FttCttT11B.1.221.40.004167
ORF3a8F8StTctCc11B.1.230.006061
ORF3a8F8FttCttT11B.1.2580.000067
ORF3a8F8FttCttT11B.1.258.230.02381
ORF3a8F8LTtcCtc11B.1.2790.000514
ORF3a8F8FttCttT11B.1.3240.001605
ORF3a8F8FttCttT11B.1.351.20.000303
ORF3a8F8FttCttT11B.1.351.50.0006
ORF3a8F8delTTC---11B.1.36.180.00042
ORF3a8F8FttCttT11B.1.36.350.002604
ORF3a8F8FttCttT11B.1.36.380.001642
ORF3a8F8FttCttT11B.1.3870.04
ORF3a8F8FttCttT11B.1.3970.004854
ORF3a8F8delTTC---11B.1.4090.000781
ORF3a8F8FttCttT11B.1.4130.004255
ORF3a8F8LTtcCtc11B.1.4260.001009
ORF3a8F8delTTC---11B.1.4270.00005
ORF3a8F8YtTctAc11B.1.4290.000024
ORF3a8F8StTctCc11B.1.4290.000024
ORF3a8F8FttCttT11B.1.4710.002732
ORF3a8F8FttCttT11B.1.4800.002488
ORF3a8F8LttCttA11B.1.5250.000113
ORF3a8F8delTTC---11B.1.5250.000113
ORF3a8F8delTTC---11B.1.5260.000024
ORF3a8F8FttCttT11B.1.5440.006024
ORF3a8F8FttCttT11B.1.5490.007194
ORF3a8F8LttCttA11B.1.5500.013699
ORF3a8F8FttCttT11B.1.5510.00129
ORF3a8F8delTTC---11B.1.5610.000397
ORF3a8F8FttCttT11B.1.575.10.002439
ORF3a8F8FttCttT11B.1.5760.000907
ORF3a8F8delTTC---11B.1.5770.000687
ORF3a8F8FttCttT11B.1.5810.009434
ORF3a8F8FttCttT11B.1.5820.000491
ORF3a8F8FttCttT11B.1.6020.006536
ORF3a8F8FttCttT11B.1.617.10.000129
ORF3a8F8FttCttT11B.1.619.10.000641
ORF3a8F8FttCttT11B.1.6230.000536
ORF3a8F8LttCttA11B.1.6280.000352
ORF3a8F8del1ttCtt-11B.1.6370.000073
ORF3a8F8FttCttT11B.1.6370.000073
ORF3a8F8delTTC---11B.1.6380.052632
ORF3a8F8FttCttT11B.1.9.50.005682
ORF3a8F8FttCttT11B.410.008
ORF3a8F8LttCttA11B.60.00091
ORF3a8F8LttCttA11B.6.60.000889
ORF3a8F8delTTC---11C.370.000116
ORF3a8F8LTtcCtc11D.20.000075
ORF3a8F8FttCttT11D.20.000075
ORF3a8F8StTctCc11D.20.000075
ORF3a8F8VTtcGtc11D.20.000075
ORF3a8F8FttCttT11N.10.016949
ORF3a8F8FttCttT11N.40.004255
ORF3a8F8delTTC---11P.10.000016
ORF3a8F8LttCttA11P.10.000016
ORF3a8F8StTctCc11P.1.150.000232
ORF3a8F8delTTC---11P.1.150.000232
ORF3a8F8FttCttT11P.1.170.000162
ORF3a8F8FttCttT11P.1.20.001156
ORF3a8F8LTtcCtc11P.1.20.001156
ORF3a8F8FttCttT11P.1.60.001946
ORF3a8F8FttCttT11Q.40.000455
ORF3a8F8FttCttT11Q.80.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.