CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 72

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a72A72SnonsynGcaTca606860630.99917625606-25608
ORF3a72A72SnonsynGCAAGC606830.00049439725606-25608
ORF3a72A72SnonsynGcATcT606820.00032959825606-25608
ORF3a72A72TnonsynGcaAca135113460.99629925606-25608
ORF3a72A72TnonsynGcAAcC135150.0037009625606-25608
ORF3a72A72VnonsyngCagTa3773750.99469525606-25608
ORF3a72A72VnonsyngCAgTT37720.0053050425606-25608
ORF3a72A72PnonsynGcaCca2172160.99539225606-25608
ORF3a72A72PnonsynGcACcC21710.0046082925606-25608
ORF3a72A72AsyngcAgcG102510.525606-25608
ORF3a72A72AsyngcAgcT102280.2745125606-25608
ORF3a72A72AsyngcAgcC102230.2254925606-25608
ORF3a72A72deldelGCA---5656125606-25608
ORF3a72A72EnonsyngCagAa12110.91666725606-25608
ORF3a72A72EnonsyngCAgAG1210.083333325606-25608
ORF3a72A72GnonsyngCagGa1080.825606-25608
ORF3a72A72GnonsyngCAgGC1020.225606-25608
ORF3a72A72DnonsyngCAgAC66125606-25608
ORF3a72A72LnonsynGCaTTa430.7525606-25608
ORF3a72A72del1delgcAgc-420.525606-25608
ORF3a72A72LnonsynGCATTG410.2525606-25608
ORF3a72A72del1delGca-ca410.2525606-25608
ORF3a72A72del1delGcA-cC410.2525606-25608
ORF3a72A72KnonsynGCaAAa22125606-25608
ORF3a72A72QnonsynGCaCAa22125606-25608
ORF3a72A72RnonsynGCaAGa22125606-25608
ORF3a72A72FnonsynGCATTT22125606-25608
ORF3a72A72HnonsynGCACAC11125606-25608
ORF3a72A72NnonsynGCAAAC11125606-25608

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a72A72SGcaTca60636068All0.00116
ORF3a72A72SGCAAGC36068All0.000001
ORF3a72A72SGcATcT26068All0
ORF3a72A72SGcaTca27652765B.1.2580.184002
ORF3a72A72TGcaAca13461351All0.000257
ORF3a72A72TGcAAcC51351All0.000001
ORF3a72A72SGcaTca563563B.1.1.70.000504
ORF3a72A72SGcaTca445445B.1.3510.013228
ORF3a72A72TGcaAca441441B.1.1.70.000395
ORF3a72A72VgCagTa375377All0.000072
ORF3a72A72VgCAgTT2377All0
ORF3a72A72TGcaAca332332AY.440.002021
ORF3a72A72SGcaTca329329B.1.160.140.697034
ORF3a72A72SGcaTca259259B.10.002372
ORF3a72A72SGcaTca245245AY.40.000381
ORF3a72A72PGcaCca216217All0.000041
ORF3a72A72PGcACcC1217All0
ORF3a72A72PGcaCca136136AY.40.000212
ORF3a72A72SGcaTca124124B.1.617.20.000467
ORF3a72A72SGcaTca118118B.1.4290.002776
ORF3a72A72AgcAgcG51102All0.00001
ORF3a72A72AgcAgcT28102All0.000005
ORF3a72A72AgcAgcC23102All0.000004
ORF3a72A72TGcaAca102102AY.40.000159
ORF3a72A72SGcaTca9090B.1.1511
ORF3a72A72VgCagTa8080B.1.1.70.000072
ORF3a72A72SGcaTca7373AY.430.000323
ORF3a72A72SGcaTca7070AY.1030.000435
ORF3a72A72SGcaTca6868AY.1130.009682
ORF3a72A72TGcaAca6868B.1.617.20.000256
ORF3a72A72SGcaTca6464B.1.1770.000843
ORF3a72A72SGcaTca5757B.1.10.001034
ORF3a72A72delGCA---5656All0.000011
ORF3a72A72TGcaAca5454B.1.177.860.009906
ORF3a72A72SGcaTca5151P.1.140.002438
ORF3a72A72SGcaTca5050AY.440.000304
ORF3a72A72TGcaAca4242B.1.4290.000988
ORF3a72A72SGcaTca4040B.1.1600.001248
ORF3a72A72VgCagTa3737P.1.140.001769
ORF3a72A72VgCagTa3535AY.250.000211
ORF3a72A72TGcaAca3232AY.1020.000848
ORF3a72A72SGcaTca3131B0.003962
ORF3a72A72SGcaTca3030AY.4.20.000651
ORF3a72A72SGcaTca2929AY.390.000717
ORF3a72A72SGcaTca2929B.1.20.000255
ORF3a72A72SGcaTca2727AY.1020.000716
ORF3a72A72TGcaAca2727B.1.20.000238
ORF3a72A72VgCagTa2626AY.260.000736
ORF3a72A72PGcaCca2222AY.1130.003133
ORF3a72A72TGcaAca2121AY.250.000126
ORF3a72A72SGcaTca2020P.10.000315
ORF3a72A72SGcaTca1919B.1.4270.000959
ORF3a72A72SGcaTca1818B.1.1.3330.019376
ORF3a72A72SGcaTca1616AY.260.000453
ORF3a72A72VgCagTa1616B.10.000147
ORF3a72A72SGcaTca1515AY.250.00009
ORF3a72A72TGcaAca1515AY.430.000066
ORF3a72A72SGcaTca1515B.1.617.10.001934
ORF3a72A72SGcaTca1414AY.290.000221
ORF3a72A72VgCagTa1414B.1.617.20.000053
ORF3a72A72SGcaTca1313AY.50.000268
ORF3a72A72VgCagTa1313AY.590.006886
ORF3a72A72VgCagTa1313B.1.4290.000306
ORF3a72A72TGcaAca1313P.10.000205
ORF3a72A72EgCagAa1112All0.000002
ORF3a72A72EgCAgAG112All0
ORF3a72A72SGcaTca1212AY.1190.000424
ORF3a72A72AgcAgcG1212AY.250.000072
ORF3a72A72AgcAgcG912B.1.1.70.000008
ORF3a72A72AgcAgcT312B.1.1.70.000003
ORF3a72A72SGcaTca1111A0.004257
ORF3a72A72TGcaAca1111AY.60.000452
ORF3a72A72TGcaAca1111B.1.10.0002
ORF3a72A72delGCA---1111B.1.1.70.00001
ORF3a72A72GgCagGa810All0.000002
ORF3a72A72GgCAgGC210All0
ORF3a72A72VgCagTa1010AU.20.024213
ORF3a72A72SGcaTca1010AY.160.003797
ORF3a72A72SGcaTca1010AY.30.000099
ORF3a72A72PGcaCca1010AY.430.000044
ORF3a72A72TGcaAca1010B.1.1.500.006789
ORF3a72A72PGcaCca1010B.1.1.70.000009
ORF3a72A72VgCagTa1010B.1.20.000088
ORF3a72A72SGcaTca1010B.1.466.20.003912
ORF3a72A72TGcaAca99AY.540.000858
ORF3a72A72VgCagTa99AY.99.20.000829
ORF3a72A72SGcaTca88AY.1200.000297
ORF3a72A72SGcaTca88AY.230.000558
ORF3a72A72VgCagTa88AY.39.10.000317
ORF3a72A72AgcAgcT88B.1.5960.000697
ORF3a72A72PGcaCca88P.10.000126
ORF3a72A72TGcaAca470.222222
ORF3a72A72TGcAAcC370.166667
ORF3a72A72TGcaAca77AY.1030.000043
ORF3a72A72TGcaAca77AY.30.00007
ORF3a72A72SGcaTca77AY.410.002058
ORF3a72A72TGcaAca67B.10.000055
ORF3a72A72TGcAAcC17B.10.000009
ORF3a72A72TGcaAca77B.1.1.2180.053846
ORF3a72A72AgcAgcG67B.1.1770.000079
ORF3a72A72AgcAgcT17B.1.1770.000013
ORF3a72A72SGCAAGC260.111111
ORF3a72A72SGcATcT260.111111
ORF3a72A72SGcaTca260.111111
ORF3a72A72DgCAgAC66All0.000001
ORF3a72A72VgCagTa66AY.140.000528
ORF3a72A72SGcaTca66AY.200.000233
ORF3a72A72VgCagTa66AY.430.000027
ORF3a72A72TGcaAca66AY.470.000187
ORF3a72A72SGcaTca66AY.980.000474
ORF3a72A72TGcaAca66B.1.1.280.001867
ORF3a72A72TGcaAca66B.1.1.3060.00263
ORF3a72A72SGcaTca66C.90.181818
ORF3a72A72AgcAgcC350.166667
ORF3a72A72AgcAgcT250.111111
ORF3a72A72AgcAgcG55A.23.10.003521
ORF3a72A72VgCagTa55AY.1030.000031
ORF3a72A72SGcaTca55AY.140.00044
ORF3a72A72PGcaCca55AY.250.00003
ORF3a72A72SGcaTca55AY.340.000485
ORF3a72A72SGcaTca55AY.360.000741
ORF3a72A72VgCagTa55AY.40.000008
ORF3a72A72AgcAgcC55AY.600.00469
ORF3a72A72TGcaAca55AY.610.000524
ORF3a72A72PGcaCca45B.10.000037
ORF3a72A72PGcACcC15B.10.000009
ORF3a72A72delGCA---55B.1.1770.000066
ORF3a72A72SGcaTca55B.1.5260.000118
ORF3a72A72AgcAgcG35B.1.617.20.000011
ORF3a72A72AgcAgcC15B.1.617.20.000004
ORF3a72A72AgcAgcT15B.1.617.20.000004
ORF3a72A72SGcaTca55P.1.150.001162
ORF3a72A72GgCagGa240.111111
ORF3a72A72VgCagTa240.111111
ORF3a72A72VgCAgTT240.111111
ORF3a72A72GgCAgGC240.111111
ORF3a72A72LGCaTTa34All0.000001
ORF3a72A72del1gcAgc-24All0
ORF3a72A72del1GcA-cC14All0
ORF3a72A72del1Gca-ca14All0
ORF3a72A72LGCATTG14All0
ORF3a72A72VgCagTa44AY.1190.000141
ORF3a72A72TGcaAca44AY.230.000279
ORF3a72A72TGcaAca44AY.290.000063
ORF3a72A72delGCA---44AY.40.000006
ORF3a72A72SGcaTca44AY.450.000487
ORF3a72A72AgcAgcG44AY.46.40.000658
ORF3a72A72SGcaTca44AY.60.000165
ORF3a72A72PGcaCca44B0.000511
ORF3a72A72VgCagTa44B.1.10.000073
ORF3a72A72SGcaTca44B.1.1.3970.009009
ORF3a72A72TGcaAca44B.1.1600.000125
ORF3a72A72SGcaTca44B.1.2210.000284
ORF3a72A72SGcaTca44B.1.2430.000278
ORF3a72A72SGcaTca44B.1.258.210.031008
ORF3a72A72SGcaTca44B.1.360.000584
ORF3a72A72TGcaAca44B.1.4270.000202
ORF3a72A72SGcaTca44B.1.4590.016327
ORF3a72A72SGcaTca44B.1.4690.01444
ORF3a72A72TGcaAca44B.1.5960.000349
ORF3a72A72SGcaTca44B.1.6090.001918
ORF3a72A72PGcaCca44B.1.617.20.000015
ORF3a72A72TGcaAca44P.1.60.007782
ORF3a72A72TGcaAca44P.1.70.001277
ORF3a72A72SGcaTca44P.30.00638
ORF3a72A72SGcaTca33AY.1080.003308
ORF3a72A72AgcAgcC33AY.210.005693
ORF3a72A72VgCagTa33AY.230.000209
ORF3a72A72SGcaTca33AY.270.000194
ORF3a72A72SGcaTca33AY.330.0002
ORF3a72A72AgcAgcT23AY.430.000009
ORF3a72A72AgcAgcG13AY.430.000004
ORF3a72A72SGcaTca33AY.46.50.000595
ORF3a72A72SGcaTca33AY.5.40.00083
ORF3a72A72VgCagTa33AY.60.000123
ORF3a72A72SGcaTca33AY.750.000168
ORF3a72A72SGcaTca33AY.780.004622
ORF3a72A72AgcAgcT33AY.9.10.000251
ORF3a72A72SGcaTca33AY.9.20.00011
ORF3a72A72EgCagAa33B.10.000027
ORF3a72A72delGCA---33B.10.000027
ORF3a72A72GgCagGa33B.1.10.000054
ORF3a72A72SGcaTca33B.1.1.2140.000166
ORF3a72A72SGcaTca33B.1.1.390.001529
ORF3a72A72SGcaTca33B.1.1390.002199
ORF3a72A72TGcaAca33B.1.160.110.017143
ORF3a72A72VgCagTa33B.1.1770.00004
ORF3a72A72SGcaTca33B.1.177.120.000455
ORF3a72A72VgCagTa33B.1.177.750.003122
ORF3a72A72SGcaTca33B.1.2180.015464
ORF3a72A72TGcaAca23B.1.2210.000142
ORF3a72A72TGcAAcC13B.1.2210.000071
ORF3a72A72SGcaTca33B.1.2220.005076
ORF3a72A72VgCagTa33B.1.2410.002435
ORF3a72A72TGcaAca33B.1.2580.0002
ORF3a72A72SGcaTca33B.1.258.110.001189
ORF3a72A72SGcaTca33B.1.3590.068182
ORF3a72A72TGcaAca33B.1.36.290.001552
ORF3a72A72TGcaAca33B.1.5250.000339
ORF3a72A72SGcaTca33B.1.6210.000266
ORF3a72A72SGcaTca33B.260.044118
ORF3a72A72SGcaTca33C.370.000348
ORF3a72A72SGcaTca33P.1.70.000958
ORF3a72A72delGCA---33U.30.011583
ORF3a72A72LGCaTTa220.111111
ORF3a72A72FGCATTT220.111111
ORF3a72A72RGCaAGa220.111111
ORF3a72A72SGcaTca22A.20.001324
ORF3a72A72SGcaTca22A.23.10.001408
ORF3a72A72AgcAgcC22A.270.003311
ORF3a72A72SGcaTca22A.290.010638
ORF3a72A72SGcaTca22AD.20.000438
ORF3a72A72QGCaCAa22All0
ORF3a72A72RGCaAGa22All0
ORF3a72A72FGCATTT22All0
ORF3a72A72KGCaAAa22All0
ORF3a72A72SGcaTca22AY.10.000791
ORF3a72A72SGcaTca22AY.100.00106
ORF3a72A72PGcaCca22AY.1020.000053
ORF3a72A72VgCagTa22AY.1020.000053
ORF3a72A72TGcaAca22AY.116.10.000623
ORF3a72A72SGcaTca22AY.1170.000169
ORF3a72A72TGcaAca22AY.1190.000071
ORF3a72A72VgCagTa22AY.120.10.000642
ORF3a72A72delGCA---22AY.230.000139
ORF3a72A72AgcAgcT22AY.260.000057
ORF3a72A72SGcaTca22AY.29.10.000441
ORF3a72A72VgCagTa22AY.30.00002
ORF3a72A72TGcaAca22AY.350.000466
ORF3a72A72AgcAgcC22AY.360.000296
ORF3a72A72delGCA---22AY.4.50.000215
ORF3a72A72SGcaTca22AY.4.50.000215
ORF3a72A72VgCagTa22AY.4.50.000215
ORF3a72A72DgCAgAC22AY.430.000009
ORF3a72A72delGCA---22AY.430.000009
ORF3a72A72AgcAgcC22AY.440.000012
ORF3a72A72TGcaAca22AY.460.000208
ORF3a72A72SGcaTca22AY.460.000208
ORF3a72A72TGcaAca22AY.50.000041
ORF3a72A72SGcaTca22AY.590.001059
ORF3a72A72SGcaTca22AY.610.00021
ORF3a72A72SGcaTca22AY.7.10.000225
ORF3a72A72TGcaAca22AY.710.00095
ORF3a72A72SGcaTca22AY.710.00095
ORF3a72A72VgCagTa22AY.840.000875
ORF3a72A72VgCagTa22AY.980.000158
ORF3a72A72SGcaTca22AY.98.10.000097
ORF3a72A72SGcaTca22AY.990.002099
ORF3a72A72AgcAgcC12B.10.000009
ORF3a72A72AgcAgcG12B.10.000009
ORF3a72A72delGCA---22B.1.10.000036
ORF3a72A72SGcaTca22B.1.1.1530.002191
ORF3a72A72SGcaTca22B.1.1.1700.002494
ORF3a72A72SGcaTca22B.1.1.2040.006079
ORF3a72A72VgCagTa22B.1.1.2160.001781
ORF3a72A72SGcaTca22B.1.1.280.000622
ORF3a72A72SGcaTca22B.1.1.3060.000877
ORF3a72A72SGcaTca22B.1.1.3180.000604
ORF3a72A72AgcAgcG22B.1.1.3180.000604
ORF3a72A72TGcaAca22B.1.1.330.000842
ORF3a72A72SGcaTca22B.1.1.3750.02381
ORF3a72A72VgCagTa22B.1.1.3850.008929
ORF3a72A72SGcaTca22B.1.1.4200.002012
ORF3a72A72SGcaTca22B.1.1.4340.000697
ORF3a72A72SGcaTca22B.1.1.500.001358
ORF3a72A72VgCagTa22B.1.1.500.001358
ORF3a72A72SGcaTca22B.1.1.700.000682
ORF3a72A72SGcaTca22B.1.160.300.005952
ORF3a72A72TGcaAca22B.1.1770.000026
ORF3a72A72TGcaAca22B.1.177.180.00232
ORF3a72A72SGcaTca22B.1.177.600.000437
ORF3a72A72VgCagTa22B.1.177.770.001452
ORF3a72A72VgCagTa22B.1.177.810.000379
ORF3a72A72VgCagTa22B.1.177.860.000367
ORF3a72A72AgcAgcT22B.1.20.000018
ORF3a72A72del1GcA-cC12B.1.20.000009
ORF3a72A72del1gcAgc-12B.1.20.000009
ORF3a72A72VgCagTa22B.1.2430.000139
ORF3a72A72PGcaCca22B.1.2580.000133
ORF3a72A72SGcaTca22B.1.258.20.009009
ORF3a72A72SGcaTca22B.1.351.20.000605
ORF3a72A72TGcaAca22B.1.360.000292
ORF3a72A72TGcaAca22B.1.36.10.002281
ORF3a72A72SGcaTca22B.1.36.290.001035
ORF3a72A72SGcaTca22B.1.3690.00057
ORF3a72A72VgCagTa22B.1.438.10.000215
ORF3a72A72TGcaAca22B.1.438.10.000215
ORF3a72A72SGcaTca22B.1.5250.000226
ORF3a72A72delGCA---22B.1.617.20.000008
ORF3a72A72VgCagTa22C.110.021277
ORF3a72A72TGcaAca22P.1.150.000465
ORF3a72A72SGcaTca22Q.10.000253
ORF3a72A72QGCaCAa110.055556
ORF3a72A72KGCaAAa110.055556
ORF3a72A72EgCagAa110.055556
ORF3a72A72PGcaCca110.055556
ORF3a72A72SGcaTca11A.10.000282
ORF3a72A72SGcaTca11A.210.00277
ORF3a72A72delGCA---11AD.20.000219
ORF3a72A72delGCA---11AH.30.003802
ORF3a72A72NGCAAAC11All0
ORF3a72A72HGCACAC11All0
ORF3a72A72AgcAgcG11AY.1030.000006
ORF3a72A72AgcAgcG11AY.1040.001984
ORF3a72A72delGCA---11AY.1110.000183
ORF3a72A72SGcaTca11AY.1160.000287
ORF3a72A72VgCagTa11AY.1170.000085
ORF3a72A72SGcaTca11AY.1180.000063
ORF3a72A72SGcaTca11AY.120.000316
ORF3a72A72TGcaAca11AY.1200.000037
ORF3a72A72SGcaTca11AY.1210.000135
ORF3a72A72TGcaAca11AY.140.000088
ORF3a72A72VgCagTa11AY.160.00038
ORF3a72A72TGcaAca11AY.16.10.00047
ORF3a72A72TGcaAca11AY.200.000039
ORF3a72A72VgCagTa11AY.200.000039
ORF3a72A72SGcaTca11AY.240.000431
ORF3a72A72delGCA---11AY.250.000006
ORF3a72A72TGcaAca11AY.260.000028
ORF3a72A72PGcaCca11AY.290.000016
ORF3a72A72DgCAgAC11AY.30.00001
ORF3a72A72SGcaTca11AY.3.10.000085
ORF3a72A72TGcaAca11AY.320.000532
ORF3a72A72delGCA---11AY.330.000067
ORF3a72A72AgcAgcG11AY.330.000067
ORF3a72A72VgCagTa11AY.340.000097
ORF3a72A72TGcaAca11AY.360.000148
ORF3a72A72AgcAgcT11AY.390.000025
ORF3a72A72delGCA---11AY.390.000025
ORF3a72A72TGcaAca11AY.390.000025
ORF3a72A72SGcaTca11AY.39.10.00004
ORF3a72A72GgCagGa11AY.40.000002
ORF3a72A72EgCagAa11AY.40.000002
ORF3a72A72delGCA---11AY.4.20.000022
ORF3a72A72EgCagAa11AY.4.20.000022
ORF3a72A72TGcaAca11AY.4.20.000022
ORF3a72A72TGcaAca11AY.4.2.10.000149
ORF3a72A72TGcaAca11AY.4.30.000842
ORF3a72A72SGcaTca11AY.400.000964
ORF3a72A72SGcaTca11AY.420.00004
ORF3a72A72EgCagAa11AY.420.00004
ORF3a72A72EgCAgAG11AY.430.000004
ORF3a72A72VgCagTa11AY.440.000006
ORF3a72A72EgCagAa11AY.440.000006
ORF3a72A72DgCAgAC11AY.440.000006
ORF3a72A72AgcAgcG11AY.450.000122
ORF3a72A72TGcaAca11AY.450.000122
ORF3a72A72AgcAgcT11AY.460.000104
ORF3a72A72SGcaTca11AY.46.30.000934
ORF3a72A72PGcaCca11AY.46.60.000072
ORF3a72A72SGcaTca11AY.470.000031
ORF3a72A72TGcaAca11AY.490.003195
ORF3a72A72SGcaTca11AY.490.003195
ORF3a72A72VgCagTa11AY.490.003195
ORF3a72A72AgcAgcC11AY.50.000021
ORF3a72A72TGcaAca11AY.5.40.000277
ORF3a72A72TGcaAca11AY.520.000814
ORF3a72A72SGcaTca11AY.530.000288
ORF3a72A72VgCagTa11AY.550.000917
ORF3a72A72SGcaTca11AY.550.000917
ORF3a72A72TGcaAca11AY.590.00053
ORF3a72A72TGcaAca11AY.640.000595
ORF3a72A72delGCA---11AY.670.000464
ORF3a72A72SGcaTca11AY.680.000274
ORF3a72A72TGcaAca11AY.690.000187
ORF3a72A72TGcaAca11AY.700.000209
ORF3a72A72VgCagTa11AY.710.000475
ORF3a72A72SGcaTca11AY.770.001127
ORF3a72A72LGCATTG11AY.790.001211
ORF3a72A72VgCagTa11AY.820.001357
ORF3a72A72SGcaTca11AY.90.000068
ORF3a72A72delGCA---11AY.90.000068
ORF3a72A72SGcaTca11AY.9.10.000084
ORF3a72A72VgCagTa11AY.9.10.000084
ORF3a72A72PGcaCca11AY.9.20.000037
ORF3a72A72SGcaTca11AY.900.000684
ORF3a72A72SGcaTca11AY.920.000287
ORF3a72A72TGcaAca11AY.920.000287
ORF3a72A72VgCagTa11AY.960.002075
ORF3a72A72TGcaAca11AY.980.000079
ORF3a72A72AgcAgcG11AY.980.000079
ORF3a72A72TGcaAca11AY.98.10.000048
ORF3a72A72delGCA---11AY.990.001049
ORF3a72A72SGcaTca11AY.99.20.000092
ORF3a72A72TGcaAca11B0.000128
ORF3a72A72KGCaAAa11B.10.000009
ORF3a72A72NGCAAAC11B.10.000009
ORF3a72A72DgCAgAC11B.10.000009
ORF3a72A72QGCaCAa11B.10.000009
ORF3a72A72HGCACAC11B.10.000009
ORF3a72A72PGcaCca11B.1.10.000018
ORF3a72A72AgcAgcG11B.1.10.000018
ORF3a72A72VgCagTa11B.1.1.10.000327
ORF3a72A72SGcaTca11B.1.1.10.000327
ORF3a72A72SGCAAGC11B.1.1.1390.022727
ORF3a72A72SGcaTca11B.1.1.1740.003378
ORF3a72A72SGcaTca11B.1.1.1890.001513
ORF3a72A72VgCagTa11B.1.1.2140.000055
ORF3a72A72SGcaTca11B.1.1.2160.00089
ORF3a72A72TGcaAca11B.1.1.2200.001859
ORF3a72A72TGcaAca11B.1.1.2220.000204
ORF3a72A72SGcaTca11B.1.1.2220.000204
ORF3a72A72VgCagTa11B.1.1.2300.009174
ORF3a72A72SGcaTca11B.1.1.2410.00207
ORF3a72A72SGcaTca11B.1.1.250.000569
ORF3a72A72SGcaTca11B.1.1.3010.001179
ORF3a72A72VgCagTa11B.1.1.370.000193
ORF3a72A72VgCagTa11B.1.1.390.00051
ORF3a72A72delGCA---11B.1.1.4090.002833
ORF3a72A72SGcaTca11B.1.1.4640.001473
ORF3a72A72PGcaCca11B.1.1.4640.001473
ORF3a72A72SGcaTca11B.1.1.5190.00004
ORF3a72A72PGcaCca11B.1.1.5190.00004
ORF3a72A72GgCagGa11B.1.1.70.000001
ORF3a72A72del1Gca-ca11B.1.1.70.000001
ORF3a72A72TGcaAca11B.1.110.30.000718
ORF3a72A72SGcaTca11B.1.1270.002198
ORF3a72A72TGcaAca11B.1.1280.000635
ORF3a72A72VgCagTa11B.1.1390.000733
ORF3a72A72VgCagTa11B.1.1460.004237
ORF3a72A72SGcaTca11B.1.1570.002985
ORF3a72A72SGcaTca11B.1.160.160.000929
ORF3a72A72SGcaTca11B.1.160.230.004831
ORF3a72A72SGcaTca11B.1.160.290.004219
ORF3a72A72delGCA---11B.1.1610.017241
ORF3a72A72SGcaTca11B.1.177.160.000664
ORF3a72A72SGcaTca11B.1.177.170.000821
ORF3a72A72delGCA---11B.1.177.170.000821
ORF3a72A72SGcaTca11B.1.177.440.000519
ORF3a72A72SGcaTca11B.1.177.60.000977
ORF3a72A72PGcaCca11B.1.177.600.000218
ORF3a72A72SGcaTca11B.1.177.750.001041
ORF3a72A72SGcaTca11B.1.177.860.000183
ORF3a72A72GgCagGa11B.1.20.000009
ORF3a72A72SGcaTca11B.1.2100.002132
ORF3a72A72VgCagTa11B.1.2210.000071
ORF3a72A72LGCaTTa11B.1.2210.000071
ORF3a72A72AgcAgcC11B.1.2210.000071
ORF3a72A72EgCagAa11B.1.2210.000071
ORF3a72A72TGcaAca11B.1.2320.000537
ORF3a72A72AgcAgcC11B.1.2340.000132
ORF3a72A72SGcaTca11B.1.2350.002519
ORF3a72A72TGcaAca11B.1.2400.000216
ORF3a72A72TGcaAca11B.1.2410.000812
ORF3a72A72AgcAgcT11B.1.2430.00007
ORF3a72A72SGcaTca11B.1.258.120.007874
ORF3a72A72SGcaTca11B.1.258.140.00098
ORF3a72A72SGcaTca11B.1.258.150.018868
ORF3a72A72SGcaTca11B.1.258.30.001675
ORF3a72A72SGcaTca11B.1.2840.013158
ORF3a72A72SGcaTca11B.1.2930.0125
ORF3a72A72TGcaAca11B.1.3110.000275
ORF3a72A72SGcaTca11B.1.3260.007576
ORF3a72A72SGcaTca11B.1.3290.000608
ORF3a72A72SGcaTca11B.1.3490.000715
ORF3a72A72SGcaTca11B.1.36.270.000763
ORF3a72A72SGcaTca11B.1.36.350.002604
ORF3a72A72SGcaTca11B.1.3750.00082
ORF3a72A72VgCagTa11B.1.3890.001002
ORF3a72A72SGcaTca11B.1.400.019608
ORF3a72A72delGCA---11B.1.4150.014286
ORF3a72A72SGcaTca11B.1.416.10.001563
ORF3a72A72AgcAgcG11B.1.4270.00005
ORF3a72A72delGCA---11B.1.4290.000024
ORF3a72A72SGcaTca11B.1.4370.020833
ORF3a72A72delGCA---11B.1.4460.02
ORF3a72A72SGcaTca11B.1.4730.019231
ORF3a72A72SGcaTca11B.1.4990.00105
ORF3a72A72SGcaTca11B.1.5160.001957
ORF3a72A72VgCagTa11B.1.5230.002451
ORF3a72A72SGcaTca11B.1.5270.003704
ORF3a72A72delGCA---11B.1.5610.000397
ORF3a72A72SGcaTca11B.1.5680.001111
ORF3a72A72SGcaTca11B.1.575.10.002439
ORF3a72A72delGCA---11B.1.5850.027778
ORF3a72A72TGcaAca11B.1.5990.00365
ORF3a72A72EgCagAa11B.1.617.10.000129
ORF3a72A72del1gcAgc-11B.1.617.20.000004
ORF3a72A72DgCAgAC11B.1.617.20.000004
ORF3a72A72EgCagAa11B.1.617.20.000004
ORF3a72A72TGcaAca11B.1.6210.000089
ORF3a72A72SGcaTca11B.1.6250.002353
ORF3a72A72SGcaTca11B.1.6270.00202
ORF3a72A72SGcaTca11B.1.6320.006711
ORF3a72A72AgcAgcT11B.1.6370.000073
ORF3a72A72delGCA---11B.1.6380.052632
ORF3a72A72AgcAgcG11B.1.6390.021739
ORF3a72A72SGcaTca11B.1.780.008547
ORF3a72A72TGcaAca11B.1.910.002075
ORF3a72A72SGcaTca11B.1.940.027027
ORF3a72A72SGcaTca11B.3.10.001658
ORF3a72A72VgCagTa11B.400.000364
ORF3a72A72VgCagTa11B.550.00295
ORF3a72A72SGcaTca11C.1.20.004255
ORF3a72A72VgCagTa11C.140.004329
ORF3a72A72TGcaAca11C.370.000116
ORF3a72A72SGcaTca11D.20.000075
ORF3a72A72SGcaTca11K.10.02381
ORF3a72A72VgCagTa11P.10.000016
ORF3a72A72AgcAgcC11P.10.000016
ORF3a72A72SGcaTca11P.1.120.000484
ORF3a72A72PGcaCca11P.1.120.000484
ORF3a72A72VgCagTa11P.1.150.000232
ORF3a72A72delGCA---11P.1.150.000232
ORF3a72A72SGcaTca11P.20.000187
ORF3a72A72VgCagTa11Q.10.000126
ORF3a72A72SGcaTca11Q.70.001111
ORF3a72A72SGcaTca11Q.80.000165
ORF3a72A72TGcaAca11Q.80.000165
ORF3a72A72SGcaTca11R.10.00009