CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 7

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a7I7IsynatCatT44887447740.99748325411-25413
ORF3a7I7IsynatCatA448871130.0025174325411-25413
ORF3a7I7LnonsynAtcCtc560560125411-25413
ORF3a7I7VnonsynAtcGtc2712650.9778625411-25413
ORF3a7I7VnonsynAtCGtA27140.014760125411-25413
ORF3a7I7VnonsynAtCGtT27120.0073800725411-25413
ORF3a7I7deldelATC---134134125411-25413
ORF3a7I7FnonsynAtcTtc116830.71551725411-25413
ORF3a7I7FnonsynAtCTtT116330.28448325411-25413
ORF3a7I7TnonsynaTcaCc1031020.99029125411-25413
ORF3a7I7TnonsynaTCaCT10310.0097087425411-25413
ORF3a7I7MnonsynatCatG1818125411-25413
ORF3a7I7del2delATc--c870.87525411-25413
ORF3a7I7del1delatCat-830.37525411-25413
ORF3a7I7del1delaTca-c830.37525411-25413
ORF3a7I7del1delAtc-tc820.2525411-25413
ORF3a7I7del2delaTCa--810.12525411-25413
ORF3a7I7SnonsynaTcaGc77125411-25413
ORF3a7I7NnonsynaTcaAc22125411-25413
ORF3a7I7KnonsynaTCaAA22125411-25413
ORF3a7I7DnonsynATCGAT11125411-25413

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a7I7IatCatT4477444887All0.008564
ORF3a7I7IatCatA11344887All0.000022
ORF3a7I7IatCatT1072910729B.1.6370.783997
ORF3a7I7IatCatT80998099AY.740.936625
ORF3a7I7IatCatT66706670AY.450.811633
ORF3a7I7IatCatT58855886P.10.092712
ORF3a7I7IatCatA15886P.10.000016
ORF3a7I7IatCatT30353073B.1.1.70.002717
ORF3a7I7IatCatA383073B.1.1.70.000034
ORF3a7I7IatCatT11501153AY.40.00179
ORF3a7I7IatCatA31153AY.40.000005
ORF3a7I7IatCatT10801080AY.910.788897
ORF3a7I7IatCatT612616B.10.005606
ORF3a7I7IatCatA4616B.10.000037
ORF3a7I7LAtcCtc560560All0.000107
ORF3a7I7IatCatT488489B.1.1770.006426
ORF3a7I7IatCatA1489B.1.1770.000013
ORF3a7I7IatCatT466466AY.330.031119
ORF3a7I7IatCatT403405B.1.617.20.001517
ORF3a7I7IatCatA2405B.1.617.20.000008
ORF3a7I7IatCatT385386AY.430.001706
ORF3a7I7IatCatA1386AY.430.000004
ORF3a7I7IatCatT375375AY.420.015086
ORF3a7I7IatCatT369373AY.250.002219
ORF3a7I7IatCatA4373AY.250.000024
ORF3a7I7IatCatT354355AY.1030.002198
ORF3a7I7IatCatA1355AY.1030.000006
ORF3a7I7IatCatT301303B.1.1.2140.016693
ORF3a7I7IatCatA2303B.1.1.2140.000111
ORF3a7I7VAtcGtc265271All0.000051
ORF3a7I7VAtCGtA4271All0.000001
ORF3a7I7VAtCGtT2271All0
ORF3a7I7IatCatT242242AY.91.10.98374
ORF3a7I7IatCatT211212B.1.20.001858
ORF3a7I7IatCatA1212B.1.20.000009
ORF3a7I7IatCatT207208B.1.4290.00487
ORF3a7I7IatCatA1208B.1.4290.000024
ORF3a7I7IatCatT172186B.1.258.170.017883
ORF3a7I7IatCatA14186B.1.258.170.001456
ORF3a7I7IatCatT148148B.1.2210.010513
ORF3a7I7LAtcCtc140140B.1.617.20.000527
ORF3a7I7IatCatT140140R.10.012601
ORF3a7I7delATC---134134All0.000026
ORF3a7I7IatCatT120127AY.440.00073
ORF3a7I7IatCatA7127AY.440.000043
ORF3a7I7IatCatT126126P.1.120.060987
ORF3a7I7IatCatT125125AY.340.012121
ORF3a7I7FAtcTtc83116All0.000016
ORF3a7I7FAtCTtT33116All0.000006
ORF3a7I7TaTcaCc102103All0.00002
ORF3a7I7TaTCaCT1103All0
ORF3a7I7IatCatT9797B.1.5260.00228
ORF3a7I7IatCatT9596B.1.10.001723
ORF3a7I7IatCatA196B.1.10.000018
ORF3a7I7VAtcGtc8989B.1.617.20.000335
ORF3a7I7IatCatT8587AY.260.002406
ORF3a7I7IatCatA287AY.260.000057
ORF3a7I7IatCatT8484AY.200.003265
ORF3a7I7IatCatT7272B.1.4270.003636
ORF3a7I7IatCatT6667AY.4.20.001431
ORF3a7I7IatCatA167AY.4.20.000022
ORF3a7I7IatCatT5757AY.30.000567
ORF3a7I7LAtcCtc5656AY.1020.001485
ORF3a7I7IatCatT5555C.310.982143
ORF3a7I7LAtcCtc5454AY.1060.018084
ORF3a7I7IatCatT4949B.1.5680.054444
ORF3a7I7IatCatT4242AY.4.50.004515
ORF3a7I7IatCatT4040B.1.1.4340.013942
ORF3a7I7IatCatT3838AY.210.072106
ORF3a7I7IatCatT3838B.1.1.2610.327586
ORF3a7I7IatCatT3838B.1.5960.003311
ORF3a7I7IatCatT3838P.1.150.008829
ORF3a7I7IatCatT3536B.1.1600.001092
ORF3a7I7IatCatA136B.1.1600.000031
ORF3a7I7IatCatT3636B.1.258.140.035294
ORF3a7I7IatCatT3636P.1.140.001721
ORF3a7I7IatCatT3535AY.1130.004984
ORF3a7I7IatCatT3434A.190.320755
ORF3a7I7IatCatT3434B.1.1.280.010582
ORF3a7I7IatCatT3234B.1.3510.000951
ORF3a7I7IatCatA234B.1.3510.000059
ORF3a7I7VAtcGtc3333AY.1020.000875
ORF3a7I7IatCatT3333AY.9.20.001212
ORF3a7I7delATC---3333B.1.1.70.00003
ORF3a7I7LAtcCtc3232AY.390.000791
ORF3a7I7FAtcTtc3232B.1.177.600.00699
ORF3a7I7FAtCTtT3232B.1.6370.002338
ORF3a7I7IatCatT3031AY.1000.00138
ORF3a7I7IatCatA131AY.1000.000046
ORF3a7I7LAtcCtc3131B.1.1.70.000028
ORF3a7I7IatCatT3030AM.31
ORF3a7I7IatCatT3030B.1.1.3120.057361
ORF3a7I7IatCatT3030B.1.1.370.005786
ORF3a7I7IatCatT2728AY.290.000426
ORF3a7I7IatCatA128AY.290.000016
ORF3a7I7IatCatT2828B.1.2790.014381
ORF3a7I7IatCatT2828B.1.3750.022951
ORF3a7I7IatCatT2727B.1.5610.010719
ORF3a7I7IatCatT2727P.1.10.008577
ORF3a7I7IatCatT2525AY.5.30.008435
ORF3a7I7IatCatT2525N.50.04417
ORF3a7I7IatCatT2424AY.470.000747
ORF3a7I7IatCatT2424B.1.3240.038523
ORF3a7I7IatCatT2122AY.390.000519
ORF3a7I7IatCatA122AY.390.000025
ORF3a7I7IatCatT1921AY.140.001672
ORF3a7I7IatCatA221AY.140.000176
ORF3a7I7IatCatT2121C.36.30.011912
ORF3a7I7IatCatT2020AY.50.000413
ORF3a7I7IatCatT1919AY.1190.000671
ORF3a7I7IatCatT1919AY.230.001325
ORF3a7I7LAtcCtc1919AY.430.000084
ORF3a7I7IatCatT1919B.1.1.5280.091346
ORF3a7I7MatCatG1818All0.000003
ORF3a7I7LAtcCtc1818AY.1200.000669
ORF3a7I7VAtcGtc1718AY.40.000026
ORF3a7I7VAtCGtT118AY.40.000002
ORF3a7I7IatCatT1818B.1.351.30.015776
ORF3a7I7VAtcGtc1818B.1.4270.000909
ORF3a7I7IatCatT1818P.1.170.002912
ORF3a7I7IatCatT1617B0.002045
ORF3a7I7IatCatA117B0.000128
ORF3a7I7IatCatT1717B.1.1.3170.006999
ORF3a7I7IatCatT1717C.360.015483
ORF3a7I7IatCatT1616AY.1200.000595
ORF3a7I7delATC---1616AY.40.000025
ORF3a7I7IatCatT1616AY.60.000658
ORF3a7I7IatCatT1616B.1.1.2840.001718
ORF3a7I7IatCatT1616B.1.1.5190.000635
ORF3a7I7IatCatT1515AY.1210.00203
ORF3a7I7IatCatT1515AY.240.006466
ORF3a7I7LAtcCtc1515AY.40.000023
ORF3a7I7TaTcaCc1515B.1.1.70.000013
ORF3a7I7IatCatT1515B.1.177.70.002473
ORF3a7I7IatCatT1515C.370.001741
ORF3a7I7LAtcCtc1414AY.1210.001894
ORF3a7I7LAtcCtc1414AY.330.000935
ORF3a7I7IatCatT1414AY.750.000784
ORF3a7I7IatCatT1414B.1.177.210.001071
ORF3a7I7IatCatT1414B.1.351.20.004236
ORF3a7I7IatCatT1414B.1.6210.001239
ORF3a7I7delATC---1313AY.4.50.001397
ORF3a7I7IatCatT1313AY.620.005664
ORF3a7I7IatCatT1313AY.860.010788
ORF3a7I7IatCatT1313B.1.1460.055085
ORF3a7I7delATC---1313B.1.1770.000171
ORF3a7I7IatCatT1313B.1.177.860.002385
ORF3a7I7VAtcGtc1313B.1.3460.017038
ORF3a7I7IatCatT1313B.1.3890.013026
ORF3a7I7IatCatT1313B.1.6200.012299
ORF3a7I7IatCatT1212AY.1140.002773
ORF3a7I7IatCatT1212AY.270.000777
ORF3a7I7LAtcCtc1212AY.270.000777
ORF3a7I7LAtcCtc1212AY.4.50.00129
ORF3a7I7IatCatT1212B.1.1.3680.037037
ORF3a7I7IatCatT1112B.1.1.700.003752
ORF3a7I7IatCatA112B.1.1.700.000341
ORF3a7I7IatCatT1212B.1.177.730.006795
ORF3a7I7IatCatT1012B.1.2580.000665
ORF3a7I7IatCatA212B.1.2580.000133
ORF3a7I7IatCatT1212B.1.4990.012605
ORF3a7I7IatCatT1212P.20.00224
ORF3a7I7IatCatT1212Q.10.001516
ORF3a7I7IatCatT1011AY.460.001041
ORF3a7I7IatCatA111AY.460.000104
ORF3a7I7IatCatT1111AY.46.60.000794
ORF3a7I7IatCatT1111AY.570.007218
ORF3a7I7IatCatT1111AY.940.004869
ORF3a7I7FAtcTtc1111B.1.1.70.00001
ORF3a7I7LAtcCtc1111B.1.4270.000555
ORF3a7I7IatCatT1111B.1.5750.003337
ORF3a7I7VAtcGtc1111B.1.621.10.005564
ORF3a7I7IatCatT1010B.1.1.10.003267
ORF3a7I7IatCatT1010B.1.6180.040323
ORF3a7I7IatCatT1010Q.80.001649
ORF3a7I7FAtcTtc99AY.430.00004
ORF3a7I7IatCatT99AY.99.20.000829
ORF3a7I7IatCatT99B.1.1.5070.078261
ORF3a7I7IatCatT99B.1.1.610.078947
ORF3a7I7IatCatT99B.1.2320.004836
ORF3a7I7TaTcaCc99B.1.2580.000599
ORF3a7I7IatCatT99B.1.617.10.001161
ORF3a7I7IatCatT88A.2.50.003992
ORF3a7I7del2ATc--c78All0.000001
ORF3a7I7del1atCat-38All0.000001
ORF3a7I7del1aTca-c38All0.000001
ORF3a7I7del1Atc-tc28All0
ORF3a7I7del2aTCa--18All0
ORF3a7I7LAtcCtc88AY.1160.002294
ORF3a7I7IatCatT88AY.1170.000676
ORF3a7I7LAtcCtc88AY.320.00426
ORF3a7I7IatCatT88AY.39.10.000317
ORF3a7I7TaTcaCc88AY.40.000012
ORF3a7I7IatCatT88AY.590.004237
ORF3a7I7IatCatT88AY.690.001493
ORF3a7I7IatCatT88B.1.1.4870.044693
ORF3a7I7VAtcGtc88B.1.1.70.000007
ORF3a7I7IatCatT88B.1.360.001167
ORF3a7I7IatCatT88B.1.6360.053691
ORF3a7I7IatCatT88D.20.0006
ORF3a7I7SaTcaGc77All0.000001
ORF3a7I7TaTcaCc77AY.110.009371
ORF3a7I7IatCatT77AY.1160.002007
ORF3a7I7LAtcCtc77AY.250.000042
ORF3a7I7VAtcGtc77AY.440.000043
ORF3a7I7IatCatT77AY.90.000473
ORF3a7I7IatCatT77AY.98.10.000339
ORF3a7I7IatCatT77B.1.1.4160.006335
ORF3a7I7IatCatT77B.1.214.20.004197
ORF3a7I7IatCatT77B.1.2980.014799
ORF3a7I7IatCatT77B.1.4960.875
ORF3a7I7IatCatT67B.1.5250.000679
ORF3a7I7IatCatA17B.1.5250.000113
ORF3a7I7TaTcaCc77B.1.5260.000165
ORF3a7I7VAtcGtc77P.10.00011
ORF3a7I7LAtcCtc66AY.10.002374
ORF3a7I7IatCatT66AY.10.002374
ORF3a7I7IatCatT66AY.1090.004438
ORF3a7I7IatCatT56AY.1180.000313
ORF3a7I7IatCatA16AY.1180.000063
ORF3a7I7IatCatT66AY.130.000966
ORF3a7I7LAtcCtc66AY.160.002278
ORF3a7I7LAtcCtc66AY.200.000233
ORF3a7I7VAtcGtc66AY.290.000095
ORF3a7I7LAtcCtc66AY.340.000582
ORF3a7I7FAtcTtc66AY.390.000148
ORF3a7I7LAtcCtc66AY.46.40.000987
ORF3a7I7IatCatT66AY.540.000572
ORF3a7I7IatCatT66AY.550.005505
ORF3a7I7LAtcCtc66AY.75.10.001082
ORF3a7I7IatCatT66AY.880.005305
ORF3a7I7IatCatT66AY.99.10.009317
ORF3a7I7IatCatT66B.1.1.2160.005343
ORF3a7I7IatCatT66B.1.1.2220.001224
ORF3a7I7IatCatT66B.1.1.3110.002149
ORF3a7I7IatCatT66B.1.1.4670.115385
ORF3a7I7VAtcGtc66B.1.1.5190.000238
ORF3a7I7IatCatT66B.1.1280.003812
ORF3a7I7LAtcCtc66B.1.2430.000418
ORF3a7I7IatCatT66B.1.2430.000418
ORF3a7I7IatCatT66B.1.4800.014925
ORF3a7I7IatCatT66B.1.5820.002944
ORF3a7I7TaTcaCc66B.1.617.20.000023
ORF3a7I7FAtcTtc66B.1.617.20.000023
ORF3a7I7IatCatT66B.1.6280.002114
ORF3a7I7IatCatT55AY.1020.000133
ORF3a7I7TaTcaCc55AY.1030.000031
ORF3a7I7IatCatT55AY.1100.000563
ORF3a7I7VAtcGtc55AY.30.00005
ORF3a7I7IatCatT55AY.360.000741
ORF3a7I7VAtcGtc55AY.390.000124
ORF3a7I7IatCatT55AY.480.002326
ORF3a7I7IatCatT55AY.630.001934
ORF3a7I7LAtcCtc55B.10.000046
ORF3a7I7IatCatT55B.1.1.3060.002192
ORF3a7I7IatCatT55B.1.1.630.001929
ORF3a7I7del2ATc--c55B.1.1.70.000004
ORF3a7I7IatCatT55B.1.2060.004078
ORF3a7I7IatCatT55B.1.258.30.008375
ORF3a7I7IatCatT55B.1.36.360.00301
ORF3a7I7IatCatT55B.1.438.10.000536
ORF3a7I7IatCatT55B.1.575.10.012195
ORF3a7I7IatCatT55B.1.6250.011765
ORF3a7I7IatCatT55P.1.130.004492
ORF3a7I7IatCatT55P.1.70.001596
ORF3a7I7IatCatT55V.10.113636
ORF3a7I7VAtCGtA440.222222
ORF3a7I7IatCatT44A.23.10.002817
ORF3a7I7IatCatT44AA.30.108108
ORF3a7I7LAtcCtc44AY.1080.00441
ORF3a7I7delATC---44AY.250.000024
ORF3a7I7IatCatT44AY.3.10.000341
ORF3a7I7TaTcaCc44AY.430.000018
ORF3a7I7MatCatG44AY.440.000024
ORF3a7I7LAtcCtc44AY.460.000416
ORF3a7I7IatCatT44AY.46.10.004107
ORF3a7I7IatCatA34AY.530.000863
ORF3a7I7IatCatT14AY.530.000288
ORF3a7I7IatCatT44AY.560.006421
ORF3a7I7LAtcCtc44AY.650.002132
ORF3a7I7LAtcCtc44AY.810.007968
ORF3a7I7IatCatT44AY.980.000316
ORF3a7I7IatCatT44B.1.1.1280.028369
ORF3a7I7IatCatT44B.1.1.1760.001757
ORF3a7I7IatCatT44B.1.1.3720.002755
ORF3a7I7IatCatT44B.1.1390.002933
ORF3a7I7IatCatT44B.1.1470.003023
ORF3a7I7IatCatT44B.1.2340.000528
ORF3a7I7IatCatT44B.1.3110.001098
ORF3a7I7IatCatT44B.1.3990.007737
ORF3a7I7LAtcCtc44B.1.416.10.00625
ORF3a7I7FAtcTtc44B.1.5960.000349
ORF3a7I7IatCatT44P.1.10.10.03252
ORF3a7I7IatCatT33A.30.006289
ORF3a7I7TaTcaCc33AD.20.000657
ORF3a7I7IatCatT33AE.80.001467
ORF3a7I7VAtcGtc33AY.1030.000019
ORF3a7I7LAtcCtc33AY.1140.000693
ORF3a7I7IatCatT33AY.190.003421
ORF3a7I7LAtcCtc33AY.290.000047
ORF3a7I7IatCatT33AY.29.10.000662
ORF3a7I7IatCatT33AY.350.000699
ORF3a7I7IatCatT33AY.380.001498
ORF3a7I7MatCatG33AY.40.000005
ORF3a7I7VAtcGtc33AY.4.20.000065
ORF3a7I7TaTcaCc33AY.440.000018
ORF3a7I7IatCatT33AY.46.20.001906
ORF3a7I7TaTcaCc33AY.60.000123
ORF3a7I7IatCatT33AY.610.000314
ORF3a7I7IatCatT33AY.670.001393
ORF3a7I7VAtcGtc33AY.750.000168
ORF3a7I7IatCatT33AY.75.10.000541
ORF3a7I7IatCatT33AY.800.003386
ORF3a7I7VAtcGtc33AY.98.10.000145
ORF3a7I7TaTcaCc33B.10.000027
ORF3a7I7SaTcaGc33B.1.1.1700.003741
ORF3a7I7IatCatT33B.1.1.2030.050847
ORF3a7I7IatCatA33B.1.1.3260.005282
ORF3a7I7IatCatT33B.1.1.330.001263
ORF3a7I7IatCatT33B.1.1.3480.002389
ORF3a7I7IatCatT33B.1.1.3840.071429
ORF3a7I7SaTcaGc33B.1.1.70.000003
ORF3a7I7IatCatT33B.1.1310.026316
ORF3a7I7IatCatT33B.1.177.540.001819
ORF3a7I7VAtcGtc33B.1.20.000026
ORF3a7I7IatCatT33B.1.2400.000647
ORF3a7I7IatCatT33B.1.36.170.001482
ORF3a7I7IatCatT33B.1.36.310.005254
ORF3a7I7IatCatT33B.1.6090.001438
ORF3a7I7delATC---33B.1.6090.001438
ORF3a7I7delATC---33B.1.617.20.000011
ORF3a7I7IatCatT33B.1.6190.002613
ORF3a7I7IatCatT33B.1.6230.001609
ORF3a7I7IatCatT33P.1.100.000808
ORF3a7I7IatCatT33Q.50.050847
ORF3a7I7TaTcaCc220.111111
ORF3a7I7KaTCaAA220.111111
ORF3a7I7IatCatT22A.20.001324
ORF3a7I7IatCatT22AD.20.000438
ORF3a7I7KaTCaAA22All0
ORF3a7I7NaTcaAc22All0
ORF3a7I7IatCatT22AM.40.007143
ORF3a7I7VAtcGtc22AY.10.000791
ORF3a7I7TaTcaCc22AY.1020.000053
ORF3a7I7LAtcCtc22AY.1030.000012
ORF3a7I7LAtcCtc22AY.1040.003968
ORF3a7I7IatCatT22AY.1050.001286
ORF3a7I7LAtcCtc22AY.1050.001286
ORF3a7I7IatCatT22AY.1110.000366
ORF3a7I7TaTcaCc22AY.1130.000285
ORF3a7I7IatCatT22AY.160.000759
ORF3a7I7LAtcCtc22AY.190.002281
ORF3a7I7LAtcCtc22AY.280.003781
ORF3a7I7IatCatT22AY.300.000791
ORF3a7I7VAtcGtc22AY.300.000791
ORF3a7I7IatCatT22AY.34.10.00102
ORF3a7I7TaTcaCc22AY.360.000296
ORF3a7I7TaTcaCc22AY.39.10.000079
ORF3a7I7IatCatT22AY.4.30.001684
ORF3a7I7MatCatG22AY.4.50.000215
ORF3a7I7del1Atc-tc22AY.4.50.000215
ORF3a7I7del2ATc--c12AY.440.000006
ORF3a7I7del2aTCa--12AY.440.000006
ORF3a7I7IatCatT12AY.46.50.000198
ORF3a7I7IatCatA12AY.46.50.000198
ORF3a7I7LAtcCtc22AY.46.60.000144
ORF3a7I7LAtcCtc22AY.470.000062
ORF3a7I7LAtcCtc22AY.50.000041
ORF3a7I7IatCatT22AY.580.001815
ORF3a7I7IatCatA12AY.70.000196
ORF3a7I7IatCatT12AY.70.000196
ORF3a7I7IatCatT22AY.730.001331
ORF3a7I7IatCatT22AY.780.003082
ORF3a7I7LAtcCtc22AY.780.003082
ORF3a7I7LAtcCtc22AY.820.002714
ORF3a7I7IatCatT22AY.840.000875
ORF3a7I7IatCatT22AY.850.000854
ORF3a7I7IatCatT22AY.9.10.000167
ORF3a7I7IatCatT22AY.920.000575
ORF3a7I7IatCatT22AY.930.000546
ORF3a7I7IatCatT22AY.950.001522
ORF3a7I7delATC---22B.10.000018
ORF3a7I7TaTcaCc22B.1.10.000036
ORF3a7I7IatCatT22B.1.1.1570.001826
ORF3a7I7IatCatT22B.1.1.250.001137
ORF3a7I7VAtcGtc22B.1.1.3050.007722
ORF3a7I7LAtcCtc22B.1.1.4090.005666
ORF3a7I7IatCatT22B.1.1.4320.002532
ORF3a7I7IatCatT22B.1.1.500.001358
ORF3a7I7IatCatT22B.1.1.510.003436
ORF3a7I7IatCatT22B.1.1.530.027397
ORF3a7I7IatCatT22B.1.1.540.006042
ORF3a7I7MatCatG22B.1.1.70.000002
ORF3a7I7IatCatT22B.1.160.270.030303
ORF3a7I7IatCatT22B.1.177.310.022989
ORF3a7I7IatCatT22B.1.177.350.001382
ORF3a7I7FAtcTtc22B.1.177.40.000422
ORF3a7I7delATC---22B.1.177.40.000422
ORF3a7I7IatCatT22B.1.177.430.002954
ORF3a7I7delATC---22B.1.177.600.000437
ORF3a7I7IatCatT22B.1.177.760.004988
ORF3a7I7IatCatT22B.1.177.810.000379
ORF3a7I7IatCatT22B.1.177.820.000955
ORF3a7I7delATC---22B.1.177.830.002963
ORF3a7I7delATC---22B.1.20.000018
ORF3a7I7MatCatG22B.1.20.000018
ORF3a7I7FAtcTtc22B.1.3510.000059
ORF3a7I7IatCatT22B.1.36.10.002281
ORF3a7I7IatCatT22B.1.36.290.001035
ORF3a7I7IatCatT22B.1.36.80.002
ORF3a7I7IatCatT22B.1.3960.001411
ORF3a7I7IatCatT22B.1.4090.001563
ORF3a7I7IatCatT22B.1.4130.008511
ORF3a7I7LAtcCtc22B.1.4380.013072
ORF3a7I7IatCatT22B.1.4650.007605
ORF3a7I7IatCatT22B.1.4700.002809
ORF3a7I7IatCatT22B.1.5330.019231
ORF3a7I7IatCatT22B.1.5770.001375
ORF3a7I7TaTcaCc22B.1.5950.000522
ORF3a7I7LAtcCtc22B.1.6210.000177
ORF3a7I7del1atCat-22B.1.6370.000146
ORF3a7I7TaTcaCc22P.10.000032
ORF3a7I7IatCatT22P.1.20.002312
ORF3a7I7IatCatT22Q.70.002222
ORF3a7I7TaTcaCc22R.10.00018
ORF3a7I7IatCatT22U.30.007722
ORF3a7I7delATC---22U.30.007722
ORF3a7I7IatCatT11A0.000387
ORF3a7I7TaTcaCc11A.10.000282
ORF3a7I7IatCatT11A.2.5.10.004808
ORF3a7I7IatCatT11A.210.00277
ORF3a7I7IatCatT11AA.20.007692
ORF3a7I7NaTcaAc11AD.20.000219
ORF3a7I7IatCatT11AE.40.043478
ORF3a7I7DATCGAT11All0
ORF3a7I7IatCatT11AY.100.00053
ORF3a7I7FAtcTtc11AY.1000.000046
ORF3a7I7VAtcGtc11AY.1000.000046
ORF3a7I7IatCatT11AY.1010.00049
ORF3a7I7FAtcTtc11AY.1020.000027
ORF3a7I7delATC---11AY.1030.000006
ORF3a7I7delATC---11AY.1050.000643
ORF3a7I7IatCatT11AY.1060.000335
ORF3a7I7IatCatT11AY.1080.001103
ORF3a7I7delATC---11AY.1110.000183
ORF3a7I7VAtcGtc11AY.1170.000085
ORF3a7I7MatCatG11AY.1180.000063
ORF3a7I7TaTcaCc11AY.1190.000035
ORF3a7I7VAtcGtc11AY.1200.000037
ORF3a7I7delATC---11AY.1200.000037
ORF3a7I7IatCatT11AY.120.10.000321
ORF3a7I7FAtcTtc11AY.1210.000135
ORF3a7I7TaTcaCc11AY.200.000039
ORF3a7I7delATC---11AY.230.00007
ORF3a7I7IatCatT11AY.23.10.000417
ORF3a7I7VAtcGtc11AY.240.000431
ORF3a7I7VAtcGtc11AY.250.000006
ORF3a7I7VAtcGtc11AY.260.000028
ORF3a7I7delATC---11AY.260.000028
ORF3a7I7delATC---11AY.290.000016
ORF3a7I7TaTcaCc11AY.30.00001
ORF3a7I7MatCatG11AY.30.00001
ORF3a7I7LAtcCtc11AY.30.00001
ORF3a7I7delATC---11AY.3.10.000085
ORF3a7I7IatCatT11AY.320.000532
ORF3a7I7VAtcGtc11AY.330.000067
ORF3a7I7FAtcTtc11AY.330.000067
ORF3a7I7VAtcGtc11AY.39.10.00004
ORF3a7I7delATC---11AY.39.10.00004
ORF3a7I7FAtcTtc11AY.40.000002
ORF3a7I7SaTcaGc11AY.40.000002
ORF3a7I7IatCatT11AY.4.2.10.000149
ORF3a7I7IatCatT11AY.4.40.000409
ORF3a7I7delATC---11AY.430.000004
ORF3a7I7VAtCGtT11AY.450.000122
ORF3a7I7VAtcGtc11AY.460.000104
ORF3a7I7TaTcaCc11AY.460.000104
ORF3a7I7delATC---11AY.46.20.000635
ORF3a7I7IatCatA11AY.46.40.000165
ORF3a7I7TaTcaCc11AY.46.60.000072
ORF3a7I7FAtcTtc11AY.470.000031
ORF3a7I7delATC---11AY.50.000021
ORF3a7I7IatCatT11AY.5.10.003759
ORF3a7I7LAtcCtc11AY.5.40.000277
ORF3a7I7IatCatT11AY.5.40.000277
ORF3a7I7TaTcaCc11AY.540.000095
ORF3a7I7VAtcGtc11AY.550.000917
ORF3a7I7delATC---11AY.600.000938
ORF3a7I7TaTcaCc11AY.610.000105
ORF3a7I7IatCatT11AY.640.000595
ORF3a7I7IatCatT11AY.660.00107
ORF3a7I7IatCatT11AY.680.000274
ORF3a7I7VAtcGtc11AY.690.000187
ORF3a7I7IatCatT11AY.7.10.000113
ORF3a7I7IatCatT11AY.700.000209
ORF3a7I7IatCatT11AY.720.001361
ORF3a7I7VAtcGtc11AY.740.000116
ORF3a7I7IatCatT11AY.770.001127
ORF3a7I7delATC---11AY.810.001992
ORF3a7I7IatCatT11AY.960.002075
ORF3a7I7MatCatG11AY.980.000079
ORF3a7I7delATC---11AY.990.001049
ORF3a7I7VAtcGtc11AY.99.20.000092
ORF3a7I7IatCatT11AZ.30.00152
ORF3a7I7del1aTca-c11B0.000128
ORF3a7I7VAtcGtc11B.10.000009
ORF3a7I7FAtCTtT11B.10.000009
ORF3a7I7LAtcCtc11B.1.10.000018
ORF3a7I7delATC---11B.1.10.000018
ORF3a7I7DATCGAT11B.1.10.000018
ORF3a7I7VAtcGtc11B.1.10.000018
ORF3a7I7IatCatT11B.1.1.100.001115
ORF3a7I7IatCatT11B.1.1.1410.002012
ORF3a7I7IatCatT11B.1.1.1480.008772
ORF3a7I7IatCatT11B.1.1.1700.001247
ORF3a7I7IatCatT11B.1.1.1740.003378
ORF3a7I7IatCatT11B.1.1.1940.00495
ORF3a7I7IatCatT11B.1.1.2070.001182
ORF3a7I7IatCatT11B.1.1.2090.008929
ORF3a7I7IatCatT11B.1.1.2200.001859
ORF3a7I7IatCatT11B.1.1.2280.003049
ORF3a7I7LAtcCtc11B.1.1.2360.006897
ORF3a7I7IatCatT11B.1.1.2410.00207
ORF3a7I7IatCatT11B.1.1.2790.001121
ORF3a7I7IatCatT11B.1.1.2900.018182
ORF3a7I7IatCatT11B.1.1.2910.000742
ORF3a7I7IatCatT11B.1.1.2940.001266
ORF3a7I7IatCatA11B.1.1.2980.000862
ORF3a7I7IatCatT11B.1.1.3010.001179
ORF3a7I7delATC---11B.1.1.3010.001179
ORF3a7I7IatCatT11B.1.1.3390.010526
ORF3a7I7delATC---11B.1.1.370.000193
ORF3a7I7IatCatA11B.1.1.390.00051
ORF3a7I7IatCatT11B.1.1.3970.002252
ORF3a7I7delATC---11B.1.1.4090.002833
ORF3a7I7IatCatT11B.1.1.4200.001006
ORF3a7I7IatCatT11B.1.1.4330.001425
ORF3a7I7IatCatT11B.1.1.440.00241
ORF3a7I7IatCatT11B.1.1.4480.002033
ORF3a7I7IatCatT11B.1.1.460.004367
ORF3a7I7MatCatG11B.1.1.5190.00004
ORF3a7I7IatCatT11B.1.1.5230.001563
ORF3a7I7IatCatT11B.1.1.5240.020833
ORF3a7I7IatCatT11B.1.1.570.011494
ORF3a7I7del1aTca-c11B.1.1.700.000341
ORF3a7I7IatCatT11B.1.120.008
ORF3a7I7IatCatT11B.1.1260.001276
ORF3a7I7FAtcTtc11B.1.130.002375
ORF3a7I7IatCatT11B.1.1570.002985
ORF3a7I7IatCatT11B.1.160.140.002119
ORF3a7I7delATC---11B.1.160.230.004831
ORF3a7I7IatCatT11B.1.160.250.011111
ORF3a7I7IatCatT11B.1.160.330.004425
ORF3a7I7VAtcGtc11B.1.1700.00431
ORF3a7I7VAtcGtc11B.1.1770.000013
ORF3a7I7FAtcTtc11B.1.1770.000013
ORF3a7I7delATC---11B.1.177.100.000878
ORF3a7I7delATC---11B.1.177.190.001431
ORF3a7I7IatCatT11B.1.177.190.001431
ORF3a7I7IatCatT11B.1.177.50.001242
ORF3a7I7IatCatT11B.1.177.530.002392
ORF3a7I7delATC---11B.1.177.540.000606
ORF3a7I7delATC---11B.1.177.570.000281
ORF3a7I7IatCatT11B.1.177.600.000218
ORF3a7I7IatCatT11B.1.177.690.001484
ORF3a7I7delATC---11B.1.177.690.001484
ORF3a7I7delATC---11B.1.177.760.002494
ORF3a7I7IatCatT11B.1.177.770.000726
ORF3a7I7IatCatT11B.1.177.80.000752
ORF3a7I7IatCatT11B.1.177.830.001481
ORF3a7I7IatCatT11B.1.177.90.001332
ORF3a7I7LAtcCtc11B.1.20.000009
ORF3a7I7FAtcTtc11B.1.20.000009
ORF3a7I7TaTcaCc11B.1.20.000009
ORF3a7I7IatCatT11B.1.2140.003663
ORF3a7I7IatCatT11B.1.2180.005155
ORF3a7I7delATC---11B.1.221.10.002907
ORF3a7I7IatCatT11B.1.2360.002053
ORF3a7I7IatCatT11B.1.2390.001221
ORF3a7I7MatCatG11B.1.2430.00007
ORF3a7I7VAtcGtc11B.1.2430.00007
ORF3a7I7IatCatT11B.1.243.10.022222
ORF3a7I7IatCatT11B.1.2470.014925
ORF3a7I7IatCatT11B.1.258.160.001637
ORF3a7I7IatCatA11B.1.2600.003344
ORF3a7I7IatCatT11B.1.3200.001245
ORF3a7I7IatCatT11B.1.3360.002439
ORF3a7I7LAtcCtc11B.1.3380.008621
ORF3a7I7IatCatT11B.1.3490.000715
ORF3a7I7IatCatT11B.1.3500.002933
ORF3a7I7IatCatT11B.1.3560.001727
ORF3a7I7IatCatT11B.1.36.100.004785
ORF3a7I7IatCatT11B.1.36.180.00042
ORF3a7I7delATC---11B.1.36.180.00042
ORF3a7I7IatCatT11B.1.36.220.001208
ORF3a7I7IatCatA11B.1.3690.000285
ORF3a7I7IatCatT11B.1.4000.000429
ORF3a7I7delATC---11B.1.4090.000781
ORF3a7I7IatCatT11B.1.416.10.001563
ORF3a7I7delATC---11B.1.4270.00005
ORF3a7I7FAtcTtc11B.1.4270.00005
ORF3a7I7TaTcaCc11B.1.4290.000024
ORF3a7I7IatCatT11B.1.4330.003195
ORF3a7I7IatCatT11B.1.4680.005714
ORF3a7I7IatCatT11B.1.4970.000315
ORF3a7I7IatCatT11B.1.5160.001957
ORF3a7I7IatCatT11B.1.5170.000427
ORF3a7I7del1atCat-11B.1.5250.000113
ORF3a7I7IatCatT11B.1.5270.003704
ORF3a7I7FAtcTtc11B.1.5270.003704
ORF3a7I7IatCatT11B.1.5380.008065
ORF3a7I7IatCatT11B.1.5400.009709
ORF3a7I7IatCatT11B.1.5470.02439
ORF3a7I7IatCatT11B.1.5510.00129
ORF3a7I7IatCatT11B.1.5600.00463
ORF3a7I7delATC---11B.1.5610.000397
ORF3a7I7TaTCaCT11B.1.5610.000397
ORF3a7I7IatCatT11B.1.5640.000426
ORF3a7I7IatCatT11B.1.5670.003333
ORF3a7I7delATC---11B.1.5770.000687
ORF3a7I7IatCatT11B.1.5950.000261
ORF3a7I7LAtcCtc11B.1.595.40.007299
ORF3a7I7IatCatT11B.1.6050.005952
ORF3a7I7NaTcaAc11B.1.617.20.000004
ORF3a7I7del2ATc--c11B.1.617.20.000004
ORF3a7I7delATC---11B.1.6370.000073
ORF3a7I7delATC---11B.1.6380.052632
ORF3a7I7IatCatT11B.390.002331
ORF3a7I7LAtcCtc11B.40.002208
ORF3a7I7IatCatT11B.400.000364
ORF3a7I7del1aTca-c11B.550.00295
ORF3a7I7IatCatT11B.580.010204
ORF3a7I7IatCatA11B.60.00091
ORF3a7I7IatCatT11C.260.007353
ORF3a7I7IatCatT11C.300.001727
ORF3a7I7delATC---11C.370.000116
ORF3a7I7VAtcGtc11C.370.000116
ORF3a7I7LAtcCtc11D.20.000075
ORF3a7I7delATC---11P.10.000016
ORF3a7I7LAtcCtc11P.1.140.000048
ORF3a7I7TaTcaCc11P.1.150.000232
ORF3a7I7delATC---11P.1.150.000232
ORF3a7I7IatCatT11P.1.160.000374
ORF3a7I7IatCatT11P.30.001595
ORF3a7I7IatCatT11W.20.004831