CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 60 & Codon = tTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a60S60FnonsyntCctTc42814281125570-25572

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a60S60FtCctTc42814281All0.000819
ORF3a60S60FtCctTc16601660B.1.1.70.001486
ORF3a60S60FtCctTc342342AY.460.035595
ORF3a60S60FtCctTc289289B.1.1.5190.011476
ORF3a60S60FtCctTc272272AY.40.000423
ORF3a60S60FtCctTc230230B.1.617.20.000866
ORF3a60S60FtCctTc147147AY.440.000895
ORF3a60S60FtCctTc142142B.1.2340.018736
ORF3a60S60FtCctTc116116AY.1000.005337
ORF3a60S60FtCctTc9494B.1.1770.001238
ORF3a60S60FtCctTc7575P.10.001182
ORF3a60S60FtCctTc5656AY.1030.000348
ORF3a60S60FtCctTc5252B.1.1600.001622
ORF3a60S60FtCctTc5151B.1.20.000449
ORF3a60S60FtCctTc4646AY.610.00482
ORF3a60S60FtCctTc4444AY.250.000265
ORF3a60S60FtCctTc4242B.10.000385
ORF3a60S60FtCctTc3030AY.290.000473
ORF3a60S60FtCctTc3030B.1.2580.001996
ORF3a60S60FtCctTc2727B.1.4290.000635
ORF3a60S60FtCctTc2424AY.200.000933
ORF3a60S60FtCctTc2424B.1.177.620.028605
ORF3a60S60FtCctTc2020AY.260.000566
ORF3a60S60FtCctTc1919AY.430.000084
ORF3a60S60FtCctTc1919B.1.10.000345
ORF3a60S60FtCctTc1616AY.3.10.001364
ORF3a60S60FtCctTc1616R.10.00144
ORF3a60S60FtCctTc1515AY.1200.000558
ORF3a60S60FtCctTc1515AY.30.000149
ORF3a60S60FtCctTc1515AY.390.000371
ORF3a60S60FtCctTc1414B.1.3510.000416
ORF3a60S60FtCctTc1313B.1.1.2040.039514
ORF3a60S60FtCctTc1212AY.410.003527
ORF3a60S60FtCctTc1010B.1.258.170.00104
ORF3a60S60FtCctTc1010C.370.001161
ORF3a60S60FtCctTc99B.1.6210.000797
ORF3a60S60FtCctTc77AY.1190.000247
ORF3a60S60FtCctTc77AY.620.00305
ORF3a60S60FtCctTc77B.1.2430.000487
ORF3a60S60FtCctTc77B.1.4270.000353
ORF3a60S60FtCctTc77B.1.4970.002203
ORF3a60S60FtCctTc66AY.1020.000159
ORF3a60S60FtCctTc66AY.1180.000376
ORF3a60S60FtCctTc66AY.4.20.00013
ORF3a60S60FtCctTc66B.1.619.10.003849
ORF3a60S60FtCctTc55AY.230.000349
ORF3a60S60FtCctTc55AY.9.20.000184
ORF3a60S60FtCctTc55AY.980.000395
ORF3a60S60FtCctTc55AY.99.20.000461
ORF3a60S60FtCctTc55B.1.1.330.002104
ORF3a60S60FtCctTc55B.1.177.560.003338
ORF3a60S60FtCctTc55B.1.5600.023148
ORF3a60S60FtCctTc44AY.4.50.00043
ORF3a60S60FtCctTc44AY.46.60.000289
ORF3a60S60FtCctTc44AY.98.10.000194
ORF3a60S60FtCctTc44B0.000511
ORF3a60S60FtCctTc44B.1.1.2160.003562
ORF3a60S60FtCctTc44B.1.1.3060.001754
ORF3a60S60FtCctTc44B.1.5230.009804
ORF3a60S60FtCctTc44P.20.000747
ORF3a60S60FtCctTc44Q.30.00058
ORF3a60S60FtCctTc330.166667
ORF3a60S60FtCctTc33A0.001161
ORF3a60S60FtCctTc33AY.380.001498
ORF3a60S60FtCctTc33AY.50.000062
ORF3a60S60FtCctTc33B.1.1.1870.026549
ORF3a60S60FtCctTc33B.1.177.440.001557
ORF3a60S60FtCctTc33B.1.2210.000213
ORF3a60S60FtCctTc33B.1.351.30.002629
ORF3a60S60FtCctTc33B.1.36.10.003421
ORF3a60S60FtCctTc33B.1.5750.00091
ORF3a60S60FtCctTc33B.1.5820.001472
ORF3a60S60FtCctTc22AY.1090.001479
ORF3a60S60FtCctTc22AY.1130.000285
ORF3a60S60FtCctTc22AY.1170.000169
ORF3a60S60FtCctTc22AY.120.10.000642
ORF3a60S60FtCctTc22AY.360.000296
ORF3a60S60FtCctTc22AY.4.2.10.000298
ORF3a60S60FtCctTc22AY.420.00008
ORF3a60S60FtCctTc22AY.550.001835
ORF3a60S60FtCctTc22AY.70.000392
ORF3a60S60FtCctTc22AY.7.10.000225
ORF3a60S60FtCctTc22AY.75.10.000361
ORF3a60S60FtCctTc22AY.960.004149
ORF3a60S60FtCctTc22B.1.1.2200.003717
ORF3a60S60FtCctTc22B.1.1.3170.000823
ORF3a60S60FtCctTc22B.1.177.550.004662
ORF3a60S60FtCctTc22B.1.2180.010309
ORF3a60S60FtCctTc22B.1.360.000292
ORF3a60S60FtCctTc22B.1.36.240.012346
ORF3a60S60FtCctTc22B.1.416.10.003125
ORF3a60S60FtCctTc22B.1.5960.000174
ORF3a60S60FtCctTc22B.1.6230.001073
ORF3a60S60FtCctTc22D.20.00015
ORF3a60S60FtCctTc22N.90.011905
ORF3a60S60FtCctTc22P.1.170.000324
ORF3a60S60FtCctTc11A.90.045455
ORF3a60S60FtCctTc11AU.20.002421
ORF3a60S60FtCctTc11AY.1110.000183
ORF3a60S60FtCctTc11AY.160.00038
ORF3a60S60FtCctTc11AY.16.10.00047
ORF3a60S60FtCctTc11AY.20.000356
ORF3a60S60FtCctTc11AY.270.000065
ORF3a60S60FtCctTc11AY.280.00189
ORF3a60S60FtCctTc11AY.320.000532
ORF3a60S60FtCctTc11AY.46.40.000165
ORF3a60S60FtCctTc11AY.540.000095
ORF3a60S60FtCctTc11AY.570.000656
ORF3a60S60FtCctTc11AY.590.00053
ORF3a60S60FtCctTc11AY.60.000041
ORF3a60S60FtCctTc11AY.650.000533
ORF3a60S60FtCctTc11AY.670.000464
ORF3a60S60FtCctTc11AY.710.000475
ORF3a60S60FtCctTc11AY.750.000056
ORF3a60S60FtCctTc11AY.790.001211
ORF3a60S60FtCctTc11AY.80.000606
ORF3a60S60FtCctTc11AY.830.001724
ORF3a60S60FtCctTc11AY.840.000437
ORF3a60S60FtCctTc11AY.9.10.000084
ORF3a60S60FtCctTc11B.1.1.10.000327
ORF3a60S60FtCctTc11B.1.1.1410.002012
ORF3a60S60FtCctTc11B.1.1.1890.001513
ORF3a60S60FtCctTc11B.1.1.2070.001182
ORF3a60S60FtCctTc11B.1.1.2140.000055
ORF3a60S60FtCctTc11B.1.1.2220.000204
ORF3a60S60FtCctTc11B.1.1.250.000569
ORF3a60S60FtCctTc11B.1.1.2540.011236
ORF3a60S60FtCctTc11B.1.1.270.00565
ORF3a60S60FtCctTc11B.1.1.2720.005208
ORF3a60S60FtCctTc11B.1.1.2790.001121
ORF3a60S60FtCctTc11B.1.1.2840.000107
ORF3a60S60FtCctTc11B.1.1.290.010309
ORF3a60S60FtCctTc11B.1.1.3290.003846
ORF3a60S60FtCctTc11B.1.1.3980.003226
ORF3a60S60FtCctTc11B.1.1.4090.002833
ORF3a60S60FtCctTc11B.1.1.4220.045455
ORF3a60S60FtCctTc11B.1.1280.000635
ORF3a60S60FtCctTc11B.1.177.350.000691
ORF3a60S60FtCctTc11B.1.177.730.000566
ORF3a60S60FtCctTc11B.1.177.80.000752
ORF3a60S60FtCctTc11B.1.177.800.001912
ORF3a60S60FtCctTc11B.1.177.810.000189
ORF3a60S60FtCctTc11B.1.214.30.007143
ORF3a60S60FtCctTc11B.1.2370.004975
ORF3a60S60FtCctTc11B.1.2400.000216
ORF3a60S60FtCctTc11B.1.2410.000812
ORF3a60S60FtCctTc11B.1.2470.014925
ORF3a60S60FtCctTc11B.1.2650.001271
ORF3a60S60FtCctTc11B.1.36.200.016949
ORF3a60S60FtCctTc11B.1.3690.000285
ORF3a60S60FtCctTc11B.1.3750.00082
ORF3a60S60FtCctTc11B.1.4040.001302
ORF3a60S60FtCctTc11B.1.4650.003802
ORF3a60S60FtCctTc11B.1.4990.00105
ORF3a60S60FtCctTc11B.1.5170.000427
ORF3a60S60FtCctTc11B.1.5260.000024
ORF3a60S60FtCctTc11B.1.5610.000397
ORF3a60S60FtCctTc11B.1.5680.001111
ORF3a60S60FtCctTc11B.1.621.10.000506
ORF3a60S60FtCctTc11B.6.30.026316
ORF3a60S60FtCctTc11C.10.002392
ORF3a60S60FtCctTc11C.260.007353
ORF3a60S60FtCctTc11C.36.30.000567
ORF3a60S60FtCctTc11C.80.004464
ORF3a60S60FtCctTc11N.50.001767
ORF3a60S60FtCctTc11P.1.120.000484
ORF3a60S60FtCctTc11P.1.130.000898
ORF3a60S60FtCctTc11P.1.150.000232
ORF3a60S60FtCctTc11P.40.003802
ORF3a60S60FtCctTc11Q.10.000126