CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 60 & Codon = Gcc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a60S60AnonsynTccGcc49470.95918425570-25572

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a60S60ATccGcc4749All0.000009
ORF3a60S60ATccGcc2323AY.40.000036
ORF3a60S60ATccGcc240.111111
ORF3a60S60ATccGcc44B.1.1.70.000004
ORF3a60S60ATccGcc33AY.390.000074
ORF3a60S60ATccGcc22AY.440.000012
ORF3a60S60ATccGcc22B.1.20.000018
ORF3a60S60ATccGcc22B.1.617.20.000008
ORF3a60S60ATccGcc11A.190.009434
ORF3a60S60ATccGcc11AY.1020.000027
ORF3a60S60ATccGcc11AY.280.00189
ORF3a60S60ATccGcc11AY.30.00001
ORF3a60S60ATccGcc11AY.4.20.000022
ORF3a60S60ATccGcc11AY.430.000004
ORF3a60S60ATccGcc11B.1.1770.000013
ORF3a60S60ATccGcc11B.1.2340.000132
ORF3a60S60ATccGcc11B.1.5510.00129