CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF3a | 57 | Q57H | nonsyn | caG | caT | 515896 | 514139 | 0.996594 | 25561-25563 | |
ORF3a | 57 | Q57H | nonsyn | caG | caC | 515896 | 1757 | 0.00340573 | 25561-25563 | |
ORF3a | 57 | Q57R | nonsyn | cAg | cGg | 2749 | 2592 | 0.942888 | 25561-25563 | |
ORF3a | 57 | Q57R | nonsyn | cAG | cGT | 2749 | 156 | 0.0567479 | 25561-25563 | |
ORF3a | 57 | Q57R | nonsyn | CAg | AGg | 2749 | 1 | 0.000363769 | 25561-25563 | |
ORF3a | 57 | Q57L | nonsyn | cAG | cTA | 601 | 419 | 0.697171 | 25561-25563 | |
ORF3a | 57 | Q57L | nonsyn | cAg | cTg | 601 | 112 | 0.186356 | 25561-25563 | |
ORF3a | 57 | Q57L | nonsyn | cAG | cTT | 601 | 67 | 0.111481 | 25561-25563 | |
ORF3a | 57 | Q57L | nonsyn | CAg | TTg | 601 | 3 | 0.00499168 | 25561-25563 | |
ORF3a | 57 | Q57Y | nonsyn | CaG | TaT | 401 | 390 | 0.972569 | 25561-25563 | |
ORF3a | 57 | Q57Y | nonsyn | CaG | TaC | 401 | 11 | 0.0274314 | 25561-25563 | |
ORF3a | 57 | Q57Q | syn | caG | caA | 256 | 256 | 1 | 25561-25563 | |
ORF3a | 57 | Q57E | nonsyn | Cag | Gag | 81 | 81 | 1 | 25561-25563 | |
ORF3a | 57 | Q57K | nonsyn | Cag | Aag | 77 | 53 | 0.688312 | 25561-25563 | |
ORF3a | 57 | Q57K | nonsyn | CaG | AaA | 77 | 24 | 0.311688 | 25561-25563 | |
ORF3a | 57 | Q57X | nonsyn | Cag | Tag | 58 | 57 | 0.982759 | 25561-25563 | |
ORF3a | 57 | Q57X | nonsyn | CAG | TGA | 58 | 1 | 0.0172414 | 25561-25563 | |
ORF3a | 57 | Q57N | nonsyn | CaG | AaT | 54 | 54 | 1 | 25561-25563 | |
ORF3a | 57 | Q57del | del | CAG | --- | 46 | 46 | 1 | 25561-25563 | |
ORF3a | 57 | Q57del1 | del | caG | ca- | 16 | 13 | 0.8125 | 25561-25563 | |
ORF3a | 57 | Q57del1 | del | Cag | -ag | 16 | 3 | 0.1875 | 25561-25563 | |
ORF3a | 57 | Q57D | nonsyn | CaG | GaT | 5 | 5 | 1 | 25561-25563 | |
ORF3a | 57 | Q57W | nonsyn | CAg | TGg | 4 | 4 | 1 | 25561-25563 | |
ORF3a | 57 | Q57P | nonsyn | cAg | cCg | 3 | 2 | 0.666667 | 25561-25563 | |
ORF3a | 57 | Q57P | nonsyn | cAG | cCT | 3 | 1 | 0.333333 | 25561-25563 | |
ORF3a | 57 | Q57del2 | del | CAG | --N | 1 | 1 | 1 | 25561-25563 | |
ORF3a | 57 | Q57G | nonsyn | CAG | GGA | 1 | 1 | 1 | 25561-25563 | |
ORF3a | 57 | Q57S | nonsyn | CAg | TCg | 1 | 1 | 1 | 25561-25563 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF3a | 57 | Q57H | caG | caT | 514139 | 515896 | All | 0.098335 |
ORF3a | 57 | Q57H | caG | caC | 1757 | 515896 | All | 0.000336 |
ORF3a | 57 | Q57H | caG | caT | 112569 | 112571 | B.1.2 | 0.991212 |
ORF3a | 57 | Q57H | caG | caC | 2 | 112571 | B.1.2 | 0.000018 |
ORF3a | 57 | Q57H | caG | caT | 53184 | 53227 | B.1 | 0.48714 |
ORF3a | 57 | Q57H | caG | caC | 43 | 53227 | B.1 | 0.000394 |
ORF3a | 57 | Q57H | caG | caT | 42340 | 42340 | B.1.526 | 0.995182 |
ORF3a | 57 | Q57H | caG | caT | 42308 | 42312 | B.1.429 | 0.995459 |
ORF3a | 57 | Q57H | caG | caC | 4 | 42312 | B.1.429 | 0.000094 |
ORF3a | 57 | Q57H | caG | caT | 32706 | 32707 | B.1.351 | 0.972235 |
ORF3a | 57 | Q57H | caG | caC | 1 | 32707 | B.1.351 | 0.00003 |
ORF3a | 57 | Q57H | caG | caT | 30130 | 30132 | B.1.160 | 0.939683 |
ORF3a | 57 | Q57H | caG | caC | 2 | 30132 | B.1.160 | 0.000062 |
ORF3a | 57 | Q57H | caG | caT | 19676 | 19676 | B.1.427 | 0.993587 |
ORF3a | 57 | Q57H | caG | caT | 13618 | 13618 | B.1.637 | 0.995104 |
ORF3a | 57 | Q57H | caG | caT | 11245 | 11248 | B.1.621 | 0.995397 |
ORF3a | 57 | Q57H | caG | caC | 3 | 11248 | B.1.621 | 0.000266 |
ORF3a | 57 | Q57H | caG | caT | 10707 | 10710 | B.1.596 | 0.932991 |
ORF3a | 57 | Q57H | caG | caC | 3 | 10710 | B.1.596 | 0.000261 |
ORF3a | 57 | Q57H | caG | caT | 9232 | 9232 | B.1.438.1 | 0.990239 |
ORF3a | 57 | Q57H | caG | caT | 6776 | 6777 | B.1.36 | 0.98862 |
ORF3a | 57 | Q57H | caG | caC | 1 | 6777 | B.1.36 | 0.000146 |
ORF3a | 57 | Q57H | caG | caT | 3777 | 3777 | B.1.595 | 0.985647 |
ORF3a | 57 | Q57H | caG | caT | 3574 | 3574 | B.1.311 | 0.981329 |
ORF3a | 57 | Q57H | caG | caT | 3460 | 3460 | B.1.369 | 0.98688 |
ORF3a | 57 | Q57H | caG | caT | 3298 | 3298 | B.1.351.2 | 0.997882 |
ORF3a | 57 | Q57H | caG | caT | 3265 | 3265 | B.1.575 | 0.990595 |
ORF3a | 57 | Q57H | caG | caT | 3168 | 3170 | B.1.497 | 0.997167 |
ORF3a | 57 | Q57H | caG | caC | 2 | 3170 | B.1.497 | 0.00063 |
ORF3a | 57 | Q57R | cAg | cGg | 2592 | 2749 | All | 0.000496 |
ORF3a | 57 | Q57R | cAG | cGT | 156 | 2749 | All | 0.00003 |
ORF3a | 57 | Q57R | CAg | AGg | 1 | 2749 | All | 0 |
ORF3a | 57 | Q57H | caG | caT | 2538 | 2538 | B.1.466.2 | 0.992958 |
ORF3a | 57 | Q57H | caG | caT | 2379 | 2379 | B.1.36.18 | 0.99958 |
ORF3a | 57 | Q57H | caG | caT | 2320 | 2320 | B.1.564 | 0.988075 |
ORF3a | 57 | Q57H | caG | caT | 2319 | 2319 | B.1.517 | 0.990179 |
ORF3a | 57 | Q57H | caG | caT | 2015 | 2015 | B.1.36.17 | 0.995553 |
ORF3a | 57 | Q57H | caG | caT | 1991 | 1993 | B.1.582 | 0.976938 |
ORF3a | 57 | Q57H | caG | caC | 2 | 1993 | B.1.582 | 0.000981 |
ORF3a | 57 | Q57H | caG | caT | 1969 | 1972 | B.1.621.1 | 0.995953 |
ORF3a | 57 | Q57H | caG | caC | 3 | 1972 | B.1.621.1 | 0.001517 |
ORF3a | 57 | Q57H | caG | caT | 1941 | 1941 | B.1.279 | 0.996918 |
ORF3a | 57 | Q57H | caG | caT | 1910 | 1910 | B.1.36.29 | 0.988101 |
ORF3a | 57 | Q57H | caG | caT | 1795 | 1796 | B.1.623 | 0.962983 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1796 | B.1.623 | 0.000536 |
ORF3a | 57 | Q57H | caG | caT | 1661 | 1661 | B.1.36.36 | 1 |
ORF3a | 57 | Q57H | caG | caT | 1639 | 1639 | B.1.329 | 0.995747 |
ORF3a | 57 | Q57H | caG | caT | 1629 | 1629 | B.1.351.5 | 0.976619 |
ORF3a | 57 | Q57H | caG | caC | 755 | 1493 | B.1.1.7 | 0.000676 |
ORF3a | 57 | Q57H | caG | caT | 738 | 1493 | B.1.1.7 | 0.000661 |
ORF3a | 57 | Q57H | caG | caT | 1440 | 1440 | B.1.577 | 0.989691 |
ORF3a | 57 | Q57H | caG | caT | 1387 | 1387 | B.1.110.3 | 0.996408 |
ORF3a | 57 | Q57H | caG | caT | 1361 | 1361 | B.1.349 | 0.972838 |
ORF3a | 57 | Q57H | caG | caT | 1307 | 1307 | B.1.36.27 | 0.99771 |
ORF3a | 57 | Q57H | caG | caT | 1232 | 1232 | B.1.367 | 0.976228 |
ORF3a | 57 | Q57H | caG | caT | 1231 | 1231 | B.1.422 | 1 |
ORF3a | 57 | Q57H | caG | caT | 1139 | 1139 | B.1.509 | 0.986147 |
ORF3a | 57 | Q57H | caG | caT | 1131 | 1131 | B.1.351.3 | 0.991236 |
ORF3a | 57 | Q57H | caG | caT | 1083 | 1118 | P.1 | 0.017062 |
ORF3a | 57 | Q57H | caG | caC | 35 | 1118 | P.1 | 0.000551 |
ORF3a | 57 | Q57H | caG | caT | 1095 | 1095 | B.1.588 | 0.99636 |
ORF3a | 57 | Q57H | caG | caT | 1055 | 1055 | B.1.160.16 | 0.980483 |
ORF3a | 57 | Q57H | caG | caT | 979 | 1011 | AY.4 | 0.001524 |
ORF3a | 57 | Q57H | caG | caC | 32 | 1011 | AY.4 | 0.00005 |
ORF3a | 57 | Q57H | caG | caT | 998 | 998 | B.1.36.8 | 0.998 |
ORF3a | 57 | Q57H | caG | caT | 995 | 995 | B.1.375 | 0.815574 |
ORF3a | 57 | Q57H | caG | caT | 995 | 995 | B.1.389 | 0.996994 |
ORF3a | 57 | Q57H | caG | caT | 987 | 987 | B.1.426 | 0.995964 |
ORF3a | 57 | Q57H | caG | caT | 979 | 979 | B.1.428 | 0.99898 |
ORF3a | 57 | Q57H | caG | caT | 970 | 970 | B.1.436 | 0.997942 |
ORF3a | 57 | Q57R | cAg | cGg | 950 | 950 | AY.51 | 0.863636 |
ORF3a | 57 | Q57H | caG | caT | 950 | 950 | B.1.499 | 0.997899 |
ORF3a | 57 | Q57H | caG | caT | 890 | 890 | B.1.568 | 0.988889 |
ORF3a | 57 | Q57H | caG | caT | 889 | 889 | B.1.371 | 0.997755 |
ORF3a | 57 | Q57H | caG | caT | 872 | 872 | B.1.576 | 0.790571 |
ORF3a | 57 | Q57H | caG | caT | 856 | 856 | B.1.36.1 | 0.976055 |
ORF3a | 57 | Q57R | cAg | cGg | 844 | 846 | B.1.617.2 | 0.003178 |
ORF3a | 57 | Q57R | cAG | cGT | 2 | 846 | B.1.617.2 | 0.000008 |
ORF3a | 57 | Q57H | caG | caT | 840 | 840 | B.1.111 | 0.987074 |
ORF3a | 57 | Q57H | caG | caT | 821 | 821 | B.1.36.22 | 0.991546 |
ORF3a | 57 | Q57H | caG | caT | 765 | 804 | B.1.1 | 0.013878 |
ORF3a | 57 | Q57H | caG | caC | 39 | 804 | B.1.1 | 0.000707 |
ORF3a | 57 | Q57H | caG | caT | 798 | 798 | B.1.320 | 0.993773 |
ORF3a | 57 | Q57H | caG | caT | 790 | 790 | AU.1 | 1 |
ORF3a | 57 | Q57H | caG | caT | 773 | 773 | B.1.160.8 | 0.996134 |
ORF3a | 57 | Q57H | caG | caT | 772 | 773 | B.1.265 | 0.98094 |
ORF3a | 57 | Q57H | caG | caC | 1 | 773 | B.1.265 | 0.001271 |
ORF3a | 57 | Q57H | caG | caT | 770 | 770 | B.1.361 | 0.992268 |
ORF3a | 57 | Q57H | caG | caT | 757 | 757 | B.1.346 | 0.992136 |
ORF3a | 57 | Q57H | caG | caT | 754 | 754 | B.1.22 | 0.993412 |
ORF3a | 57 | Q57H | caG | caT | 700 | 749 | AY.43 | 0.003101 |
ORF3a | 57 | Q57H | caG | caC | 49 | 749 | AY.43 | 0.000217 |
ORF3a | 57 | Q57H | caG | caT | 706 | 706 | B.1.470 | 0.991573 |
ORF3a | 57 | Q57H | caG | caT | 702 | 702 | B.1.36.16 | 1 |
ORF3a | 57 | Q57H | caG | caT | 634 | 634 | B.1.362 | 0.976888 |
ORF3a | 57 | Q57H | caG | caT | 633 | 633 | B.1.564.1 | 0.998423 |
ORF3a | 57 | Q57H | caG | caT | 609 | 609 | B.1.36.38 | 1 |
ORF3a | 57 | Q57H | caG | caT | 604 | 604 | B.1.324 | 0.969502 |
ORF3a | 57 | Q57L | cAG | cTA | 419 | 601 | All | 0.00008 |
ORF3a | 57 | Q57L | cAg | cTg | 112 | 601 | All | 0.000021 |
ORF3a | 57 | Q57L | cAG | cTT | 67 | 601 | All | 0.000013 |
ORF3a | 57 | Q57L | CAg | TTg | 3 | 601 | All | 0.000001 |
ORF3a | 57 | Q57H | caG | caT | 587 | 587 | B.1.160.17 | 0.998299 |
ORF3a | 57 | Q57H | caG | caT | 575 | 575 | B.1.356 | 0.993092 |
ORF3a | 57 | Q57H | caG | caT | 571 | 571 | B.1.36.31 | 1 |
ORF3a | 57 | Q57H | caG | caT | 523 | 523 | B.1.587 | 0.99241 |
ORF3a | 57 | Q57H | caG | caT | 520 | 520 | B.1.474 | 0.988593 |
ORF3a | 57 | Q57H | caG | caT | 506 | 506 | B.1.516 | 0.990215 |
ORF3a | 57 | Q57H | caG | caT | 479 | 479 | B.1.160.7 | 0.995842 |
ORF3a | 57 | Q57H | caG | caT | 469 | 469 | B.1.160.14 | 0.993644 |
ORF3a | 57 | Q57H | caG | caT | 465 | 465 | AU.3 | 0.981013 |
ORF3a | 57 | Q57H | caG | caT | 463 | 463 | B.1.36.21 | 1 |
ORF3a | 57 | Q57H | caG | caT | 462 | 462 | B.1.305 | 0.993548 |
ORF3a | 57 | Q57H | caG | caT | 461 | 461 | B.1.574 | 0.991398 |
ORF3a | 57 | Q57H | caG | caT | 452 | 452 | B.1.36.25 | 0.997792 |
ORF3a | 57 | Q57H | caG | caT | 445 | 445 | B.1.36.39 | 0.986696 |
ORF3a | 57 | Q57H | caG | caT | 420 | 420 | B.1.13 | 0.997625 |
ORF3a | 57 | Q57H | caG | caT | 418 | 418 | B.1.625 | 0.983529 |
ORF3a | 57 | Q57H | caG | caT | 411 | 411 | AU.2 | 0.995157 |
ORF3a | 57 | Q57H | caG | caT | 408 | 408 | B.1.160.26 | 0.987893 |
ORF3a | 57 | Q57H | caG | caT | 408 | 408 | B.1.575.1 | 0.995122 |
ORF3a | 57 | Q57H | caG | caT | 404 | 404 | B.1.523 | 0.990196 |
ORF3a | 57 | Q57Y | CaG | TaT | 390 | 401 | All | 0.000075 |
ORF3a | 57 | Q57Y | CaG | TaC | 11 | 401 | All | 0.000002 |
ORF3a | 57 | Q57H | caG | caT | 399 | 399 | B.1.298 | 0.843552 |
ORF3a | 57 | Q57H | caG | caT | 398 | 398 | B.1.480 | 0.99005 |
ORF3a | 57 | Q57H | caG | caT | 394 | 394 | B.1.503 | 0.9801 |
ORF3a | 57 | Q57H | caG | caT | 388 | 388 | B.1.336 | 0.946341 |
ORF3a | 57 | Q57H | caG | caT | 384 | 384 | B.1.36.35 | 1 |
ORF3a | 57 | Q57H | caG | caT | 379 | 379 | B.1.3 | 0.992147 |
ORF3a | 57 | Q57H | caG | caT | 378 | 378 | B.1.448 | 0.992126 |
ORF3a | 57 | Q57H | caG | caT | 375 | 375 | B.1.289 | 0.99734 |
ORF3a | 57 | Q57H | caG | caT | 375 | 375 | B.1.612 | 0.994695 |
ORF3a | 57 | Q57H | caG | caT | 364 | 364 | B.1.471 | 0.994536 |
ORF3a | 57 | Q57H | caG | caT | 360 | 360 | B.1.36.37 | 1 |
ORF3a | 57 | Q57H | caG | caT | 350 | 350 | B.1.36.26 | 1 |
ORF3a | 57 | Q57H | caG | caT | 340 | 340 | B.1.570 | 1 |
ORF3a | 57 | Q57H | caG | caT | 339 | 339 | B.1.160.28 | 0.991228 |
ORF3a | 57 | Q57H | caG | caT | 338 | 338 | B.1.350 | 0.991202 |
ORF3a | 57 | Q57H | caG | caT | 332 | 332 | B.1.425 | 0.994012 |
ORF3a | 57 | Q57H | caG | caT | 310 | 323 | AY.44 | 0.001887 |
ORF3a | 57 | Q57H | caG | caC | 13 | 323 | AY.44 | 0.000079 |
ORF3a | 57 | Q57H | caG | caT | 322 | 322 | B.1.319 | 0.981707 |
ORF3a | 57 | Q57H | caG | caT | 310 | 310 | B.1.36.9 | 0.996785 |
ORF3a | 57 | Q57H | caG | caT | 306 | 306 | B.1.453 | 0.990291 |
ORF3a | 57 | Q57H | caG | caT | 306 | 306 | B.1.456 | 1 |
ORF3a | 57 | Q57H | caG | caT | 300 | 301 | B.1.433 | 0.958466 |
ORF3a | 57 | Q57H | caG | caC | 1 | 301 | B.1.433 | 0.003195 |
ORF3a | 57 | Q57H | caG | caT | 292 | 292 | B.1.567 | 0.973333 |
ORF3a | 57 | Q57H | caG | caT | 279 | 279 | B.1.332 | 0.975524 |
ORF3a | 57 | Q57H | caG | caT | 274 | 274 | B.1.469 | 0.98917 |
ORF3a | 57 | Q57H | caG | caT | 224 | 266 | B.1.617.2 | 0.000843 |
ORF3a | 57 | Q57H | caG | caC | 42 | 266 | B.1.617.2 | 0.000158 |
ORF3a | 57 | Q57H | caG | caT | 265 | 265 | B.1.599 | 0.967153 |
ORF3a | 57 | Q57H | caG | caT | 263 | 263 | B.1.465 | 1 |
ORF3a | 57 | Q57Q | caG | caA | 256 | 256 | All | 0.000049 |
ORF3a | 57 | Q57H | caG | caT | 253 | 253 | B.1.39 | 0.988281 |
ORF3a | 57 | Q57H | caG | caT | 250 | 250 | B.1.36.7 | 1 |
ORF3a | 57 | Q57H | caG | caT | 238 | 238 | B.1.580 | 0.96748 |
ORF3a | 57 | Q57H | caG | caT | 237 | 237 | B.1.160.29 | 1 |
ORF3a | 57 | Q57H | caG | caT | 233 | 233 | B.1.459 | 0.95102 |
ORF3a | 57 | Q57H | caG | caT | 232 | 232 | B.1.413 | 0.987234 |
ORF3a | 57 | Q57H | caG | caT | 231 | 231 | B.1.340 | 0.991416 |
ORF3a | 57 | Q57H | caG | caT | 226 | 226 | B.1.160.24 | 1 |
ORF3a | 57 | Q57H | caG | caT | 225 | 225 | B.1.541 | 0.995575 |
ORF3a | 57 | Q57H | caG | caT | 224 | 224 | B.1.505 | 0.982456 |
ORF3a | 57 | Q57H | caG | caT | 220 | 220 | B.1.110 | 0.995475 |
ORF3a | 57 | Q57R | cAg | cGg | 214 | 215 | AY.4 | 0.000333 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 215 | AY.4 | 0.000002 |
ORF3a | 57 | Q57H | caG | caT | 213 | 213 | B.1.597 | 0.986111 |
ORF3a | 57 | Q57H | caG | caT | 212 | 212 | B.1.362.2 | 1 |
ORF3a | 57 | Q57H | caG | caT | 211 | 211 | B.1.590 | 0.959091 |
ORF3a | 57 | Q57H | caG | caT | 210 | 210 | B.1.443 | 0.981308 |
ORF3a | 57 | Q57H | caG | caT | 208 | 208 | B.1.575.2 | 1 |
ORF3a | 57 | Q57H | caG | caT | 207 | 207 | B.1.160.23 | 1 |
ORF3a | 57 | Q57H | caG | caT | 203 | 203 | B.1.160.30 | 0.604167 |
ORF3a | 57 | Q57H | caG | caT | 202 | 202 | B.1.160.15 | 1 |
ORF3a | 57 | Q57H | caG | caT | 200 | 200 | B.1.366 | 0.97561 |
ORF3a | 57 | Q57H | caG | caT | 199 | 199 | B.1.160.33 | 0.880531 |
ORF3a | 57 | Q57H | caG | caT | 199 | 199 | B.1.162 | 1 |
ORF3a | 57 | Q57H | caG | caT | 197 | 197 | B.1.521 | 0.9801 |
ORF3a | 57 | Q57H | caG | caT | 196 | 196 | B.1.160.32 | 0.841202 |
ORF3a | 57 | Q57R | cAG | cGT | 110 | 191 | AY.19 | 0.125428 |
ORF3a | 57 | Q57R | cAg | cGg | 81 | 191 | AY.19 | 0.09236 |
ORF3a | 57 | Q57H | caG | caT | 191 | 191 | B.1.112 | 0.989637 |
ORF3a | 57 | Q57H | caG | caT | 190 | 190 | B.1.517.1 | 1 |
ORF3a | 57 | Q57H | caG | caC | 179 | 182 | AY.42 | 0.007201 |
ORF3a | 57 | Q57H | caG | caT | 3 | 182 | AY.42 | 0.000121 |
ORF3a | 57 | Q57H | caG | caT | 182 | 182 | B.1.177.73 | 0.103058 |
ORF3a | 57 | Q57H | caG | caT | 181 | 181 | B.1.36.10 | 0.866029 |
ORF3a | 57 | Q57H | caG | caT | 181 | 181 | B.1.630 | 0.947644 |
ORF3a | 57 | Q57H | caG | caT | 180 | 180 | B.1.260 | 0.602007 |
ORF3a | 57 | Q57H | caG | caT | 178 | 178 | B.1.270 | 1 |
ORF3a | 57 | Q57H | caG | caT | 177 | 177 | B.1.411 | 0.655556 |
ORF3a | 57 | Q57H | caG | caT | 176 | 176 | A | 0.068111 |
ORF3a | 57 | Q57H | caG | caT | 175 | 175 | B.1.160.11 | 1 |
ORF3a | 57 | Q57H | caG | caT | 175 | 175 | B.1.337 | 0.977654 |
ORF3a | 57 | Q57H | caG | caT | 174 | 174 | B.1.9.5 | 0.988636 |
ORF3a | 57 | Q57H | caG | caT | 173 | 173 | B.1.306 | 0.988571 |
ORF3a | 57 | Q57H | caG | caT | 173 | 173 | B.1.36.28 | 0.994253 |
ORF3a | 57 | Q57H | caG | caT | 173 | 173 | B.1.626 | 0.988571 |
ORF3a | 57 | Q57H | caG | caT | 172 | 172 | B.1.108 | 1 |
ORF3a | 57 | Q57H | caG | caT | 171 | 171 | B.1.468 | 0.977143 |
ORF3a | 57 | Q57H | caG | caT | 170 | 170 | B.1.595.1 | 0.994152 |
ORF3a | 57 | Q57H | caG | caT | 169 | 169 | B.1.439 | 1 |
ORF3a | 57 | Q57H | caG | caT | 167 | 167 | B.1.301 | 0.988166 |
ORF3a | 57 | Q57H | caG | caT | 167 | 167 | B.1.605 | 0.994048 |
ORF3a | 57 | Q57H | caG | caT | 164 | 164 | B.1.315 | 0.993939 |
ORF3a | 57 | Q57H | caG | caT | 164 | 164 | B.1.606 | 0.987952 |
ORF3a | 57 | Q57H | caG | caT | 163 | 163 | B.1.573 | 0.993902 |
ORF3a | 57 | Q57H | caG | caT | 162 | 162 | B.1.36.24 | 1 |
ORF3a | 57 | Q57H | caG | caT | 162 | 162 | B.1.9 | 1 |
ORF3a | 57 | Q57H | caG | caT | 161 | 161 | B.1.9.4 | 0.98773 |
ORF3a | 57 | Q57H | caG | caT | 160 | 160 | B.1.544 | 0.963855 |
ORF3a | 57 | Q57H | caG | caT | 89 | 157 | AY.103 | 0.000553 |
ORF3a | 57 | Q57H | caG | caC | 68 | 157 | AY.103 | 0.000422 |
ORF3a | 57 | Q57H | caG | caT | 156 | 156 | B.1.160.12 | 1 |
ORF3a | 57 | Q57H | caG | caT | 152 | 152 | B.1.313 | 1 |
ORF3a | 57 | Q57H | caG | caT | 151 | 151 | B.1.438 | 0.986928 |
ORF3a | 57 | Q57H | caG | caT | 123 | 150 | B.1.177 | 0.00162 |
ORF3a | 57 | Q57H | caG | caC | 27 | 150 | B.1.177 | 0.000356 |
ORF3a | 57 | Q57H | caG | caT | 148 | 148 | B.1.160.22 | 1 |
ORF3a | 57 | Q57H | caG | caT | 148 | 148 | B.1.170 | 0.637931 |
ORF3a | 57 | Q57H | caG | caT | 144 | 144 | B.1.325 | 0.993103 |
ORF3a | 57 | Q57H | caG | caT | 140 | 140 | B.1.492 | 0.985915 |
ORF3a | 57 | Q57H | caG | caT | 139 | 139 | B.1.466.1 | 1 |
ORF3a | 57 | Q57L | cAG | cTA | 113 | 137 | AY.4 | 0.000176 |
ORF3a | 57 | Q57L | cAg | cTg | 24 | 137 | AY.4 | 0.000037 |
ORF3a | 57 | Q57H | caG | caT | 137 | 137 | B.1.160.18 | 1 |
ORF3a | 57 | Q57H | caG | caT | 137 | 137 | B.1.595.4 | 1 |
ORF3a | 57 | Q57H | caG | caT | 136 | 136 | B.1.160.9 | 0.978417 |
ORF3a | 57 | Q57H | caG | caT | 135 | 135 | B.1.501 | 0.992647 |
ORF3a | 57 | Q57H | caG | caT | 134 | 134 | B.1.280 | 0.957143 |
ORF3a | 57 | Q57H | caG | caT | 133 | 133 | B.1.314 | 1 |
ORF3a | 57 | Q57H | caG | caT | 132 | 132 | B.1.36.33 | 1 |
ORF3a | 57 | Q57H | caG | caT | 131 | 132 | B.1.632 | 0.879195 |
ORF3a | 57 | Q57H | caG | caC | 1 | 132 | B.1.632 | 0.006711 |
ORF3a | 57 | Q57H | caG | caT | 131 | 131 | B.1.589 | 0.992424 |
ORF3a | 57 | Q57H | caG | caT | 130 | 130 | B.1.120 | 1 |
ORF3a | 57 | Q57H | caG | caT | 127 | 127 | B.1.124 | 0.992188 |
ORF3a | 57 | Q57H | caG | caT | 125 | 125 | B.1.12 | 1 |
ORF3a | 57 | Q57H | caG | caT | 124 | 124 | B.1.167 | 0.96875 |
ORF3a | 57 | Q57H | caG | caT | 124 | 124 | B.1.370 | 0.992 |
ORF3a | 57 | Q57H | caG | caT | 124 | 124 | B.1.463 | 1 |
ORF3a | 57 | Q57H | caG | caT | 123 | 123 | B.1.160.31 | 0.991935 |
ORF3a | 57 | Q57H | caG | caT | 122 | 122 | B.1.344 | 1 |
ORF3a | 57 | Q57H | caG | caT | 121 | 121 | AB.1 | 0.991803 |
ORF3a | 57 | Q57H | caG | caT | 121 | 121 | B.1.160.10 | 0.975806 |
ORF3a | 57 | Q57H | caG | caT | 121 | 121 | B.1.424 | 0.975806 |
ORF3a | 57 | Q57H | caG | caT | 121 | 121 | B.1.451 | 0.991803 |
ORF3a | 57 | Q57H | caG | caT | 120 | 120 | B.1.44 | 1 |
ORF3a | 57 | Q57H | caG | caT | 118 | 118 | B.1.166 | 1 |
ORF3a | 57 | Q57H | caG | caT | 116 | 116 | B.1.118 | 0.778523 |
ORF3a | 57 | Q57H | caG | caT | 116 | 116 | B.1.338 | 1 |
ORF3a | 57 | Q57H | caG | caT | 98 | 114 | B.1.258 | 0.006522 |
ORF3a | 57 | Q57H | caG | caC | 16 | 114 | B.1.258 | 0.001065 |
ORF3a | 57 | Q57H | caG | caT | 113 | 113 | B.1.462 | 0.818841 |
ORF3a | 57 | Q57H | caG | caT | 110 | 110 | B.1.495 | 1 |
ORF3a | 57 | Q57Y | CaG | TaT | 107 | 107 | B.1.2 | 0.000942 |
ORF3a | 57 | Q57H | caG | caT | 107 | 107 | B.1.36.19 | 0.990741 |
ORF3a | 57 | Q57H | caG | caT | 106 | 106 | B.1.596.1 | 0.990654 |
ORF3a | 57 | Q57H | caG | caT | 105 | 105 | B | 0.01342 |
ORF3a | 57 | Q57H | caG | caT | 105 | 105 | B.1.357 | 1 |
ORF3a | 57 | Q57H | caG | caT | 104 | 104 | B.1.36.12 | 1 |
ORF3a | 57 | Q57H | caG | caT | 104 | 104 | B.1.533 | 1 |
ORF3a | 57 | Q57H | caG | caT | 104 | 104 | B.1.581 | 0.981132 |
ORF3a | 57 | Q57H | caG | caT | 103 | 103 | B.1.441 | 0.990385 |
ORF3a | 57 | Q57H | caG | caT | 102 | 102 | B.1.571 | 0.990291 |
ORF3a | 57 | Q57H | caG | caT | 97 | 97 | B.1.423 | 0.989796 |
ORF3a | 57 | Q57H | caG | caT | 96 | 96 | B.1.1.526 | 0.340426 |
ORF3a | 57 | Q57H | caG | caT | 96 | 96 | B.1.268 | 1 |
ORF3a | 57 | Q57H | caG | caT | 89 | 95 | B.1.243 | 0.006193 |
ORF3a | 57 | Q57H | caG | caC | 6 | 95 | B.1.243 | 0.000418 |
ORF3a | 57 | Q57H | caG | caT | 94 | 94 | B.1.119 | 0.989474 |
ORF3a | 57 | Q57H | caG | caT | 94 | 94 | B.1.385 | 1 |
ORF3a | 57 | Q57H | caG | caT | 94 | 94 | B.1.603 | 1 |
ORF3a | 57 | Q57H | caG | caT | 93 | 93 | B.1.591 | 0.989362 |
ORF3a | 57 | Q57H | caG | caT | 92 | 92 | B.1.36.2 | 0.989247 |
ORF3a | 57 | Q57H | caG | caT | 91 | 91 | B.1.333 | 0.957895 |
ORF3a | 57 | Q57H | caG | caT | 91 | 91 | B.1.372 | 1 |
ORF3a | 57 | Q57H | caG | caT | 90 | 90 | B.1.160.25 | 1 |
ORF3a | 57 | Q57H | caG | caT | 90 | 90 | B.1.586 | 0.989011 |
ORF3a | 57 | Q57H | caG | caT | 88 | 88 | B.1.335 | 0.907216 |
ORF3a | 57 | Q57H | caG | caT | 88 | 88 | B.1.435 | 1 |
ORF3a | 57 | Q57H | caG | caT | 88 | 88 | B.1.507 | 0.988764 |
ORF3a | 57 | Q57H | caG | caT | 88 | 88 | B.1.593 | 0.956522 |
ORF3a | 57 | Q57R | cAg | cGg | 87 | 87 | AY.17 | 0.713115 |
ORF3a | 57 | Q57H | caG | caT | 87 | 87 | B.1.579 | 0.977528 |
ORF3a | 57 | Q57H | caG | caT | 86 | 86 | B.1.355 | 0.955556 |
ORF3a | 57 | Q57L | cAG | cTA | 85 | 85 | AY.20 | 0.003304 |
ORF3a | 57 | Q57H | caG | caT | 85 | 85 | B.1.116 | 0.988372 |
ORF3a | 57 | Q57H | caG | caT | 84 | 84 | B.1.274 | 1 |
ORF3a | 57 | Q57H | caG | caT | 84 | 84 | B.1.478 | 0.988235 |
ORF3a | 57 | Q57H | caG | caT | 83 | 83 | B.1.429.1 | 1 |
ORF3a | 57 | Q57L | cAG | cTA | 82 | 82 | AY.3 | 0.000816 |
ORF3a | 57 | Q57H | caG | caT | 71 | 82 | B.1.221 | 0.005043 |
ORF3a | 57 | Q57H | caG | caC | 11 | 82 | B.1.221 | 0.000781 |
ORF3a | 57 | Q57H | caG | caT | 82 | 82 | B.1.518 | 0.964706 |
ORF3a | 57 | Q57E | Cag | Gag | 81 | 81 | All | 0.000015 |
ORF3a | 57 | Q57H | caG | caT | 81 | 81 | B.1.160.20 | 0.723214 |
ORF3a | 57 | Q57H | caG | caT | 81 | 81 | B.1.445 | 0.952941 |
ORF3a | 57 | Q57H | caG | caT | 80 | 80 | B.1.117 | 1 |
ORF3a | 57 | Q57H | caG | caT | 80 | 80 | B.1.159 | 0.97561 |
ORF3a | 57 | Q57H | caG | caT | 79 | 79 | B.1.1.507 | 0.686957 |
ORF3a | 57 | Q57H | caG | caT | 79 | 79 | B.1.360 | 1 |
ORF3a | 57 | Q57H | caG | caT | 79 | 79 | B.1.450 | 0.897727 |
ORF3a | 57 | Q57H | caG | caT | 78 | 78 | B.1.293 | 0.975 |
ORF3a | 57 | Q57H | caG | caT | 78 | 78 | B.1.432 | 0.876404 |
ORF3a | 57 | Q57K | Cag | Aag | 53 | 77 | All | 0.00001 |
ORF3a | 57 | Q57K | CaG | AaA | 24 | 77 | All | 0.000005 |
ORF3a | 57 | Q57H | caG | caT | 77 | 77 | B.1.273 | 1 |
ORF3a | 57 | Q57H | caG | caT | 77 | 77 | B.1.428.3 | 0.987179 |
ORF3a | 57 | Q57H | caG | caT | 76 | 76 | B.1.363 | 0.987013 |
ORF3a | 57 | Q57H | caG | caT | 75 | 75 | B.1.1.335 | 0.974026 |
ORF3a | 57 | Q57H | caG | caT | 75 | 75 | B.1.622 | 0.974026 |
ORF3a | 57 | Q57H | caG | caT | 74 | 74 | B.1.302 | 0.986667 |
ORF3a | 57 | Q57H | caG | caT | 74 | 74 | B.1.326 | 0.560606 |
ORF3a | 57 | Q57R | cAg | cGg | 73 | 73 | AY.16.1 | 0.034305 |
ORF3a | 57 | Q57L | cAG | cTA | 71 | 73 | AY.25 | 0.000427 |
ORF3a | 57 | Q57L | cAg | cTg | 2 | 73 | AY.25 | 0.000012 |
ORF3a | 57 | Q57H | caG | caT | 73 | 73 | B.1.264 | 0.901235 |
ORF3a | 57 | Q57H | caG | caT | 73 | 73 | B.1.452 | 1 |
ORF3a | 57 | Q57H | caG | caT | 72 | 72 | B.1.1.39 | 0.036697 |
ORF3a | 57 | Q57H | caG | caT | 72 | 72 | B.1.513 | 1 |
ORF3a | 57 | Q57H | caG | caT | 70 | 70 | B.1.165 | 0.833333 |
ORF3a | 57 | Q57H | caG | caT | 70 | 70 | B.1.284 | 0.921053 |
ORF3a | 57 | Q57H | caG | caT | 70 | 70 | B.1.629 | 0.933333 |
ORF3a | 57 | Q57H | caG | caT | 48 | 69 | AY.25 | 0.000289 |
ORF3a | 57 | Q57H | caG | caC | 21 | 69 | AY.25 | 0.000126 |
ORF3a | 57 | Q57H | caG | caT | 68 | 68 | B.1.37 | 1 |
ORF3a | 57 | Q57H | caG | caT | 68 | 68 | B.1.569 | 0.985507 |
ORF3a | 57 | Q57H | caG | caT | 67 | 67 | B.1.282 | 1 |
ORF3a | 57 | Q57Y | CaG | TaT | 67 | 67 | B.1.526 | 0.001575 |
ORF3a | 57 | Q57H | caG | caT | 64 | 66 | B.1.1.220 | 0.118959 |
ORF3a | 57 | Q57H | caG | caC | 2 | 66 | B.1.1.220 | 0.003717 |
ORF3a | 57 | Q57H | caG | caT | 66 | 66 | B.1.160.27 | 1 |
ORF3a | 57 | Q57H | caG | caT | 66 | 66 | B.1.164 | 0.985075 |
ORF3a | 57 | Q57H | caG | caT | 66 | 66 | B.1.515 | 0.956522 |
ORF3a | 57 | Q57H | caG | caT | 65 | 65 | B.1.1.165 | 1 |
ORF3a | 57 | Q57Q | caG | caA | 64 | 64 | B.1.1.7 | 0.000057 |
ORF3a | 57 | Q57H | caG | caT | 63 | 63 | B.1.444 | 1 |
ORF3a | 57 | Q57H | caG | caT | 63 | 63 | B.1.485 | 0.940299 |
ORF3a | 57 | Q57H | caG | caT | 61 | 61 | B.1.36.23 | 1 |
ORF3a | 57 | Q57H | caG | caT | 59 | 59 | B.1.598 | 1 |
ORF3a | 57 | Q57X | Cag | Tag | 57 | 58 | All | 0.000011 |
ORF3a | 57 | Q57X | CAG | TGA | 1 | 58 | All | 0 |
ORF3a | 57 | Q57H | caG | caT | 36 | 58 | AY.26 | 0.001019 |
ORF3a | 57 | Q57H | caG | caC | 22 | 58 | AY.26 | 0.000623 |
ORF3a | 57 | Q57H | caG | caT | 54 | 58 | B.1.1.519 | 0.002144 |
ORF3a | 57 | Q57H | caG | caC | 4 | 58 | B.1.1.519 | 0.000159 |
ORF3a | 57 | Q57H | caG | caT | 56 | 58 | B.1.234 | 0.007389 |
ORF3a | 57 | Q57H | caG | caC | 2 | 58 | B.1.234 | 0.000264 |
ORF3a | 57 | Q57H | caG | caT | 58 | 58 | B.1.36.20 | 0.983051 |
ORF3a | 57 | Q57H | caG | caT | 58 | 58 | B.1.563 | 0.983051 |
ORF3a | 57 | Q57H | caG | caT | 57 | 57 | B.1.161 | 0.982759 |
ORF3a | 57 | Q57H | caG | caT | 55 | 55 | B.1.334 | 1 |
ORF3a | 57 | Q57N | CaG | AaT | 54 | 54 | All | 0.00001 |
ORF3a | 57 | Q57H | caG | caT | 54 | 54 | B.1.348 | 0.981818 |
ORF3a | 57 | Q57H | caG | caT | 54 | 54 | B.1.460 | 0.964286 |
ORF3a | 57 | Q57H | caG | caT | 54 | 54 | B.1.562 | 1 |
ORF3a | 57 | Q57H | caG | caT | 44 | 53 | AY.23 | 0.003069 |
ORF3a | 57 | Q57H | caG | caC | 9 | 53 | AY.23 | 0.000628 |
ORF3a | 57 | Q57H | caG | caT | 53 | 53 | B.1.267 | 0.981481 |
ORF3a | 57 | Q57H | caG | caT | 53 | 53 | B.1.604 | 0.913793 |
ORF3a | 57 | Q57H | caG | caT | 52 | 52 | B.1.113 | 0.8125 |
ORF3a | 57 | Q57H | caG | caT | 52 | 52 | B.1.291 | 1 |
ORF3a | 57 | Q57Q | caG | caA | 52 | 52 | B.1.351 | 0.001546 |
ORF3a | 57 | Q57H | caG | caT | 52 | 52 | B.1.438.2 | 1 |
ORF3a | 57 | Q57H | caG | caT | 36 | 51 | AY.102 | 0.000955 |
ORF3a | 57 | Q57H | caG | caC | 15 | 51 | AY.102 | 0.000398 |
ORF3a | 57 | Q57H | caG | caT | 51 | 51 | B.1.487 | 1 |
ORF3a | 57 | Q57H | caG | caT | 51 | 51 | B.1.578 | 0.910714 |
ORF3a | 57 | Q57H | caG | caT | 50 | 50 | B.1.566 | 0.961538 |
ORF3a | 57 | Q57H | caG | caT | 49 | 49 | B.1.160.21 | 1 |
ORF3a | 57 | Q57H | caG | caT | 49 | 49 | B.1.498 | 1 |
ORF3a | 57 | Q57H | caG | caT | 48 | 48 | B.1.343 | 1 |
ORF3a | 57 | Q57H | caG | caT | 48 | 48 | B.1.446 | 0.96 |
ORF3a | 57 | Q57H | caG | caT | 47 | 47 | B.1.36.34 | 1 |
ORF3a | 57 | Q57del | CAG | --- | 46 | 46 | All | 0.000009 |
ORF3a | 57 | Q57H | caG | caT | 45 | 45 | B.1.40 | 0.882353 |
ORF3a | 57 | Q57H | caG | caT | 45 | 45 | B.1.437 | 0.9375 |
ORF3a | 57 | Q57H | caG | caT | 45 | 45 | B.1.473 | 0.865385 |
ORF3a | 57 | Q57H | caG | caT | 45 | 45 | B.1.520 | 0.978261 |
ORF3a | 57 | Q57H | caG | caT | 44 | 44 | B.1.206 | 0.035889 |
ORF3a | 57 | Q57H | caG | caT | 44 | 44 | B.1.276 | 0.745763 |
ORF3a | 57 | Q57L | cAG | cTT | 44 | 44 | B.1.438.1 | 0.00472 |
ORF3a | 57 | Q57H | caG | caT | 44 | 44 | B.1.438.4 | 0.93617 |
ORF3a | 57 | Q57H | caG | caC | 43 | 43 | B.1.1.283 | 1 |
ORF3a | 57 | Q57H | caG | caC | 26 | 43 | B.1.1.432 | 0.032911 |
ORF3a | 57 | Q57H | caG | caT | 17 | 43 | B.1.1.432 | 0.021519 |
ORF3a | 57 | Q57H | caG | caT | 43 | 43 | B.1.304 | 1 |
ORF3a | 57 | Q57H | caG | caT | 43 | 43 | B.1.341 | 0.977273 |
ORF3a | 57 | Q57H | caG | caT | 43 | 43 | B.1.359 | 0.977273 |
ORF3a | 57 | Q57H | caG | caT | 39 | 42 | AY.39 | 0.000964 |
ORF3a | 57 | Q57H | caG | caC | 3 | 42 | AY.39 | 0.000074 |
ORF3a | 57 | Q57R | cAg | cGg | 42 | 42 | B.1.1.7 | 0.000038 |
ORF3a | 57 | Q57H | caG | caT | 42 | 42 | B.1.277 | 1 |
ORF3a | 57 | Q57H | caG | caT | 42 | 42 | B.1.466 | 0.976744 |
ORF3a | 57 | Q57H | caG | caT | 42 | 42 | B.1.524 | 0.059072 |
ORF3a | 57 | Q57L | cAg | cTg | 29 | 41 | B.1.1.7 | 0.000026 |
ORF3a | 57 | Q57L | cAG | cTA | 12 | 41 | B.1.1.7 | 0.000011 |
ORF3a | 57 | Q57H | caG | caT | 41 | 41 | B.1.115 | 0.891304 |
ORF3a | 57 | Q57H | caG | caT | 40 | 41 | B.1.177.7 | 0.006594 |
ORF3a | 57 | Q57H | caG | caC | 1 | 41 | B.1.177.7 | 0.000165 |
ORF3a | 57 | Q57H | caG | caT | 41 | 41 | B.1.247 | 0.61194 |
ORF3a | 57 | Q57H | caG | caT | 41 | 41 | B.1.281 | 0.891304 |
ORF3a | 57 | Q57H | caG | caT | 41 | 41 | B.1.616 | 1 |
ORF3a | 57 | Q57R | cAg | cGg | 40 | 40 | AY.44 | 0.000243 |
ORF3a | 57 | Q57H | caG | caT | 40 | 40 | B.1.163 | 0.97561 |
ORF3a | 57 | Q57H | caG | caT | 40 | 40 | B.1.323 | 0.833333 |
ORF3a | 57 | Q57H | caG | caT | 40 | 40 | B.1.572 | 1 |
ORF3a | 57 | Q57H | caG | caT | 38 | 39 | AY.4.5 | 0.004085 |
ORF3a | 57 | Q57H | caG | caC | 1 | 39 | AY.4.5 | 0.000107 |
ORF3a | 57 | Q57R | cAg | cGg | 38 | 39 | AY.43 | 0.000168 |
ORF3a | 57 | Q57R | CAg | AGg | 1 | 39 | AY.43 | 0.000004 |
ORF3a | 57 | Q57H | caG | caT | 38 | 39 | B.1.396 | 0.026817 |
ORF3a | 57 | Q57H | caG | caC | 1 | 39 | B.1.396 | 0.000706 |
ORF3a | 57 | Q57H | caG | caT | 39 | 39 | B.1.493 | 1 |
ORF3a | 57 | Q57H | caG | caT | 39 | 39 | B.1.508 | 1 |
ORF3a | 57 | Q57H | caG | caT | 29 | 38 | AY.3 | 0.000288 |
ORF3a | 57 | Q57H | caG | caC | 9 | 38 | AY.3 | 0.00009 |
ORF3a | 57 | Q57H | caG | caT | 38 | 38 | B.1.157 | 0.113433 |
ORF3a | 57 | Q57H | caG | caT | 38 | 38 | B.1.177.44 | 0.01972 |
ORF3a | 57 | Q57H | caG | caT | 38 | 38 | B.1.506 | 0.904762 |
ORF3a | 57 | Q57H | caG | caT | 38 | 38 | B.1.595.3 | 1 |
ORF3a | 57 | Q57N | CaG | AaT | 37 | 37 | B.1.1.333 | 0.039828 |
ORF3a | 57 | Q57H | caG | caT | 37 | 37 | B.1.168 | 1 |
ORF3a | 57 | Q57H | caG | caT | 37 | 37 | B.1.369.1 | 1 |
ORF3a | 57 | Q57H | caG | caT | 37 | 37 | B.1.613 | 1 |
ORF3a | 57 | Q57H | caG | caT | 36 | 36 | B.1.160.13 | 1 |
ORF3a | 57 | Q57H | caG | caT | 34 | 34 | B.1.585 | 0.944444 |
ORF3a | 57 | Q57H | caG | caT | 33 | 33 | B.1.287 | 1 |
ORF3a | 57 | Q57H | caG | caT | 33 | 33 | B.1.330 | 0.942857 |
ORF3a | 57 | Q57H | caG | caT | 32 | 32 | B.1.22.1 | 1 |
ORF3a | 57 | Q57H | caG | caT | 32 | 32 | B.1.504 | 1 |
ORF3a | 57 | Q57H | caG | caT | 28 | 31 | B.1.239 | 0.034188 |
ORF3a | 57 | Q57H | caG | caC | 3 | 31 | B.1.239 | 0.003663 |
ORF3a | 57 | Q57H | caG | caT | 31 | 31 | B.1.245 | 0.96875 |
ORF3a | 57 | Q57H | caG | caT | 31 | 31 | B.1.294 | 1 |
ORF3a | 57 | Q57H | caG | caT | 31 | 31 | B.1.328 | 0.96875 |
ORF3a | 57 | Q57H | caG | caT | 31 | 31 | B.1.38 | 1 |
ORF3a | 57 | Q57H | caG | caT | 31 | 31 | B.1.601 | 0.939394 |
ORF3a | 57 | Q57H | caG | caT | 31 | 31 | B.1.9.1 | 1 |
ORF3a | 57 | Q57Q | caG | caA | 30 | 30 | AY.4 | 0.000047 |
ORF3a | 57 | Q57H | caG | caT | 30 | 30 | B.1.510 | 0.789474 |
ORF3a | 57 | Q57H | caG | caT | 30 | 30 | B.1.594 | 0.9375 |
ORF3a | 57 | Q57H | caG | caT | 29 | 29 | B.1.308 | 1 |
ORF3a | 57 | Q57H | caG | caT | 29 | 29 | B.1.321 | 1 |
ORF3a | 57 | Q57H | caG | caT | 29 | 29 | B.1.428.1 | 1 |
ORF3a | 57 | Q57H | caG | caT | 29 | 29 | B.1.428.2 | 0.966667 |
ORF3a | 57 | Q57H | caG | caT | 29 | 29 | B.1.494 | 1 |
ORF3a | 57 | Q57H | caG | caT | 28 | 28 | B.1.160.19 | 1 |
ORF3a | 57 | Q57L | cAG | cTA | 28 | 28 | B.1.241 | 0.022727 |
ORF3a | 57 | Q57H | caG | caT | 28 | 28 | B.1.442 | 1 |
ORF3a | 57 | Q57E | Cag | Gag | 27 | 27 | AY.4 | 0.000042 |
ORF3a | 57 | Q57H | caG | caT | 27 | 27 | B.1.1.445 | 1 |
ORF3a | 57 | Q57H | caG | caT | 20 | 26 | AY.4.2 | 0.000434 |
ORF3a | 57 | Q57H | caG | caC | 6 | 26 | AY.4.2 | 0.00013 |
ORF3a | 57 | Q57H | caG | caT | 25 | 26 | AY.5 | 0.000516 |
ORF3a | 57 | Q57H | caG | caC | 1 | 26 | AY.5 | 0.000021 |
ORF3a | 57 | Q57Y | CaG | TaT | 26 | 26 | B.1 | 0.000238 |
ORF3a | 57 | Q57H | caG | caT | 26 | 26 | B.1.1.50 | 0.017651 |
ORF3a | 57 | Q57H | caG | caT | 26 | 26 | B.1.318 | 1 |
ORF3a | 57 | Q57H | caG | caT | 26 | 26 | B.1.351.1 | 1 |
ORF3a | 57 | Q57H | caG | caT | 26 | 26 | B.1.588.1 | 1 |
ORF3a | 57 | Q57H | caG | caT | 26 | 26 | B.1.9.3 | 1 |
ORF3a | 57 | Q57H | caG | caT | 25 | 25 | B.1.1.58 | 0.134409 |
ORF3a | 57 | Q57H | caG | caT | 25 | 25 | B.1.431 | 1 |
ORF3a | 57 | Q57H | caG | caT | 25 | 25 | B.1.479 | 0.961538 |
ORF3a | 57 | Q57H | caG | caT | 25 | 25 | B.1.592 | 1 |
ORF3a | 57 | Q57H | caG | caT | 25 | 25 | B.1.595.2 | 1 |
ORF3a | 57 | Q57H | caG | caT | 25 | 25 | B.1.611 | 1 |
ORF3a | 57 | Q57H | caG | caT | 25 | 25 | B.1.615 | 1 |
ORF3a | 57 | Q57H | caG | caT | 24 | 24 | B.1.467 | 0.96 |
ORF3a | 57 | Q57H | caG | caT | 23 | 23 | A.23.1 | 0.016197 |
ORF3a | 57 | Q57L | cAg | cTg | 20 | 23 | AY.103 | 0.000124 |
ORF3a | 57 | Q57L | cAG | cTA | 3 | 23 | AY.103 | 0.000019 |
ORF3a | 57 | Q57H | caG | caT | 23 | 23 | B.1.128 | 0.014612 |
ORF3a | 57 | Q57H | caG | caT | 23 | 23 | B.1.158 | 0.547619 |
ORF3a | 57 | Q57H | caG | caT | 15 | 23 | B.1.240 | 0.003233 |
ORF3a | 57 | Q57H | caG | caC | 8 | 23 | B.1.240 | 0.001725 |
ORF3a | 57 | Q57Y | CaG | TaT | 23 | 23 | B.1.429 | 0.000541 |
ORF3a | 57 | Q57H | caG | caT | 23 | 23 | B.1.489 | 1 |
ORF3a | 57 | Q57H | caG | caT | 23 | 23 | B.1.511 | 0.793103 |
ORF3a | 57 | Q57H | caG | caT | 23 | 23 | B.1.554 | 0.101322 |
ORF3a | 57 | Q57H | caG | caT | 22 | 22 | B.1.1.312 | 0.042065 |
ORF3a | 57 | Q57H | caG | caT | 18 | 22 | B.1.1.70 | 0.006139 |
ORF3a | 57 | Q57H | caG | caC | 4 | 22 | B.1.1.70 | 0.001364 |
ORF3a | 57 | Q57E | Cag | Gag | 21 | 21 | B.1.232 | 0.011284 |
ORF3a | 57 | Q57H | caG | caT | 21 | 21 | B.1.258.11 | 0.008323 |
ORF3a | 57 | Q57H | caG | caT | 21 | 21 | B.1.263 | 1 |
ORF3a | 57 | Q57H | caG | caT | 21 | 21 | B.1.309 | 1 |
ORF3a | 57 | Q57H | caG | caT | 21 | 21 | B.1.310 | 1 |
ORF3a | 57 | Q57R | cAg | cGg | 20 | 20 | AY.75 | 0.00112 |
ORF3a | 57 | Q57H | caG | caC | 18 | 20 | AY.88 | 0.015915 |
ORF3a | 57 | Q57H | caG | caT | 2 | 20 | AY.88 | 0.001768 |
ORF3a | 57 | Q57Y | CaG | TaT | 17 | 20 | B.1.1.7 | 0.000015 |
ORF3a | 57 | Q57Y | CaG | TaC | 3 | 20 | B.1.1.7 | 0.000003 |
ORF3a | 57 | Q57H | caG | caT | 20 | 20 | B.1.264.1 | 0.952381 |
ORF3a | 57 | Q57H | caG | caT | 20 | 20 | B.1.354 | 0.869565 |
ORF3a | 57 | Q57H | caG | caT | 20 | 20 | B.1.358 | 1 |
ORF3a | 57 | Q57H | caG | caT | 19 | 19 | AY.39.1 | 0.000753 |
ORF3a | 57 | Q57H | caG | caT | 19 | 19 | B.1.502 | 1 |
ORF3a | 57 | Q57H | caG | caT | 19 | 19 | B.1.607 | 1 |
ORF3a | 57 | Q57H | caG | caT | 19 | 19 | B.1.636 | 0.127517 |
ORF3a | 57 | Q57H | caG | caT | 14 | 18 | AY.20 | 0.000544 |
ORF3a | 57 | Q57H | caG | caC | 4 | 18 | AY.20 | 0.000155 |
ORF3a | 57 | Q57H | caG | caT | 18 | 18 | B.1.434 | 0.947368 |
ORF3a | 57 | Q57H | caG | caT | 18 | 18 | B.1.491 | 0.947368 |
ORF3a | 57 | Q57Y | CaG | TaT | 18 | 18 | B.1.621 | 0.001593 |
ORF3a | 57 | Q57H | caG | caC | 10 | 18 | C.37 | 0.001161 |
ORF3a | 57 | Q57H | caG | caT | 8 | 18 | C.37 | 0.000929 |
ORF3a | 57 | Q57H | caG | caT | 18 | 18 | P.1.17 | 0.002912 |
ORF3a | 57 | Q57H | caG | caT | 13 | 18 | Q.8 | 0.002144 |
ORF3a | 57 | Q57H | caG | caC | 5 | 18 | Q.8 | 0.000825 |
ORF3a | 57 | Q57H | caG | caT | 10 | 17 | AY.100 | 0.00046 |
ORF3a | 57 | Q57H | caG | caC | 7 | 17 | AY.100 | 0.000322 |
ORF3a | 57 | Q57H | caG | caT | 16 | 17 | B.1.1.416 | 0.01448 |
ORF3a | 57 | Q57H | caG | caC | 1 | 17 | B.1.1.416 | 0.000905 |
ORF3a | 57 | Q57H | caG | caC | 17 | 17 | B.1.1.420 | 0.017103 |
ORF3a | 57 | Q57H | caG | caT | 17 | 17 | B.1.292 | 1 |
ORF3a | 57 | Q57H | caG | caT | 17 | 17 | B.1.618 | 0.068548 |
ORF3a | 57 | Q57H | caG | caT | 15 | 17 | P.1.14 | 0.000717 |
ORF3a | 57 | Q57H | caG | caC | 2 | 17 | P.1.14 | 0.000096 |
ORF3a | 57 | Q57del1 | caG | ca- | 13 | 16 | All | 0.000002 |
ORF3a | 57 | Q57del1 | Cag | -ag | 3 | 16 | All | 0.000001 |
ORF3a | 57 | Q57K | Cag | Aag | 16 | 16 | AY.43 | 0.000071 |
ORF3a | 57 | Q57Q | caG | caA | 16 | 16 | AY.44 | 0.000097 |
ORF3a | 57 | Q57R | cAg | cGg | 16 | 16 | AY.9.2 | 0.000588 |
ORF3a | 57 | Q57H | caG | caC | 14 | 16 | B.1.1.306 | 0.006138 |
ORF3a | 57 | Q57H | caG | caT | 2 | 16 | B.1.1.306 | 0.000877 |
ORF3a | 57 | Q57Y | CaG | TaT | 16 | 16 | B.1.160 | 0.000499 |
ORF3a | 57 | Q57H | caG | caT | 16 | 16 | P.1.10 | 0.004312 |
ORF3a | 57 | Q57H | caG | caT | 15 | 15 | AY.118 | 0.00094 |
ORF3a | 57 | Q57H | caG | caT | 9 | 15 | AY.29 | 0.000142 |
ORF3a | 57 | Q57H | caG | caC | 6 | 15 | AY.29 | 0.000095 |
ORF3a | 57 | Q57K | CaG | AaA | 15 | 15 | B.1 | 0.000137 |
ORF3a | 57 | Q57H | caG | caT | 12 | 15 | B.1.1.263 | 0.018692 |
ORF3a | 57 | Q57H | caG | caC | 3 | 15 | B.1.1.263 | 0.004673 |
ORF3a | 57 | Q57Y | CaG | TaT | 15 | 15 | B.1.351 | 0.000446 |
ORF3a | 57 | Q57H | caG | caT | 15 | 15 | B.1.362.1 | 1 |
ORF3a | 57 | Q57H | caG | caT | 15 | 15 | B.1.638 | 0.789474 |
ORF3a | 57 | Q57H | caG | caC | 7 | 14 | AY.47 | 0.000218 |
ORF3a | 57 | Q57H | caG | caT | 7 | 14 | AY.47 | 0.000218 |
ORF3a | 57 | Q57R | cAg | cGg | 10 | 14 | B.1 | 0.000092 |
ORF3a | 57 | Q57R | cAG | cGT | 4 | 14 | B.1 | 0.000037 |
ORF3a | 57 | Q57H | caG | caT | 7 | 14 | B.1.1.214 | 0.000388 |
ORF3a | 57 | Q57H | caG | caC | 7 | 14 | B.1.1.214 | 0.000388 |
ORF3a | 57 | Q57H | caG | caT | 13 | 14 | B.1.1.222 | 0.002652 |
ORF3a | 57 | Q57H | caG | caC | 1 | 14 | B.1.1.222 | 0.000204 |
ORF3a | 57 | Q57H | caG | caT | 14 | 14 | B.1.500 | 0.736842 |
ORF3a | 57 | Q57H | caG | caT | 14 | 14 | B.1.561 | 0.005558 |
ORF3a | 57 | Q57H | caG | caT | 9 | 14 | B.1.617.1 | 0.001161 |
ORF3a | 57 | Q57H | caG | caC | 5 | 14 | B.1.617.1 | 0.000645 |
ORF3a | 57 | Q57R | cAg | cGg | 13 | 13 | AY.39 | 0.000321 |
ORF3a | 57 | Q57R | cAg | cGg | 13 | 13 | AY.68 | 0.003559 |
ORF3a | 57 | Q57H | caG | caT | 13 | 13 | B.1.438.3 | 1 |
ORF3a | 57 | Q57H | caG | caT | 13 | 13 | B.1.609 | 0.006232 |
ORF3a | 57 | Q57H | caG | caT | 10 | 12 | AY.33 | 0.000668 |
ORF3a | 57 | Q57H | caG | caC | 2 | 12 | AY.33 | 0.000134 |
ORF3a | 57 | Q57H | caG | caT | 6 | 12 | AY.61 | 0.000629 |
ORF3a | 57 | Q57H | caG | caC | 6 | 12 | AY.61 | 0.000629 |
ORF3a | 57 | Q57L | cAG | cTT | 11 | 12 | AY.75 | 0.000616 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 12 | AY.75 | 0.000056 |
ORF3a | 57 | Q57Q | caG | caA | 12 | 12 | B.1.177.75 | 0.012487 |
ORF3a | 57 | Q57Y | CaG | TaT | 12 | 12 | B.1.427 | 0.000606 |
ORF3a | 57 | Q57H | caG | caT | 12 | 12 | B.1.482 | 1 |
ORF3a | 57 | Q57H | caG | caT | 12 | 12 | P.1.12 | 0.005808 |
ORF3a | 57 | Q57H | caG | caT | 11 | 12 | R.1 | 0.00099 |
ORF3a | 57 | Q57H | caG | caC | 1 | 12 | R.1 | 0.00009 |
ORF3a | 57 | Q57H | caG | caC | 9 | 11 | AY.46.4 | 0.001481 |
ORF3a | 57 | Q57H | caG | caT | 2 | 11 | AY.46.4 | 0.000329 |
ORF3a | 57 | Q57H | caG | caT | 11 | 11 | AY.9.1 | 0.000921 |
ORF3a | 57 | Q57H | caG | caT | 11 | 11 | B.1.177.31 | 0.126437 |
ORF3a | 57 | Q57H | caG | caT | 11 | 11 | B.1.177.43 | 0.016248 |
ORF3a | 57 | Q57H | caG | caT | 11 | 11 | B.1.214 | 0.040293 |
ORF3a | 57 | Q57H | caG | caT | 11 | 11 | B.1.400 | 0.004719 |
ORF3a | 57 | Q57L | cAg | cTg | 11 | 11 | P.1.7 | 0.003512 |
ORF3a | 57 | Q57H | caG | caT | 10 | 10 | A.2.5 | 0.00499 |
ORF3a | 57 | Q57H | caG | caT | 8 | 10 | AY.120 | 0.000297 |
ORF3a | 57 | Q57H | caG | caC | 2 | 10 | AY.120 | 0.000074 |
ORF3a | 57 | Q57H | caG | caT | 10 | 10 | AY.46 | 0.001041 |
ORF3a | 57 | Q57R | cAg | cGg | 10 | 10 | AY.55 | 0.009174 |
ORF3a | 57 | Q57H | caG | caT | 8 | 10 | B.1.1.216 | 0.007124 |
ORF3a | 57 | Q57H | caG | caC | 2 | 10 | B.1.1.216 | 0.001781 |
ORF3a | 57 | Q57H | caG | caT | 10 | 10 | B.1.1.316 | 0.009251 |
ORF3a | 57 | Q57del | CAG | --- | 10 | 10 | B.1.1.7 | 0.000009 |
ORF3a | 57 | Q57H | caG | caT | 10 | 10 | B.1.110.1 | 1 |
ORF3a | 57 | Q57H | caG | caT | 10 | 10 | B.1.139 | 0.007331 |
ORF3a | 57 | Q57R | cAG | cGT | 10 | 10 | B.1.2 | 0.000088 |
ORF3a | 57 | Q57L | cAG | cTA | 8 | 10 | B.1.2 | 0.00007 |
ORF3a | 57 | Q57L | cAG | cTT | 2 | 10 | B.1.2 | 0.000018 |
ORF3a | 57 | Q57H | caG | caT | 10 | 10 | B.1.232 | 0.005373 |
ORF3a | 57 | Q57H | caG | caT | 10 | 10 | B.1.490 | 1 |
ORF3a | 57 | Q57H | caG | caT | 10 | 10 | B.1.9.2 | 1 |
ORF3a | 57 | Q57H | caG | caT | 10 | 10 | B.4.1 | 0.188679 |
ORF3a | 57 | Q57Q | caG | caA | 10 | 10 | C.3 | 0.076336 |
ORF3a | 57 | Q57R | cAg | cGg | 9 | 9 | AY.102 | 0.000239 |
ORF3a | 57 | Q57K | CaG | AaA | 9 | 9 | AY.3.1 | 0.000767 |
ORF3a | 57 | Q57H | caG | caT | 6 | 9 | AY.45 | 0.00073 |
ORF3a | 57 | Q57H | caG | caC | 3 | 9 | AY.45 | 0.000365 |
ORF3a | 57 | Q57K | Cag | Aag | 9 | 9 | B.1.1.7 | 0.000008 |
ORF3a | 57 | Q57H | caG | caT | 7 | 9 | B.1.177.81 | 0.001325 |
ORF3a | 57 | Q57H | caG | caC | 2 | 9 | B.1.177.81 | 0.000379 |
ORF3a | 57 | Q57H | caG | caT | 9 | 9 | B.1.316 | 1 |
ORF3a | 57 | Q57H | caG | caT | 9 | 9 | B.1.458 | 1 |
ORF3a | 57 | Q57H | caG | caT | 9 | 9 | B.1.483 | 1 |
ORF3a | 57 | Q57H | caG | caT | 9 | 9 | B.1.486 | 1 |
ORF3a | 57 | Q57H | caG | caT | 9 | 9 | B.1.499.1 | 1 |
ORF3a | 57 | Q57H | caG | caT | 6 | 9 | B.1.525 | 0.000679 |
ORF3a | 57 | Q57H | caG | caC | 3 | 9 | B.1.525 | 0.000339 |
ORF3a | 57 | Q57H | caG | caT | 9 | 9 | P.2 | 0.00168 |
ORF3a | 57 | Q57R | cAg | cGg | 8 | 8 | AY.13 | 0.001288 |
ORF3a | 57 | Q57R | cAg | cGg | 8 | 8 | AY.37 | 0.002528 |
ORF3a | 57 | Q57H | caG | caT | 6 | 8 | AY.6 | 0.000247 |
ORF3a | 57 | Q57H | caG | caC | 2 | 8 | AY.6 | 0.000082 |
ORF3a | 57 | Q57R | cAg | cGg | 8 | 8 | AY.65 | 0.004264 |
ORF3a | 57 | Q57R | cAg | cGg | 8 | 8 | AY.9.1 | 0.00067 |
ORF3a | 57 | Q57H | caG | caT | 8 | 8 | B.1.1.192 | 0.018476 |
ORF3a | 57 | Q57H | caG | caT | 8 | 8 | B.1.1.28 | 0.00249 |
ORF3a | 57 | Q57H | caG | caT | 8 | 8 | B.1.1.434 | 0.002788 |
ORF3a | 57 | Q57H | caG | caT | 8 | 8 | B.1.177.86 | 0.001468 |
ORF3a | 57 | Q57H | caG | caT | 8 | 8 | B.1.214.2 | 0.004796 |
ORF3a | 57 | Q57H | caG | caT | 8 | 8 | B.1.342 | 0.8 |
ORF3a | 57 | Q57H | caG | caT | 8 | 8 | B.1.476 | 0.8 |
ORF3a | 57 | Q57H | caG | caT | 8 | 8 | B.1.614 | 1 |
ORF3a | 57 | Q57Q | caG | caA | 8 | 8 | B.1.617.2 | 0.00003 |
ORF3a | 57 | Q57H | caG | caT | 8 | 8 | B.1.78 | 0.068376 |
ORF3a | 57 | Q57H | caG | caT | 8 | 8 | P.1.1 | 0.002541 |
ORF3a | 57 | Q57Q | caG | caA | 7 | 7 | AY.25 | 0.000042 |
ORF3a | 57 | Q57Q | caG | caA | 7 | 7 | AY.39 | 0.000173 |
ORF3a | 57 | Q57R | cAg | cGg | 6 | 7 | AY.47 | 0.000187 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 7 | AY.47 | 0.000031 |
ORF3a | 57 | Q57H | caG | caT | 6 | 7 | AY.54 | 0.000572 |
ORF3a | 57 | Q57H | caG | caC | 1 | 7 | AY.54 | 0.000095 |
ORF3a | 57 | Q57H | caG | caC | 7 | 7 | AY.7.1 | 0.000789 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | AY.75 | 0.000392 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | AY.95 | 0.005327 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | AY.98.1 | 0.000339 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | B.1.1.1 | 0.002287 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | B.1.1.37 | 0.00135 |
ORF3a | 57 | Q57E | Cag | Gag | 7 | 7 | B.1.1.7 | 0.000006 |
ORF3a | 57 | Q57X | Cag | Tag | 7 | 7 | B.1.1.7 | 0.000006 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | B.1.126 | 0.008929 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | B.1.177.63 | 0.018919 |
ORF3a | 57 | Q57H | caG | caC | 6 | 7 | B.1.177.82 | 0.002864 |
ORF3a | 57 | Q57H | caG | caT | 1 | 7 | B.1.177.82 | 0.000477 |
ORF3a | 57 | Q57N | CaG | AaT | 7 | 7 | B.1.2 | 0.000062 |
ORF3a | 57 | Q57H | caG | caT | 4 | 7 | B.1.241 | 0.003247 |
ORF3a | 57 | Q57H | caG | caC | 3 | 7 | B.1.241 | 0.002435 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | B.1.350.1 | 1 |
ORF3a | 57 | Q57R | cAG | cGT | 7 | 7 | B.1.351 | 0.000208 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | B.1.399 | 0.01354 |
ORF3a | 57 | Q57L | cAG | cTT | 7 | 7 | B.1.427 | 0.000353 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | B.1.475 | 1 |
ORF3a | 57 | Q57H | caG | caT | 7 | 7 | B.1.496 | 0.875 |
ORF3a | 57 | Q57Y | CaG | TaT | 7 | 7 | B.1.596 | 0.00061 |
ORF3a | 57 | Q57H | caG | caT | 6 | 7 | B.1.8 | 0.011834 |
ORF3a | 57 | Q57H | caG | caC | 1 | 7 | B.1.8 | 0.001972 |
ORF3a | 57 | Q57H | caG | caT | 4 | 6 | AY.116 | 0.001147 |
ORF3a | 57 | Q57H | caG | caC | 2 | 6 | AY.116 | 0.000574 |
ORF3a | 57 | Q57H | caG | caT | 5 | 6 | AY.121 | 0.000677 |
ORF3a | 57 | Q57H | caG | caC | 1 | 6 | AY.121 | 0.000135 |
ORF3a | 57 | Q57H | caG | caT | 5 | 6 | AY.30 | 0.001979 |
ORF3a | 57 | Q57H | caG | caC | 1 | 6 | AY.30 | 0.000396 |
ORF3a | 57 | Q57H | caG | caT | 5 | 6 | AY.34 | 0.000485 |
ORF3a | 57 | Q57H | caG | caC | 1 | 6 | AY.34 | 0.000097 |
ORF3a | 57 | Q57E | Cag | Gag | 6 | 6 | AY.4.3 | 0.005051 |
ORF3a | 57 | Q57R | cAg | cGg | 5 | 6 | AY.45 | 0.000608 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 6 | AY.45 | 0.000122 |
ORF3a | 57 | Q57H | caG | caT | 4 | 6 | AY.9.2 | 0.000147 |
ORF3a | 57 | Q57H | caG | caC | 2 | 6 | AY.9.2 | 0.000073 |
ORF3a | 57 | Q57H | caG | caT | 6 | 6 | B.1.1.269 | 0.008119 |
ORF3a | 57 | Q57H | caG | caT | 6 | 6 | B.1.104 | 0.02214 |
ORF3a | 57 | Q57H | caG | caT | 6 | 6 | B.1.110.2 | 1 |
ORF3a | 57 | Q57R | cAG | cGT | 6 | 6 | B.1.160 | 0.000187 |
ORF3a | 57 | Q57del | CAG | --- | 6 | 6 | B.1.177 | 0.000079 |
ORF3a | 57 | Q57Y | CaG | TaT | 6 | 6 | B.1.346 | 0.007864 |
ORF3a | 57 | Q57R | cAG | cGT | 6 | 6 | B.1.40 | 0.117647 |
ORF3a | 57 | Q57H | caG | caT | 5 | 6 | B.1.628 | 0.001762 |
ORF3a | 57 | Q57H | caG | caC | 1 | 6 | B.1.628 | 0.000352 |
ORF3a | 57 | Q57H | caG | caT | 6 | 6 | B.3 | 0.004983 |
ORF3a | 57 | Q57H | caG | caT | 6 | 6 | B.55 | 0.017699 |
ORF3a | 57 | Q57H | caG | caT | 5 | 6 | C.16 | 0.005302 |
ORF3a | 57 | Q57H | caG | caC | 1 | 6 | C.16 | 0.00106 |
ORF3a | 57 | Q57Q | caG | caA | 6 | 6 | P.1 | 0.000095 |
ORF3a | 57 | Q57H | caG | caT | 6 | 6 | P.1.15 | 0.001394 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | A.2 | 0.003309 |
ORF3a | 57 | Q57D | CaG | GaT | 5 | 5 | All | 0.000001 |
ORF3a | 57 | Q57R | cAg | cGg | 5 | 5 | AY.10 | 0.00265 |
ORF3a | 57 | Q57X | Cag | Tag | 5 | 5 | AY.4 | 0.000008 |
ORF3a | 57 | Q57R | cAg | cGg | 4 | 5 | AY.52 | 0.003257 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 5 | AY.52 | 0.000814 |
ORF3a | 57 | Q57R | cAg | cGg | 5 | 5 | AY.67 | 0.002321 |
ORF3a | 57 | Q57K | Cag | Aag | 5 | 5 | AY.91 | 0.003652 |
ORF3a | 57 | Q57R | cAg | cGg | 5 | 5 | AY.98 | 0.000395 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.1.258 | 0.016287 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.1.289 | 0.010417 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.1.33 | 0.002104 |
ORF3a | 57 | Q57H | caG | caT | 4 | 5 | B.1.1.372 | 0.002755 |
ORF3a | 57 | Q57H | caG | caC | 1 | 5 | B.1.1.372 | 0.000689 |
ORF3a | 57 | Q57H | caG | caT | 4 | 5 | B.1.103 | 0.076923 |
ORF3a | 57 | Q57H | caG | caC | 1 | 5 | B.1.103 | 0.019231 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.177.45 | 0.001906 |
ORF3a | 57 | Q57H | caG | caC | 4 | 5 | B.1.177.57 | 0.001124 |
ORF3a | 57 | Q57H | caG | caT | 1 | 5 | B.1.177.57 | 0.000281 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.190 | 0.05 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.409 | 0.003906 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.416 | 0.006345 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.488 | 1 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.546 | 0.018519 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.565 | 0.004052 |
ORF3a | 57 | Q57Y | CaG | TaT | 5 | 5 | B.1.575 | 0.001517 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.619 | 0.004355 |
ORF3a | 57 | Q57H | caG | caC | 3 | 5 | B.1.620 | 0.002838 |
ORF3a | 57 | Q57H | caG | caT | 2 | 5 | B.1.620 | 0.001892 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | B.1.81 | 0.106383 |
ORF3a | 57 | Q57H | caG | caT | 4 | 5 | B.1.94 | 0.108108 |
ORF3a | 57 | Q57H | caG | caC | 1 | 5 | B.1.94 | 0.027027 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | N.5 | 0.008834 |
ORF3a | 57 | Q57E | Cag | Gag | 5 | 5 | P.1 | 0.000079 |
ORF3a | 57 | Q57H | caG | caT | 5 | 5 | P.1.7 | 0.001596 |
ORF3a | 57 | Q57H | caG | caT | 4 | 5 | Q.1 | 0.000505 |
ORF3a | 57 | Q57H | caG | caC | 1 | 5 | Q.1 | 0.000126 |
ORF3a | 57 | Q57Y | CaG | TaT | 5 | 5 | Q.7 | 0.005556 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | 0.222222 | |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | A.1 | 0.001127 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | A.2.5.2 | 0.006289 |
ORF3a | 57 | Q57W | CAg | TGg | 4 | 4 | All | 0.000001 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | AY.1 | 0.001583 |
ORF3a | 57 | Q57R | cAg | cGg | 4 | 4 | AY.100 | 0.000184 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | AY.111 | 0.000733 |
ORF3a | 57 | Q57H | caG | caT | 3 | 4 | AY.119 | 0.000106 |
ORF3a | 57 | Q57H | caG | caC | 1 | 4 | AY.119 | 0.000035 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | AY.16.1 | 0.00188 |
ORF3a | 57 | Q57del | CAG | --- | 4 | 4 | AY.4 | 0.000006 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | AY.4.3 | 0.003367 |
ORF3a | 57 | Q57X | Cag | Tag | 4 | 4 | AY.43 | 0.000018 |
ORF3a | 57 | Q57X | Cag | Tag | 4 | 4 | AY.44 | 0.000024 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | AY.46.1 | 0.004107 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | AY.64 | 0.002381 |
ORF3a | 57 | Q57H | caG | caT | 3 | 4 | AY.9 | 0.000203 |
ORF3a | 57 | Q57H | caG | caC | 1 | 4 | AY.9 | 0.000068 |
ORF3a | 57 | Q57Y | CaG | TaC | 4 | 4 | AY.9.2 | 0.000147 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.1.226 | 0.023256 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.1.464 | 0.005891 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.1.528 | 0.019231 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.140 | 0.075472 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.177.6 | 0.003906 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.177.60 | 0.000874 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.177.75 | 0.004162 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.181 | 0.078431 |
ORF3a | 57 | Q57H | caG | caT | 3 | 4 | B.1.189 | 0.012876 |
ORF3a | 57 | Q57H | caG | caC | 1 | 4 | B.1.189 | 0.004292 |
ORF3a | 57 | Q57H | caG | caT | 3 | 4 | B.1.210 | 0.006397 |
ORF3a | 57 | Q57H | caG | caC | 1 | 4 | B.1.210 | 0.002132 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.236 | 0.008214 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.378 | 0.027397 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.398 | 0.011905 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.417 | 0.114286 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.527 | 0.014815 |
ORF3a | 57 | Q57L | cAg | cTg | 3 | 4 | B.1.617.2 | 0.000011 |
ORF3a | 57 | Q57L | cAG | cTA | 1 | 4 | B.1.617.2 | 0.000004 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.1.88.1 | 0.019231 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | B.6.6 | 0.003556 |
ORF3a | 57 | Q57H | caG | caT | 4 | 4 | C.35 | 0.003096 |
ORF3a | 57 | Q57H | caG | caC | 4 | 4 | P.1.2 | 0.004624 |
ORF3a | 57 | Q57X | Cag | Tag | 3 | 3 | 0.166667 | |
ORF3a | 57 | Q57L | cAg | cTg | 2 | 3 | 0.111111 | |
ORF3a | 57 | Q57P | cAg | cCg | 2 | 3 | 0.111111 | |
ORF3a | 57 | Q57P | cAG | cCT | 1 | 3 | 0.055556 | |
ORF3a | 57 | Q57L | cAG | cTT | 1 | 3 | 0.055556 | |
ORF3a | 57 | Q57P | cAg | cCg | 2 | 3 | All | 0 |
ORF3a | 57 | Q57P | cAG | cCT | 1 | 3 | All | 0 |
ORF3a | 57 | Q57E | Cag | Gag | 3 | 3 | AY.103 | 0.000019 |
ORF3a | 57 | Q57H | caG | caT | 2 | 3 | AY.106 | 0.00067 |
ORF3a | 57 | Q57H | caG | caC | 1 | 3 | AY.106 | 0.000335 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | AY.114 | 0.000693 |
ORF3a | 57 | Q57H | caG | caC | 2 | 3 | AY.13 | 0.000322 |
ORF3a | 57 | Q57H | caG | caT | 1 | 3 | AY.13 | 0.000161 |
ORF3a | 57 | Q57R | cAg | cGg | 3 | 3 | AY.23 | 0.000209 |
ORF3a | 57 | Q57H | caG | caT | 2 | 3 | AY.24 | 0.000862 |
ORF3a | 57 | Q57H | caG | caC | 1 | 3 | AY.24 | 0.000431 |
ORF3a | 57 | Q57H | caG | caC | 3 | 3 | AY.27 | 0.000194 |
ORF3a | 57 | Q57L | cAG | cTA | 3 | 3 | AY.29 | 0.000047 |
ORF3a | 57 | Q57H | caG | caT | 2 | 3 | AY.32 | 0.001065 |
ORF3a | 57 | Q57H | caG | caC | 1 | 3 | AY.32 | 0.000532 |
ORF3a | 57 | Q57R | cAg | cGg | 3 | 3 | AY.38 | 0.001498 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | AY.38 | 0.001498 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | AY.39.1.1 | 0.002174 |
ORF3a | 57 | Q57L | cAG | cTA | 2 | 3 | AY.4.2 | 0.000043 |
ORF3a | 57 | Q57L | CAg | TTg | 1 | 3 | AY.4.2 | 0.000022 |
ORF3a | 57 | Q57del | CAG | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF3a | 57 | Q57R | cAg | cGg | 3 | 3 | AY.40 | 0.002893 |
ORF3a | 57 | Q57Y | CaG | TaT | 3 | 3 | AY.44 | 0.000018 |
ORF3a | 57 | Q57L | cAg | cTg | 2 | 3 | AY.44 | 0.000012 |
ORF3a | 57 | Q57L | cAG | cTA | 1 | 3 | AY.44 | 0.000006 |
ORF3a | 57 | Q57H | caG | caC | 2 | 3 | AY.46.6 | 0.000144 |
ORF3a | 57 | Q57H | caG | caT | 1 | 3 | AY.46.6 | 0.000072 |
ORF3a | 57 | Q57L | cAG | cTA | 3 | 3 | AY.47 | 0.000093 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | AY.5.4 | 0.00083 |
ORF3a | 57 | Q57R | cAg | cGg | 3 | 3 | AY.54 | 0.000286 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | AY.7 | 0.000588 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | AY.85 | 0.001282 |
ORF3a | 57 | Q57H | caG | caC | 3 | 3 | AY.99.2 | 0.000276 |
ORF3a | 57 | Q57X | Cag | Tag | 3 | 3 | B.1 | 0.000027 |
ORF3a | 57 | Q57N | CaG | AaT | 3 | 3 | B.1 | 0.000027 |
ORF3a | 57 | Q57del1 | caG | ca- | 3 | 3 | B.1.1 | 0.000054 |
ORF3a | 57 | Q57R | cAg | cGg | 3 | 3 | B.1.1 | 0.000054 |
ORF3a | 57 | Q57H | caG | caC | 3 | 3 | B.1.1.176 | 0.001318 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.1.189 | 0.004539 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.1.210 | 0.017143 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.1.243 | 0.012245 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.1.317 | 0.001235 |
ORF3a | 57 | Q57Q | caG | caA | 3 | 3 | B.1.1.372 | 0.002066 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.1.377 | 0.004144 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.1.466 | 0.026087 |
ORF3a | 57 | Q57Q | caG | caA | 3 | 3 | B.1.177 | 0.00004 |
ORF3a | 57 | Q57H | caG | caC | 3 | 3 | B.1.177.4 | 0.000633 |
ORF3a | 57 | Q57H | caG | caC | 2 | 3 | B.1.177.42 | 0.001789 |
ORF3a | 57 | Q57H | caG | caT | 1 | 3 | B.1.177.42 | 0.000894 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.184 | 0.176471 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.212 | 0.05 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.235 | 0.007557 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.237 | 0.014925 |
ORF3a | 57 | Q57del1 | caG | ca- | 3 | 3 | B.1.247 | 0.044776 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.258.17 | 0.000312 |
ORF3a | 57 | Q57Y | CaG | TaT | 3 | 3 | B.1.311 | 0.000824 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.390 | 0.031915 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.397 | 0.014563 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.415.1 | 0.022727 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.416.1 | 0.004687 |
ORF3a | 57 | Q57N | CaG | AaT | 3 | 3 | B.1.429 | 0.000071 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.550 | 0.041096 |
ORF3a | 57 | Q57X | Cag | Tag | 3 | 3 | B.1.617.2 | 0.000011 |
ORF3a | 57 | Q57K | Cag | Aag | 3 | 3 | B.1.617.2 | 0.000011 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.1.633 | 0.125 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.35 | 0.023438 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | B.6 | 0.00273 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | C.17 | 0.166667 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | C.36.3 | 0.001702 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | D.2 | 0.000225 |
ORF3a | 57 | Q57K | Cag | Aag | 3 | 3 | P.1.10 | 0.000808 |
ORF3a | 57 | Q57Q | caG | caA | 3 | 3 | P.1.14 | 0.000143 |
ORF3a | 57 | Q57H | caG | caT | 3 | 3 | Q.4 | 0.001364 |
ORF3a | 57 | Q57H | caG | caT | 2 | 3 | Q.7 | 0.002222 |
ORF3a | 57 | Q57H | caG | caC | 1 | 3 | Q.7 | 0.001111 |
ORF3a | 57 | Q57del | CAG | --- | 3 | 3 | U.3 | 0.011583 |
ORF3a | 57 | Q57E | Cag | Gag | 2 | 2 | 0.111111 | |
ORF3a | 57 | Q57D | CaG | GaT | 2 | 2 | 0.111111 | |
ORF3a | 57 | Q57K | Cag | Aag | 2 | 2 | 0.111111 | |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | A.23 | 0.021053 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.101 | 0.000981 |
ORF3a | 57 | Q57K | Cag | Aag | 2 | 2 | AY.103 | 0.000012 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.110 | 0.000225 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.113 | 0.000285 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.116.1 | 0.000623 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.117 | 0.000169 |
ORF3a | 57 | Q57H | caG | caT | 1 | 2 | AY.12 | 0.000316 |
ORF3a | 57 | Q57H | caG | caC | 1 | 2 | AY.12 | 0.000316 |
ORF3a | 57 | Q57L | cAg | cTg | 2 | 2 | AY.120 | 0.000074 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 2 | AY.120 | 0.000037 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 2 | AY.120 | 0.000037 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.14 | 0.000176 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.25 | 0.000012 |
ORF3a | 57 | Q57X | Cag | Tag | 2 | 2 | AY.25 | 0.000012 |
ORF3a | 57 | Q57X | Cag | Tag | 2 | 2 | AY.3 | 0.00002 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.30 | 0.000791 |
ORF3a | 57 | Q57H | caG | caC | 1 | 2 | AY.35 | 0.000233 |
ORF3a | 57 | Q57H | caG | caT | 1 | 2 | AY.35 | 0.000233 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.36 | 0.000296 |
ORF3a | 57 | Q57Y | CaG | TaC | 1 | 2 | AY.4 | 0.000002 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 2 | AY.4 | 0.000002 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF3a | 57 | Q57L | cAg | cTg | 2 | 2 | AY.4.5 | 0.000215 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.40 | 0.001929 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.41 | 0.000588 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.42 | 0.00008 |
ORF3a | 57 | Q57L | cAg | cTg | 2 | 2 | AY.43 | 0.000009 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.46 | 0.000208 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.46.3 | 0.001867 |
ORF3a | 57 | Q57H | caG | caT | 1 | 2 | AY.48 | 0.000465 |
ORF3a | 57 | Q57H | caG | caC | 1 | 2 | AY.48 | 0.000465 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.49 | 0.00639 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.5.3 | 0.000675 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.5.4 | 0.000553 |
ORF3a | 57 | Q57W | CAg | TGg | 2 | 2 | AY.51 | 0.001818 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.52 | 0.001629 |
ORF3a | 57 | Q57H | caG | caC | 1 | 2 | AY.62 | 0.000436 |
ORF3a | 57 | Q57H | caG | caT | 1 | 2 | AY.62 | 0.000436 |
ORF3a | 57 | Q57X | Cag | Tag | 2 | 2 | AY.65 | 0.001066 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.68 | 0.000547 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.71 | 0.00095 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.73 | 0.001331 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.75.1 | 0.000361 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.75.1 | 0.000361 |
ORF3a | 57 | Q57K | Cag | Aag | 2 | 2 | AY.81 | 0.003984 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | AY.84 | 0.000875 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | AY.85 | 0.000854 |
ORF3a | 57 | Q57H | caG | caC | 2 | 2 | AY.89 | 0.009804 |
ORF3a | 57 | Q57H | caG | caC | 1 | 2 | AY.98 | 0.000079 |
ORF3a | 57 | Q57H | caG | caT | 1 | 2 | AY.98 | 0.000079 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | AY.98.1 | 0.000097 |
ORF3a | 57 | Q57L | cAG | cTA | 1 | 2 | B | 0.000128 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 2 | B | 0.000128 |
ORF3a | 57 | Q57Q | caG | caA | 2 | 2 | B.1 | 0.000018 |
ORF3a | 57 | Q57del1 | caG | ca- | 2 | 2 | B.1 | 0.000018 |
ORF3a | 57 | Q57del | CAG | --- | 2 | 2 | B.1 | 0.000018 |
ORF3a | 57 | Q57X | Cag | Tag | 2 | 2 | B.1.1 | 0.000036 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 2 | B.1.1 | 0.000018 |
ORF3a | 57 | Q57Y | CaG | TaC | 1 | 2 | B.1.1 | 0.000018 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.118 | 0.020408 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.161 | 0.007067 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.171 | 0.007353 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.207 | 0.002364 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.219 | 0.01 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.229 | 0.011494 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.231 | 0.006192 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.236 | 0.013793 |
ORF3a | 57 | Q57H | caG | caC | 2 | 2 | B.1.1.240 | 0.00939 |
ORF3a | 57 | Q57H | caG | caC | 1 | 2 | B.1.1.25 | 0.000569 |
ORF3a | 57 | Q57H | caG | caT | 1 | 2 | B.1.1.25 | 0.000569 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.277 | 0.001517 |
ORF3a | 57 | Q57H | caG | caT | 1 | 2 | B.1.1.318 | 0.000302 |
ORF3a | 57 | Q57H | caG | caC | 1 | 2 | B.1.1.318 | 0.000302 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.326 | 0.003521 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.366 | 0.031746 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.413 | 0.013793 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.421 | 0.060606 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.486 | 0.003155 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.1.507 | 0.017391 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.51 | 0.003436 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.1.98 | 0.037037 |
ORF3a | 57 | Q57Q | caG | caA | 2 | 2 | B.1.14 | 0.035088 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.147 | 0.001512 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.160.16 | 0.001859 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.160.26 | 0.004843 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 2 | B.1.177 | 0.000013 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 2 | B.1.177 | 0.000013 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.177.23 | 0.006472 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.177.56 | 0.001335 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.179 | 0.007519 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.211 | 0.05 |
ORF3a | 57 | Q57del1 | caG | ca- | 2 | 2 | B.1.214 | 0.007326 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.214.1 | 0.04 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.214.3 | 0.014286 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.223 | 0.005556 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.243.1 | 0.044444 |
ORF3a | 57 | Q57N | CaG | AaT | 2 | 2 | B.1.351.5 | 0.001199 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.354 | 0.086957 |
ORF3a | 57 | Q57del1 | caG | ca- | 2 | 2 | B.1.36 | 0.000292 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.36.1 | 0.002281 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.361 | 0.002577 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.375 | 0.001639 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.380 | 0.013245 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.391 | 0.002255 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.395 | 0.014085 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.404 | 0.002604 |
ORF3a | 57 | Q57L | cAG | cTA | 2 | 2 | B.1.448 | 0.005249 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.509 | 0.001732 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.517 | 0.000854 |
ORF3a | 57 | Q57L | cAG | cTT | 2 | 2 | B.1.518 | 0.023529 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.530 | 0.014286 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.537 | 0.04 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.538 | 0.016129 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.555 | 0.044444 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.556 | 0.015038 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.560 | 0.009259 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.595 | 0.000522 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.617.2 | 0.000008 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.627 | 0.00404 |
ORF3a | 57 | Q57Y | CaG | TaT | 2 | 2 | B.1.637 | 0.000146 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.1.70 | 0.04878 |
ORF3a | 57 | Q57Q | caG | caA | 2 | 2 | B.40 | 0.000729 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | B.52 | 0.020202 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | C.36 | 0.001821 |
ORF3a | 57 | Q57X | Cag | Tag | 2 | 2 | D.2 | 0.00015 |
ORF3a | 57 | Q57K | Cag | Aag | 2 | 2 | P.1 | 0.000032 |
ORF3a | 57 | Q57X | Cag | Tag | 2 | 2 | P.1 | 0.000032 |
ORF3a | 57 | Q57L | cAg | cTg | 2 | 2 | P.1 | 0.000032 |
ORF3a | 57 | Q57R | cAg | cGg | 2 | 2 | P.1.13 | 0.001797 |
ORF3a | 57 | Q57H | caG | caT | 2 | 2 | P.1.16 | 0.000748 |
ORF3a | 57 | Q57H | caG | caC | 2 | 2 | P.1.4 | 0.001953 |
ORF3a | 57 | Q57S | CAg | TCg | 1 | 1 | 0.055556 | |
ORF3a | 57 | Q57E | Cag | Gag | 1 | 1 | A | 0.000387 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | A.2.2 | 0.001689 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | AB.1 | 0.008197 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AD.2 | 0.000219 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AF.1 | 0.037037 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | AH.3 | 0.003802 |
ORF3a | 57 | Q57del2 | CAG | --N | 1 | 1 | All | 0 |
ORF3a | 57 | Q57G | CAG | GGA | 1 | 1 | All | 0 |
ORF3a | 57 | Q57S | CAg | TCg | 1 | 1 | All | 0 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AP.1 | 0.001502 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AT.1 | 0.005128 |
ORF3a | 57 | Q57L | CAg | TTg | 1 | 1 | AY.100 | 0.000046 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | AY.100 | 0.000046 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.101 | 0.00049 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.101 | 0.00049 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.102 | 0.000027 |
ORF3a | 57 | Q57L | cAG | cTA | 1 | 1 | AY.102 | 0.000027 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | AY.103 | 0.000006 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.103 | 0.000006 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.105 | 0.000643 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.107 | 0.000466 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.109 | 0.00074 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.110 | 0.000113 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | AY.111 | 0.000183 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.115 | 0.005208 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.117 | 0.000085 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.119 | 0.000035 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | AY.120 | 0.000037 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.120.2 | 0.001285 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | AY.120.2 | 0.001285 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.121 | 0.000135 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.14 | 0.000088 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.16 | 0.00038 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.16 | 0.00038 |
ORF3a | 57 | Q57W | CAg | TGg | 1 | 1 | AY.16.1 | 0.00047 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | AY.20 | 0.000039 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.20 | 0.000039 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | AY.23 | 0.00007 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.24 | 0.000431 |
ORF3a | 57 | Q57E | Cag | Gag | 1 | 1 | AY.25 | 0.000006 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.26 | 0.000028 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.26 | 0.000028 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.28 | 0.00189 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.29 | 0.000016 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | AY.29 | 0.000016 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.3 | 0.00001 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | AY.3 | 0.00001 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.33 | 0.000067 |
ORF3a | 57 | Q57E | Cag | Gag | 1 | 1 | AY.36 | 0.000148 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | AY.39 | 0.000025 |
ORF3a | 57 | Q57L | cAG | cTA | 1 | 1 | AY.39 | 0.000025 |
ORF3a | 57 | Q57K | Cag | Aag | 1 | 1 | AY.39 | 0.000025 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.39.2 | 0.001541 |
ORF3a | 57 | Q57K | Cag | Aag | 1 | 1 | AY.4 | 0.000002 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.4.4 | 0.000409 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.4.5 | 0.000107 |
ORF3a | 57 | Q57L | cAG | cTA | 1 | 1 | AY.42 | 0.00004 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | AY.43 | 0.000004 |
ORF3a | 57 | Q57E | Cag | Gag | 1 | 1 | AY.43 | 0.000004 |
ORF3a | 57 | Q57Y | CaG | TaC | 1 | 1 | AY.43 | 0.000004 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.43 | 0.000004 |
ORF3a | 57 | Q57E | Cag | Gag | 1 | 1 | AY.44 | 0.000006 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | AY.44 | 0.000006 |
ORF3a | 57 | Q57K | Cag | Aag | 1 | 1 | AY.46 | 0.000104 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.46.2 | 0.000635 |
ORF3a | 57 | Q57X | CAG | TGA | 1 | 1 | AY.46.2 | 0.000635 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.46.6 | 0.000072 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 1 | AY.48 | 0.000465 |
ORF3a | 57 | Q57K | Cag | Aag | 1 | 1 | AY.5 | 0.000021 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | AY.5 | 0.000021 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.5 | 0.000021 |
ORF3a | 57 | Q57K | Cag | Aag | 1 | 1 | AY.50 | 0.000799 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.53 | 0.000288 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.56 | 0.001605 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.59 | 0.00053 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | AY.6 | 0.000041 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 1 | AY.6 | 0.000041 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.61 | 0.000105 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.66 | 0.00107 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.7.1 | 0.000113 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 1 | AY.70 | 0.000209 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | AY.73 | 0.000665 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | AY.74 | 0.000116 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | AY.75 | 0.000056 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.82 | 0.001357 |
ORF3a | 57 | Q57K | Cag | Aag | 1 | 1 | AY.88 | 0.000884 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | AY.9 | 0.000068 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.9 | 0.000068 |
ORF3a | 57 | Q57E | Cag | Gag | 1 | 1 | AY.9.1 | 0.000084 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | AY.9.2 | 0.000037 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.90 | 0.000684 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.91 | 0.00073 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.91 | 0.00073 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.92 | 0.000287 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.93 | 0.000273 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | AY.94 | 0.000443 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | AY.96 | 0.002075 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | AY.96 | 0.002075 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | AY.99 | 0.001049 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | AY.99.1 | 0.001553 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B | 0.000128 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 1 | B.1 | 0.000009 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 1 | B.1.1 | 0.000018 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.1 | 0.000018 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.123 | 0.017857 |
ORF3a | 57 | Q57G | CAG | GGA | 1 | 1 | B.1.1.139 | 0.022727 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.148 | 0.008772 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.153 | 0.001095 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.170 | 0.001247 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | B.1.1.174 | 0.003378 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.177 | 0.019231 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.186 | 0.003436 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.1.192 | 0.002309 |
ORF3a | 57 | Q57D | CaG | GaT | 1 | 1 | B.1.1.210 | 0.005714 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.227 | 0.004348 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | B.1.1.228 | 0.003049 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.230 | 0.009174 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.244 | 0.015385 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.251 | 0.007937 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.255 | 0.00303 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.265 | 0.003155 |
ORF3a | 57 | Q57K | Cag | Aag | 1 | 1 | B.1.1.28 | 0.000311 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF3a | 57 | Q57K | Cag | Aag | 1 | 1 | B.1.1.284 | 0.000107 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.291 | 0.000742 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.301 | 0.001179 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.303 | 0.002762 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.305 | 0.003861 |
ORF3a | 57 | Q57L | cAG | cTA | 1 | 1 | B.1.1.306 | 0.000438 |
ORF3a | 57 | Q57del2 | CAG | --N | 1 | 1 | B.1.1.306 | 0.000438 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.309 | 0.005848 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.31 | 0.066667 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.329 | 0.003846 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.334 | 0.016393 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.337 | 0.003597 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.34 | 0.013158 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.350 | 0.04 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.354 | 0.004386 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.356 | 0.008547 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.370 | 0.012658 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.375 | 0.011905 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.389 | 0.006061 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | B.1.1.409 | 0.002833 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | B.1.1.409 | 0.002833 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | B.1.1.417 | 0.002703 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.437 | 0.010417 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | B.1.1.440 | 0.011765 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.45 | 0.014085 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.450 | 0.034483 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.47 | 0.005348 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.480 | 0.025 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.5 | 0.008333 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | B.1.1.516 | 0.066667 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.518 | 0.006329 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.1.519 | 0.00004 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.523 | 0.001563 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.524 | 0.020833 |
ORF3a | 57 | Q57D | CaG | GaT | 1 | 1 | B.1.1.526 | 0.003546 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | B.1.1.59 | 0.006494 |
ORF3a | 57 | Q57del1 | Cag | -ag | 1 | 1 | B.1.1.7 | 0.000001 |
ORF3a | 57 | Q57W | CAg | TGg | 1 | 1 | B.1.1.7 | 0.000001 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 1 | B.1.1.70 | 0.000341 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.83 | 0.00271 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.1.99 | 0.02381 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.1.99 | 0.02381 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.110.3 | 0.000718 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.127 | 0.002198 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.128 | 0.000635 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.160.14 | 0.002119 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.160.7 | 0.002079 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.169 | 0.014925 |
ORF3a | 57 | Q57E | Cag | Gag | 1 | 1 | B.1.177 | 0.000013 |
ORF3a | 57 | Q57N | CaG | AaT | 1 | 1 | B.1.177 | 0.000013 |
ORF3a | 57 | Q57L | CAg | TTg | 1 | 1 | B.1.177 | 0.000013 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | B.1.177 | 0.000013 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.11 | 0.001698 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.16 | 0.000664 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.17 | 0.000821 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.32 | 0.00135 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.177.43 | 0.001477 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.177.44 | 0.000519 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.5 | 0.001242 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.54 | 0.000606 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | B.1.177.57 | 0.000281 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | B.1.177.6 | 0.000977 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.66 | 0.041667 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | B.1.177.73 | 0.000566 |
ORF3a | 57 | Q57E | Cag | Gag | 1 | 1 | B.1.177.73 | 0.000566 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.77 | 0.000726 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.83 | 0.001481 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | B.1.177.85 | 0.005435 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.177.87 | 0.000728 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.178 | 0.02381 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.187 | 0.033333 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.194 | 0.04 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | B.1.2 | 0.000009 |
ORF3a | 57 | Q57K | Cag | Aag | 1 | 1 | B.1.2 | 0.000009 |
ORF3a | 57 | Q57D | CaG | GaT | 1 | 1 | B.1.2 | 0.000009 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | B.1.210 | 0.002132 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.215 | 0.009615 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.218 | 0.005155 |
ORF3a | 57 | Q57R | cAg | cGg | 1 | 1 | B.1.221 | 0.000071 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.227 | 0.047619 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.242 | 0.018868 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.243 | 0.00007 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.258 | 0.000067 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | B.1.258 | 0.000067 |
ORF3a | 57 | Q57Y | CaG | TaC | 1 | 1 | B.1.258 | 0.000067 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.258.3 | 0.001675 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.258.4 | 0.003448 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.260 | 0.003344 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.264.1 | 0.047619 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.265 | 0.001271 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.293 | 0.0125 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.349 | 0.000715 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | B.1.351 | 0.00003 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.351.5 | 0.0006 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.36 | 0.000146 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.36.2 | 0.010753 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.36.20 | 0.016949 |
ORF3a | 57 | Q57N | CaG | AaT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.36.8 | 0.001 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.362 | 0.001541 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.367 | 0.000792 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 1 | B.1.369 | 0.000285 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.369 | 0.000285 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | B.1.375 | 0.00082 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.381 | 0.007812 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.382 | 0.008929 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 1 | B.1.400 | 0.000429 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.400.1 | 0.015152 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.403 | 0.003268 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.407 | 0.035714 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.408 | 0.00369 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.415 | 0.014286 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.426 | 0.001009 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.428 | 0.00102 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 1 | B.1.429 | 0.000024 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.438.1 | 0.000107 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.441 | 0.009615 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 1 | B.1.459 | 0.004082 |
ORF3a | 57 | Q57R | cAG | cGT | 1 | 1 | B.1.466.2 | 0.000391 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.470 | 0.001404 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.471 | 0.002732 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.538 | 0.008065 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.540 | 0.009709 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.540 | 0.009709 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.542 | 0.03125 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.543 | 0.01 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.548 | 0.035714 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.551 | 0.00129 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.558 | 0.004566 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.564 | 0.000426 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.577 | 0.000687 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.580 | 0.004065 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.588 | 0.00091 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | B.1.596 | 0.000087 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | B.1.600 | 0.005848 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.610 | 0.003546 |
ORF3a | 57 | Q57del1 | caG | ca- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF3a | 57 | Q57E | Cag | Gag | 1 | 1 | B.1.617.2 | 0.000004 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF3a | 57 | Q57Y | CaG | TaT | 1 | 1 | B.1.625 | 0.002353 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.631 | 0.003367 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.634 | 0.003425 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | B.1.638 | 0.052632 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.67 | 0.043478 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.1.93 | 0.000934 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | B.29 | 0.003509 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.31 | 0.003731 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.37 | 0.028571 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.4 | 0.002208 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | B.40 | 0.000364 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | B.40 | 0.000364 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | B.40 | 0.000364 |
ORF3a | 57 | Q57H | caG | caC | 1 | 1 | B.56 | 0.028571 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | C.1 | 0.002392 |
ORF3a | 57 | Q57L | cAg | cTg | 1 | 1 | C.36 | 0.000911 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | C.36.3.1 | 0.002717 |
ORF3a | 57 | Q57E | Cag | Gag | 1 | 1 | C.37 | 0.000116 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | C.37 | 0.000116 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | C.37.1 | 0.002618 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | K.1 | 0.02381 |
ORF3a | 57 | Q57del1 | Cag | -ag | 1 | 1 | P.1 | 0.000016 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | P.1.10.1 | 0.00813 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | P.1.13 | 0.000898 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | P.1.14 | 0.000048 |
ORF3a | 57 | Q57del | CAG | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | P.1.17 | 0.000162 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | P.1.6 | 0.001946 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | P.2 | 0.000187 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | P.3 | 0.001595 |
ORF3a | 57 | Q57H | caG | caT | 1 | 1 | P.7 | 0.004367 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | Q.2 | 0.000613 |
ORF3a | 57 | Q57del1 | Cag | -ag | 1 | 1 | Q.4 | 0.000455 |
ORF3a | 57 | Q57X | Cag | Tag | 1 | 1 | Q.7 | 0.001111 |
ORF3a | 57 | Q57Q | caG | caA | 1 | 1 | Q.8 | 0.000165 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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