CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 53 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a53L53LsynctTctA10287000.68093425549-25551

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a53L53LctTctA7001028All0.000134
ORF3a53L53LctTctA347357B.1.617.20.001307
ORF3a53L53LctTctA8485AY.1020.002227
ORF3a53L53LctTctA5359AY.430.000235
ORF3a53L53LctTctA4547AY.390.001112
ORF3a53L53LctTctA4546B.1.4290.001059
ORF3a53L53LctTctA1845B.1.1.70.000016
ORF3a53L53LctTctA830AY.40.000012
ORF3a53L53LctTctA130AY.540.000095
ORF3a53L53LctTctA529B.10.000046
ORF3a53L53LctTctA2525AY.1200.000929
ORF3a53L53LctTctA1822AY.1030.000112
ORF3a53L53LctTctA814AY.440.000049
ORF3a53L53LctTctA1010B.1.1.1700.012469
ORF3a53L53LctTctA16AY.30.00001
ORF3a53L53LctTctA25AY.250.000012
ORF3a53L53LctTctA55AY.98.10.000242
ORF3a53L53LctTctA15B.1.1770.000013
ORF3a53L53LctTctA24AY.50.000041
ORF3a53L53LctTctA24B.1.20.000018
ORF3a53L53LctTctA12AY.1000.000046
ORF3a53L53LctTctA22AY.1170.000169
ORF3a53L53LctTctA22AY.350.000466
ORF3a53L53LctTctA22AY.460.000208
ORF3a53L53LctTctA11AY.1190.000035
ORF3a53L53LctTctA11AY.1210.000135
ORF3a53L53LctTctA11AY.230.00007
ORF3a53L53LctTctA11AY.450.000122
ORF3a53L53LctTctA11AY.46.20.000635
ORF3a53L53LctTctA11AY.580.000907
ORF3a53L53LctTctA11AY.610.000105
ORF3a53L53LctTctA11AY.740.000116
ORF3a53L53LctTctA11AY.960.002075
ORF3a53L53LctTctA11AY.980.000079
ORF3a53L53LctTctA11B.1.1.5190.00004
ORF3a53L53LctTctA11B.1.1.830.00271
ORF3a53L53LctTctA11B.1.6210.000089