CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 52

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a52L52FnonsynCttTtt61706170125546-25548
ORF3a52L52LsynctTctG6162950.47889625546-25548
ORF3a52L52LsynctTctC6162550.41396125546-25548
ORF3a52L52LsynctTctA616660.10714325546-25548
ORF3a52L52InonsynCttAtt2792770.99283225546-25548
ORF3a52L52InonsynCtTAtC27920.0071684625546-25548
ORF3a52L52PnonsyncTtcCt1631600.98159525546-25548
ORF3a52L52PnonsyncTTcCA16330.018404925546-25548
ORF3a52L52deldelCTT---129129125546-25548
ORF3a52L52del1delcTtc-t8383125546-25548
ORF3a52L52VnonsynCttGtt4444125546-25548
ORF3a52L52HnonsyncTtcAt32280.87525546-25548
ORF3a52L52HnonsyncTTcAC3240.12525546-25548
ORF3a52L52del2delcTTc--13110.84615425546-25548
ORF3a52L52del2delCTT--N1310.076923125546-25548
ORF3a52L52del2delCTt--t1310.076923125546-25548
ORF3a52L52RnonsyncTtcGt44125546-25548
ORF3a52L52NnonsynCTtAAt420.525546-25548
ORF3a52L52NnonsynCTTAAC420.525546-25548

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a52L52FCttTtt61706170All0.00118
ORF3a52L52FCttTtt14981498B.1.3510.04453
ORF3a52L52FCttTtt10411041AY.40.00162
ORF3a52L52FCttTtt813813B.1.1.70.000728
ORF3a52L52LctTctG295616All0.000056
ORF3a52L52LctTctC255616All0.000049
ORF3a52L52LctTctA66616All0.000013
ORF3a52L52FCttTtt412412AY.330.027513
ORF3a52L52ICttAtt277279All0.000053
ORF3a52L52ICtTAtC2279All0
ORF3a52L52LctTctG269270B.1.20.002369
ORF3a52L52LctTctA1270B.1.20.000009
ORF3a52L52FCttTtt212212B.1.362.21
ORF3a52L52PcTtcCt160163All0.000031
ORF3a52L52PcTTcCA3163All0.000001
ORF3a52L52FCttTtt151151AY.390.003731
ORF3a52L52FCttTtt146146B.1.617.20.00055
ORF3a52L52delCTT---129129All0.000025
ORF3a52L52FCttTtt125125AY.430.000554
ORF3a52L52FCttTtt103103AY.1030.00064
ORF3a52L52del1cTtc-t8383All0.000016
ORF3a52L52FCttTtt8282AY.440.000499
ORF3a52L52FCttTtt8080B.1.20.000704
ORF3a52L52FCttTtt7777AY.850.032892
ORF3a52L52LctTctC6572B.1.1.70.000058
ORF3a52L52LctTctG572B.1.1.70.000004
ORF3a52L52LctTctA272B.1.1.70.000002
ORF3a52L52FCttTtt7171B.1.1770.000935
ORF3a52L52FCttTtt6969B.10.000632
ORF3a52L52del1cTtc-t6767B.1.1.70.00006
ORF3a52L52FCttTtt6666B.1.4290.001553
ORF3a52L52FCttTtt5959AY.250.000355
ORF3a52L52LctTctA5558AY.4.20.001193
ORF3a52L52LctTctC358AY.4.20.000065
ORF3a52L52ICttAtt4848B.1.10.000871
ORF3a52L52ICttAtt4646B.1.1.70.000041
ORF3a52L52FCttTtt4545B.1.4270.002272
ORF3a52L52VCttGtt4444All0.000008
ORF3a52L52FCttTtt4141AY.60.001686
ORF3a52L52ICttAtt4141B.1.1.4340.014291
ORF3a52L52PcTtcCt4141B.1.177.40.008653
ORF3a52L52FCttTtt4141B.1.4780.482353
ORF3a52L52FCttTtt3838B.1.5900.172727
ORF3a52L52FCttTtt3737B.1.10.000671
ORF3a52L52FCttTtt3636AY.1190.001271
ORF3a52L52PcTtcCt3535AY.940.015494
ORF3a52L52FCttTtt3434AY.1020.000901
ORF3a52L52HcTtcAt2832All0.000005
ORF3a52L52HcTTcAC432All0.000001
ORF3a52L52LctTctC3232B.1.438.10.003432
ORF3a52L52FCttTtt3232B.1.5260.000752
ORF3a52L52FCttTtt2929AY.710.013777
ORF3a52L52FCttTtt2727AY.30.000269
ORF3a52L52FCttTtt2323AY.1000.001058
ORF3a52L52FCttTtt2323AY.99.20.00212
ORF3a52L52FCttTtt2323P.10.000362
ORF3a52L52FCttTtt2222AY.39.10.000871
ORF3a52L52FCttTtt2121B.1.564.10.033123
ORF3a52L52delCTT---2020AY.40.000031
ORF3a52L52LctTctC2020AY.470.000622
ORF3a52L52FCttTtt1919B.1.1.2160.016919
ORF3a52L52FCttTtt1919B.6.60.016889
ORF3a52L52FCttTtt1818B.1.1.5190.000715
ORF3a52L52FCttTtt1818B.1.416.10.028125
ORF3a52L52LctTctC1617AY.250.000096
ORF3a52L52LctTctG117AY.250.000006
ORF3a52L52ICttAtt1717AY.430.000075
ORF3a52L52PcTtcCt1717B.1.2580.001131
ORF3a52L52HcTtcAt1717B.1.5720.425
ORF3a52L52FCttTtt1616AY.420.000644
ORF3a52L52FCttTtt1515A.2.5.20.023585
ORF3a52L52delCTT---1515B.1.1.70.000013
ORF3a52L52ICttAtt1414AY.1030.000087
ORF3a52L52FCttTtt1414AY.50.000289
ORF3a52L52FCttTtt1414B.1.6210.001239
ORF3a52L52FCttTtt1414P.1.170.002265
ORF3a52L52del2cTTc--1113All0.000002
ORF3a52L52del2CTT--N113All0
ORF3a52L52del2CTt--t113All0
ORF3a52L52LctTctG613B.10.000055
ORF3a52L52LctTctC513B.10.000046
ORF3a52L52LctTctA213B.10.000018
ORF3a52L52VCttGtt1313B.1.1.70.000012
ORF3a52L52FCttTtt1313B.1.1600.000405
ORF3a52L52FCttTtt1313B.1.6340.044521
ORF3a52L52FCttTtt1212AY.290.000189
ORF3a52L52ICttAtt1212B.10.00011
ORF3a52L52LctTctC1212B.1.3240.019262
ORF3a52L52FCttTtt1212B.1.3770.054795
ORF3a52L52LctTctC712B.1.617.20.000026
ORF3a52L52LctTctG312B.1.617.20.000011
ORF3a52L52LctTctA212B.1.617.20.000008
ORF3a52L52FCttTtt1111AY.160.004176
ORF3a52L52ICttAtt1111AY.250.000066
ORF3a52L52FCttTtt1111AY.9.20.000404
ORF3a52L52LctTctC1011B.1.177.330.016447
ORF3a52L52LctTctA111B.1.177.330.001645
ORF3a52L52FCttTtt1010AY.240.00431
ORF3a52L52delCTT---1010AY.30.000099
ORF3a52L52FCttTtt1010P.1.150.002323
ORF3a52L52FCttTtt88AD.20.001752
ORF3a52L52LctTctC88AY.40.000012
ORF3a52L52ICttAtt88AY.40.000012
ORF3a52L52delCTT---88AY.430.000035
ORF3a52L52delCTT---88AY.440.000049
ORF3a52L52FCttTtt88AY.470.000249
ORF3a52L52FCttTtt88AY.540.000763
ORF3a52L52FCttTtt88B.1.4990.008403
ORF3a52L52FCttTtt88B.1.617.10.001032
ORF3a52L52ICttAtt88B.1.617.20.00003
ORF3a52L52PcTtcCt77AY.40.000011
ORF3a52L52FCttTtt77AY.4.50.000752
ORF3a52L52PcTtcCt77B.1.1.70.000006
ORF3a52L52FCttTtt77B.1.2580.000466
ORF3a52L52FCttTtt77B.1.258.240.075269
ORF3a52L52FCttTtt77B.1.5240.009845
ORF3a52L52FCttTtt77B.400.00255
ORF3a52L52ICttAtt77B.60.006369
ORF3a52L52LctTctC260.111111
ORF3a52L52LctTctA260.111111
ORF3a52L52LctTctG260.111111
ORF3a52L52ICttAtt66AY.1190.000212
ORF3a52L52FCttTtt66AY.1200.000223
ORF3a52L52FCttTtt66AY.260.00017
ORF3a52L52LctTctC66AY.420.000241
ORF3a52L52ICttAtt66AY.440.000037
ORF3a52L52FCttTtt66AY.980.000474
ORF3a52L52FCttTtt66AY.990.006296
ORF3a52L52PcTtcCt66B.10.000055
ORF3a52L52FCttTtt66B.1.110.30.00431
ORF3a52L52FCttTtt66B.1.1110.007051
ORF3a52L52FCttTtt66B.1.36.290.003104
ORF3a52L52FCttTtt66B.1.466.20.002347
ORF3a52L52PcTtcCt66B.1.617.20.000023
ORF3a52L52LctTctC66P.1.140.000287
ORF3a52L52FCttTtt66P.20.00112
ORF3a52L52FCttTtt66Q.80.000989
ORF3a52L52ICttAtt55AY.1020.000133
ORF3a52L52FCttTtt55AY.1060.001674
ORF3a52L52PcTtcCt55AY.250.00003
ORF3a52L52FCttTtt55AY.270.000324
ORF3a52L52ICttAtt55AY.4.20.000108
ORF3a52L52FCttTtt55AY.4.20.000108
ORF3a52L52VCttGtt55AY.680.001369
ORF3a52L52PcTtcCt55B.1.10.000091
ORF3a52L52FCttTtt55B.1.2210.000355
ORF3a52L52FCttTtt55B.1.2370.024876
ORF3a52L52FCttTtt55B.1.2430.000348
ORF3a52L52FCttTtt55B.1.3560.008636
ORF3a52L52FCttTtt55B.1.3610.006443
ORF3a52L52VCttGtt55B.1.5770.003436
ORF3a52L52FCttTtt55C.160.005302
ORF3a52L52FCttTtt55D.20.000375
ORF3a52L52FCttTtt55P.1.140.000239
ORF3a52L52PcTTcCA240.111111
ORF3a52L52HcTtcAt240.111111
ORF3a52L52NCTTAAC240.111111
ORF3a52L52PcTtcCt240.111111
ORF3a52L52HcTTcAC240.111111
ORF3a52L52ICttAtt240.111111
ORF3a52L52ICtTAtC240.111111
ORF3a52L52NCTtAAt240.111111
ORF3a52L52RcTtcGt44All0.000001
ORF3a52L52NCTtAAt24All0
ORF3a52L52NCTTAAC24All0
ORF3a52L52LctTctG34AY.1020.00008
ORF3a52L52LctTctC14AY.1020.000027
ORF3a52L52FCttTtt44AY.1210.000541
ORF3a52L52FCttTtt44AY.360.000593
ORF3a52L52VCttGtt44AY.390.000099
ORF3a52L52delCTT---44AY.4.50.00043
ORF3a52L52PcTtcCt44AY.440.000024
ORF3a52L52LctTctC34AY.440.000018
ORF3a52L52LctTctG14AY.440.000006
ORF3a52L52FCttTtt44AY.610.000419
ORF3a52L52FCttTtt44AY.770.00451
ORF3a52L52FCttTtt44AY.98.10.000194
ORF3a52L52FCttTtt44B.1.1.3060.001754
ORF3a52L52LctTctC24B.1.1.5190.000079
ORF3a52L52LctTctG24B.1.1.5190.000079
ORF3a52L52FCttTtt44B.1.1.630.001543
ORF3a52L52delCTT---44B.1.1770.000053
ORF3a52L52FCttTtt44B.1.177.560.00267
ORF3a52L52FCttTtt44B.1.177.810.000757
ORF3a52L52FCttTtt44B.1.4700.005618
ORF3a52L52delCTT---44B.1.617.20.000015
ORF3a52L52FCttTtt44P.1.100.001078
ORF3a52L52FCttTtt44Q.30.00058
ORF3a52L52FCttTtt33A.2.5.10.014423
ORF3a52L52PcTtcCt33AY.1000.000138
ORF3a52L52LctTctC33AY.1030.000019
ORF3a52L52PcTtcCt33AY.1030.000019
ORF3a52L52FCttTtt33AY.1170.000254
ORF3a52L52FCttTtt33AY.1180.000188
ORF3a52L52ICttAtt33AY.230.000209
ORF3a52L52FCttTtt33AY.29.10.000662
ORF3a52L52FCttTtt33AY.370.000948
ORF3a52L52del2cTTc--33AY.40.000005
ORF3a52L52LctTctC33AY.4.40.001227
ORF3a52L52FCttTtt33AY.550.002752
ORF3a52L52del2cTTc--33AY.580.002722
ORF3a52L52FCttTtt33AY.640.001786
ORF3a52L52FCttTtt33AY.70.000588
ORF3a52L52FCttTtt33AY.900.002053
ORF3a52L52PcTtcCt33AY.98.10.000145
ORF3a52L52delCTT---33B.1.10.000054
ORF3a52L52FCttTtt33B.1.1.2140.000166
ORF3a52L52FCttTtt33B.1.1.2570.029126
ORF3a52L52FCttTtt33B.1.1.3010.003538
ORF3a52L52FCttTtt33B.1.1.3280.050847
ORF3a52L52FCttTtt33B.1.1.3890.018182
ORF3a52L52FCttTtt33B.1.1.540.009063
ORF3a52L52LctTctC33B.1.1600.000094
ORF3a52L52ICttAtt33B.1.1770.00004
ORF3a52L52LctTctC33B.1.177.440.001557
ORF3a52L52FCttTtt33B.1.177.530.007177
ORF3a52L52FCttTtt33B.1.177.80.002257
ORF3a52L52del1cTtc-t33B.1.177.820.001432
ORF3a52L52PcTtcCt23B.1.20.000018
ORF3a52L52PcTTcCA13B.1.20.000009
ORF3a52L52FCttTtt33B.1.258.170.000312
ORF3a52L52del1cTtc-t33B.1.3510.000089
ORF3a52L52FCttTtt33B.1.360.000438
ORF3a52L52FCttTtt33B.1.5950.000783
ORF3a52L52del2cTTc--33B.1.617.20.000011
ORF3a52L52FCttTtt33C.370.000348
ORF3a52L52FCttTtt22A0.000774
ORF3a52L52FCttTtt22A.2.50.000998
ORF3a52L52VCttGtt22AY.1020.000053
ORF3a52L52delCTT---22AY.1030.000012
ORF3a52L52HcTtcAt22AY.1030.000012
ORF3a52L52delCTT---22AY.1130.000285
ORF3a52L52FCttTtt22AY.1130.000285
ORF3a52L52LctTctC22AY.1190.000071
ORF3a52L52FCttTtt22AY.200.000078
ORF3a52L52FCttTtt22AY.230.000139
ORF3a52L52delCTT---22AY.250.000012
ORF3a52L52ICttAtt22AY.290.000032
ORF3a52L52LctTctC22AY.30.00002
ORF3a52L52PcTtcCt22AY.30.00002
ORF3a52L52ICttAtt22AY.3.10.000171
ORF3a52L52FCttTtt22AY.3.10.000171
ORF3a52L52FCttTtt22AY.34.10.00102
ORF3a52L52delCTT---22AY.39.10.000079
ORF3a52L52FCttTtt22AY.4.2.10.000298
ORF3a52L52FCttTtt22AY.460.000208
ORF3a52L52delCTT---22AY.46.20.001271
ORF3a52L52delCTT---22AY.50.000041
ORF3a52L52del1cTtc-t22AY.520.001629
ORF3a52L52FCttTtt22AY.660.002139
ORF3a52L52FCttTtt22AY.690.000373
ORF3a52L52FCttTtt22AY.700.000417
ORF3a52L52FCttTtt22AY.740.000231
ORF3a52L52delCTT---22AY.810.003984
ORF3a52L52FCttTtt22AY.820.002714
ORF3a52L52ICttAtt22AY.840.000875
ORF3a52L52FCttTtt22AY.9.10.000167
ORF3a52L52PcTtcCt22AY.99.20.000184
ORF3a52L52VCttGtt22B.10.000018
ORF3a52L52HcTtcAt22B.10.000018
ORF3a52L52FCttTtt22B.1.1.2220.000408
ORF3a52L52FCttTtt22B.1.1.3040.005618
ORF3a52L52FCttTtt22B.1.1.3160.00185
ORF3a52L52PcTtcCt22B.1.1.4820.046512
ORF3a52L52FCttTtt22B.1.1.5170.013605
ORF3a52L52del2cTTc--12B.1.1.70.000001
ORF3a52L52del2CTT--N12B.1.1.70.000001
ORF3a52L52FCttTtt22B.1.1460.008475
ORF3a52L52del1cTtc-t22B.1.1600.000062
ORF3a52L52PcTtcCt22B.1.1770.000026
ORF3a52L52FCttTtt22B.1.177.730.001133
ORF3a52L52FCttTtt22B.1.177.860.000367
ORF3a52L52delCTT---22B.1.2410.001623
ORF3a52L52FCttTtt22B.1.258.140.001961
ORF3a52L52LctTctC22B.1.3510.000059
ORF3a52L52FCttTtt22B.1.351.50.001199
ORF3a52L52LctTctC22B.1.360.000292
ORF3a52L52FCttTtt22B.1.36.80.002
ORF3a52L52FCttTtt22B.1.3620.003082
ORF3a52L52LctTctC22B.1.4250.005988
ORF3a52L52FCttTtt22B.1.4320.022472
ORF3a52L52FCttTtt22B.1.5170.000854
ORF3a52L52FCttTtt22B.1.5440.012048
ORF3a52L52ICttAtt22B.1.5760.001813
ORF3a52L52FCttTtt22B.1.5960.000174
ORF3a52L52LctTctG22B.1.5960.000174
ORF3a52L52VCttGtt22B.1.617.20.000008
ORF3a52L52FCttTtt22B.1.617.30.00597
ORF3a52L52LctTctC22B.1.6200.001892
ORF3a52L52del1cTtc-t22B.1.6270.00404
ORF3a52L52VCttGtt22B.1.6370.000146
ORF3a52L52LctTctC22B.400.000729
ORF3a52L52ICttAtt22C.350.001548
ORF3a52L52delCTT---22P.10.000032
ORF3a52L52LctTctC12P.10.000016
ORF3a52L52LctTctG12P.10.000016
ORF3a52L52FCttTtt22P.1.120.000968
ORF3a52L52ICttAtt22P.1.140.000096
ORF3a52L52FCttTtt22R.10.00018
ORF3a52L52delCTT---22U.30.007722
ORF3a52L52ICttAtt11A.10.000282
ORF3a52L52LctTctC11A.2.20.001689
ORF3a52L52FCttTtt11AD.10.004115
ORF3a52L52delCTT---11AH.30.003802
ORF3a52L52HcTTcAC11AU.10.001266
ORF3a52L52FCttTtt11AY.10.000396
ORF3a52L52ICttAtt11AY.1000.000046
ORF3a52L52FCttTtt11AY.1010.00049
ORF3a52L52HcTtcAt11AY.1020.000027
ORF3a52L52VCttGtt11AY.1030.000006
ORF3a52L52FCttTtt11AY.1050.000643
ORF3a52L52delCTT---11AY.1050.000643
ORF3a52L52FCttTtt11AY.1070.000466
ORF3a52L52delCTT---11AY.1070.000466
ORF3a52L52FCttTtt11AY.1100.000113
ORF3a52L52FCttTtt11AY.1110.000183
ORF3a52L52delCTT---11AY.1110.000183
ORF3a52L52LctTctC11AY.1130.000142
ORF3a52L52PcTtcCt11AY.1130.000142
ORF3a52L52delCTT---11AY.1140.000231
ORF3a52L52FCttTtt11AY.1140.000231
ORF3a52L52FCttTtt11AY.1160.000287
ORF3a52L52ICttAtt11AY.1170.000085
ORF3a52L52delCTT---11AY.1190.000035
ORF3a52L52LctTctC11AY.1200.000037
ORF3a52L52delCTT---11AY.1200.000037
ORF3a52L52FCttTtt11AY.120.20.001285
ORF3a52L52LctTctC11AY.1210.000135
ORF3a52L52FCttTtt11AY.130.000161
ORF3a52L52delCTT---11AY.140.000088
ORF3a52L52FCttTtt11AY.140.000088
ORF3a52L52FCttTtt11AY.16.10.00047
ORF3a52L52FCttTtt11AY.190.00114
ORF3a52L52ICttAtt11AY.200.000039
ORF3a52L52LctTctC11AY.210.001898
ORF3a52L52delCTT---11AY.230.00007
ORF3a52L52LctTctC11AY.230.00007
ORF3a52L52HcTtcAt11AY.250.000006
ORF3a52L52FCttTtt11AY.280.00189
ORF3a52L52LctTctC11AY.290.000016
ORF3a52L52delCTT---11AY.29.10.000221
ORF3a52L52ICttAtt11AY.30.00001
ORF3a52L52delCTT---11AY.300.000396
ORF3a52L52VCttGtt11AY.300.000396
ORF3a52L52FCttTtt11AY.320.000532
ORF3a52L52LctTctC11AY.330.000067
ORF3a52L52ICttAtt11AY.340.000097
ORF3a52L52LctTctC11AY.350.000233
ORF3a52L52ICttAtt11AY.390.000025
ORF3a52L52LctTctC11AY.390.000025
ORF3a52L52delCTT---11AY.390.000025
ORF3a52L52PcTtcCt11AY.390.000025
ORF3a52L52VCttGtt11AY.40.000002
ORF3a52L52delCTT---11AY.4.20.000022
ORF3a52L52FCttTtt11AY.4.40.000409
ORF3a52L52PcTtcCt11AY.420.00004
ORF3a52L52ICttAtt11AY.420.00004
ORF3a52L52LctTctC11AY.430.000004
ORF3a52L52RcTtcGt11AY.430.000004
ORF3a52L52HcTTcAC11AY.440.000006
ORF3a52L52del2cTTc--11AY.440.000006
ORF3a52L52ICttAtt11AY.450.000122
ORF3a52L52FCttTtt11AY.450.000122
ORF3a52L52LctTctC11AY.450.000122
ORF3a52L52LctTctC11AY.460.000104
ORF3a52L52LctTctC11AY.46.40.000165
ORF3a52L52VCttGtt11AY.470.000031
ORF3a52L52delCTT---11AY.470.000031
ORF3a52L52ICttAtt11AY.480.000465
ORF3a52L52LctTctC11AY.50.000021
ORF3a52L52FCttTtt11AY.5.30.000337
ORF3a52L52FCttTtt11AY.5.40.000277
ORF3a52L52FCttTtt11AY.500.000799
ORF3a52L52FCttTtt11AY.530.000288
ORF3a52L52ICttAtt11AY.550.000917
ORF3a52L52FCttTtt11AY.580.000907
ORF3a52L52LctTctC11AY.590.00053
ORF3a52L52LctTctC11AY.610.000105
ORF3a52L52HcTtcAt11AY.680.000274
ORF3a52L52FCttTtt11AY.720.001361
ORF3a52L52FCttTtt11AY.750.000056
ORF3a52L52FCttTtt11AY.75.10.00018
ORF3a52L52LctTctC11AY.770.001127
ORF3a52L52FCttTtt11AY.840.000437
ORF3a52L52ICttAtt11AY.860.00083
ORF3a52L52FCttTtt11AY.860.00083
ORF3a52L52FCttTtt11AY.90.000068
ORF3a52L52delCTT---11AY.90.000068
ORF3a52L52delCTT---11AY.9.20.000037
ORF3a52L52VCttGtt11AY.9.20.000037
ORF3a52L52FCttTtt11AY.930.000273
ORF3a52L52LctTctC11AY.98.10.000048
ORF3a52L52delCTT---11AY.98.10.000048
ORF3a52L52delCTT---11AY.990.001049
ORF3a52L52delCTT---11AY.99.20.000092
ORF3a52L52delCTT---11B0.000128
ORF3a52L52FCttTtt11B0.000128
ORF3a52L52delCTT---11B.10.000009
ORF3a52L52del1cTtc-t11B.10.000009
ORF3a52L52RcTtcGt11B.1.10.000018
ORF3a52L52FCttTtt11B.1.1.10.000327
ORF3a52L52FCttTtt11B.1.1.1010.01
ORF3a52L52delCTT---11B.1.1.1390.022727
ORF3a52L52FCttTtt11B.1.1.1410.002012
ORF3a52L52ICttAtt11B.1.1.1590.004673
ORF3a52L52FCttTtt11B.1.1.1610.003534
ORF3a52L52LctTctC11B.1.1.1760.000439
ORF3a52L52HcTtcAt11B.1.1.1940.00495
ORF3a52L52FCttTtt11B.1.1.280.000311
ORF3a52L52LctTctA11B.1.1.2840.000107
ORF3a52L52ICttAtt11B.1.1.2910.000742
ORF3a52L52RcTtcGt11B.1.1.3060.000438
ORF3a52L52FCttTtt11B.1.1.3170.000412
ORF3a52L52LctTctC11B.1.1.3180.000302
ORF3a52L52FCttTtt11B.1.1.3180.000302
ORF3a52L52FCttTtt11B.1.1.3190.017544
ORF3a52L52LctTctC11B.1.1.3220.008772
ORF3a52L52FCttTtt11B.1.1.3260.001761
ORF3a52L52FCttTtt11B.1.1.330.000421
ORF3a52L52LctTctC11B.1.1.3460.029412
ORF3a52L52FCttTtt11B.1.1.3530.020833
ORF3a52L52FCttTtt11B.1.1.3960.045455
ORF3a52L52FCttTtt11B.1.1.3980.003226
ORF3a52L52FCttTtt11B.1.1.4090.002833
ORF3a52L52delCTT---11B.1.1.4090.002833
ORF3a52L52FCttTtt11B.1.1.4320.001266
ORF3a52L52ICttAtt11B.1.1.4460.076923
ORF3a52L52FCttTtt11B.1.1.4480.002033
ORF3a52L52FCttTtt11B.1.1.4860.001577
ORF3a52L52delCTT---11B.1.1.500.000679
ORF3a52L52FCttTtt11B.1.1.570.011494
ORF3a52L52LctTctC11B.1.1.630.000386
ORF3a52L52FCttTtt11B.1.1.710.006061
ORF3a52L52ICttAtt11B.1.1.980.018519
ORF3a52L52FCttTtt11B.1.1030.019231
ORF3a52L52FCttTtt11B.1.160.250.011111
ORF3a52L52delCTT---11B.1.160.330.004425
ORF3a52L52FCttTtt11B.1.160.70.002079
ORF3a52L52LctTctC11B.1.1770.000013
ORF3a52L52del2CTt--t11B.1.1770.000013
ORF3a52L52FCttTtt11B.1.177.120.000152
ORF3a52L52FCttTtt11B.1.177.150.000631
ORF3a52L52FCttTtt11B.1.177.180.00116
ORF3a52L52delCTT---11B.1.177.60.000977
ORF3a52L52del1cTtc-t11B.1.177.60.000977
ORF3a52L52LctTctC11B.1.177.600.000218
ORF3a52L52ICttAtt11B.1.177.70.000165
ORF3a52L52FCttTtt11B.1.177.820.000477
ORF3a52L52FCttTtt11B.1.1890.004292
ORF3a52L52PcTtcCt11B.1.2210.000071
ORF3a52L52delCTT---11B.1.221.10.002907
ORF3a52L52FCttTtt11B.1.2220.001692
ORF3a52L52FCttTtt11B.1.2320.000537
ORF3a52L52FCttTtt11B.1.2340.000132
ORF3a52L52FCttTtt11B.1.2400.000216
ORF3a52L52LctTctC11B.1.2430.00007
ORF3a52L52PcTtcCt11B.1.2430.00007
ORF3a52L52LctTctC11B.1.2580.000067
ORF3a52L52FCttTtt11B.1.3110.000275
ORF3a52L52FCttTtt11B.1.3360.002439
ORF3a52L52delCTT---11B.1.3510.00003
ORF3a52L52HcTtcAt11B.1.360.000146
ORF3a52L52ICttAtt11B.1.360.000146
ORF3a52L52del1cTtc-t11B.1.36.10.00114
ORF3a52L52FCttTtt11B.1.36.10.00114
ORF3a52L52RcTtcGt11B.1.36.170.000494
ORF3a52L52FCttTtt11B.1.36.180.00042
ORF3a52L52FCttTtt11B.1.3670.000792
ORF3a52L52FCttTtt11B.1.3690.000285
ORF3a52L52FCttTtt11B.1.3890.001002
ORF3a52L52delCTT---11B.1.4220.000812
ORF3a52L52FCttTtt11B.1.4230.010204
ORF3a52L52ICttAtt11B.1.4290.000024
ORF3a52L52VCttGtt11B.1.4290.000024
ORF3a52L52LctTctC11B.1.4560.003268
ORF3a52L52FCttTtt11B.1.4680.005714
ORF3a52L52FCttTtt11B.1.5250.000113
ORF3a52L52FCttTtt11B.1.5600.00463
ORF3a52L52FCttTtt11B.1.5610.000397
ORF3a52L52FCttTtt11B.1.5760.000907
ORF3a52L52FCttTtt11B.1.5770.000687
ORF3a52L52FCttTtt11B.1.5820.000491
ORF3a52L52FCttTtt11B.1.5870.001898
ORF3a52L52PcTtcCt11B.1.617.10.000129
ORF3a52L52VCttGtt11B.1.617.10.000129
ORF3a52L52ICttAtt11B.1.617.10.000129
ORF3a52L52delCTT---11B.1.6380.052632
ORF3a52L52FCttTtt11B.290.003509
ORF3a52L52LctTctC11C.20.016129
ORF3a52L52FCttTtt11C.230.005814
ORF3a52L52FCttTtt11C.360.000911
ORF3a52L52FCttTtt11C.36.30.000567
ORF3a52L52VCttGtt11C.370.000116
ORF3a52L52FCttTtt11C.40.01
ORF3a52L52delCTT---11D.20.000075
ORF3a52L52VCttGtt11P.10.000016
ORF3a52L52ICttAtt11P.10.000016
ORF3a52L52FCttTtt11P.1.130.000898
ORF3a52L52delCTT---11P.1.140.000048
ORF3a52L52ICttAtt11P.1.150.000232
ORF3a52L52delCTT---11P.1.150.000232
ORF3a52L52FCttTtt11P.40.003802
ORF3a52L52ICttAtt11Q.10.000126
ORF3a52L52del1cTtc-t11R.10.00009
ORF3a52L52FCttTtt11W.20.004831
ORF3a52L52FCttTtt11Z.10.00289