CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF3a | 44 | G44R | nonsyn | Gga | Aga | 2708 | 2323 | 0.857829 | 25522-25524 | |
ORF3a | 44 | G44R | nonsyn | Gga | Cga | 2708 | 385 | 0.142171 | 25522-25524 | |
ORF3a | 44 | G44V | nonsyn | gGa | gTa | 1438 | 1438 | 1 | 25522-25524 | |
ORF3a | 44 | G44G | syn | ggA | ggG | 1005 | 633 | 0.629851 | 25522-25524 | |
ORF3a | 44 | G44G | syn | ggA | ggC | 1005 | 287 | 0.285572 | 25522-25524 | |
ORF3a | 44 | G44G | syn | ggA | ggT | 1005 | 85 | 0.0845771 | 25522-25524 | |
ORF3a | 44 | G44del | del | GGA | --- | 904 | 904 | 1 | 25522-25524 | |
ORF3a | 44 | G44E | nonsyn | gGa | gAa | 843 | 843 | 1 | 25522-25524 | |
ORF3a | 44 | G44X | nonsyn | Gga | Tga | 33 | 33 | 1 | 25522-25524 | |
ORF3a | 44 | G44A | nonsyn | gGa | gCa | 27 | 26 | 0.962963 | 25522-25524 | |
ORF3a | 44 | G44A | nonsyn | gGA | gCG | 27 | 1 | 0.037037 | 25522-25524 | |
ORF3a | 44 | G44L | nonsyn | GGa | TTa | 22 | 22 | 1 | 25522-25524 | |
ORF3a | 44 | G44Q | nonsyn | GGa | CAa | 4 | 4 | 1 | 25522-25524 | |
ORF3a | 44 | G44W | nonsyn | GgA | TgG | 4 | 4 | 1 | 25522-25524 | |
ORF3a | 44 | G44K | nonsyn | GGa | AAa | 3 | 3 | 1 | 25522-25524 | |
ORF3a | 44 | G44del1 | del | Gga | -ga | 2 | 2 | 1 | 25522-25524 | |
ORF3a | 44 | G44del2 | del | GGA | --N | 2 | 1 | 0.5 | 25522-25524 | |
ORF3a | 44 | G44del2 | del | gGA | g-- | 2 | 1 | 0.5 | 25522-25524 | |
ORF3a | 44 | G44C | nonsyn | GgA | TgC | 1 | 1 | 1 | 25522-25524 | |
ORF3a | 44 | G44S | nonsyn | GGa | TCa | 1 | 1 | 1 | 25522-25524 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF3a | 44 | G44R | Gga | Aga | 2323 | 2708 | All | 0.000444 |
ORF3a | 44 | G44R | Gga | Cga | 385 | 2708 | All | 0.000074 |
ORF3a | 44 | G44V | gGa | gTa | 1438 | 1438 | All | 0.000275 |
ORF3a | 44 | G44G | ggA | ggG | 633 | 1005 | All | 0.000121 |
ORF3a | 44 | G44G | ggA | ggC | 287 | 1005 | All | 0.000055 |
ORF3a | 44 | G44G | ggA | ggT | 85 | 1005 | All | 0.000016 |
ORF3a | 44 | G44del | GGA | --- | 904 | 904 | All | 0.000173 |
ORF3a | 44 | G44E | gGa | gAa | 843 | 843 | All | 0.000161 |
ORF3a | 44 | G44R | Gga | Aga | 749 | 767 | B.1.1.7 | 0.000671 |
ORF3a | 44 | G44R | Gga | Cga | 18 | 767 | B.1.1.7 | 0.000016 |
ORF3a | 44 | G44R | Gga | Aga | 328 | 328 | B.1.1 | 0.00595 |
ORF3a | 44 | G44E | gGa | gAa | 242 | 242 | B.1.111 | 0.284371 |
ORF3a | 44 | G44G | ggA | ggG | 186 | 220 | B.1.1.7 | 0.000167 |
ORF3a | 44 | G44G | ggA | ggC | 29 | 220 | B.1.1.7 | 0.000026 |
ORF3a | 44 | G44G | ggA | ggT | 5 | 220 | B.1.1.7 | 0.000004 |
ORF3a | 44 | G44R | Gga | Cga | 213 | 217 | AY.120 | 0.007919 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 217 | AY.120 | 0.000149 |
ORF3a | 44 | G44V | gGa | gTa | 215 | 215 | B.1.426 | 0.216953 |
ORF3a | 44 | G44E | gGa | gAa | 202 | 202 | B.1.1.7 | 0.000181 |
ORF3a | 44 | G44R | Gga | Aga | 189 | 194 | AY.4 | 0.000294 |
ORF3a | 44 | G44R | Gga | Cga | 5 | 194 | AY.4 | 0.000008 |
ORF3a | 44 | G44del | GGA | --- | 193 | 193 | AY.26 | 0.005464 |
ORF3a | 44 | G44G | ggA | ggC | 164 | 165 | B.1.1.519 | 0.006513 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 165 | B.1.1.519 | 0.00004 |
ORF3a | 44 | G44R | Gga | Aga | 158 | 158 | P.2 | 0.029489 |
ORF3a | 44 | G44del | GGA | --- | 153 | 153 | B.1.630 | 0.801047 |
ORF3a | 44 | G44V | gGa | gTa | 126 | 126 | B.1.1.7 | 0.000113 |
ORF3a | 44 | G44V | gGa | gTa | 115 | 115 | B.1.2 | 0.001013 |
ORF3a | 44 | G44R | Gga | Aga | 103 | 106 | B.1.2 | 0.000907 |
ORF3a | 44 | G44R | Gga | Cga | 3 | 106 | B.1.2 | 0.000026 |
ORF3a | 44 | G44V | gGa | gTa | 100 | 100 | AY.5 | 0.002065 |
ORF3a | 44 | G44del | GGA | --- | 78 | 78 | AY.75 | 0.00437 |
ORF3a | 44 | G44R | Gga | Aga | 75 | 75 | P.1 | 0.001182 |
ORF3a | 44 | G44E | gGa | gAa | 72 | 72 | B.1.1 | 0.001306 |
ORF3a | 44 | G44V | gGa | gTa | 71 | 71 | AY.103 | 0.000441 |
ORF3a | 44 | G44V | gGa | gTa | 70 | 70 | AY.4 | 0.000109 |
ORF3a | 44 | G44R | Gga | Aga | 48 | 66 | AY.44 | 0.000292 |
ORF3a | 44 | G44R | Gga | Cga | 18 | 66 | AY.44 | 0.00011 |
ORF3a | 44 | G44G | ggA | ggG | 40 | 60 | B.1.617.2 | 0.000151 |
ORF3a | 44 | G44G | ggA | ggT | 13 | 60 | B.1.617.2 | 0.000049 |
ORF3a | 44 | G44G | ggA | ggC | 7 | 60 | B.1.617.2 | 0.000026 |
ORF3a | 44 | G44V | gGa | gTa | 58 | 58 | B.1.617.2 | 0.000218 |
ORF3a | 44 | G44R | Gga | Aga | 54 | 55 | AY.3 | 0.000537 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 55 | AY.3 | 0.00001 |
ORF3a | 44 | G44R | Gga | Aga | 47 | 53 | B.1.617.2 | 0.000177 |
ORF3a | 44 | G44R | Gga | Cga | 6 | 53 | B.1.617.2 | 0.000023 |
ORF3a | 44 | G44G | ggA | ggG | 27 | 50 | AY.25 | 0.000162 |
ORF3a | 44 | G44G | ggA | ggC | 23 | 50 | AY.25 | 0.000138 |
ORF3a | 44 | G44del | GGA | --- | 47 | 47 | AY.43 | 0.000208 |
ORF3a | 44 | G44del | GGA | --- | 43 | 43 | AY.4 | 0.000067 |
ORF3a | 44 | G44R | Gga | Cga | 42 | 43 | B.1.258 | 0.002795 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 43 | B.1.258 | 0.000067 |
ORF3a | 44 | G44G | ggA | ggG | 33 | 40 | AY.103 | 0.000205 |
ORF3a | 44 | G44G | ggA | ggT | 5 | 40 | AY.103 | 0.000031 |
ORF3a | 44 | G44G | ggA | ggC | 2 | 40 | AY.103 | 0.000012 |
ORF3a | 44 | G44R | Gga | Aga | 39 | 39 | AY.103 | 0.000242 |
ORF3a | 44 | G44E | gGa | gAa | 38 | 38 | AY.4 | 0.000059 |
ORF3a | 44 | G44G | ggA | ggG | 28 | 38 | B.1 | 0.000256 |
ORF3a | 44 | G44G | ggA | ggT | 8 | 38 | B.1 | 0.000073 |
ORF3a | 44 | G44G | ggA | ggC | 2 | 38 | B.1 | 0.000018 |
ORF3a | 44 | G44del | GGA | --- | 37 | 37 | B.1.1.7 | 0.000033 |
ORF3a | 44 | G44G | ggA | ggG | 31 | 36 | AY.4 | 0.000048 |
ORF3a | 44 | G44G | ggA | ggC | 3 | 36 | AY.4 | 0.000005 |
ORF3a | 44 | G44G | ggA | ggT | 2 | 36 | AY.4 | 0.000003 |
ORF3a | 44 | G44E | gGa | gAa | 36 | 36 | AY.4.2 | 0.000781 |
ORF3a | 44 | G44del | GGA | --- | 35 | 35 | B.1.177 | 0.000461 |
ORF3a | 44 | G44R | Gga | Aga | 33 | 34 | AY.25 | 0.000198 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 34 | AY.25 | 0.000006 |
ORF3a | 44 | G44X | Gga | Tga | 33 | 33 | All | 0.000006 |
ORF3a | 44 | G44G | ggA | ggG | 33 | 33 | B.1.243 | 0.002296 |
ORF3a | 44 | G44E | gGa | gAa | 32 | 32 | B.1.177 | 0.000421 |
ORF3a | 44 | G44R | Gga | Cga | 24 | 32 | B.1.177 | 0.000316 |
ORF3a | 44 | G44R | Gga | Aga | 8 | 32 | B.1.177 | 0.000105 |
ORF3a | 44 | G44V | gGa | gTa | 31 | 31 | AY.43 | 0.000137 |
ORF3a | 44 | G44V | gGa | gTa | 31 | 31 | B.1.38 | 1 |
ORF3a | 44 | G44V | gGa | gTa | 30 | 30 | P.1.14 | 0.001434 |
ORF3a | 44 | G44V | gGa | gTa | 29 | 29 | AY.102 | 0.000769 |
ORF3a | 44 | G44G | ggA | ggG | 29 | 29 | AY.120 | 0.001078 |
ORF3a | 44 | G44del | GGA | --- | 29 | 29 | AY.25 | 0.000174 |
ORF3a | 44 | G44V | gGa | gTa | 29 | 29 | B.1 | 0.000266 |
ORF3a | 44 | G44R | Gga | Aga | 28 | 29 | B.1 | 0.000256 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 29 | B.1 | 0.000009 |
ORF3a | 44 | G44V | gGa | gTa | 29 | 29 | P.1 | 0.000457 |
ORF3a | 44 | G44A | gGa | gCa | 26 | 27 | All | 0.000005 |
ORF3a | 44 | G44A | gGA | gCG | 1 | 27 | All | 0 |
ORF3a | 44 | G44V | gGa | gTa | 27 | 27 | B.1.115 | 0.586957 |
ORF3a | 44 | G44R | Gga | Aga | 25 | 25 | A.29 | 0.132979 |
ORF3a | 44 | G44G | ggA | ggG | 17 | 25 | B.1.2 | 0.00015 |
ORF3a | 44 | G44G | ggA | ggC | 7 | 25 | B.1.2 | 0.000062 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 25 | B.1.2 | 0.000009 |
ORF3a | 44 | G44V | gGa | gTa | 24 | 24 | AY.1 | 0.009497 |
ORF3a | 44 | G44V | gGa | gTa | 24 | 24 | AY.44 | 0.000146 |
ORF3a | 44 | G44del | GGA | --- | 24 | 24 | B.1.1 | 0.000435 |
ORF3a | 44 | G44E | gGa | gAa | 23 | 23 | AY.103 | 0.000143 |
ORF3a | 44 | G44V | gGa | gTa | 23 | 23 | AY.3 | 0.000229 |
ORF3a | 44 | G44L | GGa | TTa | 22 | 22 | All | 0.000004 |
ORF3a | 44 | G44G | ggA | ggT | 13 | 21 | AY.102 | 0.000345 |
ORF3a | 44 | G44G | ggA | ggG | 7 | 21 | AY.102 | 0.000186 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 21 | AY.102 | 0.000027 |
ORF3a | 44 | G44del | GGA | --- | 21 | 21 | B.1.526 | 0.000494 |
ORF3a | 44 | G44E | gGa | gAa | 20 | 20 | AY.5 | 0.000413 |
ORF3a | 44 | G44R | Gga | Aga | 20 | 20 | B.1.429 | 0.000471 |
ORF3a | 44 | G44G | ggA | ggG | 18 | 19 | B.1.429 | 0.000424 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 19 | B.1.429 | 0.000024 |
ORF3a | 44 | G44R | Gga | Aga | 18 | 18 | AY.3.1 | 0.001535 |
ORF3a | 44 | G44R | Gga | Aga | 18 | 18 | B.1.146 | 0.076271 |
ORF3a | 44 | G44R | Gga | Aga | 18 | 18 | B.1.427 | 0.000909 |
ORF3a | 44 | G44V | gGa | gTa | 17 | 17 | AY.29 | 0.000268 |
ORF3a | 44 | G44del | GGA | --- | 17 | 17 | AY.3 | 0.000169 |
ORF3a | 44 | G44R | Gga | Aga | 15 | 17 | AY.43 | 0.000066 |
ORF3a | 44 | G44R | Gga | Cga | 2 | 17 | AY.43 | 0.000009 |
ORF3a | 44 | G44del | GGA | --- | 17 | 17 | B.1.617.2 | 0.000064 |
ORF3a | 44 | G44G | ggA | ggG | 11 | 17 | P.1 | 0.000173 |
ORF3a | 44 | G44G | ggA | ggT | 3 | 17 | P.1 | 0.000047 |
ORF3a | 44 | G44G | ggA | ggC | 3 | 17 | P.1 | 0.000047 |
ORF3a | 44 | G44V | gGa | gTa | 16 | 16 | B.1.497 | 0.005036 |
ORF3a | 44 | G44G | ggA | ggG | 9 | 15 | AY.43 | 0.00004 |
ORF3a | 44 | G44G | ggA | ggC | 6 | 15 | AY.43 | 0.000027 |
ORF3a | 44 | G44E | gGa | gAa | 15 | 15 | B.1 | 0.000137 |
ORF3a | 44 | G44R | Gga | Aga | 14 | 14 | AY.100 | 0.000644 |
ORF3a | 44 | G44R | Gga | Cga | 10 | 14 | AY.5 | 0.000206 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 14 | AY.5 | 0.000083 |
ORF3a | 44 | G44V | gGa | gTa | 14 | 14 | B.1.1 | 0.000254 |
ORF3a | 44 | G44V | gGa | gTa | 14 | 14 | B.1.1.253 | 0.035088 |
ORF3a | 44 | G44V | gGa | gTa | 13 | 13 | AY.25 | 0.000078 |
ORF3a | 44 | G44R | Gga | Aga | 7 | 13 | AY.47 | 0.000218 |
ORF3a | 44 | G44R | Gga | Cga | 6 | 13 | AY.47 | 0.000187 |
ORF3a | 44 | G44E | gGa | gAa | 13 | 13 | B.1.2 | 0.000114 |
ORF3a | 44 | G44G | ggA | ggG | 13 | 13 | P.1.15 | 0.00302 |
ORF3a | 44 | G44R | Gga | Aga | 12 | 12 | AY.29 | 0.000189 |
ORF3a | 44 | G44V | gGa | gTa | 12 | 12 | B.1.160 | 0.000374 |
ORF3a | 44 | G44R | Gga | Aga | 12 | 12 | B.1.478 | 0.141176 |
ORF3a | 44 | G44G | ggA | ggG | 6 | 11 | AY.100 | 0.000276 |
ORF3a | 44 | G44G | ggA | ggT | 5 | 11 | AY.100 | 0.00023 |
ORF3a | 44 | G44V | gGa | gTa | 11 | 11 | B.1.1.519 | 0.000437 |
ORF3a | 44 | G44V | gGa | gTa | 11 | 11 | B.1.177 | 0.000145 |
ORF3a | 44 | G44del | GGA | --- | 10 | 10 | AY.103 | 0.000062 |
ORF3a | 44 | G44R | Gga | Aga | 10 | 10 | AY.23 | 0.000697 |
ORF3a | 44 | G44V | gGa | gTa | 10 | 10 | AY.34 | 0.00097 |
ORF3a | 44 | G44del | GGA | --- | 10 | 10 | AY.44 | 0.000061 |
ORF3a | 44 | G44R | Gga | Aga | 10 | 10 | AY.99.2 | 0.000922 |
ORF3a | 44 | G44G | ggA | ggC | 8 | 10 | B.1.177 | 0.000105 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 10 | B.1.177 | 0.000013 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 10 | B.1.177 | 0.000013 |
ORF3a | 44 | G44V | gGa | gTa | 10 | 10 | B.1.221 | 0.00071 |
ORF3a | 44 | G44G | ggA | ggC | 9 | 10 | B.1.240 | 0.00194 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 10 | B.1.240 | 0.000216 |
ORF3a | 44 | G44E | gGa | gAa | 10 | 10 | B.1.617.2 | 0.000038 |
ORF3a | 44 | G44E | gGa | gAa | 9 | 9 | AA.1 | 0.065217 |
ORF3a | 44 | G44V | gGa | gTa | 9 | 9 | AY.114 | 0.00208 |
ORF3a | 44 | G44R | Gga | Aga | 9 | 9 | AY.33 | 0.000601 |
ORF3a | 44 | G44R | Gga | Aga | 9 | 9 | AY.34 | 0.000873 |
ORF3a | 44 | G44X | Gga | Tga | 9 | 9 | AY.4 | 0.000014 |
ORF3a | 44 | G44R | Gga | Cga | 7 | 9 | AY.54 | 0.000667 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 9 | AY.54 | 0.000191 |
ORF3a | 44 | G44A | gGa | gCa | 8 | 9 | B.1.1 | 0.000145 |
ORF3a | 44 | G44A | gGA | gCG | 1 | 9 | B.1.1 | 0.000018 |
ORF3a | 44 | G44V | gGa | gTa | 9 | 9 | B.1.1.214 | 0.000499 |
ORF3a | 44 | G44del | GGA | --- | 9 | 9 | B.1.1.274 | 0.045455 |
ORF3a | 44 | G44del | GGA | --- | 9 | 9 | B.1.258 | 0.000599 |
ORF3a | 44 | G44R | Gga | Aga | 9 | 9 | B.1.466.2 | 0.003521 |
ORF3a | 44 | G44E | gGa | gAa | 9 | 9 | B.1.575 | 0.002731 |
ORF3a | 44 | G44R | Gga | Aga | 7 | 8 | AY.102 | 0.000186 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 8 | AY.102 | 0.000027 |
ORF3a | 44 | G44G | ggA | ggG | 8 | 8 | AY.118 | 0.000501 |
ORF3a | 44 | G44del | GGA | --- | 8 | 8 | AY.39 | 0.000198 |
ORF3a | 44 | G44V | gGa | gTa | 8 | 8 | AY.46 | 0.000833 |
ORF3a | 44 | G44R | Gga | Aga | 8 | 8 | AY.63 | 0.003095 |
ORF3a | 44 | G44R | Gga | Aga | 8 | 8 | AY.69 | 0.001493 |
ORF3a | 44 | G44R | Gga | Aga | 8 | 8 | B.1.1.374 | 0.019002 |
ORF3a | 44 | G44L | GGa | TTa | 8 | 8 | B.1.1.7 | 0.000007 |
ORF3a | 44 | G44E | gGa | gAa | 8 | 8 | B.1.441 | 0.076923 |
ORF3a | 44 | G44R | Gga | Aga | 8 | 8 | N.6 | 0.056738 |
ORF3a | 44 | G44E | gGa | gAa | 8 | 8 | Q.1 | 0.001011 |
ORF3a | 44 | G44G | ggA | ggG | 7 | 7 | AY.29 | 0.00011 |
ORF3a | 44 | G44G | ggA | ggG | 3 | 7 | AY.3 | 0.00003 |
ORF3a | 44 | G44G | ggA | ggC | 2 | 7 | AY.3 | 0.00002 |
ORF3a | 44 | G44G | ggA | ggT | 2 | 7 | AY.3 | 0.00002 |
ORF3a | 44 | G44G | ggA | ggG | 5 | 7 | AY.39 | 0.000124 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 7 | AY.39 | 0.000025 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 7 | AY.39 | 0.000025 |
ORF3a | 44 | G44V | gGa | gTa | 7 | 7 | AY.4.2 | 0.000152 |
ORF3a | 44 | G44E | gGa | gAa | 7 | 7 | AY.61 | 0.000733 |
ORF3a | 44 | G44V | gGa | gTa | 7 | 7 | AY.99 | 0.007345 |
ORF3a | 44 | G44del | GGA | --- | 7 | 7 | B.1 | 0.000064 |
ORF3a | 44 | G44G | ggA | ggG | 4 | 7 | B.1.1 | 0.000073 |
ORF3a | 44 | G44G | ggA | ggC | 3 | 7 | B.1.1 | 0.000054 |
ORF3a | 44 | G44R | Gga | Aga | 7 | 7 | B.1.1.225 | 0.05036 |
ORF3a | 44 | G44R | Gga | Aga | 7 | 7 | B.1.1.265 | 0.022082 |
ORF3a | 44 | G44V | gGa | gTa | 7 | 7 | B.1.1.311 | 0.002507 |
ORF3a | 44 | G44R | Gga | Aga | 7 | 7 | B.1.160 | 0.000218 |
ORF3a | 44 | G44V | gGa | gTa | 7 | 7 | B.1.525 | 0.000792 |
ORF3a | 44 | G44R | Gga | Aga | 7 | 7 | B.1.551 | 0.009032 |
ORF3a | 44 | G44V | gGa | gTa | 6 | 6 | AY.121 | 0.000812 |
ORF3a | 44 | G44G | ggA | ggG | 6 | 6 | AY.23 | 0.000418 |
ORF3a | 44 | G44R | Gga | Cga | 4 | 6 | AY.4.2 | 0.000087 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 6 | AY.4.2 | 0.000043 |
ORF3a | 44 | G44G | ggA | ggG | 4 | 6 | AY.44 | 0.000024 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 6 | AY.44 | 0.000006 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 6 | AY.44 | 0.000006 |
ORF3a | 44 | G44V | gGa | gTa | 6 | 6 | AY.46.6 | 0.000433 |
ORF3a | 44 | G44del | GGA | --- | 6 | 6 | AY.5 | 0.000124 |
ORF3a | 44 | G44V | gGa | gTa | 6 | 6 | AY.74 | 0.000694 |
ORF3a | 44 | G44V | gGa | gTa | 6 | 6 | B.1.1.209 | 0.053571 |
ORF3a | 44 | G44V | gGa | gTa | 6 | 6 | B.1.1.39 | 0.003058 |
ORF3a | 44 | G44V | gGa | gTa | 6 | 6 | B.1.110.3 | 0.00431 |
ORF3a | 44 | G44del | GGA | --- | 6 | 6 | B.1.160 | 0.000187 |
ORF3a | 44 | G44G | ggA | ggG | 6 | 6 | B.1.526 | 0.000141 |
ORF3a | 44 | G44V | gGa | gTa | 5 | 5 | AY.100 | 0.00023 |
ORF3a | 44 | G44E | gGa | gAa | 5 | 5 | AY.102 | 0.000133 |
ORF3a | 44 | G44E | gGa | gAa | 5 | 5 | AY.117 | 0.000423 |
ORF3a | 44 | G44V | gGa | gTa | 5 | 5 | AY.119 | 0.000177 |
ORF3a | 44 | G44V | gGa | gTa | 5 | 5 | AY.42 | 0.000201 |
ORF3a | 44 | G44E | gGa | gAa | 5 | 5 | AY.44 | 0.00003 |
ORF3a | 44 | G44G | ggA | ggT | 5 | 5 | AY.46.6 | 0.000361 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 5 | AY.75 | 0.000224 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 5 | AY.75 | 0.000056 |
ORF3a | 44 | G44E | gGa | gAa | 5 | 5 | AY.9.2 | 0.000184 |
ORF3a | 44 | G44V | gGa | gTa | 5 | 5 | B.1.1.284 | 0.000537 |
ORF3a | 44 | G44V | gGa | gTa | 5 | 5 | B.1.258 | 0.000333 |
ORF3a | 44 | G44V | gGa | gTa | 5 | 5 | B.1.416 | 0.006345 |
ORF3a | 44 | G44del | GGA | --- | 5 | 5 | B.1.438.1 | 0.000536 |
ORF3a | 44 | G44R | Gga | Aga | 5 | 5 | B.1.570 | 0.014706 |
ORF3a | 44 | G44G | ggA | ggG | 3 | 5 | B.1.596 | 0.000261 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 5 | B.1.596 | 0.000087 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 5 | B.1.596 | 0.000087 |
ORF3a | 44 | G44R | Gga | Cga | 4 | 4 | 0.222222 | |
ORF3a | 44 | G44V | gGa | gTa | 4 | 4 | A.23.1 | 0.002817 |
ORF3a | 44 | G44W | GgA | TgG | 4 | 4 | All | 0.000001 |
ORF3a | 44 | G44Q | GGa | CAa | 4 | 4 | All | 0.000001 |
ORF3a | 44 | G44V | gGa | gTa | 4 | 4 | AY.111 | 0.000733 |
ORF3a | 44 | G44R | Gga | Cga | 2 | 4 | AY.121 | 0.000271 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 4 | AY.121 | 0.000271 |
ORF3a | 44 | G44G | ggA | ggG | 4 | 4 | AY.20 | 0.000155 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 4 | AY.20 | 0.000155 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 4 | AY.22 | 0.008368 |
ORF3a | 44 | G44del | GGA | --- | 4 | 4 | AY.4.2 | 0.000087 |
ORF3a | 44 | G44V | gGa | gTa | 4 | 4 | AY.45 | 0.000487 |
ORF3a | 44 | G44V | gGa | gTa | 4 | 4 | AY.47 | 0.000124 |
ORF3a | 44 | G44E | gGa | gAa | 4 | 4 | AY.54 | 0.000381 |
ORF3a | 44 | G44V | gGa | gTa | 4 | 4 | AY.75 | 0.000224 |
ORF3a | 44 | G44G | ggA | ggT | 4 | 4 | AY.84 | 0.00175 |
ORF3a | 44 | G44del | GGA | --- | 4 | 4 | AY.9.1 | 0.000335 |
ORF3a | 44 | G44V | gGa | gTa | 4 | 4 | AY.94 | 0.001771 |
ORF3a | 44 | G44V | gGa | gTa | 4 | 4 | AY.98.1 | 0.000194 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 4 | AY.98.1 | 0.000194 |
ORF3a | 44 | G44G | ggA | ggC | 4 | 4 | B.1.1.306 | 0.001754 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 4 | B.1.1.519 | 0.000159 |
ORF3a | 44 | G44E | gGa | gAa | 4 | 4 | B.1.160 | 0.000125 |
ORF3a | 44 | G44R | Gga | Cga | 2 | 4 | B.1.36 | 0.000292 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 4 | B.1.36 | 0.000292 |
ORF3a | 44 | G44G | ggA | ggG | 4 | 4 | B.1.367 | 0.00317 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 4 | B.1.438.4 | 0.085106 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 4 | B.1.525 | 0.000453 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 4 | B.1.621 | 0.000354 |
ORF3a | 44 | G44V | gGa | gTa | 4 | 4 | B.1.627 | 0.008081 |
ORF3a | 44 | G44G | ggA | ggG | 4 | 4 | C.37 | 0.000464 |
ORF3a | 44 | G44X | Gga | Tga | 4 | 4 | P.1.14 | 0.000191 |
ORF3a | 44 | G44G | ggA | ggG | 4 | 4 | P.1.14 | 0.000191 |
ORF3a | 44 | G44del | GGA | --- | 4 | 4 | P.1.9 | 0.019231 |
ORF3a | 44 | G44V | gGa | gTa | 4 | 4 | P.2 | 0.000747 |
ORF3a | 44 | G44R | Gga | Aga | 4 | 4 | Q.8 | 0.00066 |
ORF3a | 44 | G44K | GGa | AAa | 3 | 3 | All | 0.000001 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | AY.107 | 0.001398 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | AY.119 | 0.000106 |
ORF3a | 44 | G44E | gGa | gAa | 3 | 3 | AY.119 | 0.000106 |
ORF3a | 44 | G44E | gGa | gAa | 3 | 3 | AY.3 | 0.00003 |
ORF3a | 44 | G44G | ggA | ggT | 2 | 3 | AY.36 | 0.000296 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 3 | AY.36 | 0.000148 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | AY.39 | 0.000074 |
ORF3a | 44 | G44del | GGA | --- | 3 | 3 | AY.39.1 | 0.000119 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | AY.4.3 | 0.002525 |
ORF3a | 44 | G44del | GGA | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | AY.4.5 | 0.000322 |
ORF3a | 44 | G44del | GGA | --- | 3 | 3 | AY.45 | 0.000365 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 3 | AY.45 | 0.000243 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 3 | AY.45 | 0.000122 |
ORF3a | 44 | G44G | ggA | ggG | 3 | 3 | AY.5 | 0.000062 |
ORF3a | 44 | G44del | GGA | --- | 3 | 3 | AY.74 | 0.000347 |
ORF3a | 44 | G44G | ggA | ggG | 3 | 3 | AY.75 | 0.000168 |
ORF3a | 44 | G44R | Gga | Cga | 2 | 3 | AY.75.1 | 0.000361 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 3 | AY.75.1 | 0.00018 |
ORF3a | 44 | G44G | ggA | ggG | 3 | 3 | AY.77 | 0.003382 |
ORF3a | 44 | G44G | ggA | ggG | 3 | 3 | AY.88 | 0.002653 |
ORF3a | 44 | G44G | ggA | ggG | 3 | 3 | AY.9.1 | 0.000251 |
ORF3a | 44 | G44V | gGa | gTa | 3 | 3 | AY.9.2 | 0.00011 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | AY.9.2 | 0.00011 |
ORF3a | 44 | G44del | GGA | --- | 3 | 3 | AY.98 | 0.000237 |
ORF3a | 44 | G44X | Gga | Tga | 3 | 3 | B.1 | 0.000027 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | B.1.1.133 | 0.025424 |
ORF3a | 44 | G44E | gGa | gAa | 3 | 3 | B.1.1.214 | 0.000166 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | B.1.1.222 | 0.000612 |
ORF3a | 44 | G44E | gGa | gAa | 3 | 3 | B.1.1.318 | 0.000905 |
ORF3a | 44 | G44W | GgA | TgG | 3 | 3 | B.1.1.7 | 0.000003 |
ORF3a | 44 | G44A | gGa | gCa | 3 | 3 | B.1.1.7 | 0.000003 |
ORF3a | 44 | G44del | GGA | --- | 3 | 3 | B.1.160.24 | 0.013274 |
ORF3a | 44 | G44V | gGa | gTa | 3 | 3 | B.1.177.81 | 0.000568 |
ORF3a | 44 | G44G | ggA | ggG | 3 | 3 | B.1.177.81 | 0.000568 |
ORF3a | 44 | G44E | gGa | gAa | 3 | 3 | B.1.240 | 0.000647 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | B.1.258.20 | 0.047619 |
ORF3a | 44 | G44V | gGa | gTa | 3 | 3 | B.1.336 | 0.007317 |
ORF3a | 44 | G44del | GGA | --- | 3 | 3 | B.1.36.17 | 0.001482 |
ORF3a | 44 | G44V | gGa | gTa | 3 | 3 | B.1.427 | 0.000151 |
ORF3a | 44 | G44del | GGA | --- | 3 | 3 | B.1.427 | 0.000151 |
ORF3a | 44 | G44E | gGa | gAa | 3 | 3 | B.1.429 | 0.000071 |
ORF3a | 44 | G44V | gGa | gTa | 3 | 3 | B.1.429 | 0.000071 |
ORF3a | 44 | G44V | gGa | gTa | 3 | 3 | B.1.438.1 | 0.000322 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | B.1.509 | 0.002597 |
ORF3a | 44 | G44E | gGa | gAa | 3 | 3 | B.1.526 | 0.000071 |
ORF3a | 44 | G44V | gGa | gTa | 3 | 3 | B.1.617.1 | 0.000387 |
ORF3a | 44 | G44del | GGA | --- | 3 | 3 | B.1.637 | 0.000219 |
ORF3a | 44 | G44V | gGa | gTa | 3 | 3 | P.1.10 | 0.000808 |
ORF3a | 44 | G44R | Gga | Aga | 3 | 3 | P.1.14 | 0.000143 |
ORF3a | 44 | G44del | GGA | --- | 3 | 3 | U.3 | 0.011583 |
ORF3a | 44 | G44Q | GGa | CAa | 2 | 2 | 0.111111 | |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | AB.1 | 0.016393 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | AE.8 | 0.000978 |
ORF3a | 44 | G44del1 | Gga | -ga | 2 | 2 | All | 0 |
ORF3a | 44 | G44del2 | gGA | g-- | 1 | 2 | All | 0 |
ORF3a | 44 | G44del2 | GGA | --N | 1 | 2 | All | 0 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.100 | 0.000092 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | AY.109 | 0.001479 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.113 | 0.000285 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.118 | 0.000125 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | AY.118 | 0.000125 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.119 | 0.000071 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 2 | AY.119 | 0.000035 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 2 | AY.119 | 0.000035 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | AY.12 | 0.000632 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.120 | 0.000074 |
ORF3a | 44 | G44A | gGa | gCa | 2 | 2 | AY.120 | 0.000074 |
ORF3a | 44 | G44G | ggA | ggT | 2 | 2 | AY.120.2 | 0.002571 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.13 | 0.000322 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | AY.14 | 0.000176 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | AY.14 | 0.000176 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | AY.14 | 0.000176 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | AY.23 | 0.000139 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.23 | 0.000139 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | AY.26 | 0.000057 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | AY.26 | 0.000057 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | AY.28 | 0.003781 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.29 | 0.000032 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | AY.29.1 | 0.000441 |
ORF3a | 44 | G44X | Gga | Tga | 2 | 2 | AY.3 | 0.00002 |
ORF3a | 44 | G44L | GGa | TTa | 2 | 2 | AY.33 | 0.000134 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.33 | 0.000134 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | AY.33 | 0.000134 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.34 | 0.000194 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | AY.36 | 0.000296 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | AY.39.1 | 0.000079 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | AY.4.2 | 0.000043 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | AY.43 | 0.000009 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | AY.46 | 0.000208 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | AY.46 | 0.000208 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.46.2 | 0.001271 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | AY.46.4 | 0.000329 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | AY.48 | 0.00093 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | AY.5.4 | 0.000553 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.54 | 0.000191 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | AY.59 | 0.001059 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.6 | 0.000082 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | AY.61 | 0.00021 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.67 | 0.000929 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | AY.70 | 0.000417 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | AY.81 | 0.003984 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.1.1 | 0.000653 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.1.10 | 0.00223 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.1.161 | 0.007067 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.1.174 | 0.006757 |
ORF3a | 44 | G44G | ggA | ggT | 2 | 2 | B.1.1.214 | 0.000111 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.1.220 | 0.003717 |
ORF3a | 44 | G44R | Gga | Cga | 2 | 2 | B.1.1.348 | 0.001592 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.1.420 | 0.002012 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | B.1.1.432 | 0.002532 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.1.432 | 0.002532 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.1.464 | 0.002946 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.1.50 | 0.001358 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | B.1.1.519 | 0.000079 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.1.519 | 0.000079 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.1.63 | 0.000772 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | B.1.1.63 | 0.000772 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | B.1.160 | 0.000062 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.160.33 | 0.00885 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.177.62 | 0.002384 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.177.82 | 0.000955 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.2 | 0.000018 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.210 | 0.004264 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.221 | 0.000142 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.221 | 0.000142 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.243 | 0.000139 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.243 | 0.000139 |
ORF3a | 44 | G44Q | GGa | CAa | 2 | 2 | B.1.258 | 0.000133 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.258.22 | 0.005333 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.351 | 0.000059 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | B.1.351 | 0.000059 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.351 | 0.000059 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 2 | B.1.351 | 0.00003 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 2 | B.1.351 | 0.00003 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.36.24 | 0.012346 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.36.38 | 0.003284 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.36.8 | 0.002 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | B.1.427 | 0.000101 |
ORF3a | 44 | G44L | GGa | TTa | 2 | 2 | B.1.429 | 0.000047 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.429 | 0.000047 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.469 | 0.00722 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.525 | 0.000226 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.526 | 0.000047 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.537 | 0.04 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.568 | 0.002222 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | B.1.609 | 0.000959 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.621 | 0.000177 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | B.1.621 | 0.000177 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | B.1.621 | 0.000177 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 2 | B.1.621 | 0.000089 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 2 | B.1.621 | 0.000089 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.623 | 0.001073 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | B.1.637 | 0.000146 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | D.2 | 0.00015 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | D.2 | 0.00015 |
ORF3a | 44 | G44R | Gga | Aga | 2 | 2 | N.5 | 0.003534 |
ORF3a | 44 | G44A | gGa | gCa | 2 | 2 | P.1 | 0.000032 |
ORF3a | 44 | G44del | GGA | --- | 2 | 2 | P.1 | 0.000032 |
ORF3a | 44 | G44L | GGa | TTa | 2 | 2 | P.1 | 0.000032 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | P.1.12 | 0.000968 |
ORF3a | 44 | G44A | gGa | gCa | 2 | 2 | P.1.15 | 0.000465 |
ORF3a | 44 | G44E | gGa | gAa | 2 | 2 | P.1.16 | 0.000748 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 2 | P.1.7 | 0.000319 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 2 | P.1.7 | 0.000319 |
ORF3a | 44 | G44G | ggA | ggG | 2 | 2 | P.2 | 0.000373 |
ORF3a | 44 | G44V | gGa | gTa | 2 | 2 | Q.8 | 0.00033 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | A.2.3 | 0.004739 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 1 | A.2.5 | 0.000499 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | A.2.5.2 | 0.001572 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | A.27 | 0.001656 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | A.28 | 0.002646 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 1 | AD.2 | 0.000219 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AH.3 | 0.003802 |
ORF3a | 44 | G44S | GGa | TCa | 1 | 1 | All | 0 |
ORF3a | 44 | G44C | GgA | TgC | 1 | 1 | All | 0 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.10 | 0.00053 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | AY.10 | 0.00053 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | AY.101 | 0.00049 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.102 | 0.000027 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.105 | 0.000643 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 1 | AY.106 | 0.000335 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.107 | 0.000466 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | AY.108 | 0.001103 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.110 | 0.000113 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 1 | AY.110 | 0.000113 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.110 | 0.000113 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.111 | 0.000183 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | AY.113 | 0.000142 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.114 | 0.000231 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | AY.116.1 | 0.000311 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | AY.116.1 | 0.000311 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.117 | 0.000085 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | AY.118 | 0.000063 |
ORF3a | 44 | G44del2 | GGA | --N | 1 | 1 | AY.120 | 0.000037 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.120 | 0.000037 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 1 | AY.120.2 | 0.001285 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.14 | 0.000088 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | AY.16 | 0.00038 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.16 | 0.00038 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.16.1 | 0.00047 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.19 | 0.00114 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.2 | 0.000356 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.20 | 0.000039 |
ORF3a | 44 | G44L | GGa | TTa | 1 | 1 | AY.20 | 0.000039 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.24 | 0.000431 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | AY.25 | 0.000006 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | AY.26 | 0.000028 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.27 | 0.000065 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 1 | AY.27 | 0.000065 |
ORF3a | 44 | G44L | GGa | TTa | 1 | 1 | AY.27 | 0.000065 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.27 | 0.000065 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | AY.29 | 0.000016 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.29.1 | 0.000221 |
ORF3a | 44 | G44W | GgA | TgG | 1 | 1 | AY.3 | 0.00001 |
ORF3a | 44 | G44L | GGa | TTa | 1 | 1 | AY.3 | 0.00001 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.3.1 | 0.000085 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.3.1 | 0.000085 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.33 | 0.000067 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.34 | 0.000097 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.34.1 | 0.00051 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.34.1 | 0.00051 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.36 | 0.000148 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | AY.39 | 0.000025 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | AY.39.1 | 0.00004 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.39.1 | 0.00004 |
ORF3a | 44 | G44A | gGa | gCa | 1 | 1 | AY.4 | 0.000002 |
ORF3a | 44 | G44del1 | Gga | -ga | 1 | 1 | AY.4 | 0.000002 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | AY.4.2 | 0.000022 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF3a | 44 | G44del2 | gGA | g-- | 1 | 1 | AY.4.5 | 0.000107 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | AY.42 | 0.00004 |
ORF3a | 44 | G44A | gGa | gCa | 1 | 1 | AY.42 | 0.00004 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.42 | 0.00004 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | AY.43 | 0.000004 |
ORF3a | 44 | G44del1 | Gga | -ga | 1 | 1 | AY.44 | 0.000006 |
ORF3a | 44 | G44C | GgA | TgC | 1 | 1 | AY.44 | 0.000006 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | AY.46.2 | 0.000635 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.46.4 | 0.000165 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | AY.46.4 | 0.000165 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 1 | AY.46.6 | 0.000072 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.47 | 0.000031 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.5.2 | 0.002463 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.52 | 0.000814 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.59 | 0.00053 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | AY.59 | 0.00053 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.59 | 0.00053 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 1 | AY.6 | 0.000041 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 1 | AY.60 | 0.000938 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.65 | 0.000533 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.68 | 0.000274 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.7 | 0.000196 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.7 | 0.000196 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.7.1 | 0.000113 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.70 | 0.000209 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.72 | 0.001361 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.75.1 | 0.00018 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.76 | 0.004831 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 1 | AY.79 | 0.001211 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.8 | 0.000606 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.83 | 0.001724 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.85 | 0.000427 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 1 | AY.85 | 0.000427 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | AY.9 | 0.000068 |
ORF3a | 44 | G44L | GGa | TTa | 1 | 1 | AY.9 | 0.000068 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.9 | 0.000068 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.9 | 0.000068 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.9.1 | 0.000084 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.9.2 | 0.000037 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.90 | 0.000684 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | AY.91 | 0.00073 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.91 | 0.00073 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.93 | 0.000273 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.94 | 0.000443 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | AY.98.1 | 0.000048 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.98.1 | 0.000048 |
ORF3a | 44 | G44L | GGa | TTa | 1 | 1 | AY.98.1 | 0.000048 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | AY.99.2 | 0.000092 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | AY.99.2 | 0.000092 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | AZ.5 | 0.003509 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B | 0.000128 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B | 0.000128 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B | 0.000128 |
ORF3a | 44 | G44A | gGa | gCa | 1 | 1 | B.1 | 0.000009 |
ORF3a | 44 | G44L | GGa | TTa | 1 | 1 | B.1.1 | 0.000018 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.1.117 | 0.009709 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.1.117 | 0.009709 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | B.1.1.139 | 0.022727 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.1.141 | 0.002012 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.171 | 0.003676 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.197 | 0.037037 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.207 | 0.001182 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.1.214 | 0.000055 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | B.1.1.214 | 0.000055 |
ORF3a | 44 | G44L | GGa | TTa | 1 | 1 | B.1.1.214 | 0.000055 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.1.225 | 0.007194 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.231 | 0.003096 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.25 | 0.000569 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.1.269 | 0.001353 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.277 | 0.000759 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.1.279 | 0.001121 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.28 | 0.000311 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.1.28 | 0.000311 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.1.286 | 0.002899 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.1.294 | 0.001266 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.1.294 | 0.001266 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.1.301 | 0.001179 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | B.1.1.302 | 0.002075 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.304 | 0.002809 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 1 | B.1.1.311 | 0.000358 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.329 | 0.003846 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 1 | B.1.1.33 | 0.000421 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.1.347 | 0.018182 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.1.348 | 0.000796 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.1.351 | 0.002793 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.363 | 0.005988 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.39 | 0.00051 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.1.396 | 0.045455 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.397 | 0.002252 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.1.409 | 0.002833 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.1.409 | 0.002833 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.1.409 | 0.002833 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.41 | 0.006329 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.418 | 0.022727 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.1.431 | 0.016129 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.1.448 | 0.002033 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.45 | 0.014085 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.1.48 | 0.002874 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.1.50 | 0.000679 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.1.507 | 0.008696 |
ORF3a | 44 | G44K | GGa | AAa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | B.1.1.7 | 0.000001 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.1.70 | 0.000341 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.1.8 | 0.003584 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.108 | 0.005814 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.139 | 0.000733 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.158 | 0.02381 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 1 | B.1.160.16 | 0.000929 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.160.16 | 0.000929 |
ORF3a | 44 | G44A | gGa | gCa | 1 | 1 | B.1.177 | 0.000013 |
ORF3a | 44 | G44K | GGa | AAa | 1 | 1 | B.1.177 | 0.000013 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.177.12 | 0.000152 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 1 | B.1.177.17 | 0.000821 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.177.21 | 0.000076 |
ORF3a | 44 | G44K | GGa | AAa | 1 | 1 | B.1.177.3 | 0.007634 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.177.56 | 0.000668 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.177.57 | 0.000281 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.177.6 | 0.000977 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.177.60 | 0.000218 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 1 | B.1.177.73 | 0.000566 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.177.73 | 0.000566 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | B.1.177.81 | 0.000189 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.177.85 | 0.005435 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | B.1.2 | 0.000009 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.210 | 0.002132 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 1 | B.1.234 | 0.000132 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.236 | 0.002053 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.241 | 0.000812 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.243 | 0.00007 |
ORF3a | 44 | G44A | gGa | gCa | 1 | 1 | B.1.258 | 0.000067 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.263 | 0.047619 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.279 | 0.000514 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.298 | 0.002114 |
ORF3a | 44 | G44G | ggA | ggT | 1 | 1 | B.1.311 | 0.000275 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.311 | 0.000275 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.326 | 0.007576 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.333 | 0.010526 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.351.3 | 0.000876 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.351.5 | 0.0006 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.36.10 | 0.004785 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.36.17 | 0.000494 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.36.18 | 0.00042 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.36.29 | 0.000517 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.36.29 | 0.000517 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.36.29 | 0.000517 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.36.31 | 0.001751 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.36.38 | 0.001642 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.36.8 | 0.001 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.362 | 0.001541 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.367 | 0.000792 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.369 | 0.000285 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.369 | 0.000285 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.399 | 0.001934 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.400 | 0.000429 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.400 | 0.000429 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.400 | 0.000429 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.408 | 0.00369 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.425 | 0.002994 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.427 | 0.00005 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | B.1.429 | 0.000024 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.438 | 0.006536 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.438.1 | 0.000107 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.468 | 0.005714 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.470 | 0.001404 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.505 | 0.004386 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.526 | 0.000024 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 1 | B.1.549 | 0.007194 |
ORF3a | 44 | G44G | ggA | ggC | 1 | 1 | B.1.561 | 0.000397 |
ORF3a | 44 | G44A | gGa | gCa | 1 | 1 | B.1.565 | 0.00081 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.567 | 0.003333 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.582 | 0.000491 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | B.1.595 | 0.000261 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.595 | 0.000261 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.596 | 0.000087 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.596 | 0.000087 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.617.1 | 0.000129 |
ORF3a | 44 | G44L | GGa | TTa | 1 | 1 | B.1.617.2 | 0.000004 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | B.1.617.2 | 0.000004 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.619 | 0.000871 |
ORF3a | 44 | G44S | GGa | TCa | 1 | 1 | B.1.621 | 0.000089 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.1.623 | 0.000536 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.625 | 0.002353 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.628 | 0.000352 |
ORF3a | 44 | G44A | gGa | gCa | 1 | 1 | B.1.630 | 0.005236 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.637 | 0.000073 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | B.1.637 | 0.000073 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | B.1.638 | 0.052632 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.1.9.4 | 0.006135 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.1.9.5 | 0.005682 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | B.3 | 0.000831 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | B.3.1 | 0.001658 |
ORF3a | 44 | G44R | Gga | Cga | 1 | 1 | B.39 | 0.002331 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | B.61 | 0.005747 |
ORF3a | 44 | G44A | gGa | gCa | 1 | 1 | C.1.2 | 0.004255 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | C.26 | 0.007353 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | C.36.3 | 0.000567 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | C.37 | 0.000116 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | C.37 | 0.000116 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | C.37.1 | 0.002618 |
ORF3a | 44 | G44X | Gga | Tga | 1 | 1 | D.2 | 0.000075 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | D.2 | 0.000075 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | P.1 | 0.000016 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | P.1.10 | 0.000269 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | P.1.10.1 | 0.00813 |
ORF3a | 44 | G44G | ggA | ggG | 1 | 1 | P.1.12 | 0.000484 |
ORF3a | 44 | G44A | gGa | gCa | 1 | 1 | P.1.12 | 0.000484 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | P.1.12 | 0.000484 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | P.1.14 | 0.000048 |
ORF3a | 44 | G44del | GGA | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF3a | 44 | G44R | Gga | Aga | 1 | 1 | P.1.16 | 0.000374 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | P.1.17 | 0.000162 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | Q.1 | 0.000126 |
ORF3a | 44 | G44E | gGa | gAa | 1 | 1 | Q.7 | 0.001111 |
ORF3a | 44 | G44V | gGa | gTa | 1 | 1 | U.3 | 0.003861 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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