CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 43

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a43F43FsynttCttT2197721977125519-25521
ORF3a43F43LnonsynTtcCtc151611670.76978925519-25521
ORF3a43F43LnonsynttCttA15162150.14182125519-25521
ORF3a43F43LnonsynttCttG15161170.077176825519-25521
ORF3a43F43LnonsynTtCCtT1516170.011213725519-25521
ORF3a43F43deldelTTC---10871087125519-25521
ORF3a43F43SnonsyntTctCc5405380.99629625519-25521
ORF3a43F43SnonsyntTCtCT54020.003703725519-25521
ORF3a43F43VnonsynTtcGtc258258125519-25521
ORF3a43F43CnonsyntTctGc121121125519-25521
ORF3a43F43YnonsyntTctAc43420.97674425519-25521
ORF3a43F43YnonsyntTCtAT4310.023255825519-25521
ORF3a43F43InonsynTtcAtc29260.89655225519-25521
ORF3a43F43InonsynTtCAtT2930.10344825519-25521
ORF3a43F43del1delTtc-tc25170.6825519-25521
ORF3a43F43del1delttCtt-2580.3225519-25521
ORF3a43F43del2deltTCt--940.44444425519-25521
ORF3a43F43del2delTTc--c930.33333325519-25521
ORF3a43F43del2delTTC--N920.22222225519-25521
ORF3a43F43RnonsynTTCCGG420.525519-25521
ORF3a43F43RnonsynTTcCGc420.525519-25521
ORF3a43F43XnonsyntTCtAG22125519-25521
ORF3a43F43QnonsynTTCCAG22125519-25521
ORF3a43F43WnonsyntTCtGG22125519-25521
ORF3a43F43HnonsynTTcCAc22125519-25521

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a43F43FttCttT2197721977All0.004203
ORF3a43F43FttCttT29792979B.1.1.70.002667
ORF3a43F43FttCttT25752575AY.40.004008
ORF3a43F43FttCttT23902390AY.250.014375
ORF3a43F43LTtcCtc11671516All0.000223
ORF3a43F43LttCttA2151516All0.000041
ORF3a43F43LttCttG1171516All0.000022
ORF3a43F43LTtCCtT171516All0.000003
ORF3a43F43FttCttT12301230B.1.1.3480.979299
ORF3a43F43delTTC---10871087All0.000208
ORF3a43F43FttCttT830830B.1.617.20.003125
ORF3a43F43FttCttT643643B.1.5610.25526
ORF3a43F43FttCttT584584AY.430.002587
ORF3a43F43StTctCc538540All0.000103
ORF3a43F43StTCtCT2540All0
ORF3a43F43FttCttT525525B.1.4270.026511
ORF3a43F43FttCttT464464AY.440.002824
ORF3a43F43FttCttT464464B.1.4290.010917
ORF3a43F43FttCttT442442B.1.20.003892
ORF3a43F43FttCttT440440AY.30.004376
ORF3a43F43FttCttT386386AY.1030.002397
ORF3a43F43LTtcCtc361376B.1.617.20.001359
ORF3a43F43LttCttA9376B.1.617.20.000034
ORF3a43F43LttCttG5376B.1.617.20.000019
ORF3a43F43LTtCCtT1376B.1.617.20.000004
ORF3a43F43FttCttT347347B.10.003178
ORF3a43F43FttCttT313313B.1.10.005678
ORF3a43F43FttCttT292292P.10.0046
ORF3a43F43FttCttT282282AY.390.006969
ORF3a43F43FttCttT272272AY.260.0077
ORF3a43F43VTtcGtc258258All0.000049
ORF3a43F43LTtcCtc223231AY.430.000988
ORF3a43F43LttCttG6231AY.430.000027
ORF3a43F43LttCttA2231AY.430.000009
ORF3a43F43VTtcGtc220220B.1.177.21
ORF3a43F43FttCttT213213AY.470.006625
ORF3a43F43FttCttT206206B.1.1770.002713
ORF3a43F43delTTC---192192AY.260.005436
ORF3a43F43FttCttT192192B.1.1.5190.007624
ORF3a43F43FttCttT180180B.1.5770.123711
ORF3a43F43LTtcCtc141175AY.40.000219
ORF3a43F43LttCttA29175AY.40.000045
ORF3a43F43LttCttG5175AY.40.000008
ORF3a43F43FttCttT165165B.1.5960.014378
ORF3a43F43delTTC---153153B.1.6300.801047
ORF3a43F43FttCttT149149AY.1200.00554
ORF3a43F43FttCttT143143B.1.177.261
ORF3a43F43FttCttT142142AY.39.10.005625
ORF3a43F43LTtcCtc95135B.1.1.70.000085
ORF3a43F43LttCttA29135B.1.1.70.000026
ORF3a43F43LttCttG10135B.1.1.70.000009
ORF3a43F43LTtCCtT1135B.1.1.70.000001
ORF3a43F43CtTctGc121121All0.000023
ORF3a43F43FttCttT115115B.1.1.3680.354938
ORF3a43F43FttCttT107107AY.330.007145
ORF3a43F43FttCttT106106AY.230.007393
ORF3a43F43FttCttT103103B.1.1.2140.005712
ORF3a43F43LttCttA71102AY.440.000432
ORF3a43F43LTtcCtc28102AY.440.00017
ORF3a43F43LttCttG3102AY.440.000018
ORF3a43F43FttCttT100100AY.1020.002651
ORF3a43F43FttCttT100100AY.50.002065
ORF3a43F43StTctCc99100B.1.1.70.000089
ORF3a43F43StTCtCT1100B.1.1.70.000001
ORF3a43F43FttCttT9191AY.98.10.004407
ORF3a43F43FttCttT8787B.1.3510.002586
ORF3a43F43delTTC---8686B.1.20.000757
ORF3a43F43FttCttT8585AY.290.001341
ORF3a43F43LTtcCtc8585AY.390.0021
ORF3a43F43FttCttT8383AY.200.003226
ORF3a43F43FttCttT8181B.1.1600.002526
ORF3a43F43delTTC---7878AY.750.00437
ORF3a43F43FttCttT7878B.1.1.1570.071233
ORF3a43F43FttCttT7676AY.420.003057
ORF3a43F43FttCttT7575B.1.1.2730.506757
ORF3a43F43FttCttT7575B.1.4060.454545
ORF3a43F43FttCttT7171Q.70.078889
ORF3a43F43FttCttT6969B.1.6210.006108
ORF3a43F43FttCttT6767AY.4.20.001453
ORF3a43F43FttCttT6565AY.1000.00299
ORF3a43F43FttCttT6565AY.1180.004072
ORF3a43F43FttCttT6565R.10.005851
ORF3a43F43FttCttT6060B.1.36.160.08547
ORF3a43F43delTTC---5858AY.430.000257
ORF3a43F43FttCttT5757B.1.5260.00134
ORF3a43F43FttCttT5656AY.1190.001977
ORF3a43F43delTTC---5555B.1.1.70.000049
ORF3a43F43FttCttT5555B.1.36.310.096322
ORF3a43F43delTTC---5454B.1.177.820.025776
ORF3a43F43FttCttT5353B.1.2430.003688
ORF3a43F43LttCttG4952AY.470.001524
ORF3a43F43LTtcCtc352AY.470.000093
ORF3a43F43FttCttT5050A.2.50.02495
ORF3a43F43FttCttT5050C.370.005803
ORF3a43F43FttCttT4949B.1.177.820.023389
ORF3a43F43FttCttT4646AY.240.019828
ORF3a43F43FttCttT4646B.1.177.210.003518
ORF3a43F43FttCttT4545AY.750.002521
ORF3a43F43CtTctGc4444B.1.438.10.00472
ORF3a43F43YtTctAc4243All0.000008
ORF3a43F43YtTCtAT143All0
ORF3a43F43FttCttT4242AY.120.013274
ORF3a43F43delTTC---4242AY.40.000065
ORF3a43F43delTTC---4242AY.420.00169
ORF3a43F43FttCttT4141AY.1090.030325
ORF3a43F43FttCttT4141D.20.003077
ORF3a43F43FttCttT4040B.1.2210.002841
ORF3a43F43FttCttT3838AY.60.001563
ORF3a43F43FttCttT3838B.1.258.110.015061
ORF3a43F43FttCttT3737AY.450.004502
ORF3a43F43delTTC---3636B.1.1770.000474
ORF3a43F43FttCttT3535AY.610.003667
ORF3a43F43LTtcCtc3434AY.420.001368
ORF3a43F43StTctCc3434B.1.1.2070.040189
ORF3a43F43FttCttT3434B.1.2340.004486
ORF3a43F43StTctCc3434B.1.617.20.000128
ORF3a43F43StTctCc3232AY.40.00005
ORF3a43F43FttCttT3232AY.510.029091
ORF3a43F43FttCttT3232B.1.1.4340.011154
ORF3a43F43FttCttT3232B.1.1050.307692
ORF3a43F43FttCttT3232B.1.36.290.016555
ORF3a43F43FttCttT3232B.1.617.10.004127
ORF3a43F43FttCttT3131AY.3.10.002643
ORF3a43F43FttCttT3131B.1.416.10.048438
ORF3a43F43StTctCc3030A0.01161
ORF3a43F43StTctCc3030AY.30.000298
ORF3a43F43FttCttT3030AY.9.20.001102
ORF3a43F43FttCttT3030B.1.1.1530.032859
ORF3a43F43FttCttT3030B.1.2580.001996
ORF3a43F43FttCttT3030B.1.360.004377
ORF3a43F43FttCttT3030B.1.4000.01287
ORF3a43F43ITtcAtc2629All0.000005
ORF3a43F43ITtCAtT329All0.000001
ORF3a43F43FttCttT2929AY.1130.004129
ORF3a43F43LTtcCtc2229P.10.000347
ORF3a43F43LttCttG629P.10.000095
ORF3a43F43LTtCCtT129P.10.000016
ORF3a43F43FttCttT2828P.1.140.001338
ORF3a43F43FttCttT2727AY.90.001825
ORF3a43F43FttCttT2727B.1.3110.007414
ORF3a43F43FttCttT2626Q.10.003284
ORF3a43F43del1Ttc-tc1725All0.000003
ORF3a43F43del1ttCtt-825All0.000002
ORF3a43F43FttCttT2525AY.46.40.004113
ORF3a43F43FttCttT2525B.1.5250.002829
ORF3a43F43LTtcCtc2424AY.460.002498
ORF3a43F43FttCttT2424AY.5.40.006641
ORF3a43F43FttCttT2424AY.980.001896
ORF3a43F43delTTC---2424B.1.10.000435
ORF3a43F43FttCttT2323AY.270.001489
ORF3a43F43FttCttT2323AY.300.009102
ORF3a43F43FttCttT2323AY.540.002193
ORF3a43F43LttCttA2323B.1.1.80.082437
ORF3a43F43FttCttT2222AY.1170.001859
ORF3a43F43FttCttT2222AY.130.003542
ORF3a43F43StTctCc2222AY.430.000097
ORF3a43F43FttCttT2222B.1.1.1920.050808
ORF3a43F43FttCttT2222B.1.1.5060.814815
ORF3a43F43delTTC---2121AY.250.000126
ORF3a43F43FttCttT2121B.1.6200.019868
ORF3a43F43FttCttT2020A.50.038462
ORF3a43F43FttCttT2020AY.360.002964
ORF3a43F43StTctCc2020B.1.1.5190.000794
ORF3a43F43delTTC---2020B.1.617.20.000075
ORF3a43F43FttCttT1919AY.9.10.001591
ORF3a43F43FttCttT1818AY.1210.002436
ORF3a43F43FttCttT1818AY.46.60.0013
ORF3a43F43FttCttT1818AY.630.006963
ORF3a43F43StTctCc1818B.10.000165
ORF3a43F43CtTctGc1616AY.290.000252
ORF3a43F43FttCttT1616B.1.1.280.00498
ORF3a43F43FttCttT1616B.1.2060.013051
ORF3a43F43FttCttT1616P.1.150.003717
ORF3a43F43FttCttT1616P.20.002986
ORF3a43F43delTTC---1515AY.1030.000093
ORF3a43F43LTtcCtc915AY.250.000054
ORF3a43F43LTtCCtT315AY.250.000018
ORF3a43F43LttCttG315AY.250.000018
ORF3a43F43delTTC---1515AY.4.20.000325
ORF3a43F43FttCttT1515B.1.5950.003914
ORF3a43F43FttCttT1515N.50.026502
ORF3a43F43FttCttT1414AY.340.001358
ORF3a43F43FttCttT1414B0.001789
ORF3a43F43FttCttT1414B.1.1.4320.017722
ORF3a43F43FttCttT1414B.1.177.570.003934
ORF3a43F43FttCttT1414B.1.36.80.014
ORF3a43F43FttCttT1414B.1.3690.003993
ORF3a43F43StTctCc1414B.1.4970.004407
ORF3a43F43FttCttT1414P.1.160.005238
ORF3a43F43FttCttT1414P.1.70.00447
ORF3a43F43StTctCc1313AY.250.000078
ORF3a43F43delTTC---1313AY.30.000129
ORF3a43F43FttCttT1313AY.350.00303
ORF3a43F43FttCttT1313AY.4.40.005319
ORF3a43F43FttCttT1313AY.4.50.001397
ORF3a43F43LttCttG1313AY.70.002548
ORF3a43F43FttCttT1313AY.75.10.002344
ORF3a43F43delTTC---1313AY.98.10.00063
ORF3a43F43FttCttT1313AY.99.20.001198
ORF3a43F43FttCttT1313B.1.1.2220.002652
ORF3a43F43FttCttT1313B.1.36.220.0157
ORF3a43F43FttCttT1313B.1.4700.018258
ORF3a43F43FttCttT1313XA0.288889
ORF3a43F43FttCttT1212B.1.1.250.006822
ORF3a43F43FttCttT1212B.1.5490.086331
ORF3a43F43del1Ttc-tc1212P.10.000189
ORF3a43F43LttCttA711AY.1020.000186
ORF3a43F43LTtcCtc311AY.1020.00008
ORF3a43F43LttCttG111AY.1020.000027
ORF3a43F43YtTctAc1111AY.410.003233
ORF3a43F43FttCttT1111AY.530.003163
ORF3a43F43StTctCc1111B.1.10.0002
ORF3a43F43LTtcCtc1111B.1.1.1890.016641
ORF3a43F43FttCttT1111B.1.1.3070.027848
ORF3a43F43FttCttT1111B.1.1.3110.00394
ORF3a43F43StTctCc1111B.1.1.4340.003834
ORF3a43F43FttCttT1111B.1.4330.035144
ORF3a43F43FttCttT1111B.1.438.10.00118
ORF3a43F43LTtCCtT1111B.1.6370.000804
ORF3a43F43delTTC---1010AY.440.000061
ORF3a43F43FttCttT1010AY.640.005952
ORF3a43F43FttCttT1010AY.770.011274
ORF3a43F43FttCttT1010B.1.1.2910.007424
ORF3a43F43FttCttT1010B.1.1.700.003411
ORF3a43F43StTctCc1010B.1.20.000088
ORF3a43F43StTctCc1010B.1.4270.000505
ORF3a43F43FttCttT1010C.36.30.005672
ORF3a43F43LTtcCtc1010P.60.031447
ORF3a43F43del2tTCt--49All0.000001
ORF3a43F43del2TTc--c39All0.000001
ORF3a43F43del2TTC--N29All0
ORF3a43F43FttCttT99AY.120.10.002889
ORF3a43F43FttCttT99AY.140.000792
ORF3a43F43FttCttT99AY.160.003417
ORF3a43F43FttCttT99AY.190.010262
ORF3a43F43LTtcCtc49AY.200.000155
ORF3a43F43LttCttA49AY.200.000155
ORF3a43F43LttCttG19AY.200.000039
ORF3a43F43StTctCc99AY.390.000222
ORF3a43F43FttCttT99AY.900.00616
ORF3a43F43LTtcCtc49B.10.000037
ORF3a43F43LttCttA39B.10.000027
ORF3a43F43LttCttG29B.10.000018
ORF3a43F43FttCttT99B.1.1.2740.045455
ORF3a43F43FttCttT99B.1.1.3720.006198
ORF3a43F43FttCttT99B.1.177.60.008789
ORF3a43F43FttCttT99B.1.177.860.001651
ORF3a43F43delTTC---99B.1.2580.000599
ORF3a43F43FttCttT99B.1.36.380.014778
ORF3a43F43FttCttT99B.1.5970.041667
ORF3a43F43ITtcAtc99B.400.003279
ORF3a43F43FttCttT99C.160.009544
ORF3a43F43FttCttT88AY.1100.000902
ORF3a43F43StTctCc88AY.440.000049
ORF3a43F43FttCttT88AY.590.004237
ORF3a43F43FttCttT88AY.690.001493
ORF3a43F43FttCttT88AY.7.10.000902
ORF3a43F43FttCttT88AY.880.007073
ORF3a43F43VTtcGtc88B.1.10.000145
ORF3a43F43FttCttT88B.1.1.10.002614
ORF3a43F43FttCttT88B.1.1.1890.012103
ORF3a43F43FttCttT88B.1.1.3220.070175
ORF3a43F43FttCttT88B.1.1.330.003367
ORF3a43F43FttCttT88B.1.1.630.003086
ORF3a43F43CtTctGc88B.1.1.70.000007
ORF3a43F43FttCttT88B.1.36.170.003953
ORF3a43F43FttCttT88B.1.4990.008403
ORF3a43F43FttCttT88Q.80.001319
ORF3a43F43StTctCc77AY.1030.000043
ORF3a43F43LTtcCtc47AY.1030.000025
ORF3a43F43LttCttA37AY.1030.000019
ORF3a43F43FttCttT77AY.1060.002344
ORF3a43F43FttCttT77AY.1160.002007
ORF3a43F43FttCttT77AY.20.002493
ORF3a43F43delTTC---77AY.390.000173
ORF3a43F43FttCttT77AY.4.2.10.001043
ORF3a43F43FttCttT77AY.550.006422
ORF3a43F43FttCttT77AY.70.001372
ORF3a43F43FttCttT77AY.740.00081
ORF3a43F43FttCttT77B.1.1.2310.021672
ORF3a43F43FttCttT77B.1.1.370.00135
ORF3a43F43YtTctAc77B.1.1.70.000006
ORF3a43F43FttCttT77B.1.177.120.001062
ORF3a43F43CtTctGc77B.1.20.000062
ORF3a43F43StTctCc77B.1.2390.008547
ORF3a43F43FttCttT77B.1.2390.008547
ORF3a43F43StTctCc67B.1.466.20.002347
ORF3a43F43StTCtCT17B.1.466.20.000391
ORF3a43F43StTctCc77B.1.5750.002124
ORF3a43F43FttCttT77B.400.00255
ORF3a43F43FttCttT66AY.1110.001099
ORF3a43F43LTtcCtc66AY.260.00017
ORF3a43F43FttCttT66AY.29.10.001323
ORF3a43F43FttCttT66AY.34.10.00306
ORF3a43F43CtTctGc66AY.40.000009
ORF3a43F43CtTctGc66AY.430.000027
ORF3a43F43LTtcCtc66AY.450.00073
ORF3a43F43FttCttT66AY.460.000624
ORF3a43F43FttCttT66AY.710.00285
ORF3a43F43FttCttT66AY.720.008163
ORF3a43F43CtTctGc66AY.90.000406
ORF3a43F43delTTC---66B.10.000055
ORF3a43F43LTtcCtc66B.1.10.000109
ORF3a43F43CtTctGc66B.1.1.1410.012072
ORF3a43F43FttCttT66B.1.1.2200.011152
ORF3a43F43FttCttT66B.1.1.3060.00263
ORF3a43F43FttCttT66B.1.1.3120.011472
ORF3a43F43FttCttT66B.1.1.3260.010563
ORF3a43F43FttCttT66B.1.1.4200.006036
ORF3a43F43StTctCc66B.1.1770.000079
ORF3a43F43FttCttT66B.1.177.40.001266
ORF3a43F43FttCttT66B.1.258.170.000624
ORF3a43F43FttCttT66B.1.3670.004754
ORF3a43F43FttCttT66B.1.3890.006012
ORF3a43F43FttCttT66B.1.4090.004687
ORF3a43F43FttCttT66B.1.4110.022222
ORF3a43F43StTctCc66B.1.4410.057692
ORF3a43F43FttCttT66B.1.6370.000438
ORF3a43F43FttCttT66P.1.120.002904
ORF3a43F43FttCttT66P.1.20.006936
ORF3a43F43FttCttT55A.10.001409
ORF3a43F43FttCttT55A.280.013228
ORF3a43F43FttCttT55AY.1070.00233
ORF3a43F43FttCttT55AY.1140.001156
ORF3a43F43FttCttT55AY.380.002496
ORF3a43F43delTTC---55AY.39.10.000198
ORF3a43F43LttCttG45AY.39.10.000158
ORF3a43F43LTtcCtc15AY.39.10.00004
ORF3a43F43delTTC---55AY.50.000103
ORF3a43F43LttCttA35AY.50.000062
ORF3a43F43LTtcCtc25AY.50.000041
ORF3a43F43FttCttT55AY.840.002187
ORF3a43F43LTtcCtc45AY.98.10.000194
ORF3a43F43LttCttA15AY.98.10.000048
ORF3a43F43FttCttT55B.1.1.1700.006234
ORF3a43F43FttCttT55B.1.1.2160.004452
ORF3a43F43FttCttT55B.1.1.2690.006766
ORF3a43F43FttCttT55B.1.1.2840.000537
ORF3a43F43FttCttT55B.1.1.3180.001509
ORF3a43F43VTtcGtc55B.1.1.70.000004
ORF3a43F43FttCttT55B.1.177.440.002595
ORF3a43F43FttCttT55B.1.177.600.001092
ORF3a43F43FttCttT55B.1.177.670.038168
ORF3a43F43FttCttT55B.1.177.70.000824
ORF3a43F43FttCttT55B.1.177.810.000947
ORF3a43F43LTtcCtc35B.1.20.000026
ORF3a43F43LttCttG15B.1.20.000009
ORF3a43F43LttCttA15B.1.20.000009
ORF3a43F43FttCttT55B.1.2400.001078
ORF3a43F43FttCttT55B.1.4200.052083
ORF3a43F43delTTC---55B.1.438.10.000536
ORF3a43F43FttCttT55B.1.5410.022124
ORF3a43F43FttCttT55B.1.5510.006452
ORF3a43F43RTTCCGG240.111111
ORF3a43F43RTTcCGc240.111111
ORF3a43F43FttCttT44A.20.002647
ORF3a43F43RTTCCGG24All0
ORF3a43F43RTTcCGc24All0
ORF3a43F43StTctCc44AY.1020.000106
ORF3a43F43LTtcCtc44AY.1190.000141
ORF3a43F43FttCttT44AY.16.10.00188
ORF3a43F43LTtcCtc34AY.30.00003
ORF3a43F43LttCttA14AY.30.00001
ORF3a43F43del1Ttc-tc34AY.40.000005
ORF3a43F43del1ttCtt-14AY.40.000002
ORF3a43F43FttCttT44AY.410.001176
ORF3a43F43FttCttT44AY.46.50.000794
ORF3a43F43FttCttT44AY.5.30.00135
ORF3a43F43FttCttT44AY.650.002132
ORF3a43F43FttCttT44AY.700.000834
ORF3a43F43delTTC---44AY.980.000316
ORF3a43F43StTctCc44B.1.1.10.001307
ORF3a43F43LTtcCtc34B.1.1.2140.000166
ORF3a43F43LttCttG14B.1.1.2140.000055
ORF3a43F43FttCttT44B.1.1.2820.046512
ORF3a43F43FttCttT44B.1.1.3170.001647
ORF3a43F43FttCttT44B.1.1.3970.009009
ORF3a43F43FttCttT44B.1.1.4090.011331
ORF3a43F43FttCttT44B.1.1.4860.006309
ORF3a43F43ITtcAtc44B.1.1.70.000004
ORF3a43F43FttCttT44B.1.1110.0047
ORF3a43F43LTtcCtc44B.1.1770.000053
ORF3a43F43FttCttT44B.1.177.350.002764
ORF3a43F43FttCttT44B.1.177.580.005326
ORF3a43F43FttCttT44B.1.177.590.064516
ORF3a43F43FttCttT44B.1.177.800.007648
ORF3a43F43FttCttT44B.1.177.870.002911
ORF3a43F43FttCttT44B.1.1990.016529
ORF3a43F43LTtcCtc44B.1.2580.000266
ORF3a43F43FttCttT44B.1.2790.002054
ORF3a43F43FttCttT44B.1.3290.00243
ORF3a43F43StTctCc44B.1.3510.000119
ORF3a43F43FttCttT44B.1.36.360.002408
ORF3a43F43FttCttT44B.1.5090.003463
ORF3a43F43delTTC---44B.1.5260.000094
ORF3a43F43LttCttA44B.1.5260.000094
ORF3a43F43FttCttT44B.1.5750.001214
ORF3a43F43FttCttT44B.1.6100.014184
ORF3a43F43FttCttT44B.1.6180.016129
ORF3a43F43FttCttT44B.1.6190.003484
ORF3a43F43FttCttT44B.3.10.006633
ORF3a43F43FttCttT44C.300.006908
ORF3a43F43delTTC---44P.1.90.019231
ORF3a43F43FttCttT33AD.20.000657
ORF3a43F43FttCttT33AU.20.007264
ORF3a43F43FttCttT33AY.1040.005952
ORF3a43F43FttCttT33AY.1080.003308
ORF3a43F43StTctCc33AY.1100.000338
ORF3a43F43StTctCc33AY.1180.000188
ORF3a43F43delTTC---33AY.1180.000188
ORF3a43F43delTTC---33AY.1200.000112
ORF3a43F43FttCttT33AY.120.20.003856
ORF3a43F43LttCttA33AY.290.000047
ORF3a43F43FttCttT33AY.320.001597
ORF3a43F43LttCttA33AY.340.000291
ORF3a43F43FttCttT33AY.370.000948
ORF3a43F43ITtcAtc33AY.40.000005
ORF3a43F43LTtcCtc33AY.4.20.000065
ORF3a43F43delTTC---33AY.4.50.000322
ORF3a43F43delTTC---33AY.400.002893
ORF3a43F43VTtcGtc33AY.440.000018
ORF3a43F43YtTctAc33AY.440.000018
ORF3a43F43delTTC---33AY.450.000365
ORF3a43F43FttCttT33AY.46.20.001906
ORF3a43F43FttCttT33AY.520.002443
ORF3a43F43FttCttT33AY.670.001393
ORF3a43F43FttCttT33AY.730.001996
ORF3a43F43del2TTC--N23AY.750.000112
ORF3a43F43del2TTc--c13AY.750.000056
ORF3a43F43FttCttT33AY.790.003632
ORF3a43F43FttCttT33AY.80.001818
ORF3a43F43FttCttT33AY.800.003386
ORF3a43F43StTctCc33AY.90.000203
ORF3a43F43FttCttT33AY.930.000819
ORF3a43F43FttCttT33AY.940.001328
ORF3a43F43StTctCc33AY.99.20.000276
ORF3a43F43LttCttA33B.1.1.10.00098
ORF3a43F43FttCttT33B.1.1.120.022388
ORF3a43F43LttCttA33B.1.1.1590.014019
ORF3a43F43FttCttT33B.1.1.1740.010135
ORF3a43F43FttCttT33B.1.1.1800.032258
ORF3a43F43FttCttT33B.1.1.1860.010309
ORF3a43F43FttCttT33B.1.1.1980.004405
ORF3a43F43FttCttT33B.1.1.2410.006211
ORF3a43F43FttCttT33B.1.1.2890.00625
ORF3a43F43FttCttT33B.1.1.3160.002775
ORF3a43F43FttCttT33B.1.1.390.001529
ORF3a43F43FttCttT33B.1.1.410.018987
ORF3a43F43ITtCAtT33B.1.1.4290.013825
ORF3a43F43FttCttT33B.1.1.4620.025862
ORF3a43F43FttCttT33B.1.1.4640.004418
ORF3a43F43YtTctAc33B.1.1100.013575
ORF3a43F43FttCttT33B.1.1280.001906
ORF3a43F43FttCttT33B.1.1470.002268
ORF3a43F43delTTC---33B.1.160.240.013274
ORF3a43F43FttCttT33B.1.177.430.004431
ORF3a43F43FttCttT33B.1.177.540.001819
ORF3a43F43FttCttT33B.1.177.550.006993
ORF3a43F43FttCttT33B.1.177.560.002003
ORF3a43F43FttCttT33B.1.177.650.001996
ORF3a43F43FttCttT33B.1.177.80.002257
ORF3a43F43LTtcCtc33B.1.2340.000396
ORF3a43F43LTtcCtc23B.1.2430.000139
ORF3a43F43LttCttG13B.1.2430.00007
ORF3a43F43StTctCc33B.1.2580.0002
ORF3a43F43FttCttT33B.1.258.70.005736
ORF3a43F43FttCttT33B.1.3320.01049
ORF3a43F43delTTC---33B.1.36.170.001482
ORF3a43F43FttCttT33B.1.36.180.001261
ORF3a43F43FttCttT33B.1.3960.002117
ORF3a43F43FttCttT33B.1.4040.003906
ORF3a43F43delTTC---33B.1.4270.000151
ORF3a43F43FttCttT33B.1.4280.003061
ORF3a43F43StTctCc33B.1.4290.000071
ORF3a43F43FttCttT33B.1.4560.009804
ORF3a43F43FttCttT33B.1.466.20.001174
ORF3a43F43del1ttCtt-33B.1.5260.000071
ORF3a43F43StTctCc33B.1.5640.001278
ORF3a43F43LTtcCtc33B.1.5750.00091
ORF3a43F43FttCttT33B.1.5820.001472
ORF3a43F43FttCttT33B.1.6090.001438
ORF3a43F43LTtcCtc33B.1.617.10.000387
ORF3a43F43FttCttT33B.1.6250.007059
ORF3a43F43delTTC---33B.1.6370.000219
ORF3a43F43FttCttT33B.1.930.002801
ORF3a43F43FttCttT33B.30.002492
ORF3a43F43StTctCc33C.140.012987
ORF3a43F43FttCttT33C.170.166667
ORF3a43F43FttCttT33C.360.002732
ORF3a43F43ITtcAtc33P.10.000047
ORF3a43F43StTctCc33P.10.000047
ORF3a43F43FttCttT33P.1.100.000808
ORF3a43F43LTtcCtc33P.1.150.000697
ORF3a43F43FttCttT33P.1.170.000485
ORF3a43F43FttCttT33Q.30.000435
ORF3a43F43delTTC---33U.30.011583
ORF3a43F43FttCttT33Z.10.008671
ORF3a43F43HTTcCAc220.111111
ORF3a43F43YtTctAc220.111111
ORF3a43F43CtTctGc220.111111
ORF3a43F43WtTCtGG220.111111
ORF3a43F43XtTCtAG220.111111
ORF3a43F43QTTCCAG220.111111
ORF3a43F43FttCttT22A.2.5.20.003145
ORF3a43F43VTtcGtc22A.23.10.001408
ORF3a43F43FttCttT22AL.10.025974
ORF3a43F43XtTCtAG22All0
ORF3a43F43QTTCCAG22All0
ORF3a43F43HTTcCAc22All0
ORF3a43F43WtTCtGG22All0
ORF3a43F43FttCttT22AY.100.00106
ORF3a43F43delTTC---22AY.1000.000092
ORF3a43F43CtTctGc22AY.1030.000012
ORF3a43F43FttCttT22AY.1050.001286
ORF3a43F43delTTC---22AY.130.000322
ORF3a43F43LTtcCtc22AY.160.000759
ORF3a43F43delTTC---22AY.230.000139
ORF3a43F43CtTctGc22AY.250.000012
ORF3a43F43StTctCc22AY.260.000057
ORF3a43F43delTTC---22AY.290.000032
ORF3a43F43StTctCc22AY.290.000032
ORF3a43F43VTtcGtc22AY.290.000032
ORF3a43F43delTTC---22AY.330.000134
ORF3a43F43FttCttT22AY.39.20.003082
ORF3a43F43YtTctAc22AY.40.000003
ORF3a43F43del2TTc--c12AY.40.000002
ORF3a43F43del2tTCt--12AY.40.000002
ORF3a43F43FttCttT22AY.4.10.001475
ORF3a43F43StTctCc22AY.4.20.000043
ORF3a43F43VTtcGtc22AY.4.50.000215
ORF3a43F43FttCttT22AY.400.001929
ORF3a43F43ITtcAtc22AY.440.000012
ORF3a43F43StTctCc22AY.450.000243
ORF3a43F43FttCttT22AY.46.10.002053
ORF3a43F43delTTC---22AY.46.20.001271
ORF3a43F43CtTctGc22AY.50.000041
ORF3a43F43delTTC---22AY.60.000082
ORF3a43F43delTTC---22AY.670.000929
ORF3a43F43FttCttT22AY.680.000547
ORF3a43F43CtTctGc22AY.740.000231
ORF3a43F43LTtcCtc22AY.75.10.000361
ORF3a43F43FttCttT22AY.780.003082
ORF3a43F43delTTC---22AY.810.003984
ORF3a43F43FttCttT22AY.820.002714
ORF3a43F43FttCttT22AY.850.000854
ORF3a43F43FttCttT22AY.870.001665
ORF3a43F43delTTC---22AY.9.20.000073
ORF3a43F43FttCttT22AY.910.001461
ORF3a43F43FttCttT22AY.920.000575
ORF3a43F43StTctCc22AY.980.000158
ORF3a43F43YtTctAc22B.10.000018
ORF3a43F43VTtcGtc22B.10.000018
ORF3a43F43FttCttT22B.1.1.100.00223
ORF3a43F43FttCttT22B.1.1.1710.007353
ORF3a43F43FttCttT22B.1.1.2270.008696
ORF3a43F43FttCttT22B.1.1.2440.030769
ORF3a43F43FttCttT22B.1.1.2940.002532
ORF3a43F43StTctCc22B.1.1.3050.007722
ORF3a43F43FttCttT22B.1.1.3050.007722
ORF3a43F43FttCttT22B.1.1.3620.011236
ORF3a43F43FttCttT22B.1.1.3690.000892
ORF3a43F43FttCttT22B.1.1.3760.011905
ORF3a43F43FttCttT22B.1.1.3880.090909
ORF3a43F43FttCttT22B.1.1.4170.005405
ORF3a43F43FttCttT22B.1.1.4330.002849
ORF3a43F43FttCttT22B.1.1.460.008734
ORF3a43F43LTtcCtc22B.1.1.500.001358
ORF3a43F43delTTC---22B.1.1.5190.000079
ORF3a43F43FttCttT22B.1.1.5250.010929
ORF3a43F43FttCttT22B.1.1180.013423
ORF3a43F43FttCttT22B.1.1260.002551
ORF3a43F43FttCttT22B.1.1570.00597
ORF3a43F43FttCttT22B.1.160.240.00885
ORF3a43F43delTTC---22B.1.160.330.00885
ORF3a43F43FttCttT22B.1.160.80.002577
ORF3a43F43VTtcGtc22B.1.1770.000026
ORF3a43F43FttCttT22B.1.177.110.003396
ORF3a43F43FttCttT22B.1.177.200.003035
ORF3a43F43FttCttT22B.1.177.460.001837
ORF3a43F43delTTC---22B.1.177.600.000437
ORF3a43F43FttCttT22B.1.177.630.005405
ORF3a43F43FttCttT22B.1.177.730.001133
ORF3a43F43FttCttT22B.1.1890.008584
ORF3a43F43LTtcCtc22B.1.1990.008264
ORF3a43F43ITtcAtc22B.1.20.000018
ORF3a43F43FttCttT22B.1.2100.004264
ORF3a43F43delTTC---22B.1.2210.000142
ORF3a43F43FttCttT22B.1.2230.005556
ORF3a43F43FttCttT22B.1.230.012121
ORF3a43F43FttCttT22B.1.2320.001075
ORF3a43F43StTctCc22B.1.2340.000264
ORF3a43F43LttCttA12B.1.2400.000216
ORF3a43F43LTtcCtc12B.1.2400.000216
ORF3a43F43FttCttT22B.1.258.220.005333
ORF3a43F43FttCttT22B.1.258.30.00335
ORF3a43F43delTTC---22B.1.258.40.006897
ORF3a43F43FttCttT22B.1.258.40.006897
ORF3a43F43LttCttA22B.1.2640.024691
ORF3a43F43FttCttT22B.1.3490.00143
ORF3a43F43LTtcCtc22B.1.3500.005865
ORF3a43F43FttCttT22B.1.351.30.001753
ORF3a43F43FttCttT22B.1.3560.003454
ORF3a43F43FttCttT22B.1.36.270.001527
ORF3a43F43FttCttT22B.1.362.20.009434
ORF3a43F43FttCttT22B.1.3910.002255
ORF3a43F43FttCttT22B.1.3980.005952
ORF3a43F43FttCttT22B.1.429.10.024096
ORF3a43F43delTTC---22B.1.4710.005464
ORF3a43F43FttCttT22B.1.4710.005464
ORF3a43F43delTTC---22B.1.5250.000226
ORF3a43F43FttCttT22B.1.5270.007407
ORF3a43F43FttCttT22B.1.5370.04
ORF3a43F43FttCttT22B.1.5380.016129
ORF3a43F43CtTctGc22B.1.5610.000794
ORF3a43F43FttCttT22B.1.5740.004301
ORF3a43F43LttCttA22B.1.5800.00813
ORF3a43F43CtTctGc22B.1.617.20.000008
ORF3a43F43FttCttT22B.1.617.30.00597
ORF3a43F43FttCttT22B.1.619.10.001283
ORF3a43F43StTctCc22B.1.6210.000177
ORF3a43F43delTTC---22B.1.6210.000177
ORF3a43F43FttCttT22B.1.6280.000705
ORF3a43F43FttCttT22B.1.6360.013423
ORF3a43F43FttCttT22B.1.90.012346
ORF3a43F43delTTC---22D.20.00015
ORF3a43F43delTTC---22P.10.000032
ORF3a43F43FttCttT22P.1.10.000635
ORF3a43F43del1ttCtt-22P.1.10.000635
ORF3a43F43FttCttT22P.1.40.001953
ORF3a43F43FttCttT22P.30.00319
ORF3a43F43FttCttT11A0.000387
ORF3a43F43delTTC---11A.2.30.004739
ORF3a43F43LttCttA11A.2.5.20.001572
ORF3a43F43FttCttT11A.2.5.30.010309
ORF3a43F43FttCttT11A.23.10.000704
ORF3a43F43FttCttT11A.270.001656
ORF3a43F43FttCttT11A.30.002096
ORF3a43F43FttCttT11AA.70.009174
ORF3a43F43FttCttT11AE.20.058824
ORF3a43F43delTTC---11AH.30.003802
ORF3a43F43FttCttT11AT.10.005128
ORF3a43F43StTctCc11AY.10.000396
ORF3a43F43FttCttT11AY.10.000396
ORF3a43F43YtTctAc11AY.1000.000046
ORF3a43F43StTctCc11AY.1000.000046
ORF3a43F43LTtcCtc11AY.1010.00049
ORF3a43F43CtTctGc11AY.1020.000027
ORF3a43F43delTTC---11AY.1020.000027
ORF3a43F43CtTctGc11AY.1050.000643
ORF3a43F43LTtcCtc11AY.1050.000643
ORF3a43F43StTctCc11AY.1090.00074
ORF3a43F43delTTC---11AY.1110.000183
ORF3a43F43LttCttG11AY.1110.000183
ORF3a43F43delTTC---11AY.1130.000142
ORF3a43F43StTctCc11AY.1130.000142
ORF3a43F43delTTC---11AY.1140.000231
ORF3a43F43FttCttT11AY.116.10.000311
ORF3a43F43delTTC---11AY.1170.000085
ORF3a43F43LTtcCtc11AY.1170.000085
ORF3a43F43ITtcAtc11AY.1170.000085
ORF3a43F43StTctCc11AY.1170.000085
ORF3a43F43delTTC---11AY.1190.000035
ORF3a43F43StTctCc11AY.1190.000035
ORF3a43F43LTtcCtc11AY.130.000161
ORF3a43F43delTTC---11AY.140.000088
ORF3a43F43LttCttA11AY.16.10.00047
ORF3a43F43delTTC---11AY.200.000039
ORF3a43F43YtTctAc11AY.200.000039
ORF3a43F43StTctCc11AY.200.000039
ORF3a43F43StTctCc11AY.230.00007
ORF3a43F43VTtcGtc11AY.230.00007
ORF3a43F43FttCttT11AY.23.10.000417
ORF3a43F43StTctCc11AY.240.000431
ORF3a43F43del1ttCtt-11AY.250.000006
ORF3a43F43VTtcGtc11AY.260.000028
ORF3a43F43StTctCc11AY.270.000065
ORF3a43F43delTTC---11AY.280.00189
ORF3a43F43FttCttT11AY.280.00189
ORF3a43F43delTTC---11AY.29.10.000221
ORF3a43F43VTtcGtc11AY.30.00001
ORF3a43F43LTtcCtc11AY.330.000067
ORF3a43F43YtTctAc11AY.330.000067
ORF3a43F43LTtcCtc11AY.34.10.00051
ORF3a43F43StTctCc11AY.350.000233
ORF3a43F43delTTC---11AY.380.000499
ORF3a43F43YtTctAc11AY.390.000025
ORF3a43F43LTtcCtc11AY.39.20.001541
ORF3a43F43FttCttT11AY.4.30.000842
ORF3a43F43YtTctAc11AY.4.50.000107
ORF3a43F43VTtcGtc11AY.420.00004
ORF3a43F43YtTctAc11AY.430.000004
ORF3a43F43VTtcGtc11AY.460.000104
ORF3a43F43StTctCc11AY.46.40.000165
ORF3a43F43VTtcGtc11AY.50.000021
ORF3a43F43LTtcCtc11AY.5.40.000277
ORF3a43F43StTctCc11AY.5.40.000277
ORF3a43F43FttCttT11AY.500.000799
ORF3a43F43StTctCc11AY.530.000288
ORF3a43F43StTctCc11AY.540.000095
ORF3a43F43delTTC---11AY.540.000095
ORF3a43F43FttCttT11AY.560.001605
ORF3a43F43LTtcCtc11AY.570.000656
ORF3a43F43FttCttT11AY.580.000907
ORF3a43F43delTTC---11AY.590.00053
ORF3a43F43LttCttG11AY.60.000041
ORF3a43F43FttCttT11AY.600.000938
ORF3a43F43CtTctGc11AY.610.000105
ORF3a43F43LTtcCtc11AY.610.000105
ORF3a43F43StTctCc11AY.610.000105
ORF3a43F43FttCttT11AY.620.000436
ORF3a43F43delTTC---11AY.650.000533
ORF3a43F43VTtcGtc11AY.690.000187
ORF3a43F43delTTC---11AY.70.000196
ORF3a43F43LttCttG11AY.7.10.000113
ORF3a43F43FttCttT11AY.7.20.000559
ORF3a43F43StTctCc11AY.750.000056
ORF3a43F43VTtcGtc11AY.75.10.00018
ORF3a43F43delTTC---11AY.75.10.00018
ORF3a43F43FttCttT11AY.860.00083
ORF3a43F43LTtcCtc11AY.9.20.000037
ORF3a43F43delTTC---11AY.900.000684
ORF3a43F43delTTC---11AY.910.00073
ORF3a43F43delTTC---11AY.930.000273
ORF3a43F43LTtcCtc11AY.930.000273
ORF3a43F43LttCttG11AY.950.000761
ORF3a43F43FttCttT11AY.950.000761
ORF3a43F43FttCttT11AY.960.002075
ORF3a43F43StTctCc11AY.98.10.000048
ORF3a43F43FttCttT11AY.990.001049
ORF3a43F43LTtcCtc11AY.990.001049
ORF3a43F43FttCttT11AY.99.10.001553
ORF3a43F43delTTC---11AY.99.20.000092
ORF3a43F43FttCttT11AZ.30.00152
ORF3a43F43FttCttT11AZ.50.003509
ORF3a43F43VTtcGtc11B0.000128
ORF3a43F43delTTC---11B0.000128
ORF3a43F43StTctCc11B0.000128
ORF3a43F43ITtcAtc11B.10.000009
ORF3a43F43CtTctGc11B.10.000009
ORF3a43F43del2TTc--c11B.1.10.000018
ORF3a43F43FttCttT11B.1.1.1150.008929
ORF3a43F43FttCttT11B.1.1.1250.010204
ORF3a43F43FttCttT11B.1.1.1300.015385
ORF3a43F43FttCttT11B.1.1.1380.006061
ORF3a43F43FttCttT11B.1.1.1390.022727
ORF3a43F43FttCttT11B.1.1.1610.003534
ORF3a43F43FttCttT11B.1.1.1650.015385
ORF3a43F43FttCttT11B.1.1.1680.026316
ORF3a43F43delTTC---11B.1.1.1890.001513
ORF3a43F43FttCttT11B.1.1.2000.007463
ORF3a43F43FttCttT11B.1.1.2040.00304
ORF3a43F43StTctCc11B.1.1.2140.000055
ORF3a43F43delTTC---11B.1.1.2140.000055
ORF3a43F43FttCttT11B.1.1.2190.005
ORF3a43F43delTTC---11B.1.1.2250.007194
ORF3a43F43FttCttT11B.1.1.2430.004082
ORF3a43F43LttCttG11B.1.1.2430.004082
ORF3a43F43LttCttA11B.1.1.250.000569
ORF3a43F43FttCttT11B.1.1.2530.002506
ORF3a43F43FttCttT11B.1.1.2550.00303
ORF3a43F43FttCttT11B.1.1.2610.008621
ORF3a43F43FttCttT11B.1.1.2650.003155
ORF3a43F43del2tTCt--11B.1.1.2790.001121
ORF3a43F43FttCttT11B.1.1.2790.001121
ORF3a43F43delTTC---11B.1.1.2790.001121
ORF3a43F43delTTC---11B.1.1.280.000311
ORF3a43F43StTctCc11B.1.1.280.000311
ORF3a43F43CtTctGc11B.1.1.2850.006536
ORF3a43F43FttCttT11B.1.1.2860.002899
ORF3a43F43FttCttT11B.1.1.2880.001916
ORF3a43F43StTctCc11B.1.1.2910.000742
ORF3a43F43FttCttT11B.1.1.30.008696
ORF3a43F43FttCttT11B.1.1.3010.001179
ORF3a43F43LttCttA11B.1.1.3060.000438
ORF3a43F43StTctCc11B.1.1.310.066667
ORF3a43F43YtTctAc11B.1.1.3170.000412
ORF3a43F43VTtcGtc11B.1.1.3170.000412
ORF3a43F43LTtcCtc11B.1.1.3260.001761
ORF3a43F43LTtcCtc11B.1.1.330.000421
ORF3a43F43FttCttT11B.1.1.3440.010753
ORF3a43F43FttCttT11B.1.1.3630.005988
ORF3a43F43FttCttT11B.1.1.3650.005587
ORF3a43F43StTctCc11B.1.1.370.000193
ORF3a43F43FttCttT11B.1.1.3710.010417
ORF3a43F43FttCttT11B.1.1.3740.002375
ORF3a43F43FttCttT11B.1.1.3770.001381
ORF3a43F43FttCttT11B.1.1.3780.007299
ORF3a43F43FttCttT11B.1.1.3890.006061
ORF3a43F43YtTctAc11B.1.1.390.00051
ORF3a43F43CtTctGc11B.1.1.390.00051
ORF3a43F43FttCttT11B.1.1.3980.003226
ORF3a43F43FttCttT11B.1.1.40.002976
ORF3a43F43FttCttT11B.1.1.4070.041667
ORF3a43F43delTTC---11B.1.1.4090.002833
ORF3a43F43FttCttT11B.1.1.4160.000905
ORF3a43F43FttCttT11B.1.1.4290.004608
ORF3a43F43LTtcCtc11B.1.1.4330.001425
ORF3a43F43FttCttT11B.1.1.4420.018519
ORF3a43F43FttCttT11B.1.1.4480.002033
ORF3a43F43FttCttT11B.1.1.4610.012048
ORF3a43F43FttCttT11B.1.1.470.005348
ORF3a43F43FttCttT11B.1.1.4870.005587
ORF3a43F43FttCttT11B.1.1.500.000679
ORF3a43F43FttCttT11B.1.1.5170.006803
ORF3a43F43LttCttA11B.1.1.5190.00004
ORF3a43F43FttCttT11B.1.1.520.012195
ORF3a43F43FttCttT11B.1.1.5210.005348
ORF3a43F43FttCttT11B.1.1.5240.020833
ORF3a43F43FttCttT11B.1.1.540.003021
ORF3a43F43FttCttT11B.1.1.550.012987
ORF3a43F43FttCttT11B.1.1.570.011494
ORF3a43F43FttCttT11B.1.1.580.005376
ORF3a43F43del1Ttc-tc11B.1.1.70.000001
ORF3a43F43del2tTCt--11B.1.1.70.000001
ORF3a43F43FttCttT11B.1.1.830.00271
ORF3a43F43FttCttT11B.1.1.890.006061
ORF3a43F43StTctCc11B.1.1.950.019608
ORF3a43F43FttCttT11B.1.1040.00369
ORF3a43F43FttCttT11B.1.110.30.000718
ORF3a43F43FttCttT11B.1.130.002375
ORF3a43F43FttCttT11B.1.1510.011111
ORF3a43F43delTTC---11B.1.1600.000031
ORF3a43F43FttCttT11B.1.160.160.000929
ORF3a43F43FttCttT11B.1.160.230.004831
ORF3a43F43VTtcGtc11B.1.160.230.004831
ORF3a43F43FttCttT11B.1.160.320.004292
ORF3a43F43FttCttT11B.1.160.330.004425
ORF3a43F43FttCttT11B.1.1640.014925
ORF3a43F43FttCttT11B.1.177.160.000664
ORF3a43F43FttCttT11B.1.177.170.000821
ORF3a43F43StTctCc11B.1.177.180.00116
ORF3a43F43FttCttT11B.1.177.190.001431
ORF3a43F43delTTC---11B.1.177.210.000076
ORF3a43F43StTctCc11B.1.177.230.003236
ORF3a43F43FttCttT11B.1.177.300.002513
ORF3a43F43FttCttT11B.1.177.330.001645
ORF3a43F43FttCttT11B.1.177.450.000381
ORF3a43F43FttCttT11B.1.177.50.001242
ORF3a43F43FttCttT11B.1.177.520.001757
ORF3a43F43delTTC---11B.1.177.60.000977
ORF3a43F43StTctCc11B.1.177.720.00339
ORF3a43F43StTctCc11B.1.177.80.000752
ORF3a43F43FttCttT11B.1.177.830.001481
ORF3a43F43FttCttT11B.1.1950.005025
ORF3a43F43del1Ttc-tc11B.1.20.000009
ORF3a43F43FttCttT11B.1.2030.0625
ORF3a43F43FttCttT11B.1.2140.003663
ORF3a43F43FttCttT11B.1.2150.009615
ORF3a43F43FttCttT11B.1.2200.01087
ORF3a43F43LTtcCtc11B.1.2210.000071
ORF3a43F43StTctCc11B.1.2210.000071
ORF3a43F43LTtcCtc11B.1.2320.000537
ORF3a43F43FttCttT11B.1.2350.002519
ORF3a43F43LTtcCtc11B.1.2350.002519
ORF3a43F43FttCttT11B.1.2360.002053
ORF3a43F43FttCttT11B.1.2370.004975
ORF3a43F43LTtcCtc11B.1.2390.001221
ORF3a43F43delTTC---11B.1.2410.000812
ORF3a43F43FttCttT11B.1.2410.000812
ORF3a43F43StTctCc11B.1.2430.00007
ORF3a43F43FttCttT11B.1.2470.014925
ORF3a43F43FttCttT11B.1.258.120.007874
ORF3a43F43FttCttT11B.1.258.140.00098
ORF3a43F43LTtcCtc11B.1.258.170.000104
ORF3a43F43FttCttT11B.1.258.240.010753
ORF3a43F43FttCttT11B.1.258.60.019608
ORF3a43F43FttCttT11B.1.2650.001271
ORF3a43F43FttCttT11B.1.2810.021739
ORF3a43F43FttCttT11B.1.2930.0125
ORF3a43F43LTtcCtc11B.1.3110.000275
ORF3a43F43LTtcCtc11B.1.3190.003049
ORF3a43F43FttCttT11B.1.3200.001245
ORF3a43F43FttCttT11B.1.3350.010309
ORF3a43F43FttCttT11B.1.3380.008621
ORF3a43F43StTctCc11B.1.3460.001311
ORF3a43F43YtTctAc11B.1.3510.00003
ORF3a43F43LTtcCtc11B.1.3510.00003
ORF3a43F43FttCttT11B.1.351.20.000303
ORF3a43F43StTctCc11B.1.351.30.000876
ORF3a43F43LTtcCtc11B.1.351.50.0006
ORF3a43F43FttCttT11B.1.36.240.006173
ORF3a43F43delTTC---11B.1.36.240.006173
ORF3a43F43FttCttT11B.1.36.280.005747
ORF3a43F43FttCttT11B.1.36.370.002778
ORF3a43F43FttCttT11B.1.362.10.066667
ORF3a43F43FttCttT11B.1.3750.00082
ORF3a43F43LttCttG11B.1.3750.00082
ORF3a43F43StTctCc11B.1.4000.000429
ORF3a43F43FttCttT11B.1.4220.000812
ORF3a43F43FttCttT11B.1.4240.008065
ORF3a43F43LTtcCtc11B.1.4270.00005
ORF3a43F43FttCttT11B.1.428.20.033333
ORF3a43F43FttCttT11B.1.428.30.012821
ORF3a43F43delTTC---11B.1.4290.000024
ORF3a43F43FttCttT11B.1.4340.052632
ORF3a43F43LTtcCtc11B.1.438.10.000107
ORF3a43F43FttCttT11B.1.4590.004082
ORF3a43F43FttCttT11B.1.4620.007246
ORF3a43F43FttCttT11B.1.4650.003802
ORF3a43F43FttCttT11B.1.4740.001901
ORF3a43F43FttCttT11B.1.5030.002488
ORF3a43F43FttCttT11B.1.5080.025641
ORF3a43F43FttCttT11B.1.5130.013889
ORF3a43F43StTctCc11B.1.5260.000024
ORF3a43F43FttCttT11B.1.5320.006211
ORF3a43F43FttCttT11B.1.5350.028571
ORF3a43F43FttCttT11B.1.5420.03125
ORF3a43F43FttCttT11B.1.5430.01
ORF3a43F43FttCttT11B.1.5460.003704
ORF3a43F43FttCttT11B.1.5550.022222
ORF3a43F43FttCttT11B.1.5580.004566
ORF3a43F43FttCttT11B.1.5600.00463
ORF3a43F43FttCttT11B.1.5640.000426
ORF3a43F43FttCttT11B.1.5670.003333
ORF3a43F43FttCttT11B.1.5680.001111
ORF3a43F43FttCttT11B.1.575.10.002439
ORF3a43F43StTctCc11B.1.575.10.002439
ORF3a43F43FttCttT11B.1.5880.00091
ORF3a43F43FttCttT11B.1.5930.01087
ORF3a43F43StTctCc11B.1.5960.000087
ORF3a43F43delTTC---11B.1.5960.000087
ORF3a43F43LttCttA11B.1.5960.000087
ORF3a43F43FttCttT11B.1.6000.005848
ORF3a43F43FttCttT11B.1.6020.006536
ORF3a43F43CtTctGc11B.1.6090.000479
ORF3a43F43YtTctAc11B.1.617.20.000004
ORF3a43F43VTtcGtc11B.1.617.20.000004
ORF3a43F43del1ttCtt-11B.1.617.30.002985
ORF3a43F43FttCttT11B.1.621.10.000506
ORF3a43F43FttCttT11B.1.6270.00202
ORF3a43F43FttCttT11B.1.6310.003367
ORF3a43F43delTTC---11B.1.6380.052632
ORF3a43F43FttCttT11B.1.700.02439
ORF3a43F43FttCttT11B.1.80.001972
ORF3a43F43FttCttT11B.310.003731
ORF3a43F43FttCttT11B.40.002208
ORF3a43F43FttCttT11B.410.008
ORF3a43F43FttCttT11B.520.010101
ORF3a43F43FttCttT11B.550.00295
ORF3a43F43FttCttT11B.60.00091
ORF3a43F43FttCttT11B.6.60.000889
ORF3a43F43LTtcCtc11B.6.60.000889
ORF3a43F43FttCttT11C.180.002591
ORF3a43F43FttCttT11C.190.027027
ORF3a43F43ITtcAtc11C.36.30.000567
ORF3a43F43LTtcCtc11C.370.000116
ORF3a43F43YtTCtAT11C.370.000116
ORF3a43F43FttCttT11C.37.10.002618
ORF3a43F43del2tTCt--11D.20.000075
ORF3a43F43FttCttT11D.30.005917
ORF3a43F43FttCttT11K.30.006173
ORF3a43F43FttCttT11N.40.004255
ORF3a43F43CtTctGc11P.10.000016
ORF3a43F43YtTctAc11P.10.000016
ORF3a43F43StTctCc11P.1.120.000484
ORF3a43F43LttCttA11P.1.140.000048
ORF3a43F43delTTC---11P.1.140.000048
ORF3a43F43StTctCc11P.1.150.000232
ORF3a43F43delTTC---11P.1.150.000232
ORF3a43F43LttCttA11P.1.160.000374
ORF3a43F43delTTC---11P.1.160.000374
ORF3a43F43delTTC---11P.1.60.001946
ORF3a43F43LTtcCtc11P.20.000187
ORF3a43F43FttCttT11P.40.003802
ORF3a43F43FttCttT11P.70.004367
ORF3a43F43LTtcCtc11Q.40.000455
ORF3a43F43FttCttT11Q.40.000455
ORF3a43F43YtTctAc11R.10.00009
ORF3a43F43LTtcCtc11W.30.005263