CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 42 & Codon = cAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a42P42HnonsyncCtcAt50565056125516-25518

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a42P42HcCtcAt50565056All0.000967
ORF3a42P42HcCtcAt46304630B.1.1.70.004145
ORF3a42P42HcCtcAt9595B.1.1.5280.456731
ORF3a42P42HcCtcAt8787AY.40.000135
ORF3a42P42HcCtcAt4747B.1.177.350.032481
ORF3a42P42HcCtcAt2121AY.250.000126
ORF3a42P42HcCtcAt2020B.1.20.000176
ORF3a42P42HcCtcAt1616B.1.617.20.00006
ORF3a42P42HcCtcAt1414B.1.1770.000184
ORF3a42P42HcCtcAt1111AY.99.20.001014
ORF3a42P42HcCtcAt1010B.1.258.170.00104
ORF3a42P42HcCtcAt88B.1.1600.00025
ORF3a42P42HcCtcAt77AY.470.000218
ORF3a42P42HcCtcAt66AY.390.000148
ORF3a42P42HcCtcAt66AY.4.2.10.000894
ORF3a42P42HcCtcAt66AY.430.000027
ORF3a42P42HcCtcAt66AY.440.000037
ORF3a42P42HcCtcAt66B.10.000055
ORF3a42P42HcCtcAt55AY.1180.000313
ORF3a42P42HcCtcAt44AY.50.000083
ORF3a42P42HcCtcAt44B.1.10.000073
ORF3a42P42HcCtcAt33AY.1190.000106
ORF3a42P42HcCtcAt33AY.5.30.001012
ORF3a42P42HcCtcAt33AY.880.002653
ORF3a42P42HcCtcAt33B.1.3510.000089
ORF3a42P42HcCtcAt22AY.330.000134
ORF3a42P42HcCtcAt22AY.4.20.000043
ORF3a42P42HcCtcAt22AY.420.00008
ORF3a42P42HcCtcAt22B.1.4620.014493
ORF3a42P42HcCtcAt11AY.1020.000027
ORF3a42P42HcCtcAt11AY.1030.000006
ORF3a42P42HcCtcAt11AY.1110.000183
ORF3a42P42HcCtcAt11AY.160.00038
ORF3a42P42HcCtcAt11AY.20.000356
ORF3a42P42HcCtcAt11AY.230.00007
ORF3a42P42HcCtcAt11AY.260.000028
ORF3a42P42HcCtcAt11AY.270.000065
ORF3a42P42HcCtcAt11AY.290.000016
ORF3a42P42HcCtcAt11AY.30.00001
ORF3a42P42HcCtcAt11AY.39.10.00004
ORF3a42P42HcCtcAt11AY.910.00073
ORF3a42P42HcCtcAt11B.1.1.1010.01
ORF3a42P42HcCtcAt11B.1.1.3060.000438
ORF3a42P42HcCtcAt11B.1.1.3180.000302
ORF3a42P42HcCtcAt11B.1.1.340.013158
ORF3a42P42HcCtcAt11B.1.1.890.006061
ORF3a42P42HcCtcAt11B.1.177.420.000894
ORF3a42P42HcCtcAt11B.1.2390.001221
ORF3a42P42HcCtcAt11B.1.2580.000067
ORF3a42P42HcCtcAt11B.1.36.180.00042
ORF3a42P42HcCtcAt11B.1.5250.000113
ORF3a42P42HcCtcAt11B.1.5660.019231
ORF3a42P42HcCtcAt11B.1.5960.000087
ORF3a42P42HcCtcAt11B.1.5990.00365
ORF3a42P42HcCtcAt11B.60.00091
ORF3a42P42HcCtcAt11Q.80.000165