CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 41 & Codon = Ttc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a41L41FnonsynCtcTtc11199111960.99973225513-25515

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a41L41FCtcTtc1119611199All0.002141
ORF3a41L41FCtcTtc21852187AY.98.10.105821
ORF3a41L41FCtcTtc18751875AY.40.002918
ORF3a41L41FCtcTtc14301430B.1.1.70.00128
ORF3a41L41FCtcTtc573574B.1.617.20.002158
ORF3a41L41FCtcTtc543543AY.430.002406
ORF3a41L41FCtcTtc511511B.1.6280.180056
ORF3a41L41FCtcTtc395395B.1.20.003478
ORF3a41L41FCtcTtc340340B.1.1770.004477
ORF3a41L41FCtcTtc267267AY.1020.007079
ORF3a41L41FCtcTtc235235AY.440.00143
ORF3a41L41FCtcTtc202202P.10.003182
ORF3a41L41FCtcTtc174174AY.390.0043
ORF3a41L41FCtcTtc147147AY.1200.005465
ORF3a41L41FCtcTtc129129B.10.001182
ORF3a41L41FCtcTtc126126B.1.10.002286
ORF3a41L41FCtcTtc100100B.1.177.270.943396
ORF3a41L41FCtcTtc9393B.1.1.1410.187123
ORF3a41L41FCtcTtc9191AY.250.000547
ORF3a41L41FCtcTtc8888AY.1030.000546
ORF3a41L41FCtcTtc8686AY.30.000855
ORF3a41L41FCtcTtc8585B.1.258.170.008838
ORF3a41L41FCtcTtc6969AY.290.001088
ORF3a41L41FCtcTtc6565B.1.1.2840.006981
ORF3a41L41FCtcTtc6363AY.750.003529
ORF3a41L41FCtcTtc6363B.1.177.440.032693
ORF3a41L41FCtcTtc5757B.1.5630.966102
ORF3a41L41FCtcTtc5353A.2.50.026447
ORF3a41L41FCtcTtc4242B.1.1.2220.008568
ORF3a41L41FCtcTtc4040AY.1190.001412
ORF3a41L41FCtcTtc3434AY.920.009767
ORF3a41L41FCtcTtc3434B.1.5260.000799
ORF3a41L41FCtcTtc3030AY.50.000619
ORF3a41L41FCtcTtc2929AY.260.000821
ORF3a41L41FCtcTtc2828AY.420.001126
ORF3a41L41FCtcTtc2727B.1.6210.00239
ORF3a41L41FCtcTtc2222AY.680.006022
ORF3a41L41FCtcTtc2020B.1.177.810.003786
ORF3a41L41FCtcTtc2020B.1.3510.000595
ORF3a41L41FCtcTtc2020P.1.170.003235
ORF3a41L41FCtcTtc1919AY.4.20.000412
ORF3a41L41FCtcTtc1919B.1.2340.002507
ORF3a41L41FCtcTtc1919B.1.5650.015397
ORF3a41L41FCtcTtc1717B.1.5250.001924
ORF3a41L41FCtcTtc1616AY.470.000498
ORF3a41L41FCtcTtc1515AY.200.000583
ORF3a41L41FCtcTtc1414AY.980.001106
ORF3a41L41FCtcTtc1414B.1.177.210.001071
ORF3a41L41FCtcTtc1313AY.39.10.000515
ORF3a41L41FCtcTtc1313B.1.2580.000865
ORF3a41L41FCtcTtc1313B.1.258.110.005153
ORF3a41L41FCtcTtc1313B.1.360.001897
ORF3a41L41FCtcTtc1212AY.1070.005592
ORF3a41L41FCtcTtc1212AY.540.001144
ORF3a41L41FCtcTtc1212AY.950.009132
ORF3a41L41FCtcTtc1212B.1.5960.001046
ORF3a41L41FCtcTtc1111AY.450.001339
ORF3a41L41FCtcTtc1111B.1.1.2070.013002
ORF3a41L41FCtcTtc1111B.1.2430.000765
ORF3a41L41FCtcTtc1111B.1.3110.00302
ORF3a41L41FCtcTtc1111B.1.5820.005397
ORF3a41L41FCtcTtc1111Q.20.006748
ORF3a41L41FCtcTtc1010B.1.1.5190.000397
ORF3a41L41FCtcTtc1010B.1.1600.000312
ORF3a41L41FCtcTtc99AY.46.20.005718
ORF3a41L41FCtcTtc99C.370.001045
ORF3a41L41FCtcTtc88AY.610.000838
ORF3a41L41FCtcTtc88B.1.1.2140.000444
ORF3a41L41FCtcTtc88B.1.4290.000188
ORF3a41L41FCtcTtc77AY.1130.000997
ORF3a41L41FCtcTtc77AY.330.000467
ORF3a41L41FCtcTtc77AY.5.30.002362
ORF3a41L41FCtcTtc77AY.70.001372
ORF3a41L41FCtcTtc77B.1.177.860.001284
ORF3a41L41FCtcTtc77B.1.36.350.018229
ORF3a41L41FCtcTtc77B.400.00255
ORF3a41L41FCtcTtc77D.20.000525
ORF3a41L41FCtcTtc66AY.230.000418
ORF3a41L41FCtcTtc66AY.9.20.00022
ORF3a41L41FCtcTtc66B.1.1.1870.053097
ORF3a41L41FCtcTtc66B.1.1.3110.002149
ORF3a41L41FCtcTtc66B.1.1950.030151
ORF3a41L41FCtcTtc66B.1.36.170.002964
ORF3a41L41FCtcTtc66B.1.4270.000303
ORF3a41L41FCtcTtc66B.1.438.10.000644
ORF3a41L41FCtcTtc66P.1.70.001916
ORF3a41L41FCtcTtc66P.20.00112
ORF3a41L41FCtcTtc66Q.80.000989
ORF3a41L41FCtcTtc55AY.1000.00023
ORF3a41L41FCtcTtc55AY.1170.000423
ORF3a41L41FCtcTtc55AY.1180.000313
ORF3a41L41FCtcTtc55AY.370.00158
ORF3a41L41FCtcTtc55AY.460.00052
ORF3a41L41FCtcTtc55AY.840.002187
ORF3a41L41FCtcTtc55AY.900.003422
ORF3a41L41FCtcTtc55C.36.20.172414
ORF3a41L41FCtcTtc55P.1.120.00242
ORF3a41L41FCtcTtc55Q.10.000632
ORF3a41L41FCtcTtc44A0.001548
ORF3a41L41FCtcTtc44A.270.006623
ORF3a41L41FCtcTtc44AA.10.028986
ORF3a41L41FCtcTtc44AY.1110.000733
ORF3a41L41FCtcTtc44AY.1210.000541
ORF3a41L41FCtcTtc44AY.4.50.00043
ORF3a41L41FCtcTtc44AY.46.60.000289
ORF3a41L41FCtcTtc44AY.870.003331
ORF3a41L41FCtcTtc44B.1.2210.000284
ORF3a41L41FCtcTtc44B.1.221.10.011628
ORF3a41L41FCtcTtc44P.1.150.000929
ORF3a41L41FCtcTtc33AY.1010.001471
ORF3a41L41FCtcTtc33AY.1100.000338
ORF3a41L41FCtcTtc33AY.1160.00086
ORF3a41L41FCtcTtc33AY.270.000194
ORF3a41L41FCtcTtc33AY.4.40.001227
ORF3a41L41FCtcTtc33AY.740.000347
ORF3a41L41FCtcTtc33AY.9.10.000251
ORF3a41L41FCtcTtc33AY.930.000819
ORF3a41L41FCtcTtc33B.1.1.280.000934
ORF3a41L41FCtcTtc33B.1.1.330.001263
ORF3a41L41FCtcTtc33B.1.1.3690.001339
ORF3a41L41FCtcTtc33B.1.1.4320.003797
ORF3a41L41FCtcTtc33B.1.160.260.007264
ORF3a41L41FCtcTtc33B.1.3460.003932
ORF3a41L41FCtcTtc33B.1.4110.011111
ORF3a41L41FCtcTtc33B.1.5560.022556
ORF3a41L41FCtcTtc33P.1.10.000953
ORF3a41L41FCtcTtc33P.1.100.000808
ORF3a41L41FCtcTtc33P.1.40.00293
ORF3a41L41FCtcTtc22AY.1080.002205
ORF3a41L41FCtcTtc22AY.130.000322
ORF3a41L41FCtcTtc22AY.140.000176
ORF3a41L41FCtcTtc22AY.190.002281
ORF3a41L41FCtcTtc22AY.340.000194
ORF3a41L41FCtcTtc22AY.360.000296
ORF3a41L41FCtcTtc22AY.380.000999
ORF3a41L41FCtcTtc22AY.4.2.10.000298
ORF3a41L41FCtcTtc22AY.5.40.000553
ORF3a41L41FCtcTtc22AY.580.001815
ORF3a41L41FCtcTtc22AY.600.001876
ORF3a41L41FCtcTtc22AY.690.000373
ORF3a41L41FCtcTtc22AY.75.10.000361
ORF3a41L41FCtcTtc22AY.850.000854
ORF3a41L41FCtcTtc22AY.99.20.000184
ORF3a41L41FCtcTtc22B.1.1.1740.006757
ORF3a41L41FCtcTtc22B.1.1.2310.006192
ORF3a41L41FCtcTtc22B.1.1.270.011299
ORF3a41L41FCtcTtc22B.1.1.2940.002532
ORF3a41L41FCtcTtc22B.1.1.3220.017544
ORF3a41L41FCtcTtc22B.1.1.370.000386
ORF3a41L41FCtcTtc22B.1.1.3700.025316
ORF3a41L41FCtcTtc22B.1.1.550.025974
ORF3a41L41FCtcTtc22B.1.1040.00738
ORF3a41L41FCtcTtc22B.1.177.400.010309
ORF3a41L41FCtcTtc22B.1.177.520.003515
ORF3a41L41FCtcTtc22B.1.177.600.000437
ORF3a41L41FCtcTtc22B.1.177.720.00678
ORF3a41L41FCtcTtc22B.1.3490.00143
ORF3a41L41FCtcTtc22B.1.351.20.000605
ORF3a41L41FCtcTtc22B.1.36.290.001035
ORF3a41L41FCtcTtc22B.1.36.380.003284
ORF3a41L41FCtcTtc22B.1.3620.003082
ORF3a41L41FCtcTtc22B.1.3690.00057
ORF3a41L41FCtcTtc22B.1.4360.002058
ORF3a41L41FCtcTtc22B.1.466.20.000782
ORF3a41L41FCtcTtc22B.1.4990.002101
ORF3a41L41FCtcTtc22B.1.5640.000852
ORF3a41L41FCtcTtc22B.1.5950.000522
ORF3a41L41FCtcTtc22B.1.6310.006734
ORF3a41L41FCtcTtc22P.1.140.000096
ORF3a41L41FCtcTtc22R.10.00018
ORF3a41L41FCtcTtc11A.10.000282
ORF3a41L41FCtcTtc11A.190.009434
ORF3a41L41FCtcTtc11A.2.5.10.004808
ORF3a41L41FCtcTtc11AE.60.038462
ORF3a41L41FCtcTtc11AY.1040.001984
ORF3a41L41FCtcTtc11AY.1050.000643
ORF3a41L41FCtcTtc11AY.1090.00074
ORF3a41L41FCtcTtc11AY.110.001339
ORF3a41L41FCtcTtc11AY.120.000316
ORF3a41L41FCtcTtc11AY.120.10.000321
ORF3a41L41FCtcTtc11AY.120.2.10.000498
ORF3a41L41FCtcTtc11AY.160.00038
ORF3a41L41FCtcTtc11AY.3.10.000085
ORF3a41L41FCtcTtc11AY.300.000396
ORF3a41L41FCtcTtc11AY.350.000233
ORF3a41L41FCtcTtc11AY.410.000294
ORF3a41L41FCtcTtc11AY.46.30.000934
ORF3a41L41FCtcTtc11AY.590.00053
ORF3a41L41FCtcTtc11AY.60.000041
ORF3a41L41FCtcTtc11AY.620.000436
ORF3a41L41FCtcTtc11AY.630.000387
ORF3a41L41FCtcTtc11AY.670.000464
ORF3a41L41FCtcTtc11AY.7.10.000113
ORF3a41L41FCtcTtc11AY.700.000209
ORF3a41L41FCtcTtc11AY.710.000475
ORF3a41L41FCtcTtc11AY.760.004831
ORF3a41L41FCtcTtc11AY.860.00083
ORF3a41L41FCtcTtc11AY.880.000884
ORF3a41L41FCtcTtc11AY.90.000068
ORF3a41L41FCtcTtc11AY.990.001049
ORF3a41L41FCtcTtc11AY.99.10.001553
ORF3a41L41FCtcTtc11B.1.1.10.000327
ORF3a41L41FCtcTtc11B.1.1.1350.004695
ORF3a41L41FCtcTtc11B.1.1.1600.02381
ORF3a41L41FCtcTtc11B.1.1.1630.007634
ORF3a41L41FCtcTtc11B.1.1.1700.001247
ORF3a41L41FCtcTtc11B.1.1.2160.00089
ORF3a41L41FCtcTtc11B.1.1.2410.00207
ORF3a41L41FCtcTtc11B.1.1.2910.000742
ORF3a41L41FCtcTtc11B.1.1.3180.000302
ORF3a41L41FCtcTtc11B.1.1.3260.001761
ORF3a41L41FCtcTtc11B.1.1.3850.004464
ORF3a41L41FCtcTtc11B.1.1.3980.003226
ORF3a41L41FCtcTtc11B.1.1.4340.000349
ORF3a41L41FCtcTtc11B.1.1.4630.0625
ORF3a41L41FCtcTtc11B.1.1.500.000679
ORF3a41L41FCtcTtc11B.1.1.5130.012346
ORF3a41L41FCtcTtc11B.1.1.5220.017241
ORF3a41L41FCtcTtc11B.1.1260.001276
ORF3a41L41FCtcTtc11B.1.160.140.002119
ORF3a41L41FCtcTtc11B.1.160.70.002079
ORF3a41L41FCtcTtc11B.1.1620.005025
ORF3a41L41FCtcTtc11B.1.1700.00431
ORF3a41L41FCtcTtc11B.1.177.180.00116
ORF3a41L41FCtcTtc11B.1.177.330.001645
ORF3a41L41FCtcTtc11B.1.177.570.000281
ORF3a41L41FCtcTtc11B.1.177.690.001484
ORF3a41L41FCtcTtc11B.1.177.730.000566
ORF3a41L41FCtcTtc11B.1.177.830.001481
ORF3a41L41FCtcTtc11B.1.214.20.0006
ORF3a41L41FCtcTtc11B.1.2320.000537
ORF3a41L41FCtcTtc11B.1.3260.007576
ORF3a41L41FCtcTtc11B.1.3550.011111
ORF3a41L41FCtcTtc11B.1.3610.001289
ORF3a41L41FCtcTtc11B.1.4220.000812
ORF3a41L41FCtcTtc11B.1.428.30.012821
ORF3a41L41FCtcTtc11B.1.4560.003268
ORF3a41L41FCtcTtc11B.1.4590.004082
ORF3a41L41FCtcTtc11B.1.4800.002488
ORF3a41L41FCtcTtc11B.1.5430.01
ORF3a41L41FCtcTtc11B.1.5440.006024
ORF3a41L41FCtcTtc11B.1.5770.000687
ORF3a41L41FCtcTtc11B.1.5870.001898
ORF3a41L41FCtcTtc11B.1.6020.006536
ORF3a41L41FCtcTtc11B.1.6050.005952
ORF3a41L41FCtcTtc11B.1.6110.04
ORF3a41L41FCtcTtc11B.1.6200.000946
ORF3a41L41FCtcTtc11B.1.6270.00202
ORF3a41L41FCtcTtc11B.1.6370.000073
ORF3a41L41FCtcTtc11B.1.88.10.004808
ORF3a41L41FCtcTtc11B.6.60.000889
ORF3a41L41FCtcTtc11C.360.000911
ORF3a41L41FCtcTtc11N.40.004255
ORF3a41L41FCtcTtc11N.50.001767
ORF3a41L41FCtcTtc11P.1.60.001946
ORF3a41L41FCtcTtc11P.30.001595
ORF3a41L41FCtcTtc11Q.30.000145