CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 41 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a41L41deldelCTC---860860125513-25515

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a41L41delCTC---860860All0.000164
ORF3a41L41delCTC---192192AY.260.005436
ORF3a41L41delCTC---153153B.1.6300.801047
ORF3a41L41delCTC---6969AY.430.000306
ORF3a41L41delCTC---6363B.1.1.70.000056
ORF3a41L41delCTC---5454B.1.177.820.025776
ORF3a41L41delCTC---3636B.1.1770.000474
ORF3a41L41delCTC---3030AY.40.000047
ORF3a41L41delCTC---2626B.1.617.20.000098
ORF3a41L41delCTC---2323B.1.10.000417
ORF3a41L41delCTC---2121AY.250.000126
ORF3a41L41delCTC---1414P.10.000221
ORF3a41L41delCTC---1313AY.98.10.00063
ORF3a41L41delCTC---1111AY.30.000109
ORF3a41L41delCTC---99B.1.2580.000599
ORF3a41L41delCTC---88AY.1030.00005
ORF3a41L41delCTC---77AY.390.000173
ORF3a41L41delCTC---66AY.440.000037
ORF3a41L41delCTC---55B.10.000046
ORF3a41L41delCTC---55B.1.438.10.000536
ORF3a41L41delCTC---44AY.4.20.000087
ORF3a41L41delCTC---44B.1.20.000035
ORF3a41L41delCTC---44P.1.90.019231
ORF3a41L41delCTC---33AY.1200.000112
ORF3a41L41delCTC---33AY.200.000117
ORF3a41L41delCTC---33AY.39.10.000119
ORF3a41L41delCTC---33AY.4.50.000322
ORF3a41L41delCTC---33AY.400.002893
ORF3a41L41delCTC---33AY.450.000365
ORF3a41L41delCTC---33AY.980.000237
ORF3a41L41delCTC---33B.1.160.240.013274
ORF3a41L41delCTC---33B.1.4270.000151
ORF3a41L41delCTC---33U.30.011583
ORF3a41L41delCTC---22AY.130.000322
ORF3a41L41delCTC---22AY.290.000032
ORF3a41L41delCTC---22AY.460.000208
ORF3a41L41delCTC---22AY.46.20.001271
ORF3a41L41delCTC---22AY.60.000082
ORF3a41L41delCTC---22AY.670.000929
ORF3a41L41delCTC---22AY.750.000112
ORF3a41L41delCTC---22AY.810.003984
ORF3a41L41delCTC---22AY.9.20.000073
ORF3a41L41delCTC---22B.1.1.5190.000079
ORF3a41L41delCTC---22B.1.160.330.00885
ORF3a41L41delCTC---22B.1.177.600.000437
ORF3a41L41delCTC---22B.1.4710.005464
ORF3a41L41delCTC---22B.1.5250.000226
ORF3a41L41delCTC---22B.1.6210.000177
ORF3a41L41delCTC---22D.20.00015
ORF3a41L41delCTC---11A.2.30.004739
ORF3a41L41delCTC---11AH.30.003802
ORF3a41L41delCTC---11AY.1020.000027
ORF3a41L41delCTC---11AY.1110.000183
ORF3a41L41delCTC---11AY.1130.000142
ORF3a41L41delCTC---11AY.1140.000231
ORF3a41L41delCTC---11AY.1170.000085
ORF3a41L41delCTC---11AY.1180.000063
ORF3a41L41delCTC---11AY.230.00007
ORF3a41L41delCTC---11AY.280.00189
ORF3a41L41delCTC---11AY.29.10.000221
ORF3a41L41delCTC---11AY.330.000067
ORF3a41L41delCTC---11AY.420.00004
ORF3a41L41delCTC---11AY.50.000021
ORF3a41L41delCTC---11AY.590.00053
ORF3a41L41delCTC---11AY.650.000533
ORF3a41L41delCTC---11AY.70.000196
ORF3a41L41delCTC---11AY.75.10.00018
ORF3a41L41delCTC---11AY.840.000437
ORF3a41L41delCTC---11AY.900.000684
ORF3a41L41delCTC---11AY.910.00073
ORF3a41L41delCTC---11AY.930.000273
ORF3a41L41delCTC---11AY.99.20.000092
ORF3a41L41delCTC---11B0.000128
ORF3a41L41delCTC---11B.1.1.2220.000204
ORF3a41L41delCTC---11B.1.1.2250.007194
ORF3a41L41delCTC---11B.1.1.280.000311
ORF3a41L41delCTC---11B.1.1.330.000421
ORF3a41L41delCTC---11B.1.1.390.00051
ORF3a41L41delCTC---11B.1.1.4090.002833
ORF3a41L41delCTC---11B.1.1600.000031
ORF3a41L41delCTC---11B.1.177.60.000977
ORF3a41L41delCTC---11B.1.2210.000071
ORF3a41L41delCTC---11B.1.2410.000812
ORF3a41L41delCTC---11B.1.5630.016949
ORF3a41L41delCTC---11B.1.6370.000073
ORF3a41L41delCTC---11B.1.6380.052632
ORF3a41L41delCTC---11C.370.000116
ORF3a41L41delCTC---11P.1.140.000048
ORF3a41L41delCTC---11P.1.150.000232
ORF3a41L41delCTC---11P.1.160.000374