CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 29 & Codon = Ttt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a29V29FnonsynGttTtt13691369125477-25479

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a29V29FGttTtt13691369All0.000262
ORF3a29V29FGttTtt377377B.1.1.70.000337
ORF3a29V29FGttTtt8282AY.40.000128
ORF3a29V29FGttTtt6969B.1.3510.002051
ORF3a29V29FGttTtt5858P.10.000914
ORF3a29V29FGttTtt4949B.10.000449
ORF3a29V29FGttTtt4848AY.430.000213
ORF3a29V29FGttTtt4444B.1.5260.001034
ORF3a29V29FGttTtt3939B.1.617.20.000147
ORF3a29V29FGttTtt3535B.1.20.000308
ORF3a29V29FGttTtt3232B.1.4290.000753
ORF3a29V29FGttTtt2828AY.440.00017
ORF3a29V29FGttTtt2727AY.250.000162
ORF3a29V29FGttTtt2727B.1.1770.000356
ORF3a29V29FGttTtt2020AY.1030.000124
ORF3a29V29FGttTtt2020B.1.1.5190.000794
ORF3a29V29FGttTtt1919B.1.416.10.029687
ORF3a29V29FGttTtt1515AY.30.000149
ORF3a29V29FGttTtt1515B.1.177.440.007784
ORF3a29V29FGttTtt1313P.1.160.004863
ORF3a29V29FGttTtt1212AY.50.000248
ORF3a29V29FGttTtt1212B.1.10.000218
ORF3a29V29FGttTtt1212P.1.150.002788
ORF3a29V29FGttTtt1212Q.20.007362
ORF3a29V29FGttTtt1010AY.1020.000265
ORF3a29V29FGttTtt1010AY.98.10.000484
ORF3a29V29FGttTtt1010B.1.3690.002852
ORF3a29V29FGttTtt99B.1.1.2140.000499
ORF3a29V29FGttTtt88A.270.013245
ORF3a29V29FGttTtt88B.1.1.1530.008762
ORF3a29V29FGttTtt88B.1.1.370.001543
ORF3a29V29FGttTtt77B.1.177.570.001967
ORF3a29V29FGttTtt66AY.1180.000376
ORF3a29V29FGttTtt66AY.390.000148
ORF3a29V29FGttTtt66B.1.5580.027397
ORF3a29V29FGttTtt66B.1.5960.000523
ORF3a29V29FGttTtt66P.1.140.000287
ORF3a29V29FGttTtt55A.2.50.002495
ORF3a29V29FGttTtt55AY.4.10.003687
ORF3a29V29FGttTtt55B.1.2430.000348
ORF3a29V29FGttTtt44AY.340.000388
ORF3a29V29FGttTtt44AY.4.20.000087
ORF3a29V29FGttTtt44B.1.1.50.033333
ORF3a29V29FGttTtt44B.1.3400.017167
ORF3a29V29FGttTtt44B.1.5250.000453
ORF3a29V29FGttTtt44B.1.5610.001588
ORF3a29V29FGttTtt44D.20.0003
ORF3a29V29FGttTtt33AY.1200.000112
ORF3a29V29FGttTtt33AY.130.000483
ORF3a29V29FGttTtt33AY.290.000047
ORF3a29V29FGttTtt33AY.330.0002
ORF3a29V29FGttTtt33AY.420.000121
ORF3a29V29FGttTtt33AY.470.000093
ORF3a29V29FGttTtt33AY.980.000237
ORF3a29V29FGttTtt33B.1.1.10.00098
ORF3a29V29FGttTtt33B.1.110.30.002155
ORF3a29V29FGttTtt33B.1.177.210.000229
ORF3a29V29FGttTtt33B.1.351.20.000908
ORF3a29V29FGttTtt33B.1.360.000438
ORF3a29V29FGttTtt33B.1.4260.003027
ORF3a29V29FGttTtt33B.1.438.10.000322
ORF3a29V29FGttTtt22A0.000774
ORF3a29V29FGttTtt22AY.1080.002205
ORF3a29V29FGttTtt22AY.1130.000285
ORF3a29V29FGttTtt22AY.116.10.000623
ORF3a29V29FGttTtt22AY.260.000057
ORF3a29V29FGttTtt22AY.450.000243
ORF3a29V29FGttTtt22AY.9.20.000073
ORF3a29V29FGttTtt22B0.000256
ORF3a29V29FGttTtt22B.1.1.2160.001781
ORF3a29V29FGttTtt22B.1.1.2220.000408
ORF3a29V29FGttTtt22B.1.1.3110.000716
ORF3a29V29FGttTtt22B.1.1.3680.006173
ORF3a29V29FGttTtt22B.1.1.4200.002012
ORF3a29V29FGttTtt22B.1.1.530.027397
ORF3a29V29FGttTtt22B.1.2400.000431
ORF3a29V29FGttTtt22B.1.258.110.000793
ORF3a29V29FGttTtt22B.1.5820.000981
ORF3a29V29FGttTtt22B.1.5950.000522
ORF3a29V29FGttTtt22B.1.6350.035088
ORF3a29V29FGttTtt22C.36.30.001134
ORF3a29V29FGttTtt22C.370.000232
ORF3a29V29FGttTtt22N.40.008511
ORF3a29V29FGttTtt11A.23.10.000704
ORF3a29V29FGttTtt11AY.10.000396
ORF3a29V29FGttTtt11AY.1140.000231
ORF3a29V29FGttTtt11AY.1160.000287
ORF3a29V29FGttTtt11AY.1170.000085
ORF3a29V29FGttTtt11AY.1190.000035
ORF3a29V29FGttTtt11AY.140.000088
ORF3a29V29FGttTtt11AY.160.00038
ORF3a29V29FGttTtt11AY.200.000039
ORF3a29V29FGttTtt11AY.270.000065
ORF3a29V29FGttTtt11AY.320.000532
ORF3a29V29FGttTtt11AY.4.30.000842
ORF3a29V29FGttTtt11AY.46.20.000635
ORF3a29V29FGttTtt11AY.46.60.000072
ORF3a29V29FGttTtt11AY.490.003195
ORF3a29V29FGttTtt11AY.530.000288
ORF3a29V29FGttTtt11AY.540.000095
ORF3a29V29FGttTtt11AY.60.000041
ORF3a29V29FGttTtt11AY.770.001127
ORF3a29V29FGttTtt11AY.820.001357
ORF3a29V29FGttTtt11AY.870.000833
ORF3a29V29FGttTtt11AY.99.10.001553
ORF3a29V29FGttTtt11B.1.1.1600.02381
ORF3a29V29FGttTtt11B.1.1.1640.005155
ORF3a29V29FGttTtt11B.1.1.1700.001247
ORF3a29V29FGttTtt11B.1.1.250.000569
ORF3a29V29FGttTtt11B.1.1.2580.003257
ORF3a29V29FGttTtt11B.1.1.2690.001353
ORF3a29V29FGttTtt11B.1.1.280.000311
ORF3a29V29FGttTtt11B.1.1.2840.000107
ORF3a29V29FGttTtt11B.1.1.2970.002237
ORF3a29V29FGttTtt11B.1.1.3150.008475
ORF3a29V29FGttTtt11B.1.1.3280.016949
ORF3a29V29FGttTtt11B.1.1.3970.002252
ORF3a29V29FGttTtt11B.1.1.4860.001577
ORF3a29V29FGttTtt11B.1.1.710.006061
ORF3a29V29FGttTtt11B.1.1600.000031
ORF3a29V29FGttTtt11B.1.177.320.00135
ORF3a29V29FGttTtt11B.1.177.330.001645
ORF3a29V29FGttTtt11B.1.177.420.000894
ORF3a29V29FGttTtt11B.1.177.50.001242
ORF3a29V29FGttTtt11B.1.177.650.000665
ORF3a29V29FGttTtt11B.1.177.70.000165
ORF3a29V29FGttTtt11B.1.177.730.000566
ORF3a29V29FGttTtt11B.1.177.820.000477
ORF3a29V29FGttTtt11B.1.177.830.001481
ORF3a29V29FGttTtt11B.1.2180.005155
ORF3a29V29FGttTtt11B.1.2340.000132
ORF3a29V29FGttTtt11B.1.2390.001221
ORF3a29V29FGttTtt11B.1.258.170.000104
ORF3a29V29FGttTtt11B.1.258.220.002667
ORF3a29V29FGttTtt11B.1.3130.006579
ORF3a29V29FGttTtt11B.1.36.260.002857
ORF3a29V29FGttTtt11B.1.36.80.001
ORF3a29V29FGttTtt11B.1.3950.007042
ORF3a29V29FGttTtt11B.1.3960.000706
ORF3a29V29FGttTtt11B.1.4040.001302
ORF3a29V29FGttTtt11B.1.4270.00005
ORF3a29V29FGttTtt11B.1.466.20.000391
ORF3a29V29FGttTtt11B.1.5090.000866
ORF3a29V29FGttTtt11B.1.5730.006098
ORF3a29V29FGttTtt11B.1.617.10.000129
ORF3a29V29FGttTtt11B.1.6210.000089
ORF3a29V29FGttTtt11B.1.621.10.000506
ORF3a29V29FGttTtt11B.1.6280.000352
ORF3a29V29FGttTtt11B.1.6370.000073
ORF3a29V29FGttTtt11B.280.003279
ORF3a29V29FGttTtt11B.60.00091
ORF3a29V29FGttTtt11B.6.80.008264
ORF3a29V29FGttTtt11C.37.10.002618
ORF3a29V29FGttTtt11N.10.016949
ORF3a29V29FGttTtt11P.1.130.000898
ORF3a29V29FGttTtt11P.1.40.000977
ORF3a29V29FGttTtt11Q.80.000165
ORF3a29V29FGttTtt11R.10.00009