CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 28 & Codon = ttC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a28F28FsynttTttC240240125474-25476

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a28F28FttTttC240240All0.000046
ORF3a28F28FttTttC7171AY.39.10.002813
ORF3a28F28FttTttC3535AY.40.000054
ORF3a28F28FttTttC3535B.1.1.70.000031
ORF3a28F28FttTttC2929B.1.617.20.000109
ORF3a28F28FttTttC1111AY.850.004699
ORF3a28F28FttTttC88AY.430.000035
ORF3a28F28FttTttC77AY.630.002708
ORF3a28F28FttTttC44AY.250.000024
ORF3a28F28FttTttC44B.1.1770.000053
ORF3a28F28FttTttC44B.1.2320.002149
ORF3a28F28FttTttC33B.1.20.000026
ORF3a28F28FttTttC220.111111
ORF3a28F28FttTttC22AY.410.000588
ORF3a28F28FttTttC22B.1.10.000036
ORF3a28F28FttTttC22D.20.00015
ORF3a28F28FttTttC11A.2.20.001689
ORF3a28F28FttTttC11AY.1030.000006
ORF3a28F28FttTttC11AY.1100.000113
ORF3a28F28FttTttC11AY.1200.000037
ORF3a28F28FttTttC11AY.130.000161
ORF3a28F28FttTttC11AY.230.00007
ORF3a28F28FttTttC11AY.260.000028
ORF3a28F28FttTttC11AY.30.00001
ORF3a28F28FttTttC11AY.340.000097
ORF3a28F28FttTttC11AY.360.000148
ORF3a28F28FttTttC11AY.390.000025
ORF3a28F28FttTttC11AY.420.00004
ORF3a28F28FttTttC11AY.440.000006
ORF3a28F28FttTttC11AY.650.000533
ORF3a28F28FttTttC11AY.740.000116
ORF3a28F28FttTttC11AY.920.000287
ORF3a28F28FttTttC11B.1.1.1760.000439
ORF3a28F28FttTttC11B.1.1600.000031
ORF3a28F28FttTttC11B.1.36.180.00042
ORF3a28F28FttTttC11B.1.4130.004255
ORF3a28F28FttTttC11B.1.780.008547