CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 258

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a258P258deldelCCA---35053505126164-26166
ORF3a258P258LnonsyncCacTa7737690.99482526164-26166
ORF3a258P258LnonsynCCaTTa77320.0025873226164-26166
ORF3a258P258LnonsyncCAcTG77320.0025873226164-26166
ORF3a258P258SnonsynCcaTca5225210.99808426164-26166
ORF3a258P258SnonsynCcATcC52210.0019157126164-26166
ORF3a258P258QnonsyncCacAa391391126164-26166
ORF3a258P258PsynccAccT3652500.68493226164-26166
ORF3a258P258PsynccAccG3651030.28219226164-26166
ORF3a258P258PsynccAccC365120.032876726164-26166
ORF3a258P258TnonsynCcaAca82810.98780526164-26166
ORF3a258P258TnonsynCcAAcG8210.012195126164-26166
ORF3a258P258RnonsyncCacGa2626126164-26166
ORF3a258P258XnonsynCCaTAa2626126164-26166
ORF3a258P258AnonsynCcaGca1212126164-26166
ORF3a258P258del2delcCAc--1150.45454526164-26166
ORF3a258P258del1delCCA-NN1150.45454526164-26166
ORF3a258P258del1delCca-ca1130.27272726164-26166
ORF3a258P258del1delccAcc-1130.27272726164-26166
ORF3a258P258del2delCCA--N1130.27272726164-26166
ORF3a258P258del2delCCAT--1120.18181826164-26166
ORF3a258P258del2delCCa--a1110.090909126164-26166
ORF3a258P258GnonsynCCAGGG1080.826164-26166
ORF3a258P258GnonsynCCaGGa1020.226164-26166
ORF3a258P258YnonsynCCATAT22126164-26166
ORF3a258P258DnonsynCCAGAT11126164-26166

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a258P258delCCA---35053505All0.00067
ORF3a258P258LcCacTa769773All0.000147
ORF3a258P258LCCaTTa2773All0
ORF3a258P258LcCAcTG2773All0
ORF3a258P258delCCA---529529B.1.1.70.000474
ORF3a258P258delCCA---523523A.270.865894
ORF3a258P258SCcaTca521522All0.0001
ORF3a258P258SCcATcC1522All0
ORF3a258P258QcCacAa391391All0.000075
ORF3a258P258delCCA---366366AY.40.00057
ORF3a258P258PccAccT250365All0.000048
ORF3a258P258PccAccG103365All0.00002
ORF3a258P258PccAccC12365All0.000002
ORF3a258P258QcCacAa338338B.1.1.70.000303
ORF3a258P258SCcaTca232232B.10.002125
ORF3a258P258delCCA---194194B.1.617.20.00073
ORF3a258P258delCCA---162162AY.430.000718
ORF3a258P258delCCA---161161AY.1030.001
ORF3a258P258delCCA---154154AY.4.20.00334
ORF3a258P258LcCacTa131131AY.40.000204
ORF3a258P258delCCA---123123AY.260.003482
ORF3a258P258LcCacTa112112B.1.1.70.0001
ORF3a258P258delCCA---111111B.10.001017
ORF3a258P258LcCacTa9494B.1.1600.002932
ORF3a258P258delCCA---9191AY.250.000547
ORF3a258P258delCCA---8686AY.440.000523
ORF3a258P258PccAccT8283AY.1030.000509
ORF3a258P258PccAccG183AY.1030.000006
ORF3a258P258TCcaAca8182All0.000015
ORF3a258P258TCcAAcG182All0
ORF3a258P258PccAccT7882AY.440.000475
ORF3a258P258PccAccG382AY.440.000018
ORF3a258P258PccAccC182AY.440.000006
ORF3a258P258LcCacTa7676B.1.617.20.000286
ORF3a258P258delCCA---6565B.1.20.000572
ORF3a258P258delCCA---6060AY.30.000597
ORF3a258P258delCCA---5555B.1.5170.023484
ORF3a258P258PccAccG2544B.1.1.70.000022
ORF3a258P258PccAccT1944B.1.1.70.000017
ORF3a258P258delCCA---4141AY.750.002297
ORF3a258P258LcCacTa4040B.1.1.3180.01207
ORF3a258P258LcCacTa3636AY.440.000219
ORF3a258P258LcCacTa3434AY.1000.001564
ORF3a258P258SCcaTca3434AY.40.000053
ORF3a258P258delCCA---3333AY.470.001026
ORF3a258P258delCCA---3232B.1.1770.000421
ORF3a258P258delCCA---2828B.1.6210.002479
ORF3a258P258delCCA---2727AY.130.004346
ORF3a258P258SCcaTca2727B.1.1.70.000024
ORF3a258P258XCCaTAa2626All0.000005
ORF3a258P258RcCacGa2626All0.000005
ORF3a258P258SCcaTca2626B.1.617.20.000098
ORF3a258P258delCCA---2424AY.390.000593
ORF3a258P258LcCacTa2424B.1.20.000211
ORF3a258P258delCCA---2323AY.290.000363
ORF3a258P258SCcaTca2323B.1.6210.002036
ORF3a258P258delCCA---2121AY.50.000434
ORF3a258P258LcCacTa2121AY.750.001176
ORF3a258P258delCCA---2121B.1.1.5190.000834
ORF3a258P258delCCA---2121B.1.177.210.001606
ORF3a258P258LcCacTa2020AY.250.00012
ORF3a258P258delCCA---2020AY.510.018182
ORF3a258P258LcCacTa1818AY.1030.000112
ORF3a258P258delCCA---1818B.1.1600.000561
ORF3a258P258PccAccT1518B.1.617.20.000056
ORF3a258P258PccAccG218B.1.617.20.000008
ORF3a258P258PccAccC118B.1.617.20.000004
ORF3a258P258QcCacAa1818B.1.6210.001593
ORF3a258P258delCCA---1717AY.39.10.000673
ORF3a258P258delCCA---1717AY.710.008076
ORF3a258P258XCCaTAa1717B.1.6210.001505
ORF3a258P258delCCA---1616AY.1020.000424
ORF3a258P258delCCA---1616B.1.4290.000376
ORF3a258P258PccAccG1216B.1.4290.000282
ORF3a258P258PccAccT416B.1.4290.000094
ORF3a258P258SCcaTca1616B.1.6270.032323
ORF3a258P258SCcaTca1515AY.1130.002136
ORF3a258P258TCcaAca1515B.1.1.70.000013
ORF3a258P258delCCA---1515B.1.5260.000353
ORF3a258P258PccAccG1414AY.120.004425
ORF3a258P258PccAccT1014AY.40.000016
ORF3a258P258PccAccG414AY.40.000006
ORF3a258P258SCcaTca1414AY.440.000085
ORF3a258P258SCcaTca1313B.1.3510.000386
ORF3a258P258delCCA---1313B.1.6370.00095
ORF3a258P258delCCA---1313P.10.000205
ORF3a258P258ACcaGca1212All0.000002
ORF3a258P258PccAccG1212AY.430.000053
ORF3a258P258delCCA---1212AY.910.008766
ORF3a258P258LcCacTa1212B.1.4290.000282
ORF3a258P258del2cCAc--511All0.000001
ORF3a258P258del1CCA-NN511All0.000001
ORF3a258P258del2CCA--N311All0.000001
ORF3a258P258del1Cca-ca311All0.000001
ORF3a258P258del1ccAcc-311All0.000001
ORF3a258P258del2CCAT--211All0
ORF3a258P258del2CCa--a111All0
ORF3a258P258delCCA---1111AY.1180.000689
ORF3a258P258PccAccG911AY.450.001095
ORF3a258P258PccAccT211AY.450.000243
ORF3a258P258SCcaTca1111B.1.4270.000555
ORF3a258P258GCCAGGG810All0.000002
ORF3a258P258GCCaGGa210All0
ORF3a258P258RcCacGa1010AY.40.000016
ORF3a258P258LcCacTa1010AY.420.000402
ORF3a258P258LcCacTa810AY.430.000035
ORF3a258P258LcCAcTG210AY.430.000009
ORF3a258P258delCCA---1010AY.90.000676
ORF3a258P258delCCA---1010B.1.3510.000297
ORF3a258P258delCCA---99A0.003483
ORF3a258P258GCCAGGG79A.270.011589
ORF3a258P258GCCaGGa29A.270.003311
ORF3a258P258LcCacTa99AY.1200.000335
ORF3a258P258LcCacTa99B.1.10.000163
ORF3a258P258delCCA---99B.1.3110.002471
ORF3a258P258LcCacTa88AY.1020.000212
ORF3a258P258delCCA---88AY.3.10.000682
ORF3a258P258TCcaAca88AY.370.002528
ORF3a258P258delCCA---88AY.420.000322
ORF3a258P258SCcaTca88AY.430.000035
ORF3a258P258LcCacTa88B.10.000073
ORF3a258P258delCCA---88B.1.1.2820.093023
ORF3a258P258delCCA---88B.1.2210.000568
ORF3a258P258XCCaTAa77AY.1130.000997
ORF3a258P258QcCacAa77AY.1130.000997
ORF3a258P258ACcaGca77AY.1200.00026
ORF3a258P258delCCA---77AY.70.001372
ORF3a258P258delCCA---77AY.98.10.000339
ORF3a258P258delCCA---77B.1.1.3720.004821
ORF3a258P258delCCA---77B.1.177.110.011885
ORF3a258P258TCcaAca77B.1.617.20.000026
ORF3a258P258delCCA---77P.20.001306
ORF3a258P258TCcaAca66AY.1030.000037
ORF3a258P258SCcaTca66AY.1030.000037
ORF3a258P258delCCA---66AY.1130.000854
ORF3a258P258delCCA---66AY.200.000233
ORF3a258P258QcCacAa66AY.40.000009
ORF3a258P258PccAccT36AY.4.20.000065
ORF3a258P258PccAccC26AY.4.20.000043
ORF3a258P258PccAccG16AY.4.20.000022
ORF3a258P258delCCA---66AY.46.40.000987
ORF3a258P258delCCA---66AY.99.20.000553
ORF3a258P258delCCA---66B0.000767
ORF3a258P258PccAccT46B.10.000037
ORF3a258P258PccAccG26B.10.000018
ORF3a258P258SCcaTca66B.1.20.000053
ORF3a258P258LcCacTa66B.1.3200.007472
ORF3a258P258delCCA---66B.1.3890.006012
ORF3a258P258LcCacTa66B.1.4270.000303
ORF3a258P258SCcaTca66B.1.4290.000141
ORF3a258P258delCCA---66B.1.5250.000679
ORF3a258P258delCCA---66B.1.5960.000523
ORF3a258P258delCCA---55AY.1190.000177
ORF3a258P258PccAccT35AY.30.00003
ORF3a258P258PccAccG25AY.30.00002
ORF3a258P258TCcaAca55AY.40.000008
ORF3a258P258delCCA---55AY.60.000206
ORF3a258P258delCCA---55AY.980.000395
ORF3a258P258LcCacTa55B.1.1.5190.000199
ORF3a258P258del2CCA--N35B.1.1.70.000003
ORF3a258P258del2cCAc--15B.1.1.70.000001
ORF3a258P258del2CCa--a15B.1.1.70.000001
ORF3a258P258LcCacTa55B.1.177.40.001055
ORF3a258P258delCCA---55B.1.4270.000252
ORF3a258P258SCcaTca55B.1.5170.002135
ORF3a258P258delCCA---55R.10.00045
ORF3a258P258delCCA---440.222222
ORF3a258P258delCCA---44AY.1000.000184
ORF3a258P258delCCA---44AY.1170.000338
ORF3a258P258delCCA---44AY.120.10.001284
ORF3a258P258SCcaTca44AY.250.000024
ORF3a258P258TCcaAca44AY.430.000018
ORF3a258P258delCCA---44AY.450.000487
ORF3a258P258TCcaAca44AY.46.60.000289
ORF3a258P258LcCacTa44AY.50.000083
ORF3a258P258delCCA---44AY.530.00115
ORF3a258P258SCcaTca44AY.9.10.000335
ORF3a258P258delCCA---44B.1.10.000073
ORF3a258P258RcCacGa44B.1.1.70.000004
ORF3a258P258delCCA---44B.1.2340.000528
ORF3a258P258delCCA---44B.1.2430.000278
ORF3a258P258del2cCAc--44B.1.4290.000094
ORF3a258P258QcCacAa44D.20.0003
ORF3a258P258LcCacTa44P.10.000063
ORF3a258P258QcCacAa44P.1.150.000929
ORF3a258P258delCCA---44P.1.160.001496
ORF3a258P258delCCA---44Q.80.00066
ORF3a258P258delCCA---33A.290.015957
ORF3a258P258PccAccT33AY.1020.00008
ORF3a258P258delCCA---33AY.1160.00086
ORF3a258P258delCCA---33AY.120.000948
ORF3a258P258delCCA---33AY.1200.000112
ORF3a258P258SCcaTca33AY.3.10.000256
ORF3a258P258LcCacTa33AY.390.000074
ORF3a258P258PccAccG23AY.390.000049
ORF3a258P258PccAccT13AY.390.000025
ORF3a258P258RcCacGa33AY.39.10.000119
ORF3a258P258SCcaTca33AY.4.20.000065
ORF3a258P258delCCA---33AY.5.30.001012
ORF3a258P258delCCA---33AY.610.000314
ORF3a258P258delCCA---33AY.9.20.00011
ORF3a258P258PccAccT33AZ.50.010526
ORF3a258P258delCCA---33B.1.1.10.00098
ORF3a258P258delCCA---33B.1.1.1890.004539
ORF3a258P258LcCacTa33B.1.1770.00004
ORF3a258P258TCcaAca33B.1.1770.00004
ORF3a258P258delCCA---33B.1.177.40.000633
ORF3a258P258delCCA---33B.1.177.70.000495
ORF3a258P258PccAccT23B.1.20.000018
ORF3a258P258PccAccG13B.1.20.000009
ORF3a258P258LcCacTa33B.1.2410.002435
ORF3a258P258delCCA---33B.1.2580.0002
ORF3a258P258delCCA---33B.1.258.110.001189
ORF3a258P258PccAccC33B.1.3110.000824
ORF3a258P258SCcaTca33B.1.360.000438
ORF3a258P258TCcaAca33B.1.4290.000071
ORF3a258P258PccAccG33B.1.5170.001281
ORF3a258P258SCcaTca33B.1.5900.013636
ORF3a258P258delCCA---33B.1.621.10.001517
ORF3a258P258delCCA---33C.260.022059
ORF3a258P258delCCA---33C.370.000348
ORF3a258P258LcCacTa33D.20.000225
ORF3a258P258SCcaTca33P.20.00056
ORF3a258P258YCCATAT220.111111
ORF3a258P258SCcaTca120.055556
ORF3a258P258SCcATcC120.055556
ORF3a258P258YCCATAT22All0
ORF3a258P258LcCacTa22AY.1170.000169
ORF3a258P258LcCacTa22AY.1180.000125
ORF3a258P258PccAccG22AY.1190.000071
ORF3a258P258SCcaTca22AY.1200.000074
ORF3a258P258delCCA---22AY.1210.000271
ORF3a258P258delCCA---22AY.140.000176
ORF3a258P258TCcaAca22AY.200.000078
ORF3a258P258RcCacGa22AY.230.000139
ORF3a258P258PccAccT22AY.250.000012
ORF3a258P258LcCacTa22AY.290.000032
ORF3a258P258LcCacTa22AY.30.00002
ORF3a258P258SCcaTca22AY.30.00002
ORF3a258P258delCCA---22AY.350.000466
ORF3a258P258delCCA---22AY.360.000296
ORF3a258P258QcCacAa22AY.390.000049
ORF3a258P258LcCacTa22AY.4.20.000043
ORF3a258P258PccAccT22AY.420.00008
ORF3a258P258PccAccT22AY.46.40.000329
ORF3a258P258TCcaAca22AY.590.001059
ORF3a258P258LcCacTa22AY.610.00021
ORF3a258P258PccAccT22AY.610.00021
ORF3a258P258SCcaTca22AY.690.000373
ORF3a258P258delCCA---22AY.75.10.000361
ORF3a258P258PccAccT22AY.9.20.000073
ORF3a258P258delCCA---22AY.970.003401
ORF3a258P258delCCA---22AY.990.002099
ORF3a258P258ACcaGca22B.10.000018
ORF3a258P258QcCacAa22B.10.000018
ORF3a258P258del1ccAcc-12B.10.000009
ORF3a258P258del1Cca-ca12B.10.000009
ORF3a258P258TCcaAca12B.1.10.000018
ORF3a258P258TCcAAcG12B.1.10.000018
ORF3a258P258TCcaAca22B.1.1.2140.000111
ORF3a258P258delCCA---22B.1.1.2160.001781
ORF3a258P258delCCA---22B.1.1.2300.018349
ORF3a258P258LCCaTTa22B.1.1.280.000622
ORF3a258P258delCCA---22B.1.1.3170.000823
ORF3a258P258SCcaTca22B.1.1.3750.02381
ORF3a258P258delCCA---22B.1.1.4340.000697
ORF3a258P258del1ccAcc-12B.1.1.70.000001
ORF3a258P258del1CCA-NN12B.1.1.70.000001
ORF3a258P258delCCA---22B.1.160.160.001859
ORF3a258P258PccAccG22B.1.177.40.000422
ORF3a258P258delCCA---22B.1.177.620.002384
ORF3a258P258SCcaTca22B.1.214.20.001199
ORF3a258P258LcCacTa22B.1.2390.002442
ORF3a258P258delCCA---22B.1.36.10.002281
ORF3a258P258SCcaTca22B.1.4220.001625
ORF3a258P258LcCacTa22B.1.4410.019231
ORF3a258P258TCcaAca22B.1.5260.000047
ORF3a258P258TCcaAca22B.1.6210.000177
ORF3a258P258SCcaTca22B.1.80.003945
ORF3a258P258LcCacTa22B.1.90.012346
ORF3a258P258LcCacTa22B.400.000729
ORF3a258P258TCcaAca22C.160.002121
ORF3a258P258RcCacGa22P.10.000032
ORF3a258P258delCCA---22P.1.100.000539
ORF3a258P258LcCacTa22P.1.140.000096
ORF3a258P258delCCA---22Q.10.000253
ORF3a258P258PccAccC110.055556
ORF3a258P258GCCAGGG11A0.000387
ORF3a258P258delCCA---11A.10.000282
ORF3a258P258delCCA---11A.20.000662
ORF3a258P258del1Cca-ca11A.2.50.000499
ORF3a258P258SCcaTca11A.2.5.10.004808
ORF3a258P258delCCA---11A.210.00277
ORF3a258P258del1CCA-NN11A.270.001656
ORF3a258P258PccAccT11AE.80.000489
ORF3a258P258DCCAGAT11All0
ORF3a258P258delCCA---11AU.10.001266
ORF3a258P258delCCA---11AV.10.005051
ORF3a258P258SCcaTca11AY.1000.000046
ORF3a258P258delCCA---11AY.1010.00049
ORF3a258P258SCcaTca11AY.1010.00049
ORF3a258P258SCcaTca11AY.1020.000027
ORF3a258P258RcCacGa11AY.1030.000006
ORF3a258P258delCCA---11AY.1070.000466
ORF3a258P258PccAccG11AY.1070.000466
ORF3a258P258delCCA---11AY.1090.00074
ORF3a258P258delCCA---11AY.1110.000183
ORF3a258P258SCcaTca11AY.1170.000085
ORF3a258P258QcCacAa11AY.1170.000085
ORF3a258P258XCCaTAa11AY.1170.000085
ORF3a258P258LcCacTa11AY.1190.000035
ORF3a258P258SCcaTca11AY.1190.000035
ORF3a258P258delCCA---11AY.120.2.10.000498
ORF3a258P258PccAccG11AY.140.000088
ORF3a258P258delCCA---11AY.160.00038
ORF3a258P258SCcaTca11AY.190.00114
ORF3a258P258delCCA---11AY.20.000356
ORF3a258P258LcCacTa11AY.200.000039
ORF3a258P258PccAccG11AY.200.000039
ORF3a258P258delCCA---11AY.210.001898
ORF3a258P258PccAccT11AY.230.00007
ORF3a258P258SCcaTca11AY.23.10.000417
ORF3a258P258PccAccC11AY.23.10.000417
ORF3a258P258delCCA---11AY.240.000431
ORF3a258P258del1CCA-NN11AY.250.000006
ORF3a258P258RcCacGa11AY.250.000006
ORF3a258P258SCcaTca11AY.260.000028
ORF3a258P258QcCacAa11AY.260.000028
ORF3a258P258XCCaTAa11AY.260.000028
ORF3a258P258LcCacTa11AY.270.000065
ORF3a258P258PccAccG11AY.270.000065
ORF3a258P258delCCA---11AY.29.10.000221
ORF3a258P258del2CCAT--11AY.30.00001
ORF3a258P258delCCA---11AY.300.000396
ORF3a258P258delCCA---11AY.320.000532
ORF3a258P258SCcaTca11AY.330.000067
ORF3a258P258TCcaAca11AY.330.000067
ORF3a258P258LcCacTa11AY.330.000067
ORF3a258P258delCCA---11AY.340.000097
ORF3a258P258PccAccT11AY.360.000148
ORF3a258P258delCCA---11AY.380.000499
ORF3a258P258RcCacGa11AY.390.000025
ORF3a258P258SCcaTca11AY.390.000025
ORF3a258P258LcCacTa11AY.39.10.00004
ORF3a258P258PccAccC11AY.39.10.00004
ORF3a258P258del1CCA-NN11AY.4.20.000022
ORF3a258P258TCcaAca11AY.4.20.000022
ORF3a258P258delCCA---11AY.4.2.10.000149
ORF3a258P258delCCA---11AY.4.50.000107
ORF3a258P258DCCAGAT11AY.440.000006
ORF3a258P258QcCacAa11AY.440.000006
ORF3a258P258SCcaTca11AY.450.000122
ORF3a258P258LcCacTa11AY.46.40.000165
ORF3a258P258del1CCA-NN11AY.470.000031
ORF3a258P258SCcaTca11AY.50.000021
ORF3a258P258SCcaTca11AY.5.30.000337
ORF3a258P258LcCacTa11AY.500.000799
ORF3a258P258delCCA---11AY.540.000095
ORF3a258P258delCCA---11AY.590.00053
ORF3a258P258SCcaTca11AY.640.000595
ORF3a258P258delCCA---11AY.650.000533
ORF3a258P258PccAccC11AY.650.000533
ORF3a258P258LcCacTa11AY.670.000464
ORF3a258P258delCCA---11AY.670.000464
ORF3a258P258delCCA---11AY.680.000274
ORF3a258P258TCcaAca11AY.7.10.000113
ORF3a258P258SCcaTca11AY.740.000116
ORF3a258P258delCCA---11AY.740.000116
ORF3a258P258TCcaAca11AY.750.000056
ORF3a258P258SCcaTca11AY.75.10.00018
ORF3a258P258LcCacTa11AY.75.10.00018
ORF3a258P258LcCacTa11AY.770.001127
ORF3a258P258delCCA---11AY.80.000606
ORF3a258P258SCcaTca11AY.820.001357
ORF3a258P258delCCA---11AY.870.000833
ORF3a258P258TCcaAca11AY.9.10.000084
ORF3a258P258delCCA---11AY.9.10.000084
ORF3a258P258delCCA---11AY.920.000287
ORF3a258P258SCcaTca11AY.99.20.000092
ORF3a258P258delCCA---11AZ.20.000821
ORF3a258P258TCcaAca11B.10.000009
ORF3a258P258PccAccG11B.1.10.000018
ORF3a258P258SCcaTca11B.1.10.000018
ORF3a258P258PccAccT11B.1.1.100.001115
ORF3a258P258PccAccT11B.1.1.1410.002012
ORF3a258P258SCcaTca11B.1.1.1700.001247
ORF3a258P258LcCacTa11B.1.1.1860.003436
ORF3a258P258delCCA---11B.1.1.2140.000055
ORF3a258P258LcCacTa11B.1.1.2140.000055
ORF3a258P258PccAccG11B.1.1.2220.000204
ORF3a258P258delCCA---11B.1.1.2220.000204
ORF3a258P258LcCacTa11B.1.1.250.000569
ORF3a258P258delCCA---11B.1.1.250.000569
ORF3a258P258SCcaTca11B.1.1.2790.001121
ORF3a258P258delCCA---11B.1.1.2850.006536
ORF3a258P258SCcaTca11B.1.1.2910.000742
ORF3a258P258LcCacTa11B.1.1.3030.002762
ORF3a258P258delCCA---11B.1.1.330.000421
ORF3a258P258delCCA---11B.1.1.3510.002793
ORF3a258P258delCCA---11B.1.1.40.002976
ORF3a258P258delCCA---11B.1.1.4200.001006
ORF3a258P258delCCA---11B.1.1.4320.001266
ORF3a258P258SCcaTca11B.1.1.4340.000349
ORF3a258P258delCCA---11B.1.1.440.00241
ORF3a258P258LcCacTa11B.1.1.4400.011765
ORF3a258P258QcCacAa11B.1.1.5190.00004
ORF3a258P258TCcaAca11B.1.1.5190.00004
ORF3a258P258SCcaTca11B.1.1.540.003021
ORF3a258P258delCCA---11B.1.1.630.000386
ORF3a258P258ACcaGca11B.1.1.70.000001
ORF3a258P258SCcaTca11B.1.1030.019231
ORF3a258P258SCcaTca11B.1.1100.004525
ORF3a258P258SCcaTca11B.1.110.30.000718
ORF3a258P258delCCA---11B.1.110.30.000718
ORF3a258P258delCCA---11B.1.1280.000635
ORF3a258P258delCCA---11B.1.1490.003425
ORF3a258P258RcCacGa11B.1.1600.000031
ORF3a258P258SCcaTca11B.1.1600.000031
ORF3a258P258LcCacTa11B.1.160.120.00641
ORF3a258P258delCCA---11B.1.160.330.004425
ORF3a258P258SCcaTca11B.1.160.90.007194
ORF3a258P258del1Cca-ca11B.1.1770.000013
ORF3a258P258SCcaTca11B.1.1770.000013
ORF3a258P258del2CCAT--11B.1.1770.000013
ORF3a258P258delCCA---11B.1.177.150.000631
ORF3a258P258delCCA---11B.1.177.160.000664
ORF3a258P258delCCA---11B.1.177.240.001295
ORF3a258P258delCCA---11B.1.177.50.001242
ORF3a258P258LcCacTa11B.1.177.570.000281
ORF3a258P258LcCacTa11B.1.177.600.000218
ORF3a258P258delCCA---11B.1.177.600.000218
ORF3a258P258LcCacTa11B.1.177.720.00339
ORF3a258P258LcCacTa11B.1.177.770.000726
ORF3a258P258delCCA---11B.1.177.810.000189
ORF3a258P258delCCA---11B.1.177.860.000183
ORF3a258P258delCCA---11B.1.177.870.000728
ORF3a258P258SCcaTca11B.1.1890.004292
ORF3a258P258RcCacGa11B.1.20.000009
ORF3a258P258del1ccAcc-11B.1.20.000009
ORF3a258P258PccAccT11B.1.2210.000071
ORF3a258P258delCCA---11B.1.221.40.004167
ORF3a258P258SCcaTca11B.1.2230.002778
ORF3a258P258delCCA---11B.1.2370.004975
ORF3a258P258LcCacTa11B.1.2400.000216
ORF3a258P258TCcaAca11B.1.2580.000067
ORF3a258P258LcCacTa11B.1.258.170.000104
ORF3a258P258PccAccC11B.1.258.170.000104
ORF3a258P258delCCA---11B.1.2650.001271
ORF3a258P258delCCA---11B.1.2790.000514
ORF3a258P258delCCA---11B.1.2980.002114
ORF3a258P258SCcaTca11B.1.3020.013333
ORF3a258P258LcCacTa11B.1.3110.000275
ORF3a258P258delCCA---11B.1.3200.001245
ORF3a258P258LcCacTa11B.1.3260.007576
ORF3a258P258delCCA---11B.1.3360.002439
ORF3a258P258ACcaGca11B.1.3510.00003
ORF3a258P258PccAccT11B.1.3510.00003
ORF3a258P258LcCacTa11B.1.3510.00003
ORF3a258P258QcCacAa11B.1.351.20.000303
ORF3a258P258TCcaAca11B.1.351.20.000303
ORF3a258P258LcCacTa11B.1.351.30.000876
ORF3a258P258delCCA---11B.1.360.000146
ORF3a258P258delCCA---11B.1.36.290.000517
ORF3a258P258LcCacTa11B.1.36.70.004
ORF3a258P258SCcaTca11B.1.36.80.001
ORF3a258P258LcCacTa11B.1.3770.004566
ORF3a258P258delCCA---11B.1.3800.006623
ORF3a258P258SCcaTca11B.1.4040.001302
ORF3a258P258delCCA---11B.1.4090.000781
ORF3a258P258TCcaAca11B.1.4270.00005
ORF3a258P258PccAccT11B.1.4270.00005
ORF3a258P258QcCacAa11B.1.4290.000024
ORF3a258P258delCCA---11B.1.4590.004082
ORF3a258P258delCCA---11B.1.466.20.000391
ORF3a258P258delCCA---11B.1.4700.001404
ORF3a258P258delCCA---11B.1.4730.019231
ORF3a258P258delCCA---11B.1.4970.000315
ORF3a258P258LcCacTa11B.1.5170.000427
ORF3a258P258SCcaTca11B.1.5210.004975
ORF3a258P258delCCA---11B.1.5210.004975
ORF3a258P258TCcaAca11B.1.5250.000113
ORF3a258P258LcCacTa11B.1.5260.000024
ORF3a258P258PccAccT11B.1.5410.004425
ORF3a258P258LcCacTa11B.1.5460.003704
ORF3a258P258delCCA---11B.1.5510.00129
ORF3a258P258delCCA---11B.1.5610.000397
ORF3a258P258LcCacTa11B.1.5680.001111
ORF3a258P258delCCA---11B.1.5770.000687
ORF3a258P258QcCacAa11B.1.5960.000087
ORF3a258P258SCcaTca11B.1.5960.000087
ORF3a258P258delCCA---11B.1.617.10.000129
ORF3a258P258ACcaGca11B.1.617.20.000004
ORF3a258P258QcCacAa11B.1.617.20.000004
ORF3a258P258delCCA---11B.1.6280.000352
ORF3a258P258PccAccT11B.610.005747
ORF3a258P258LcCacTa11C.350.000774
ORF3a258P258QcCacAa11C.36.30.000567
ORF3a258P258delCCA---11C.36.30.000567
ORF3a258P258delCCA---11C.36.3.10.002717
ORF3a258P258LcCacTa11C.370.000116
ORF3a258P258SCcaTca11D.20.000075
ORF3a258P258delCCA---11D.20.000075
ORF3a258P258TCcaAca11K.10.02381
ORF3a258P258PccAccT11P.1.140.000048
ORF3a258P258delCCA---11P.1.140.000048
ORF3a258P258delCCA---11P.60.003145
ORF3a258P258TCcaAca11Q.10.000126
ORF3a258P258SCcaTca11Q.10.000126
ORF3a258P258delCCA---11Q.20.000613
ORF3a258P258SCcaTca11Q.30.000145
ORF3a258P258delCCA---11Q.30.000145
ORF3a258P258QcCacAa11R.10.00009
ORF3a258P258LcCacTa11R.10.00009