CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 257 & Codon = -at

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF3a	257	N257del1		del	Aat	-at	21794	21780	0.999358	26161-26163

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF3a	257	N257del1	Aat	-at	21780	21794	All	0.004166
ORF3a	257	N257del1	Aat	-at	10696	10701	B.1.621	0.9468
ORF3a	257	N257del1	Aat	-at	2601	2601	B.1.628	0.91649
ORF3a	257	N257del1	Aat	-at	1840	1840	B.1.621.1	0.930703
ORF3a	257	N257del1	Aat	-at	637	638	B.1.1.7	0.00057
ORF3a	257	N257del1	Aat	-at	558	558	AY.29	0.008802
ORF3a	257	N257del1	Aat	-at	437	437	B.1.627	0.882828
ORF3a	257	N257del1	Aat	-at	341	341	AY.4	0.000531
ORF3a	257	N257del1	Aat	-at	316	316	B.1	0.002894
ORF3a	257	N257del1	Aat	-at	271	271	B.1.631	0.912458
ORF3a	257	N257del1	Aat	-at	265	265	B.1.617.2	0.000998
ORF3a	257	N257del1	Aat	-at	253	253	B.1.634	0.866438
ORF3a	257	N257del1	Aat	-at	247	248	B.1.1	0.004481
ORF3a	257	N257del1	Aat	-at	211	211	AY.44	0.001284
ORF3a	257	N257del1	Aat	-at	194	194	B.1.1.222	0.039576
ORF3a	257	N257del1	Aat	-at	192	192	AV.1	0.969697
ORF3a	257	N257del1	Aat	-at	181	181	AY.103	0.001124
ORF3a	257	N257del1	Aat	-at	163	167	B.1.2	0.001435
ORF3a	257	N257del1	Aat	-at	136	137	B.1.160	0.004242
ORF3a	257	N257del1	Aat	-at	135	135	B.1.526	0.003173
ORF3a	257	N257del1	Aat	-at	128	128	AY.25	0.00077
ORF3a	257	N257del1	Aat	-at	92	92	B.1.1.519	0.003653
ORF3a	257	N257del1	Aat	-at	84	84	AY.9.2	0.003085
ORF3a	257	N257del1	Aat	-at	72	72	B.1.1.214	0.003993
ORF3a	257	N257del1	Aat	-at	68	68	AY.26	0.001925
ORF3a	257	N257del1	Aat	-at	65	65	B.1.243.2	0.942029
ORF3a	257	N257del1	Aat	-at	59	59	B.1.36	0.008608
ORF3a	257	N257del1	Aat	-at	58	58	B.1.429	0.001365
ORF3a	257	N257del1	Aat	-at	57	57	B.1.619.1	0.036562
ORF3a	257	N257del1	Aat	-at	46	46	AY.43	0.000204
ORF3a	257	N257del1	Aat	-at	45	45	B.1.177	0.000593
ORF3a	257	N257del1	Aat	-at	45	45	B.1.639	0.978261
ORF3a	257	N257del1	Aat	-at	44	44	AY.14	0.003873
ORF3a	257	N257del1	Aat	-at	44	44	B.1.565	0.035656
ORF3a	257	N257del1	Aat	-at	42	42	AY.47	0.001306
ORF3a	257	N257del1	Aat	-at	40	40	C.37	0.004643
ORF3a	257	N257del1	Aat	-at	36	36	AY.117	0.003043
ORF3a	257	N257del1	Aat	-at	36	36	AY.3	0.000358
ORF3a	257	N257del1	Aat	-at	33	33	B.1.234	0.004354
ORF3a	257	N257del1	Aat	-at	33	33	C.40	0.916667
ORF3a	257	N257del1	Aat	-at	28	28	B.1.243	0.001948
ORF3a	257	N257del1	Aat	-at	27	27	AY.36	0.004002
ORF3a	257	N257del1	Aat	-at	25	25	AY.10	0.013249
ORF3a	257	N257del1	Aat	-at	22	22	P.1	0.000347
ORF3a	257	N257del1	Aat	-at	19	19	AY.100	0.000874
ORF3a	257	N257del1	Aat	-at	19	19	AY.102	0.000504
ORF3a	257	N257del1	Aat	-at	19	19	B.1.623	0.010193
ORF3a	257	N257del1	Aat	-at	18	18	AY.5	0.000372
ORF3a	257	N257del1	Aat	-at	17	17	A	0.006579
ORF3a	257	N257del1	Aat	-at	17	17	AY.113	0.002421
ORF3a	257	N257del1	Aat	-at	17	17	AY.119	0.0006
ORF3a	257	N257del1	Aat	-at	17	17	AY.9.1	0.001423
ORF3a	257	N257del1	Aat	-at	17	17	B.1.517	0.007259
ORF3a	257	N257del1	Aat	-at	15	15	AY.75	0.00084
ORF3a	257	N257del1	Aat	-at	15	15	B.1.351	0.000446
ORF3a	257	N257del1	Aat	-at	14	14	AY.39	0.000346
ORF3a	257	N257del1	Aat	-at	14	14	B.1.220	0.152174
ORF3a	257	N257del1	Aat	-at	13	13	AY.20	0.000505
ORF3a	257	N257del1	Aat	-at	13	13	B.1.1.306	0.005699
ORF3a	257	N257del1	Aat	-at	13	13	P.1.12	0.006292
ORF3a	257	N257del1	Aat	-at	12	12	AY.23	0.000837
ORF3a	257	N257del1	Aat	-at	12	12	B	0.001534
ORF3a	257	N257del1	Aat	-at	12	12	B.1.177.86	0.002201
ORF3a	257	N257del1	Aat	-at	12	12	B.1.221	0.000852
ORF3a	257	N257del1	Aat	-at	11	11	AY.24	0.004741
ORF3a	257	N257del1	Aat	-at	10	10	B.1.1.171	0.036765
ORF3a	257	N257del1	Aat	-at	10	10	B.1.110.3	0.007184
ORF3a	257	N257del1	Aat	-at	10	10	B.1.427	0.000505
ORF3a	257	N257del1	Aat	-at	10	10	B.1.596	0.000871
ORF3a	257	N257del1	Aat	-at	10	10	P.2	0.001866
ORF3a	257	N257del1	Aat	-at	9	9	AY.120	0.000335
ORF3a	257	N257del1	Aat	-at	9	9	AY.39.1	0.000357
ORF3a	257	N257del1	Aat	-at	9	9	B.1.1.141	0.018109
ORF3a	257	N257del1	Aat	-at	9	9	B.1.369	0.002567
ORF3a	257	N257del1	Aat	-at	9	9	B.1.466.2	0.003521
ORF3a	257	N257del1	Aat	-at	9	9	C.13	0.230769
ORF3a	257	N257del1	Aat	-at	8	8	B.1.1.432	0.010127
ORF3a	257	N257del1	Aat	-at	8	8	B.1.177.9	0.010652
ORF3a	257	N257del1	Aat	-at	8	8	B.1.258	0.000532
ORF3a	257	N257del1	Aat	-at	7	7	AY.4.2	0.000152
ORF3a	257	N257del1	Aat	-at	7	7	AY.88	0.006189
ORF3a	257	N257del1	Aat	-at	6	6	AY.114	0.001387
ORF3a	257	N257del1	Aat	-at	6	6	B.1.1.198	0.008811
ORF3a	257	N257del1	Aat	-at	6	6	B.1.1.413	0.041379
ORF3a	257	N257del1	Aat	-at	6	6	B.1.160.29	0.025316
ORF3a	257	N257del1	Aat	-at	6	6	B.1.177.83	0.008889
ORF3a	257	N257del1	Aat	-at	6	6	B.1.258.17	0.000624
ORF3a	257	N257del1	Aat	-at	6	6	Q.8	0.000989
ORF3a	257	N257del1	Aat	-at	5	5	A.2.5	0.002495
ORF3a	257	N257del1	Aat	-at	5	5	AY.13	0.000805
ORF3a	257	N257del1	Aat	-at	5	5	B.1.1.25	0.002843
ORF3a	257	N257del1	Aat	-at	5	5	B.1.1.297	0.011186
ORF3a	257	N257del1	Aat	-at	5	5	B.1.1.381	0.2
ORF3a	257	N257del1	Aat	-at	5	5	B.1.1.70	0.001705
ORF3a	257	N257del1	Aat	-at	5	5	B.1.128	0.003177
ORF3a	257	N257del1	Aat	-at	5	5	B.1.247	0.074627
ORF3a	257	N257del1	Aat	-at	5	5	B.1.637	0.000365
ORF3a	257	N257del1	Aat	-at	5	5	P.5	0.068493
ORF3a	257	N257del1	Aat	-at	4	4	A.2	0.002647
ORF3a	257	N257del1	Aat	-at	4	4	AY.120.1	0.001284
ORF3a	257	N257del1	Aat	-at	4	4	AY.121	0.000541
ORF3a	257	N257del1	Aat	-at	4	4	AY.6	0.000165
ORF3a	257	N257del1	Aat	-at	4	4	AY.61	0.000419
ORF3a	257	N257del1	Aat	-at	4	4	AY.68	0.001095
ORF3a	257	N257del1	Aat	-at	4	4	AY.92	0.001149
ORF3a	257	N257del1	Aat	-at	4	4	B.1.1.28	0.001245
ORF3a	257	N257del1	Aat	-at	4	4	B.1.1.317	0.001647
ORF3a	257	N257del1	Aat	-at	4	4	B.1.1.318	0.001207
ORF3a	257	N257del1	Aat	-at	4	4	B.1.1.326	0.007042
ORF3a	257	N257del1	Aat	-at	4	4	B.1.157	0.01194
ORF3a	257	N257del1	Aat	-at	4	4	B.1.214.2	0.002398
ORF3a	257	N257del1	Aat	-at	4	4	D.2	0.0003
ORF3a	257	N257del1	Aat	-at	4	4	P.1.10	0.001078
ORF3a	257	N257del1	Aat	-at	4	4	P.1.14	0.000191
ORF3a	257	N257del1	Aat	-at	2	3	AY.118	0.000125
ORF3a	257	N257del1	Aat	-at	3	3	AY.12	0.000948
ORF3a	257	N257del1	Aat	-at	3	3	AY.29.1	0.000662
ORF3a	257	N257del1	Aat	-at	3	3	AY.38	0.001498
ORF3a	257	N257del1	Aat	-at	3	3	AY.42	0.000121
ORF3a	257	N257del1	Aat	-at	3	3	AY.46.6	0.000217
ORF3a	257	N257del1	Aat	-at	3	3	AY.57	0.001969
ORF3a	257	N257del1	Aat	-at	3	3	AY.98	0.000237
ORF3a	257	N257del1	Aat	-at	3	3	AY.99.2	0.000276
ORF3a	257	N257del1	Aat	-at	3	3	AZ.2	0.002463
ORF3a	257	N257del1	Aat	-at	3	3	B.1.1.1	0.00098
ORF3a	257	N257del1	Aat	-at	3	3	B.1.1.165	0.046154
ORF3a	257	N257del1	Aat	-at	3	3	B.1.1.258	0.009772
ORF3a	257	N257del1	Aat	-at	3	3	B.1.1.284	0.000322
ORF3a	257	N257del1	Aat	-at	3	3	B.1.1.39	0.001529
ORF3a	257	N257del1	Aat	-at	3	3	B.1.1.397	0.006757
ORF3a	257	N257del1	Aat	-at	3	3	B.1.177.73	0.001699
ORF3a	257	N257del1	Aat	-at	3	3	B.1.177.75	0.003122
ORF3a	257	N257del1	Aat	-at	3	3	B.1.206	0.002447
ORF3a	257	N257del1	Aat	-at	3	3	B.1.232	0.001612
ORF3a	257	N257del1	Aat	-at	3	3	B.1.240	0.000647
ORF3a	257	N257del1	Aat	-at	3	3	B.1.280	0.021429
ORF3a	257	N257del1	Aat	-at	3	3	B.1.456	0.009804
ORF3a	257	N257del1	Aat	-at	3	3	B.1.524	0.004219
ORF3a	257	N257del1	Aat	-at	3	3	B.1.533	0.028846
ORF3a	257	N257del1	Aat	-at	3	3	B.1.576	0.00272
ORF3a	257	N257del1	Aat	-at	3	3	C.37.1	0.007853
ORF3a	257	N257del1	Aat	-at	2	2	AY.16	0.000759
ORF3a	257	N257del1	Aat	-at	2	2	AY.33	0.000134
ORF3a	257	N257del1	Aat	-at	2	2	AY.45	0.000243
ORF3a	257	N257del1	Aat	-at	2	2	AY.46	0.000208
ORF3a	257	N257del1	Aat	-at	2	2	AY.9	0.000135
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.153	0.002191
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.159	0.009346
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.174	0.006757
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.189	0.003026
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.208	0.02439
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.220	0.003717
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.311	0.000716
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.33	0.000842
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.385	0.008929
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.4	0.005952
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.409	0.005666
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.46	0.008734
ORF3a	257	N257del1	Aat	-at	2	2	B.1.1.99	0.047619
ORF3a	257	N257del1	Aat	-at	2	2	B.1.111	0.00235
ORF3a	257	N257del1	Aat	-at	2	2	B.1.139	0.001466
ORF3a	257	N257del1	Aat	-at	2	2	B.1.160.10	0.016129
ORF3a	257	N257del1	Aat	-at	2	2	B.1.177.81	0.000379
ORF3a	257	N257del1	Aat	-at	2	2	B.1.265	0.002541
ORF3a	257	N257del1	Aat	-at	2	2	B.1.311	0.000549
ORF3a	257	N257del1	Aat	-at	2	2	B.1.36.17	0.000988
ORF3a	257	N257del1	Aat	-at	2	2	B.1.36.8	0.002
ORF3a	257	N257del1	Aat	-at	2	2	B.1.380	0.013245
ORF3a	257	N257del1	Aat	-at	2	2	B.1.416	0.002538
ORF3a	257	N257del1	Aat	-at	2	2	B.1.471	0.005464
ORF3a	257	N257del1	Aat	-at	2	2	B.1.474	0.003802
ORF3a	257	N257del1	Aat	-at	2	2	B.1.575	0.000607
ORF3a	257	N257del1	Aat	-at	2	2	B.1.619	0.001742
ORF3a	257	N257del1	Aat	-at	2	2	B.1.9.5	0.011364
ORF3a	257	N257del1	Aat	-at	2	2	B.55	0.0059
ORF3a	257	N257del1	Aat	-at	2	2	C.36.3	0.001134
ORF3a	257	N257del1	Aat	-at	2	2	P.1.17	0.000324
ORF3a	257	N257del1	Aat	-at	2	2	Q.3	0.00029
ORF3a	257	N257del1	Aat	-at	2	2	Q.4	0.00091
ORF3a	257	N257del1	Aat	-at	2	2	R.1	0.00018
ORF3a	257	N257del1	Aat	-at	1	1	A.19	0.009434
ORF3a	257	N257del1	Aat	-at	1	1	A.28	0.002646
ORF3a	257	N257del1	Aat	-at	1	1	A.5	0.001923
ORF3a	257	N257del1	Aat	-at	1	1	AU.1	0.001266
ORF3a	257	N257del1	Aat	-at	1	1	AU.3	0.00211
ORF3a	257	N257del1	Aat	-at	1	1	AY.1	0.000396
ORF3a	257	N257del1	Aat	-at	1	1	AY.104	0.001984
ORF3a	257	N257del1	Aat	-at	1	1	AY.106	0.000335
ORF3a	257	N257del1	Aat	-at	1	1	AY.111	0.000183
ORF3a	257	N257del1	Aat	-at	1	1	AY.116	0.000287
ORF3a	257	N257del1	Aat	-at	1	1	AY.30	0.000396
ORF3a	257	N257del1	Aat	-at	1	1	AY.35	0.000233
ORF3a	257	N257del1	Aat	-at	1	1	AY.4.3	0.000842
ORF3a	257	N257del1	Aat	-at	1	1	AY.4.5	0.000107
ORF3a	257	N257del1	Aat	-at	1	1	AY.5.3	0.000337
ORF3a	257	N257del1	Aat	-at	1	1	AY.51	0.000909
ORF3a	257	N257del1	Aat	-at	1	1	AY.54	0.000095
ORF3a	257	N257del1	Aat	-at	1	1	AY.55	0.000917
ORF3a	257	N257del1	Aat	-at	1	1	AY.59	0.00053
ORF3a	257	N257del1	Aat	-at	1	1	AY.60	0.000938
ORF3a	257	N257del1	Aat	-at	1	1	AY.62	0.000436
ORF3a	257	N257del1	Aat	-at	1	1	AY.65	0.000533
ORF3a	257	N257del1	Aat	-at	1	1	AY.67	0.000464
ORF3a	257	N257del1	Aat	-at	1	1	AY.73	0.000665
ORF3a	257	N257del1	Aat	-at	1	1	AY.74	0.000116
ORF3a	257	N257del1	Aat	-at	1	1	AY.75.1	0.00018
ORF3a	257	N257del1	Aat	-at	1	1	AY.79	0.001211
ORF3a	257	N257del1	Aat	-at	1	1	AY.84	0.000437
ORF3a	257	N257del1	Aat	-at	1	1	AY.85	0.000427
ORF3a	257	N257del1	Aat	-at	1	1	AY.98.1	0.000048
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.117	0.009709
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.133	0.008475
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.135	0.004695
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.161	0.003534
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.192	0.002309
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.207	0.001182
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.244	0.015385
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.308	0.011765
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.322	0.008772
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.368	0.003086
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.369	0.000446
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.398	0.003226
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.420	0.001006
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.434	0.000349
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.448	0.002033
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.481	0.071429
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.5	0.008333
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.50	0.000679
ORF3a	257	N257del1	Aat	-at	1	1	B.1.1.526	0.003546
ORF3a	257	N257del1	Aat	-at	1	1	B.1.160.30	0.002976
ORF3a	257	N257del1	Aat	-at	1	1	B.1.170	0.00431
ORF3a	257	N257del1	Aat	-at	1	1	B.1.177.17	0.000821
ORF3a	257	N257del1	Aat	-at	1	1	B.1.177.21	0.000076
ORF3a	257	N257del1	Aat	-at	1	1	B.1.177.32	0.00135
ORF3a	257	N257del1	Aat	-at	1	1	B.1.177.33	0.001645
ORF3a	257	N257del1	Aat	-at	1	1	B.1.177.4	0.000211
ORF3a	257	N257del1	Aat	-at	1	1	B.1.177.43	0.001477
ORF3a	257	N257del1	Aat	-at	1	1	B.1.177.5	0.001242
ORF3a	257	N257del1	Aat	-at	1	1	B.1.239	0.001221
ORF3a	257	N257del1	Aat	-at	1	1	B.1.241	0.000812
ORF3a	257	N257del1	Aat	-at	1	1	B.1.243.1	0.022222
ORF3a	257	N257del1	Aat	-at	1	1	B.1.258.11	0.000396
ORF3a	257	N257del1	Aat	-at	1	1	B.1.258.14	0.00098
ORF3a	257	N257del1	Aat	-at	1	1	B.1.260	0.003344
ORF3a	257	N257del1	Aat	-at	1	1	B.1.320	0.001245
ORF3a	257	N257del1	Aat	-at	1	1	B.1.323	0.020833
ORF3a	257	N257del1	Aat	-at	1	1	B.1.324	0.001605
ORF3a	257	N257del1	Aat	-at	1	1	B.1.349	0.000715
ORF3a	257	N257del1	Aat	-at	1	1	B.1.356	0.001727
ORF3a	257	N257del1	Aat	-at	1	1	B.1.36.1	0.00114
ORF3a	257	N257del1	Aat	-at	1	1	B.1.36.16	0.001425
ORF3a	257	N257del1	Aat	-at	1	1	B.1.36.18	0.00042
ORF3a	257	N257del1	Aat	-at	1	1	B.1.36.31	0.001751
ORF3a	257	N257del1	Aat	-at	1	1	B.1.362	0.001541
ORF3a	257	N257del1	Aat	-at	1	1	B.1.367	0.000792
ORF3a	257	N257del1	Aat	-at	1	1	B.1.396	0.000706
ORF3a	257	N257del1	Aat	-at	1	1	B.1.404	0.001302
ORF3a	257	N257del1	Aat	-at	1	1	B.1.409	0.000781
ORF3a	257	N257del1	Aat	-at	1	1	B.1.411	0.003704
ORF3a	257	N257del1	Aat	-at	1	1	B.1.438	0.006536
ORF3a	257	N257del1	Aat	-at	1	1	B.1.438.1	0.000107
ORF3a	257	N257del1	Aat	-at	1	1	B.1.438.4	0.021277
ORF3a	257	N257del1	Aat	-at	1	1	B.1.448	0.002625
ORF3a	257	N257del1	Aat	-at	1	1	B.1.470	0.001404
ORF3a	257	N257del1	Aat	-at	1	1	B.1.497	0.000315
ORF3a	257	N257del1	Aat	-at	1	1	B.1.516	0.001957
ORF3a	257	N257del1	Aat	-at	1	1	B.1.525	0.000113
ORF3a	257	N257del1	Aat	-at	1	1	B.1.544	0.006024
ORF3a	257	N257del1	Aat	-at	1	1	B.1.551	0.00129
ORF3a	257	N257del1	Aat	-at	1	1	B.1.561	0.000397
ORF3a	257	N257del1	Aat	-at	1	1	B.1.564	0.000426
ORF3a	257	N257del1	Aat	-at	1	1	B.1.582	0.000491
ORF3a	257	N257del1	Aat	-at	1	1	B.1.601	0.030303
ORF3a	257	N257del1	Aat	-at	1	1	B.1.617.1	0.000129
ORF3a	257	N257del1	Aat	-at	1	1	B.1.638	0.052632
ORF3a	257	N257del1	Aat	-at	1	1	B.3	0.000831
ORF3a	257	N257del1	Aat	-at	1	1	B.4	0.002208
ORF3a	257	N257del1	Aat	-at	1	1	B.6	0.00091
ORF3a	257	N257del1	Aat	-at	1	1	C.30.1	0.006711
ORF3a	257	N257del1	Aat	-at	1	1	C.35	0.000774
ORF3a	257	N257del1	Aat	-at	1	1	N.6	0.007092
ORF3a	257	N257del1	Aat	-at	1	1	P.1.15	0.000232
ORF3a	257	N257del1	Aat	-at	1	1	P.1.3	0.034483
ORF3a	257	N257del1	Aat	-at	1	1	P.1.7	0.000319
ORF3a	257	N257del1	Aat	-at	1	1	W.4	0.001351

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.