CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 254

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a254G254XnonsynGgaTga789378890.99949326152-26154
ORF3a254G254XnonsynGGaTAa789340.00050677826152-26154
ORF3a254G254VnonsyngGagTa293929370.99931926152-26154
ORF3a254G254VnonsyngGAgTT293910.00034025226152-26154
ORF3a254G254VnonsyngGAgTG293910.00034025226152-26154
ORF3a254G254RnonsynGgaAga196117680.90158126152-26154
ORF3a254G254RnonsynGgaCga19611910.097399326152-26154
ORF3a254G254RnonsynGgACgG196120.0010198926152-26154
ORF3a254G254GsynggAggG3121190.3814126152-26154
ORF3a254G254GsynggAggT3121110.35576926152-26154
ORF3a254G254GsynggAggC312820.26282126152-26154
ORF3a254G254EnonsyngGagAa102102126152-26154
ORF3a254G254del1delggAgg-58520.89655226152-26154
ORF3a254G254del1delGga-ga5850.086206926152-26154
ORF3a254G254del1delGGANA-5810.017241426152-26154
ORF3a254G254AnonsyngGagCa4545126152-26154
ORF3a254G254deldelGGA---3838126152-26154
ORF3a254G254LnonsynGGaTTa66126152-26154
ORF3a254G254InonsynGGaATa650.83333326152-26154
ORF3a254G254InonsynGGAATT610.16666726152-26154
ORF3a254G254del2delgGAg--11126152-26154

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a254G254XGgaTga78897893All0.001509
ORF3a254G254XGGaTAa47893All0.000001
ORF3a254G254XGgaTga30593059B.1.1.70.002738
ORF3a254G254XGgaTga29682969B.1.3510.088228
ORF3a254G254XGGaTAa12969B.1.3510.00003
ORF3a254G254VgGagTa29372939All0.000562
ORF3a254G254VgGAgTT12939All0
ORF3a254G254VgGAgTG12939All0
ORF3a254G254RGgaAga17681961All0.000338
ORF3a254G254RGgaCga1911961All0.000037
ORF3a254G254RGgACgG21961All0
ORF3a254G254VgGagTa663663AY.40.001032
ORF3a254G254VgGagTa635635AY.1030.003943
ORF3a254G254VgGagTa605606B.1.1.70.000542
ORF3a254G254VgGAgTG1606B.1.1.70.000001
ORF3a254G254RGgaAga369369P.1.170.059689
ORF3a254G254RGgaAga334334AY.380.16675
ORF3a254G254GggAggG119312All0.000023
ORF3a254G254GggAggT111312All0.000021
ORF3a254G254GggAggC82312All0.000016
ORF3a254G254XGgaTga243243AY.440.001479
ORF3a254G254VgGagTa213213B.1.1.2220.043452
ORF3a254G254RGgaAga118198AY.40.000184
ORF3a254G254RGgaCga80198AY.40.000125
ORF3a254G254XGgaTga168168AY.40.000261
ORF3a254G254RGgaAga154154B.1.1600.004803
ORF3a254G254XGgaTga150150AY.250.000902
ORF3a254G254RGgaAga140140B.1.5820.068695
ORF3a254G254RGgaAga115121B.1.1.70.000103
ORF3a254G254RGgaCga6121B.1.1.70.000005
ORF3a254G254XGgaTga106106B.10.000971
ORF3a254G254EgGagAa102102All0.00002
ORF3a254G254VgGagTa9696B.1.1.2360.662069
ORF3a254G254XGgaTga9191B.1.617.20.000343
ORF3a254G254VgGagTa8181AY.430.000359
ORF3a254G254RGgaAga7878AY.430.000346
ORF3a254G254XGgaTga7474AY.39.10.002931
ORF3a254G254XGgaTga6970B.1.20.000608
ORF3a254G254XGGaTAa170B.1.20.000009
ORF3a254G254del1ggAgg-5258All0.00001
ORF3a254G254del1Gga-ga558All0.000001
ORF3a254G254del1GGANA-158All0
ORF3a254G254XGgaTga5757AY.430.000253
ORF3a254G254XGgaTga5757B.1.1.2660.695122
ORF3a254G254RGgaAga5656B.1.177.860.010273
ORF3a254G254VgGagTa5555B.1.617.20.000207
ORF3a254G254VgGagTa4848P.10.000756
ORF3a254G254AgGagCa4545All0.000009
ORF3a254G254XGgaTga4444P.10.000693
ORF3a254G254GggAggT3041AY.40.000047
ORF3a254G254GggAggG641AY.40.000009
ORF3a254G254GggAggC541AY.40.000008
ORF3a254G254delGGA---3838All0.000007
ORF3a254G254VgGagTa3636B.1.6020.235294
ORF3a254G254VgGagTa3434AY.250.000205
ORF3a254G254VgGagTa3434B.1.1770.000448
ORF3a254G254RGgaCga3434C.160.036055
ORF3a254G254del1ggAgg-3132B.1.20.000273
ORF3a254G254del1GGANA-132B.1.20.000009
ORF3a254G254XGgaTga3131AY.1030.000192
ORF3a254G254GggAggG2631AY.1030.000161
ORF3a254G254GggAggC531AY.1030.000031
ORF3a254G254VgGagTa3031B.1.10.000544
ORF3a254G254VgGAgTT131B.1.10.000018
ORF3a254G254VgGagTa3131B.1.1260.039541
ORF3a254G254VgGagTa3030B.10.000275
ORF3a254G254XGgaTga3030B.1.1770.000395
ORF3a254G254XGgaTga2929AY.260.000821
ORF3a254G254RGgaAga2429B.1.617.20.00009
ORF3a254G254RGgaCga529B.1.617.20.000019
ORF3a254G254XGgaTga2828AY.390.000692
ORF3a254G254RGgaAga1926AY.440.000116
ORF3a254G254RGgaCga726AY.440.000043
ORF3a254G254GggAggC2626B.1.5740.055914
ORF3a254G254XGgaTga2525AY.30.000249
ORF3a254G254GggAggG2125B.1.1.70.000019
ORF3a254G254GggAggC325B.1.1.70.000003
ORF3a254G254GggAggT125B.1.1.70.000001
ORF3a254G254RGgaAga1523AY.1030.000093
ORF3a254G254RGgaCga823AY.1030.00005
ORF3a254G254GggAggT2323AY.4.50.002472
ORF3a254G254RGgaAga2223B.1.10.000399
ORF3a254G254RGgaCga123B.1.10.000018
ORF3a254G254AgGagCa2323B.1.2430.0016
ORF3a254G254XGgaTga2323C.270.425926
ORF3a254G254EgGagAa2222AY.650.011727
ORF3a254G254XGgaTga2121B.1.2430.001461
ORF3a254G254EgGagAa2020AY.40.000031
ORF3a254G254XGgaTga2020B.1.1600.000624
ORF3a254G254RGgaAga1719B.10.000156
ORF3a254G254RGgaCga219B.10.000018
ORF3a254G254XGgaTga1919B.1.351.20.005749
ORF3a254G254GggAggG1319B.1.617.20.000049
ORF3a254G254GggAggC419B.1.617.20.000015
ORF3a254G254GggAggT219B.1.617.20.000008
ORF3a254G254XGgaTga1818AY.1020.000477
ORF3a254G254XGgaTga1818AY.3.10.001535
ORF3a254G254RGgaAga1718B.1.5260.0004
ORF3a254G254RGgaCga118B.1.5260.000024
ORF3a254G254VgGagTa1717AY.440.000103
ORF3a254G254XGgaTga1717B.1.10.000308
ORF3a254G254VgGagTa1717B.1.6210.001505
ORF3a254G254XGgaTga1616AY.1080.017641
ORF3a254G254GggAggT1616AY.270.001036
ORF3a254G254XGgaTga1616B.1.5950.004175
ORF3a254G254XGgaTga1414AY.690.002613
ORF3a254G254VgGagTa1414B.1.20.000123
ORF3a254G254RGgaAga714B.1.20.000062
ORF3a254G254RGgaCga714B.1.20.000062
ORF3a254G254RGgaAga1414B.1.2580.000932
ORF3a254G254VgGagTa1313AY.470.000404
ORF3a254G254VgGagTa1313B.1.1.500.008826
ORF3a254G254RGgaAga1212A.10.003382
ORF3a254G254XGgaTga1212AY.50.000248
ORF3a254G254XGgaTga1212B.1.5260.000282
ORF3a254G254XGgaTga1212B.1.6210.001062
ORF3a254G254VgGagTa1111AY.390.000272
ORF3a254G254XGgaTga1111B.1.3460.014417
ORF3a254G254XGgaTga1011B.1.4290.000235
ORF3a254G254XGGaTAa111B.1.4290.000024
ORF3a254G254XGgaTga1111B.1.6370.000804
ORF3a254G254VgGagTa1010AY.1020.000265
ORF3a254G254XGgaTga1010AY.230.000697
ORF3a254G254XGgaTga1010B.1.177.750.010406
ORF3a254G254XGgaTga1010B.1.6360.067114
ORF3a254G254VgGagTa99AY.30.00009
ORF3a254G254VgGagTa99AY.4.50.000967
ORF3a254G254VgGagTa99AY.50.000186
ORF3a254G254GggAggG89AY.750.000448
ORF3a254G254GggAggC19AY.750.000056
ORF3a254G254XGgaTga99B.1.1.5190.000357
ORF3a254G254EgGagAa99B.1.1.70.000008
ORF3a254G254XGgaTga99B.1.2210.000639
ORF3a254G254XGgaTga99B.1.36.290.004656
ORF3a254G254GggAggC99B.1.6210.000797
ORF3a254G254VgGagTa99B.1.6230.004828
ORF3a254G254RGgaAga88AP.10.012012
ORF3a254G254XGgaTga88AY.1170.000676
ORF3a254G254VgGagTa88AY.1200.000297
ORF3a254G254VgGagTa88AY.130.001288
ORF3a254G254RGgaAga88AY.200.000311
ORF3a254G254XGgaTga88AY.60.000329
ORF3a254G254XGgaTga88AY.9.20.000294
ORF3a254G254XGgaTga88B.1.1.4870.044693
ORF3a254G254XGgaTga88B.1.177.860.001468
ORF3a254G254RGgaAga88B.1.6370.000585
ORF3a254G254RGgaAga88B.6.60.007111
ORF3a254G254RGgaAga78P.10.00011
ORF3a254G254RGgaCga18P.10.000016
ORF3a254G254VgGagTa88P.1.140.000382
ORF3a254G254RGgaAga77AY.1000.000322
ORF3a254G254GggAggC77AY.1190.000247
ORF3a254G254RGgaAga67AY.140.000528
ORF3a254G254RGgaCga17AY.140.000088
ORF3a254G254GggAggG57AY.200.000194
ORF3a254G254GggAggC17AY.200.000039
ORF3a254G254GggAggT17AY.200.000039
ORF3a254G254RGgaAga77AY.250.000042
ORF3a254G254GggAggG37AY.250.000018
ORF3a254G254GggAggC37AY.250.000018
ORF3a254G254GggAggT17AY.250.000006
ORF3a254G254VgGagTa77AY.4.20.000152
ORF3a254G254XGgaTga77AY.90.000473
ORF3a254G254RGgaCga47B.1.1.5190.000159
ORF3a254G254RGgaAga37B.1.1.5190.000119
ORF3a254G254delGGA---77B.1.1.70.000006
ORF3a254G254RGgaAga77B.1.177.870.005095
ORF3a254G254VgGagTa77B.1.2210.000497
ORF3a254G254XGgaTga77B.1.5160.013699
ORF3a254G254XGgaTga77B.1.5960.00061
ORF3a254G254XGgaTga77C.370.000812
ORF3a254G254delGGA---660.333333
ORF3a254G254RGgaAga66A0.002322
ORF3a254G254LGGaTTa66All0.000001
ORF3a254G254IGGaATa56All0.000001
ORF3a254G254IGGAATT16All0
ORF3a254G254VgGagTa66AY.1000.000276
ORF3a254G254XGgaTga66AY.1040.011905
ORF3a254G254XGgaTga66AY.1200.000223
ORF3a254G254XGgaTga66AY.39.20.009245
ORF3a254G254XGgaTga66AY.420.000241
ORF3a254G254EgGagAa66AY.440.000037
ORF3a254G254GggAggT56AY.90.000338
ORF3a254G254GggAggG16AY.90.000068
ORF3a254G254VgGagTa66AY.9.20.00022
ORF3a254G254RGgaAga66B.1.1.1440.171429
ORF3a254G254RGgaAga66B.1.1.2940.007595
ORF3a254G254RGgaAga66B.1.1.330.002525
ORF3a254G254XGgaTga66B.1.4160.007614
ORF3a254G254XGgaTga66B.1.4500.068182
ORF3a254G254VgGagTa66B.1.5960.000523
ORF3a254G254XGgaTga66P.1.150.001394
ORF3a254G254XGgaTga55A.190.04717
ORF3a254G254RGgaCga55AY.1130.000712
ORF3a254G254VgGagTa55AY.230.000349
ORF3a254G254EgGagAa55AY.300.001979
ORF3a254G254VgGagTa55AY.420.000201
ORF3a254G254RGgaAga55B.1.1.2840.000537
ORF3a254G254VgGagTa55B.1.1.3480.003981
ORF3a254G254VgGagTa55B.1.1.5190.000199
ORF3a254G254RGgaAga55B.1.2210.000355
ORF3a254G254VgGagTa55B.1.360.00073
ORF3a254G254RGgaAga55B.1.390.019531
ORF3a254G254RGgaAga55B.1.4290.000118
ORF3a254G254VgGagTa55B.1.5260.000118
ORF3a254G254XGgaTga55B.1.5610.001985
ORF3a254G254GggAggT45P.10.000063
ORF3a254G254GggAggC15P.10.000016
ORF3a254G254RGgaAga55P.1.140.000239
ORF3a254G254XGgaTga55Q.80.000825
ORF3a254G254GggAggG34AY.1020.00008
ORF3a254G254GggAggT14AY.1020.000027
ORF3a254G254GggAggC44AY.1130.00057
ORF3a254G254GggAggG44AY.1150.020833
ORF3a254G254XGgaTga44AY.130.000644
ORF3a254G254VgGagTa44AY.200.000155
ORF3a254G254RGgaAga44AY.220.008368
ORF3a254G254RGgaAga34AY.260.000085
ORF3a254G254RGgaCga14AY.260.000028
ORF3a254G254delGGA---44AY.290.000063
ORF3a254G254VgGagTa44AY.290.000063
ORF3a254G254RGgaAga44AY.4.20.000087
ORF3a254G254RGgaAga44AY.420.000161
ORF3a254G254XGgaTga44AY.460.000416
ORF3a254G254EgGagAa44AY.46.40.000658
ORF3a254G254XGgaTga44AY.470.000124
ORF3a254G254RGgaAga24AY.50.000041
ORF3a254G254RGgaCga24AY.50.000041
ORF3a254G254RGgaAga44AY.610.000419
ORF3a254G254XGgaTga44AY.740.000463
ORF3a254G254RGgaAga44AY.750.000224
ORF3a254G254XGgaTga44B0.000511
ORF3a254G254GggAggC24B.10.000018
ORF3a254G254GggAggT24B.10.000018
ORF3a254G254RGgaAga44B.1.1.2160.003562
ORF3a254G254RGgaAga44B.1.1.2430.016327
ORF3a254G254IGGaATa44B.1.177.580.005326
ORF3a254G254RGgaAga44B.1.36.190.037037
ORF3a254G254RGgaAga44B.1.4560.013072
ORF3a254G254XGgaTga44B.1.4970.001259
ORF3a254G254delGGA---44B.1.5250.000453
ORF3a254G254GggAggG34B.1.5960.000261
ORF3a254G254GggAggC14B.1.5960.000087
ORF3a254G254EgGagAa44B.1.617.20.000015
ORF3a254G254RGgaAga44B.1.6230.002146
ORF3a254G254GggAggT44C.10.009569
ORF3a254G254XGgaTga44D.20.0003
ORF3a254G254XGgaTga44P.1.10.001271
ORF3a254G254XGgaTga44Q.10.000505
ORF3a254G254XGgaTga33AY.10.001187
ORF3a254G254XGgaTga33AY.1000.000138
ORF3a254G254RGgaAga33AY.1070.001398
ORF3a254G254GggAggT33AY.1140.000693
ORF3a254G254XGgaTga33AY.1190.000106
ORF3a254G254RGgaAga33AY.130.000483
ORF3a254G254XGgaTga33AY.290.000047
ORF3a254G254VgGagTa33AY.330.0002
ORF3a254G254XGgaTga33AY.4.50.000322
ORF3a254G254del1ggAgg-33AY.430.000013
ORF3a254G254delGGA---33AY.430.000013
ORF3a254G254XGgaTga33AY.46.10.00308
ORF3a254G254GggAggG33AY.46.50.000595
ORF3a254G254GggAggT33AY.470.000093
ORF3a254G254XGgaTga33AY.5.30.001012
ORF3a254G254XGgaTga33AY.530.000863
ORF3a254G254XGgaTga33AY.730.001996
ORF3a254G254VgGagTa33AY.770.003382
ORF3a254G254GggAggT33AY.80.001818
ORF3a254G254EgGagAa33AY.9.20.00011
ORF3a254G254VgGagTa33AY.980.000237
ORF3a254G254XGgaTga33AY.980.000237
ORF3a254G254AgGagCa33B.10.000027
ORF3a254G254del1ggAgg-33B.1.10.000054
ORF3a254G254XGgaTga33B.1.1.1010.03
ORF3a254G254VgGagTa33B.1.1.1940.014851
ORF3a254G254XGgaTga33B.1.1.2140.000166
ORF3a254G254VgGagTa33B.1.1.2140.000166
ORF3a254G254RGgaAga33B.1.1.2770.002276
ORF3a254G254RGgaAga33B.1.1.280.000934
ORF3a254G254VgGagTa33B.1.1.3120.005736
ORF3a254G254AgGagCa33B.1.1.70.000003
ORF3a254G254LGGaTTa33B.1.1.70.000003
ORF3a254G254del1ggAgg-33B.1.1.70.000003
ORF3a254G254XGgaTga33B.1.177.600.000655
ORF3a254G254RGgaAga33B.1.177.810.000568
ORF3a254G254XGgaTga33B.1.220.003953
ORF3a254G254VgGagTa33B.1.2580.0002
ORF3a254G254XGgaTga33B.1.2790.001541
ORF3a254G254XGgaTga33B.1.360.000438
ORF3a254G254AgGagCa33B.1.3990.005803
ORF3a254G254VgGagTa33B.1.4000.001287
ORF3a254G254XGgaTga33B.1.4060.018182
ORF3a254G254VgGagTa33B.1.4290.000071
ORF3a254G254del1ggAgg-33B.1.6210.000266
ORF3a254G254VgGagTa33B.1.6280.001057
ORF3a254G254RGgaAga33C.10.007177
ORF3a254G254RGgaAga33C.370.000348
ORF3a254G254XGgaTga33P.1.100.000808
ORF3a254G254XGgaTga33P.1.140.000143
ORF3a254G254XGgaTga33R.10.00027
ORF3a254G254VgGagTa22A0.000774
ORF3a254G254VgGagTa22A.2.50.000998
ORF3a254G254RGgaAga22AY.1100.000225
ORF3a254G254XGgaTga22AY.1180.000125
ORF3a254G254VgGagTa22AY.1180.000125
ORF3a254G254RGgaCga12AY.1180.000063
ORF3a254G254RGgaAga12AY.1180.000063
ORF3a254G254EgGagAa22AY.1200.000074
ORF3a254G254GggAggT22AY.1200.000074
ORF3a254G254XGgaTga22AY.120.10.000642
ORF3a254G254GggAggG22AY.1210.000271
ORF3a254G254XGgaTga22AY.1210.000271
ORF3a254G254VgGagTa22AY.1210.000271
ORF3a254G254XGgaTga22AY.200.000078
ORF3a254G254RGgaAga22AY.30.00002
ORF3a254G254GggAggG22AY.30.00002
ORF3a254G254XGgaTga22AY.300.000791
ORF3a254G254XGgaTga22AY.340.000194
ORF3a254G254VgGagTa22AY.370.000632
ORF3a254G254del1ggAgg-22AY.40.000003
ORF3a254G254delGGA---22AY.40.000003
ORF3a254G254XGgaTga22AY.4.20.000043
ORF3a254G254VgGagTa22AY.4.2.10.000298
ORF3a254G254EgGagAa22AY.4.40.000818
ORF3a254G254AgGagCa22AY.420.00008
ORF3a254G254GggAggC12AY.440.000006
ORF3a254G254GggAggG12AY.440.000006
ORF3a254G254XGgaTga22AY.450.000243
ORF3a254G254XGgaTga22AY.46.60.000144
ORF3a254G254RGgaAga22AY.470.000062
ORF3a254G254VgGagTa22AY.5.30.000675
ORF3a254G254RGgaCga22AY.5.40.000553
ORF3a254G254LGGaTTa22AY.5.40.000553
ORF3a254G254XGgaTga22AY.570.001312
ORF3a254G254GggAggT22AY.580.001815
ORF3a254G254XGgaTga22AY.610.00021
ORF3a254G254XGgaTga22AY.640.00119
ORF3a254G254XGgaTga22AY.650.001066
ORF3a254G254del1Gga-ga22AY.750.000112
ORF3a254G254XGgaTga22AY.750.000112
ORF3a254G254RGgaAga22AY.75.10.000361
ORF3a254G254VgGagTa22AY.90.000135
ORF3a254G254RGgaCga22AY.950.001522
ORF3a254G254GggAggG22AY.950.001522
ORF3a254G254XGgaTga22AY.98.10.000097
ORF3a254G254GggAggC12B.1.10.000018
ORF3a254G254IGGaATa12B.1.10.000018
ORF3a254G254GggAggT12B.1.10.000018
ORF3a254G254IGGAATT12B.1.10.000018
ORF3a254G254XGgaTga22B.1.1.2070.002364
ORF3a254G254RGgaCga22B.1.1.2140.000111
ORF3a254G254AgGagCa22B.1.1.2220.000408
ORF3a254G254VgGagTa22B.1.1.2510.015873
ORF3a254G254XGgaTga22B.1.1.3060.000877
ORF3a254G254XGgaTga22B.1.1.3260.003521
ORF3a254G254RGgaAga22B.1.1.4180.045455
ORF3a254G254XGgaTga22B.1.1.4320.002532
ORF3a254G254XGgaTga22B.1.1.500.001358
ORF3a254G254AgGagCa22B.1.1.5190.000079
ORF3a254G254XGgaTga22B.1.1110.00235
ORF3a254G254VgGagTa22B.1.1600.000062
ORF3a254G254XGgaTga22B.1.160.160.001859
ORF3a254G254RGgaAga22B.1.1770.000026
ORF3a254G254EgGagAa22B.1.1770.000026
ORF3a254G254VgGagTa22B.1.177.210.000153
ORF3a254G254GggAggG22B.1.2340.000264
ORF3a254G254del1ggAgg-22B.1.2430.000139
ORF3a254G254VgGagTa22B.1.2430.000139
ORF3a254G254VgGagTa22B.1.258.170.000208
ORF3a254G254RGgaAga22B.1.258.170.000208
ORF3a254G254del1ggAgg-22B.1.258.170.000208
ORF3a254G254VgGagTa22B.1.3510.000059
ORF3a254G254RGgaAga12B.1.3510.00003
ORF3a254G254RGgaCga12B.1.3510.00003
ORF3a254G254RGgaCga22B.1.360.000292
ORF3a254G254EgGagAa22B.1.4220.001625
ORF3a254G254EgGagAa22B.1.4270.000101
ORF3a254G254XGgaTga22B.1.4280.002041
ORF3a254G254XGgaTga22B.1.438.10.000215
ORF3a254G254XGgaTga22B.1.466.20.000782
ORF3a254G254XGgaTga12B.1.5030.002488
ORF3a254G254XGGaTAa12B.1.5030.002488
ORF3a254G254XGgaTga22B.1.5250.000226
ORF3a254G254VgGagTa22B.1.5440.012048
ORF3a254G254VgGagTa22B.1.5820.000981
ORF3a254G254XGgaTga22B.1.5990.007299
ORF3a254G254RGgaAga22B.1.6090.000959
ORF3a254G254GggAggG22B.1.617.10.000258
ORF3a254G254del1Gga-ga22B.1.617.20.000008
ORF3a254G254delGGA---22B.1.617.20.000008
ORF3a254G254XGgaTga22B.1.6280.000705
ORF3a254G254RGgaCga22B.60.00182
ORF3a254G254VgGagTa22C.180.005181
ORF3a254G254GggAggG12C.36.3.10.002717
ORF3a254G254GggAggT12C.36.3.10.002717
ORF3a254G254XGgaTga22N.50.003534
ORF3a254G254GggAggT22P.1.70.000639
ORF3a254G254VgGagTa22Q.80.00033
ORF3a254G254RGgaAga12Q.80.000165
ORF3a254G254RGgaCga12Q.80.000165
ORF3a254G254RGgaCga110.055556
ORF3a254G254XGgaTga11A0.000387
ORF3a254G254XGgaTga11A.10.000282
ORF3a254G254RGgaCga11A.2.20.001689
ORF3a254G254RGgaAga11A.2.50.000499
ORF3a254G254RGgaAga11A.210.00277
ORF3a254G254XGgaTga11A.23.10.000704
ORF3a254G254GggAggG11A.270.001656
ORF3a254G254RGgaAga11A.50.001923
ORF3a254G254del2gGAg--11All0
ORF3a254G254XGgaTga11AT.10.005128
ORF3a254G254RGgaAga11AY.1020.000027
ORF3a254G254AgGagCa11AY.1030.000006
ORF3a254G254VgGagTa11AY.1070.000466
ORF3a254G254VgGagTa11AY.1080.001103
ORF3a254G254XGgaTga11AY.1130.000142
ORF3a254G254RGgaAga11AY.1170.000085
ORF3a254G254VgGagTa11AY.1170.000085
ORF3a254G254RGgaCga11AY.1190.000035
ORF3a254G254RGgaCga11AY.1210.000135
ORF3a254G254XGgaTga11AY.140.000088
ORF3a254G254VgGagTa11AY.16.10.00047
ORF3a254G254RGgaCga11AY.16.10.00047
ORF3a254G254GggAggT11AY.170.008197
ORF3a254G254VgGagTa11AY.210.001898
ORF3a254G254GggAggC11AY.230.00007
ORF3a254G254XGgaTga11AY.240.000431
ORF3a254G254RGgaCga11AY.240.000431
ORF3a254G254EgGagAa11AY.250.000006
ORF3a254G254VgGagTa11AY.260.000028
ORF3a254G254EgGagAa11AY.270.000065
ORF3a254G254XGgaTga11AY.270.000065
ORF3a254G254GggAggG11AY.290.000016
ORF3a254G254AgGagCa11AY.30.00001
ORF3a254G254VgGagTa11AY.3.10.000085
ORF3a254G254XGgaTga11AY.320.000532
ORF3a254G254RGgaAga11AY.340.000097
ORF3a254G254VgGagTa11AY.340.000097
ORF3a254G254AgGagCa11AY.34.10.00051
ORF3a254G254XGgaTga11AY.350.000233
ORF3a254G254RGgaAga11AY.350.000233
ORF3a254G254VgGagTa11AY.360.000148
ORF3a254G254XGgaTga11AY.360.000148
ORF3a254G254EgGagAa11AY.360.000148
ORF3a254G254GggAggG11AY.390.000025
ORF3a254G254RGgaAga11AY.390.000025
ORF3a254G254EgGagAa11AY.390.000025
ORF3a254G254VgGagTa11AY.39.10.00004
ORF3a254G254RGgaAga11AY.39.10.00004
ORF3a254G254GggAggC11AY.4.20.000022
ORF3a254G254RGgaCga11AY.4.50.000107
ORF3a254G254RGgaAga11AY.400.000964
ORF3a254G254VgGagTa11AY.410.000294
ORF3a254G254GggAggG11AY.420.00004
ORF3a254G254VgGagTa11AY.450.000122
ORF3a254G254RGgaAga11AY.460.000104
ORF3a254G254XGgaTga11AY.46.30.000934
ORF3a254G254VgGagTa11AY.46.60.000072
ORF3a254G254XGgaTga11AY.480.000465
ORF3a254G254XGgaTga11AY.510.000909
ORF3a254G254VgGagTa11AY.510.000909
ORF3a254G254RGgaAga11AY.540.000095
ORF3a254G254XGgaTga11AY.550.000917
ORF3a254G254RGgaAga11AY.560.001605
ORF3a254G254RGgaAga11AY.580.000907
ORF3a254G254GggAggG11AY.60.000041
ORF3a254G254VgGagTa11AY.60.000041
ORF3a254G254VgGagTa11AY.610.000105
ORF3a254G254GggAggG11AY.640.000595
ORF3a254G254VgGagTa11AY.650.000533
ORF3a254G254XGgaTga11AY.670.000464
ORF3a254G254delGGA---11AY.670.000464
ORF3a254G254delGGA---11AY.680.000274
ORF3a254G254XGgaTga11AY.680.000274
ORF3a254G254RGgaAga11AY.690.000187
ORF3a254G254GggAggC11AY.70.000196
ORF3a254G254XGgaTga11AY.7.20.000559
ORF3a254G254EgGagAa11AY.700.000209
ORF3a254G254RGgaCga11AY.700.000209
ORF3a254G254XGgaTga11AY.700.000209
ORF3a254G254RGgaCga11AY.710.000475
ORF3a254G254EgGagAa11AY.740.000116
ORF3a254G254delGGA---11AY.750.000056
ORF3a254G254VgGagTa11AY.750.000056
ORF3a254G254GggAggC11AY.75.10.00018
ORF3a254G254XGgaTga11AY.840.000437
ORF3a254G254RGgaCga11AY.860.00083
ORF3a254G254GggAggT11AY.870.000833
ORF3a254G254XGgaTga11AY.9.10.000084
ORF3a254G254RGgaAga11AY.9.10.000084
ORF3a254G254VgGagTa11AY.9.10.000084
ORF3a254G254RGgaAga11AY.9.20.000037
ORF3a254G254VgGagTa11AY.900.000684
ORF3a254G254XGgaTga11AY.910.00073
ORF3a254G254VgGagTa11AY.910.00073
ORF3a254G254RGgaAga11AY.940.000443
ORF3a254G254delGGA---11AY.980.000079
ORF3a254G254RGgaAga11AY.98.10.000048
ORF3a254G254delGGA---11AY.98.10.000048
ORF3a254G254VgGagTa11AY.98.10.000048
ORF3a254G254EgGagAa11AY.99.20.000092
ORF3a254G254XGgaTga11AZ.20.000821
ORF3a254G254XGgaTga11AZ.30.00152
ORF3a254G254EgGagAa11B0.000128
ORF3a254G254del1ggAgg-11B0.000128
ORF3a254G254EgGagAa11B.10.000009
ORF3a254G254LGGaTTa11B.1.10.000018
ORF3a254G254XGgaTga11B.1.1.10.000327
ORF3a254G254RGgaAga11B.1.1.10.000327
ORF3a254G254RGgaAga11B.1.1.1330.008475
ORF3a254G254RGgaAga11B.1.1.1410.002012
ORF3a254G254XGgaTga11B.1.1.1410.002012
ORF3a254G254XGgaTga11B.1.1.1530.001095
ORF3a254G254XGgaTga11B.1.1.1580.012195
ORF3a254G254del1ggAgg-11B.1.1.1610.003534
ORF3a254G254VgGagTa11B.1.1.1610.003534
ORF3a254G254RGgaAga11B.1.1.1700.001247
ORF3a254G254XGgaTga11B.1.1.1740.003378
ORF3a254G254XGgaTga11B.1.1.1760.000439
ORF3a254G254RGgaAga11B.1.1.1890.001513
ORF3a254G254VgGagTa11B.1.1.2070.001182
ORF3a254G254XGgaTga11B.1.1.2160.00089
ORF3a254G254EgGagAa11B.1.1.2160.00089
ORF3a254G254GggAggG11B.1.1.2220.000204
ORF3a254G254AgGagCa11B.1.1.2280.003049
ORF3a254G254RGgaCga11B.1.1.250.000569
ORF3a254G254XGgaTga11B.1.1.250.000569
ORF3a254G254GggAggC11B.1.1.280.000311
ORF3a254G254VgGagTa11B.1.1.2940.001266
ORF3a254G254VgGagTa11B.1.1.3160.000925
ORF3a254G254VgGagTa11B.1.1.3170.000412
ORF3a254G254VgGagTa11B.1.1.3220.008772
ORF3a254G254VgGagTa11B.1.1.3260.001761
ORF3a254G254XGgaTga11B.1.1.3290.003846
ORF3a254G254VgGagTa11B.1.1.330.000421
ORF3a254G254XGgaTga11B.1.1.3480.000796
ORF3a254G254XGgaTga11B.1.1.3540.004386
ORF3a254G254XGgaTga11B.1.1.3690.000446
ORF3a254G254RGgaAga11B.1.1.370.000193
ORF3a254G254XGgaTga11B.1.1.3860.066667
ORF3a254G254RGgaAga11B.1.1.4110.014706
ORF3a254G254VgGagTa11B.1.1.4170.002703
ORF3a254G254VgGagTa11B.1.1.4340.000349
ORF3a254G254XGgaTga11B.1.1.5070.008696
ORF3a254G254XGgaTga11B.1.1.570.011494
ORF3a254G254GggAggG11B.1.1.710.006061
ORF3a254G254XGgaTga11B.1.1.990.02381
ORF3a254G254XGgaTga11B.1.1260.001276
ORF3a254G254EgGagAa11B.1.160.160.000929
ORF3a254G254GggAggG11B.1.160.330.004425
ORF3a254G254GggAggG11B.1.1770.000013
ORF3a254G254delGGA---11B.1.1770.000013
ORF3a254G254XGgaTga11B.1.177.210.000076
ORF3a254G254RGgaAga11B.1.177.360.016129
ORF3a254G254RGgaAga11B.1.177.40.000211
ORF3a254G254RGgaAga11B.1.177.440.000519
ORF3a254G254XGgaTga11B.1.177.450.000381
ORF3a254G254RGgaAga11B.1.177.600.000218
ORF3a254G254XGgaTga11B.1.177.690.001484
ORF3a254G254RGgACgG11B.1.177.70.000165
ORF3a254G254XGgaTga11B.1.177.70.000165
ORF3a254G254VgGagTa11B.1.177.730.000566
ORF3a254G254RGgaAga11B.1.177.730.000566
ORF3a254G254XGgaTga11B.1.177.730.000566
ORF3a254G254VgGagTa11B.1.177.830.001481
ORF3a254G254EgGagAa11B.1.20.000009
ORF3a254G254delGGA---11B.1.20.000009
ORF3a254G254GggAggC11B.1.20.000009
ORF3a254G254AgGagCa11B.1.20.000009
ORF3a254G254VgGagTa11B.1.2100.002132
ORF3a254G254RGgaAga11B.1.2340.000132
ORF3a254G254VgGagTa11B.1.2340.000132
ORF3a254G254XGgaTga11B.1.2370.004975
ORF3a254G254XGgaTga11B.1.240.10.025
ORF3a254G254EgGagAa11B.1.2430.00007
ORF3a254G254XGgaTga11B.1.2580.000067
ORF3a254G254XGgaTga11B.1.258.170.000104
ORF3a254G254XGgaTga11B.1.30.002618
ORF3a254G254VgGagTa11B.1.3130.006579
ORF3a254G254RGgaAga11B.1.3240.001605
ORF3a254G254RGgaAga11B.1.3490.000715
ORF3a254G254VgGagTa11B.1.351.20.000303
ORF3a254G254RGgaAga11B.1.36.10.00114
ORF3a254G254RGgaAga11B.1.36.180.00042
ORF3a254G254VgGagTa11B.1.36.290.000517
ORF3a254G254RGgaAga11B.1.3600.012658
ORF3a254G254XGgaTga11B.1.3670.000792
ORF3a254G254XGgaTga11B.1.3690.000285
ORF3a254G254XGgaTga11B.1.3750.00082
ORF3a254G254RGgaAga11B.1.3770.004566
ORF3a254G254XGgaTga11B.1.3910.001127
ORF3a254G254RGgaAga11B.1.3910.001127
ORF3a254G254XGgaTga11B.1.3960.000706
ORF3a254G254RGgaAga11B.1.4000.000429
ORF3a254G254XGgaTga11B.1.4220.000812
ORF3a254G254XGgaTga11B.1.4270.00005
ORF3a254G254VgGagTa11B.1.4270.00005
ORF3a254G254GggAggC11B.1.4290.000024
ORF3a254G254EgGagAa11B.1.4290.000024
ORF3a254G254XGgaTga11B.1.4410.009615
ORF3a254G254RGgaCga11B.1.4520.013699
ORF3a254G254VgGagTa11B.1.466.20.000391
ORF3a254G254delGGA---11B.1.4970.000315
ORF3a254G254RGgaCga11B.1.4990.00105
ORF3a254G254EgGagAa11B.1.5030.002488
ORF3a254G254XGgaTga11B.1.5110.034483
ORF3a254G254RGgaAga11B.1.5250.000113
ORF3a254G254GggAggC11B.1.5260.000024
ORF3a254G254del1ggAgg-11B.1.5260.000024
ORF3a254G254VgGagTa11B.1.5300.007143
ORF3a254G254RGgaAga11B.1.5380.008065
ORF3a254G254RGgaAga11B.1.5510.00129
ORF3a254G254XGgaTga11B.1.5600.00463
ORF3a254G254VgGagTa11B.1.5610.000397
ORF3a254G254RGgaAga11B.1.5640.000426
ORF3a254G254VgGagTa11B.1.5680.001111
ORF3a254G254VgGagTa11B.1.5800.004065
ORF3a254G254XGgaTga11B.1.5800.004065
ORF3a254G254XGgaTga11B.1.5890.007576
ORF3a254G254RGgaAga11B.1.5950.000261
ORF3a254G254del1Gga-ga11B.1.5960.000087
ORF3a254G254RGgaAga11B.1.5960.000087
ORF3a254G254GggAggT11B.1.5990.00365
ORF3a254G254XGgaTga11B.1.6050.005952
ORF3a254G254RGgaAga11B.1.6120.002653
ORF3a254G254XGgaTga11B.1.617.10.000129
ORF3a254G254VgGagTa11B.1.6190.000871
ORF3a254G254AgGagCa11B.1.6210.000089
ORF3a254G254del2gGAg--11B.1.6210.000089
ORF3a254G254EgGagAa11B.1.6210.000089
ORF3a254G254RGgaAga11B.1.6210.000089
ORF3a254G254VgGagTa11B.1.621.10.000506
ORF3a254G254RGgaAga11B.1.621.10.000506
ORF3a254G254XGgaTga11B.1.6230.000536
ORF3a254G254VgGagTa11B.1.88.10.004808
ORF3a254G254VgGagTa11B.1.930.000934
ORF3a254G254XGgaTga11B.230.002924
ORF3a254G254EgGagAa11B.400.000364
ORF3a254G254RGgaAga11B.400.000364
ORF3a254G254GggAggT11C.1.20.004255
ORF3a254G254RGgaAga11C.140.004329
ORF3a254G254XGgaTga11C.160.00106
ORF3a254G254GggAggG11C.36.30.000567
ORF3a254G254AgGagCa11C.370.000116
ORF3a254G254EgGagAa11C.370.000116
ORF3a254G254VgGagTa11C.370.000116
ORF3a254G254EgGagAa11D.20.000075
ORF3a254G254RGgaAga11K.20.04
ORF3a254G254VgGagTa11N.50.001767
ORF3a254G254XGgaTga11P.1.10.10.00813
ORF3a254G254XGgaTga11P.1.120.000484
ORF3a254G254VgGagTa11P.1.150.000232
ORF3a254G254RGgaAga11P.1.160.000374
ORF3a254G254VgGagTa11P.1.160.000374
ORF3a254G254XGgaTga11P.1.20.001156
ORF3a254G254VgGagTa11P.20.000187
ORF3a254G254RGgACgG11P.20.000187
ORF3a254G254delGGA---11P.20.000187
ORF3a254G254VgGagTa11Q.60.006623
ORF3a254G254RGgaAga11R.10.00009
ORF3a254G254delGGA---11R.10.00009
ORF3a254G254XGgaTga11U.20.008772
ORF3a254G254XGgaTga11W.30.005263