CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 253

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a253S253PnonsynTccCcc1150881149660.9989426149-26151
ORF3a253S253PnonsynTcCCcT1150881060.00092103426149-26151
ORF3a253S253PnonsynTcCCcA115088150.00013033526149-26151
ORF3a253S253PnonsynTcCCcG11508810.00000868926149-26151
ORF3a253S253SsyntcCtcT12446107710.86541926149-26151
ORF3a253S253SsyntcCtcA1244616250.13056426149-26151
ORF3a253S253SsyntcCtcG12446500.0040173526149-26151
ORF3a253S253FnonsyntCctTc9829810.99898226149-26151
ORF3a253S253FnonsyntCCtTT98210.0010183326149-26151
ORF3a253S253AnonsynTccGcc309309126149-26151
ORF3a253S253LnonsynTCcCTc1311300.99236626149-26151
ORF3a253S253LnonsyntCCtTG13110.0076335926149-26151
ORF3a253S253YnonsyntCctAc4646126149-26151
ORF3a253S253TnonsynTccAcc4444126149-26151
ORF3a253S253deldelTCC---3434126149-26151
ORF3a253S253CnonsyntCctGc1212126149-26151
ORF3a253S253HnonsynTCcCAc99126149-26151
ORF3a253S253del1delTcCGc-420.526149-26151
ORF3a253S253del1delTcc-cc410.2526149-26151
ORF3a253S253del1deltCct-c410.2526149-26151
ORF3a253S253XnonsyntCCtAA22126149-26151
ORF3a253S253InonsynTCcATc22126149-26151
ORF3a253S253EnonsynTCCGAA11126149-26151
ORF3a253S253RnonsynTCCCGT11126149-26151
ORF3a253S253NnonsynTCcAAc11126149-26151

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a253S253PTccCcc114966115088All0.021989
ORF3a253S253PTcCCcT106115088All0.00002
ORF3a253S253PTcCCcA15115088All0.000003
ORF3a253S253PTcCCcG1115088All0
ORF3a253S253PTccCcc6267362765P.10.98735
ORF3a253S253PTcCCcT8862765P.10.001386
ORF3a253S253PTcCCcA362765P.10.000047
ORF3a253S253PTcCCcG162765P.10.000016
ORF3a253S253PTccCcc2087120883P.1.140.997658
ORF3a253S253PTcCCcT720883P.1.140.000335
ORF3a253S253PTcCCcA520883P.1.140.000239
ORF3a253S253StcCtcT1077112446All0.00206
ORF3a253S253StcCtcA162512446All0.000311
ORF3a253S253StcCtcG5012446All0.00001
ORF3a253S253PTccCcc61076107P.1.170.987868
ORF3a253S253PTccCcc42304235P.1.150.982807
ORF3a253S253PTcCCcT54235P.1.150.001162
ORF3a253S253PTccCcc36593659P.1.100.985988
ORF3a253S253StcCtcT32703270AY.1200.121575
ORF3a253S253PTccCcc31123112P.1.70.993614
ORF3a253S253PTccCcc28682876P.1.10.911055
ORF3a253S253PTcCCcA72876P.1.10.002224
ORF3a253S253PTcCCcT12876P.1.10.000318
ORF3a253S253StcCtcT17802762AY.40.00277
ORF3a253S253StcCtcA9822762AY.40.001528
ORF3a253S253PTccCcc26322632P.1.160.984661
ORF3a253S253PTccCcc18891890P.1.120.914327
ORF3a253S253PTcCCcT11890P.1.120.000484
ORF3a253S253StcCtcT10901417B.1.1.70.000976
ORF3a253S253StcCtcA2811417B.1.1.70.000252
ORF3a253S253StcCtcG461417B.1.1.70.000041
ORF3a253S253PTccCcc11411141P.1.17.10.99825
ORF3a253S253PTccCcc10981098P.1.130.986523
ORF3a253S253PTccCcc10231023P.1.40.999023
ORF3a253S253FtCctTc981982All0.000188
ORF3a253S253FtCCtTT1982All0
ORF3a253S253PTccCcc861861P.1.20.995376
ORF3a253S253FtCctTc685685B.1.160.80.882732
ORF3a253S253StcCtcT493517B.1.617.20.001856
ORF3a253S253StcCtcA24517B.1.617.20.00009
ORF3a253S253PTccCcc508508P.1.60.988327
ORF3a253S253StcCtcT496496B.1.177.110.842105
ORF3a253S253StcCtcT466470AY.440.002836
ORF3a253S253StcCtcA4470AY.440.000024
ORF3a253S253PTccCcc312314B.1.1.280.097106
ORF3a253S253PTcCCcT2314B.1.1.280.000622
ORF3a253S253ATccGcc309309All0.000059
ORF3a253S253StcCtcT290291AY.360.042982
ORF3a253S253StcCtcG1291AY.360.000148
ORF3a253S253StcCtcT242242AY.90.016358
ORF3a253S253ATccGcc227227AE.80.111002
ORF3a253S253PTccCcc209209B.1.4270.010554
ORF3a253S253PTccCcc209209P.1.81
ORF3a253S253PTccCcc206206P.1.90.990385
ORF3a253S253StcCtcT173176B.1.3510.005143
ORF3a253S253StcCtcA3176B.1.3510.000089
ORF3a253S253PTccCcc168169B.10.001539
ORF3a253S253PTcCCcT1169B.10.000009
ORF3a253S253PTccCcc153153B.1.10.002776
ORF3a253S253StcCtcT128147B.1.20.001127
ORF3a253S253StcCtcA19147B.1.20.000167
ORF3a253S253StcCtcT141143AY.30.001402
ORF3a253S253StcCtcA2143AY.30.00002
ORF3a253S253LTCcCTc130131All0.000025
ORF3a253S253LtCCtTG1131All0
ORF3a253S253StcCtcT127127AY.50.002622
ORF3a253S253StcCtcT114124AY.430.000505
ORF3a253S253StcCtcA10124AY.430.000044
ORF3a253S253StcCtcT102115B.10.000934
ORF3a253S253StcCtcA13115B.10.000119
ORF3a253S253LTCcCTc115115P.1.10.036531
ORF3a253S253FtCctTc110110AY.1030.000683
ORF3a253S253StcCtcT107109B.1.1.3560.91453
ORF3a253S253StcCtcA2109B.1.1.3560.017094
ORF3a253S253PTccCcc108108P.1.10.10.878049
ORF3a253S253PTccCcc103103B.1.1.70.000092
ORF3a253S253StcCtcT9898B.1.2340.01293
ORF3a253S253PTccCcc9898P.1.111
ORF3a253S253StcCtcT9494AY.1030.000584
ORF3a253S253StcCtcA6087B.1.4290.001412
ORF3a253S253StcCtcT2787B.1.4290.000635
ORF3a253S253StcCtcT8787B.1.5960.007581
ORF3a253S253StcCtcT4270B.1.1770.000553
ORF3a253S253StcCtcA2870B.1.1770.000369
ORF3a253S253PTccCcc6969AY.40.000107
ORF3a253S253StcCtcT6465AY.46.60.004621
ORF3a253S253StcCtcA165AY.46.60.000072
ORF3a253S253StcCtcT6163AY.420.002454
ORF3a253S253StcCtcA263AY.420.00008
ORF3a253S253PTccCcc5858AY.250.000349
ORF3a253S253StcCtcT5454AY.1060.018084
ORF3a253S253StcCtcT4554AY.250.000271
ORF3a253S253StcCtcA954AY.250.000054
ORF3a253S253YtCctAc4646All0.000009
ORF3a253S253StcCtcT3845AY.390.000939
ORF3a253S253StcCtcA745AY.390.000173
ORF3a253S253StcCtcT4545B.1.1.5190.001787
ORF3a253S253TTccAcc4444All0.000008
ORF3a253S253StcCtcT4242AY.330.002805
ORF3a253S253StcCtcT4141AY.1210.005548
ORF3a253S253PTccCcc4041AY.440.000243
ORF3a253S253PTcCCcT141AY.440.000006
ORF3a253S253StcCtcT3340AY.200.001283
ORF3a253S253StcCtcA740AY.200.000272
ORF3a253S253StcCtcT3839AY.260.001076
ORF3a253S253StcCtcA139AY.260.000028
ORF3a253S253StcCtcT3939B.1.6310.131313
ORF3a253S253StcCtcT3335AY.60.001357
ORF3a253S253StcCtcA235AY.60.000082
ORF3a253S253delTCC---3434All0.000007
ORF3a253S253PTccCcc3434AY.930.009285
ORF3a253S253StcCtcA3233AY.3.10.002728
ORF3a253S253StcCtcT133AY.3.10.000085
ORF3a253S253PTccCcc3232AY.30.000318
ORF3a253S253FtCctTc3232B.1.1.70.000029
ORF3a253S253StcCtcT3131B.1.2790.015922
ORF3a253S253PTccCcc2929B.1.1.5280.139423
ORF3a253S253PTccCcc2929P.1.31
ORF3a253S253StcCtcT2528AY.1020.000663
ORF3a253S253StcCtcA328AY.1020.00008
ORF3a253S253StcCtcT2728B.1.10.00049
ORF3a253S253StcCtcA128B.1.10.000018
ORF3a253S253PTccCcc2828B.1.617.20.000105
ORF3a253S253ATccGcc2727AY.1030.000168
ORF3a253S253StcCtcT2627AY.610.002724
ORF3a253S253StcCtcA127AY.610.000105
ORF3a253S253StcCtcT2727B.1.2400.00582
ORF3a253S253StcCtcA1724B.1.1600.00053
ORF3a253S253StcCtcT724B.1.1600.000218
ORF3a253S253PTccCcc2424P.1.10.21
ORF3a253S253PTccCcc2222B.1.20.000194
ORF3a253S253FtCctTc2222B.1.5260.000517
ORF3a253S253TTccAcc2222P.1.150.005112
ORF3a253S253PTccCcc2121B.1.36.210.045356
ORF3a253S253StcCtcT1921B.1.4270.000959
ORF3a253S253StcCtcA221B.1.4270.000101
ORF3a253S253StcCtcT2021B.1.5260.00047
ORF3a253S253StcCtcA121B.1.5260.000024
ORF3a253S253FtCctTc1919AY.440.000116
ORF3a253S253PTccCcc1919C.370.002205
ORF3a253S253StcCtcT1119Q.80.001814
ORF3a253S253StcCtcA819Q.80.001319
ORF3a253S253PTccCcc1818A.2.50.008982
ORF3a253S253StcCtcT1618AY.290.000252
ORF3a253S253StcCtcA218AY.290.000032
ORF3a253S253StcCtcT1718AY.4.20.000369
ORF3a253S253StcCtcA118AY.4.20.000022
ORF3a253S253StcCtcT1717AY.1110.003114
ORF3a253S253StcCtcT1117AY.1190.000388
ORF3a253S253StcCtcA617AY.1190.000212
ORF3a253S253StcCtcT1717AY.980.001343
ORF3a253S253StcCtcT1416AY.1000.000644
ORF3a253S253StcCtcA216AY.1000.000092
ORF3a253S253StcCtcA1616AY.20.005698
ORF3a253S253YtCctAc1616AY.40.000025
ORF3a253S253StcCtcT1216B.1.2210.000852
ORF3a253S253StcCtcA416B.1.2210.000284
ORF3a253S253FtCctTc1515B.10.000137
ORF3a253S253StcCtcT1515B.1.1.3030.041436
ORF3a253S253StcCtcT1515B.1.6210.001328
ORF3a253S253StcCtcT1314AY.750.000728
ORF3a253S253StcCtcA114AY.750.000056
ORF3a253S253PTccCcc1414B.1.1770.000184
ORF3a253S253StcCtcT1313AY.100.006889
ORF3a253S253PTccCcc1313AY.1030.000081
ORF3a253S253PTccCcc1313AY.260.000368
ORF3a253S253FtCctTc1313AY.40.00002
ORF3a253S253PTccCcc1313AY.430.000058
ORF3a253S253LTCcCTc1313P.10.000205
ORF3a253S253PTccCcc1313P.1.51
ORF3a253S253CtCctGc1212All0.000002
ORF3a253S253StcCtcT611AY.75.10.001082
ORF3a253S253StcCtcA511AY.75.10.000902
ORF3a253S253StcCtcT1111AY.9.20.000404
ORF3a253S253StcCtcT1111B.1.5680.012222
ORF3a253S253PTccCcc1010AY.60.000411
ORF3a253S253StcCtcT1010AY.600.009381
ORF3a253S253PTccCcc1010AY.9.20.000367
ORF3a253S253StcCtcT1010B.1.177.460.009183
ORF3a253S253StcCtcT1010B.1.177.770.007262
ORF3a253S253StcCtcT1010B.1.220.013175
ORF3a253S253StcCtcT1010B.1.2430.000696
ORF3a253S253StcCtcT710B.1.360.001021
ORF3a253S253StcCtcA310B.1.360.000438
ORF3a253S253FtCctTc1010B.1.4740.019011
ORF3a253S253PTccCcc1010P.20.001866
ORF3a253S253HTCcCAc99All0.000002
ORF3a253S253StcCtcT89AY.1130.001139
ORF3a253S253StcCtcA19AY.1130.000142
ORF3a253S253StcCtcT99AY.120.20.011568
ORF3a253S253StcCtcT69AY.140.000528
ORF3a253S253StcCtcA39AY.140.000264
ORF3a253S253YtCctAc99AY.290.000142
ORF3a253S253StcCtcT89AY.460.000833
ORF3a253S253StcCtcA19AY.460.000104
ORF3a253S253StcCtcT99AY.960.018672
ORF3a253S253StcCtcT99B.1.258.170.000936
ORF3a253S253StcCtcT99B.1.36.10.010262
ORF3a253S253FtCctTc99B.1.4290.000212
ORF3a253S253StcCtcT99B.1.438.10.000965
ORF3a253S253StcCtcT88AY.1140.001849
ORF3a253S253StcCtcT68AY.1170.000507
ORF3a253S253StcCtcA28AY.1170.000169
ORF3a253S253StcCtcT88AY.230.000558
ORF3a253S253StcCtcT88AY.39.10.000317
ORF3a253S253TTccAcc88AY.430.000035
ORF3a253S253PTccCcc88B.1.1.1610.028269
ORF3a253S253StcCtcT88B.1.1.2220.001632
ORF3a253S253YtCctAc88B.1.1.70.000007
ORF3a253S253PTccCcc88B.1.2210.000568
ORF3a253S253PTccCcc88B.1.3490.005718
ORF3a253S253PTccCcc88B.1.4290.000188
ORF3a253S253PTccCcc88B.1.6210.000708
ORF3a253S253StcCtcT88C.360.007286
ORF3a253S253StcCtcT67AY.160.002278
ORF3a253S253StcCtcA17AY.160.00038
ORF3a253S253PTccCcc77AY.200.000272
ORF3a253S253FtCctTc77AY.260.000198
ORF3a253S253delTCC---77B.1.1.70.000006
ORF3a253S253ATccGcc77B.1.20.000062
ORF3a253S253StcCtcA77B.1.4090.005469
ORF3a253S253StcCtcT47B.1.466.20.001565
ORF3a253S253StcCtcA37B.1.466.20.001174
ORF3a253S253PTccCcc77B.1.5260.000165
ORF3a253S253StcCtcT77B.1.6280.002467
ORF3a253S253StcCtcT77B.1.6370.000512
ORF3a253S253HTCcCAc77P.1.170.001132
ORF3a253S253StcCtcT66AY.1080.006615
ORF3a253S253StcCtcT56AY.470.000156
ORF3a253S253StcCtcA16AY.470.000031
ORF3a253S253StcCtcT66AY.550.005505
ORF3a253S253StcCtcT66B0.000767
ORF3a253S253StcCtcA56B.1.1.3480.003981
ORF3a253S253StcCtcT16B.1.1.3480.000796
ORF3a253S253PTccCcc66B.1.2340.000792
ORF3a253S253PTccCcc66B.1.258.30.01005
ORF3a253S253StcCtcT66B.1.4650.022814
ORF3a253S253PTccCcc66B.1.6370.000438
ORF3a253S253ATccGcc55AY.116.10.001557
ORF3a253S253StcCtcT55AY.4.2.10.000745
ORF3a253S253delTCC---55AY.430.000022
ORF3a253S253StcCtcT45AY.46.40.000658
ORF3a253S253StcCtcA15AY.46.40.000165
ORF3a253S253StcCtcA45AY.880.003537
ORF3a253S253StcCtcT15AY.880.000884
ORF3a253S253StcCtcT55AY.890.02451
ORF3a253S253StcCtcT55AY.99.20.000461
ORF3a253S253YtCctAc55B.10.000046
ORF3a253S253PTccCcc55B.1.1.5070.043478
ORF3a253S253FtCctTc55B.1.3690.001426
ORF3a253S253ATccGcc55B.1.617.20.000019
ORF3a253S253StcCtcT55B.1.910.010373
ORF3a253S253StcCtcT55C.370.00058
ORF3a253S253StcCtcT55D.20.000375
ORF3a253S253FtCctTc55P.1.10.001588
ORF3a253S253StcCtcT55Q.10.000632
ORF3a253S253StcCtcT55R.10.00045
ORF3a253S253delTCC---440.222222
ORF3a253S253StcCtcT44A.2.5.10.019231
ORF3a253S253del1TcCGc-24All0
ORF3a253S253del1Tcc-cc14All0
ORF3a253S253del1tCct-c14All0
ORF3a253S253ATccGcc44AY.1050.002572
ORF3a253S253PTccCcc44AY.270.000259
ORF3a253S253PTccCcc44AY.4.20.000087
ORF3a253S253StcCtcT44AY.4.50.00043
ORF3a253S253StcCtcT44AY.46.20.002541
ORF3a253S253PTccCcc44AY.50.000083
ORF3a253S253StcCtcT44AY.700.000834
ORF3a253S253StcCtcT44B.1.1.330.001684
ORF3a253S253ATccGcc44B.1.1.70.000004
ORF3a253S253StcCtcA44B.1.177.350.002764
ORF3a253S253StcCtcT44B.1.4970.001259
ORF3a253S253delTCC---44B.1.5250.000453
ORF3a253S253StcCtcT44B.1.5610.001588
ORF3a253S253TTccAcc44B.1.617.20.000015
ORF3a253S253TTccAcc44P.10.000063
ORF3a253S253FtCctTc33AY.1020.00008
ORF3a253S253StcCtcT33AY.130.000483
ORF3a253S253PTccCcc33AY.130.000483
ORF3a253S253StcCtcT33AY.240.001293
ORF3a253S253PTccCcc33AY.410.000882
ORF3a253S253StcCtcT33AY.410.000882
ORF3a253S253StcCtcT33AY.450.000365
ORF3a253S253StcCtcT23AY.46.50.000397
ORF3a253S253StcCtcA13AY.46.50.000198
ORF3a253S253StcCtcT33AY.560.004815
ORF3a253S253StcCtcT23AY.590.001059
ORF3a253S253StcCtcA13AY.590.00053
ORF3a253S253FtCctTc33AY.730.001996
ORF3a253S253ATccGcc33AY.850.001282
ORF3a253S253FtCctTc33AY.9.20.00011
ORF3a253S253ATccGcc33B.10.000027
ORF3a253S253CtCctGc33B.10.000027
ORF3a253S253FtCctTc33B.1.10.000054
ORF3a253S253StcCtcT33B.1.1.10.00098
ORF3a253S253StcCtcA23B.1.1.250.001137
ORF3a253S253StcCtcT13B.1.1.250.000569
ORF3a253S253StcCtcT33B.1.1.2630.004673
ORF3a253S253CtCctGc33B.1.1.3180.000905
ORF3a253S253PTccCcc33B.1.1.3720.002066
ORF3a253S253PTccCcc33B.1.1.4090.008499
ORF3a253S253FtCctTc33B.1.1.700.001023
ORF3a253S253StcCtcA33B.1.1100.013575
ORF3a253S253StcCtcA33B.1.177.420.002683
ORF3a253S253StcCtcT33B.1.177.600.000655
ORF3a253S253FtCctTc33B.1.20.000026
ORF3a253S253StcCtcT33B.1.3370.01676
ORF3a253S253StcCtcT23B.1.3490.00143
ORF3a253S253StcCtcA13B.1.3490.000715
ORF3a253S253FtCctTc33B.1.3500.008798
ORF3a253S253StcCtcT33B.1.5880.00273
ORF3a253S253PTccCcc33B.1.5960.000261
ORF3a253S253StcCtcA23B.1.617.10.000258
ORF3a253S253StcCtcT13B.1.617.10.000129
ORF3a253S253PTccCcc33B.1.6230.001609
ORF3a253S253StcCtcT33C.36.30.001702
ORF3a253S253del1TcCGc-220.111111
ORF3a253S253ITCcATc22All0
ORF3a253S253XtCCtAA22All0
ORF3a253S253FtCctTc22AY.1000.000092
ORF3a253S253StcCtcT22AY.1010.000981
ORF3a253S253StcCtcT22AY.1150.010417
ORF3a253S253StcCtcT22AY.1160.000574
ORF3a253S253PTccCcc22AY.140.000176
ORF3a253S253StcCtcT22AY.16.10.00094
ORF3a253S253ATccGcc22AY.250.000012
ORF3a253S253FtCctTc22AY.250.000012
ORF3a253S253ATccGcc22AY.260.000057
ORF3a253S253StcCtcT22AY.29.10.000441
ORF3a253S253CtCctGc22AY.30.00002
ORF3a253S253StcCtcA22AY.300.000791
ORF3a253S253StcCtcT22AY.320.001065
ORF3a253S253ATccGcc22AY.330.000134
ORF3a253S253StcCtcT22AY.340.000194
ORF3a253S253StcCtcT22AY.370.000632
ORF3a253S253FtCctTc22AY.390.000049
ORF3a253S253delTCC---22AY.40.000003
ORF3a253S253PTccCcc22AY.420.00008
ORF3a253S253FtCctTc22AY.46.20.001271
ORF3a253S253PTccCcc22AY.5.40.000553
ORF3a253S253StcCtcT22AY.540.000191
ORF3a253S253StcCtcT22AY.580.001815
ORF3a253S253ATccGcc22AY.60.000082
ORF3a253S253PTccCcc22AY.610.00021
ORF3a253S253StcCtcA22AY.620.000871
ORF3a253S253StcCtcT22AY.670.000929
ORF3a253S253StcCtcT22AY.690.000373
ORF3a253S253StcCtcT22AY.710.00095
ORF3a253S253StcCtcT22AY.740.000231
ORF3a253S253PTccCcc22AY.740.000231
ORF3a253S253delTCC---22AY.750.000112
ORF3a253S253PTccCcc22AY.75.10.000361
ORF3a253S253StcCtcT22AY.870.001665
ORF3a253S253StcCtcT22AY.920.000575
ORF3a253S253PTccCcc22AY.98.10.000097
ORF3a253S253PTccCcc22B0.000256
ORF3a253S253StcCtcT22B.1.1.2040.006079
ORF3a253S253StcCtcT22B.1.1.2050.007435
ORF3a253S253StcCtcT22B.1.1.2140.000111
ORF3a253S253PTccCcc22B.1.1.2200.003717
ORF3a253S253PTccCcc22B.1.1.3120.003824
ORF3a253S253StcCtcT22B.1.1.370.000386
ORF3a253S253StcCtcT22B.1.1.4340.000697
ORF3a253S253StcCtcT22B.1.1.4480.004065
ORF3a253S253StcCtcT22B.1.1.5180.012658
ORF3a253S253PTccCcc22B.1.1.5190.000079
ORF3a253S253TTccAcc22B.1.1.70.000002
ORF3a253S253PTccCcc22B.1.1600.000062
ORF3a253S253StcCtcT22B.1.160.260.004843
ORF3a253S253StcCtcT22B.1.177.570.000562
ORF3a253S253PTccCcc22B.1.177.70.00033
ORF3a253S253StcCtcT22B.1.177.750.002081
ORF3a253S253StcCtcT22B.1.177.870.001456
ORF3a253S253CtCctGc22B.1.20.000018
ORF3a253S253PTccCcc22B.1.2580.000133
ORF3a253S253PTccCcc22B.1.258.60.039216
ORF3a253S253PTccCcc22B.1.3110.000549
ORF3a253S253PTccCcc22B.1.351.50.001199
ORF3a253S253StcCtcT22B.1.36.290.001035
ORF3a253S253StcCtcT22B.1.36.80.002
ORF3a253S253StcCtcA22B.1.3960.001411
ORF3a253S253StcCtcT22B.1.4700.002809
ORF3a253S253StcCtcT22B.1.5250.000226
ORF3a253S253PTccCcc22B.1.5330.019231
ORF3a253S253StcCtcT22B.1.5750.000607
ORF3a253S253StcCtcT22B.1.5950.000522
ORF3a253S253FtCctTc22B.1.617.20.000008
ORF3a253S253delTCC---22B.1.617.20.000008
ORF3a253S253StcCtcT22C.37.10.005236
ORF3a253S253PTccCcc22C.37.10.005236
ORF3a253S253FtCctTc12D.20.000075
ORF3a253S253FtCCtTT12D.20.000075
ORF3a253S253FtCctTc22L.30.007092
ORF3a253S253HTCcCAc22P.10.000032
ORF3a253S253StcCtcT22P.20.000373
ORF3a253S253StcCtcT22P.40.007605
ORF3a253S253StcCtcT22W.30.010526
ORF3a253S253StcCtcA11A.20.000662
ORF3a253S253FtCctTc11A.2.20.001689
ORF3a253S253StcCtcG11A.2.50.000499
ORF3a253S253StcCtcT11A.23.10.000704
ORF3a253S253StcCtcT11A.30.002096
ORF3a253S253RTCCCGT11All0
ORF3a253S253ETCCGAA11All0
ORF3a253S253NTCcAAc11All0
ORF3a253S253PTccCcc11AY.1010.00049
ORF3a253S253TTccAcc11AY.1020.000027
ORF3a253S253PTccCcc11AY.1020.000027
ORF3a253S253YtCctAc11AY.1030.000006
ORF3a253S253StcCtcT11AY.1040.001984
ORF3a253S253StcCtcT11AY.1050.000643
ORF3a253S253StcCtcT11AY.1070.000466
ORF3a253S253StcCtcT11AY.1100.000113
ORF3a253S253ATccGcc11AY.1130.000142
ORF3a253S253PTccCcc11AY.1150.005208
ORF3a253S253PTccCcc11AY.1160.000287
ORF3a253S253PTccCcc11AY.1170.000085
ORF3a253S253PTccCcc11AY.1190.000035
ORF3a253S253StcCtcT11AY.120.000316
ORF3a253S253PTccCcc11AY.1200.000037
ORF3a253S253YtCctAc11AY.1200.000037
ORF3a253S253FtCctTc11AY.1200.000037
ORF3a253S253StcCtcT11AY.120.10.000321
ORF3a253S253PTccCcc11AY.120.10.000321
ORF3a253S253ATccGcc11AY.200.000039
ORF3a253S253FtCctTc11AY.23.10.000417
ORF3a253S253StcCtcT11AY.23.10.000417
ORF3a253S253PTccCcc11AY.23.10.000417
ORF3a253S253PTccCcc11AY.280.00189
ORF3a253S253PTccCcc11AY.290.000016
ORF3a253S253LTCcCTc11AY.30.00001
ORF3a253S253PTccCcc11AY.3.10.000085
ORF3a253S253PTccCcc11AY.320.000532
ORF3a253S253StcCtcT11AY.34.10.00051
ORF3a253S253PTccCcc11AY.360.000148
ORF3a253S253PTccCcc11AY.380.000499
ORF3a253S253StcCtcT11AY.380.000499
ORF3a253S253YtCctAc11AY.390.000025
ORF3a253S253ATccGcc11AY.390.000025
ORF3a253S253TTccAcc11AY.390.000025
ORF3a253S253PTccCcc11AY.39.10.00004
ORF3a253S253ATccGcc11AY.39.10.00004
ORF3a253S253ATccGcc11AY.40.000002
ORF3a253S253CtCctGc11AY.40.000002
ORF3a253S253RTCCCGT11AY.430.000004
ORF3a253S253PTccCcc11AY.460.000104
ORF3a253S253PTccCcc11AY.470.000031
ORF3a253S253ATccGcc11AY.50.000021
ORF3a253S253StcCtcA11AY.5.30.000337
ORF3a253S253PTccCcc11AY.5.30.000337
ORF3a253S253StcCtcT11AY.5.40.000277
ORF3a253S253StcCtcA11AY.530.000288
ORF3a253S253StcCtcT11AY.570.000656
ORF3a253S253PTccCcc11AY.620.000436
ORF3a253S253StcCtcT11AY.650.000533
ORF3a253S253FtCctTc11AY.670.000464
ORF3a253S253delTCC---11AY.670.000464
ORF3a253S253PTccCcc11AY.680.000274
ORF3a253S253delTCC---11AY.680.000274
ORF3a253S253StcCtcA11AY.7.10.000113
ORF3a253S253StcCtcT11AY.730.000665
ORF3a253S253FtCctTc11AY.740.000116
ORF3a253S253StcCtcT11AY.80.000606
ORF3a253S253PTccCcc11AY.830.001724
ORF3a253S253StcCtcT11AY.840.000437
ORF3a253S253ATccGcc11AY.90.000068
ORF3a253S253PTccCcc11AY.9.10.000084
ORF3a253S253StcCtcT11AY.970.001701
ORF3a253S253FtCctTc11AY.980.000079
ORF3a253S253delTCC---11AY.980.000079
ORF3a253S253delTCC---11AY.98.10.000048
ORF3a253S253FtCctTc11AY.98.10.000048
ORF3a253S253StcCtcT11AY.98.10.000048
ORF3a253S253PTccCcc11AY.990.001049
ORF3a253S253StcCtcT11AY.990.001049
ORF3a253S253del1tCct-c11B0.000128
ORF3a253S253XtCCtAA11B.10.000009
ORF3a253S253TTccAcc11B.10.000009
ORF3a253S253YtCctAc11B.1.10.000018
ORF3a253S253CtCctGc11B.1.10.000018
ORF3a253S253StcCtcT11B.1.1.100.001115
ORF3a253S253ATccGcc11B.1.1.100.001115
ORF3a253S253PTccCcc11B.1.1.1210.002427
ORF3a253S253StcCtcT11B.1.1.1290.009174
ORF3a253S253StcCtcT11B.1.1.1350.004695
ORF3a253S253StcCtcT11B.1.1.1410.002012
ORF3a253S253StcCtcA11B.1.1.1530.001095
ORF3a253S253FtCctTc11B.1.1.1760.000439
ORF3a253S253StcCtcT11B.1.1.1890.001513
ORF3a253S253PTccCcc11B.1.1.1980.001468
ORF3a253S253StcCtcT11B.1.1.2070.001182
ORF3a253S253StcCtcT11B.1.1.2160.00089
ORF3a253S253StcCtcT11B.1.1.2200.001859
ORF3a253S253FtCctTc11B.1.1.2210.010101
ORF3a253S253PTccCcc11B.1.1.2360.006897
ORF3a253S253StcCtcT11B.1.1.2530.002506
ORF3a253S253PTccCcc11B.1.1.2650.003155
ORF3a253S253PTccCcc11B.1.1.2690.001353
ORF3a253S253StcCtcT11B.1.1.2730.006757
ORF3a253S253StcCtcT11B.1.1.280.000311
ORF3a253S253StcCtcT11B.1.1.2840.000107
ORF3a253S253ATccGcc11B.1.1.2840.000107
ORF3a253S253PTccCcc11B.1.1.2850.006536
ORF3a253S253ATccGcc11B.1.1.3060.000438
ORF3a253S253StcCtcA11B.1.1.3120.001912
ORF3a253S253StcCtcG11B.1.1.3180.000302
ORF3a253S253PTccCcc11B.1.1.330.000421
ORF3a253S253StcCtcT11B.1.1.3440.010753
ORF3a253S253PTccCcc11B.1.1.370.000193
ORF3a253S253FtCctTc11B.1.1.370.000193
ORF3a253S253StcCtcT11B.1.1.3810.04
ORF3a253S253StcCtcT11B.1.1.390.00051
ORF3a253S253PTccCcc11B.1.1.3970.002252
ORF3a253S253StcCtcT11B.1.1.3980.003226
ORF3a253S253PTccCcc11B.1.1.4070.041667
ORF3a253S253StcCtcT11B.1.1.4210.030303
ORF3a253S253PTccCcc11B.1.1.4320.001266
ORF3a253S253StcCtcT11B.1.1.4620.008621
ORF3a253S253StcCtcT11B.1.1.4850.016667
ORF3a253S253PTccCcc11B.1.1.540.003021
ORF3a253S253LtCCtTG11B.1.1.70.000001
ORF3a253S253PTccCcc11B.1.1.80.003584
ORF3a253S253StcCtcT11B.1.110.30.000718
ORF3a253S253StcCtcT11B.1.1280.000635
ORF3a253S253StcCtcT11B.1.1390.000733
ORF3a253S253ATccGcc11B.1.1470.000756
ORF3a253S253ATccGcc11B.1.1600.000031
ORF3a253S253PTccCcc11B.1.1700.00431
ORF3a253S253ATccGcc11B.1.1770.000013
ORF3a253S253delTCC---11B.1.1770.000013
ORF3a253S253StcCtcT11B.1.177.120.000152
ORF3a253S253PTccCcc11B.1.177.170.000821
ORF3a253S253StcCtcT11B.1.177.210.000076
ORF3a253S253PTccCcc11B.1.177.230.003236
ORF3a253S253StcCtcT11B.1.177.440.000519
ORF3a253S253StcCtcT11B.1.177.540.000606
ORF3a253S253StcCtcA11B.1.177.560.000668
ORF3a253S253FtCctTc11B.1.177.570.000281
ORF3a253S253StcCtcT11B.1.177.580.001332
ORF3a253S253StcCtcT11B.1.177.60.000977
ORF3a253S253ITCcATc11B.1.177.70.000165
ORF3a253S253StcCtcT11B.1.177.70.000165
ORF3a253S253StcCtcT11B.1.177.730.000566
ORF3a253S253StcCtcT11B.1.177.860.000183
ORF3a253S253PTccCcc11B.1.1790.003759
ORF3a253S253delTCC---11B.1.20.000009
ORF3a253S253PTccCcc11B.1.2060.000816
ORF3a253S253PTccCcc11B.1.2140.003663
ORF3a253S253PTccCcc11B.1.214.20.0006
ORF3a253S253YtCctAc11B.1.2430.00007
ORF3a253S253PTccCcc11B.1.2430.00007
ORF3a253S253StcCtcT11B.1.2580.000067
ORF3a253S253PTccCcc11B.1.258.110.000396
ORF3a253S253StcCtcT11B.1.258.70.001912
ORF3a253S253StcCtcT11B.1.3150.006061
ORF3a253S253StcCtcT11B.1.351.20.000303
ORF3a253S253StcCtcT11B.1.36.180.00042
ORF3a253S253StcCtcG11B.1.36.90.003215
ORF3a253S253PTccCcc11B.1.3690.000285
ORF3a253S253PTccCcc11B.1.3750.00082
ORF3a253S253StcCtcT11B.1.3880.090909
ORF3a253S253PTccCcc11B.1.4000.000429
ORF3a253S253StcCtcT11B.1.4080.00369
ORF3a253S253PTccCcc11B.1.4150.014286
ORF3a253S253StcCtcT11B.1.4160.001269
ORF3a253S253StcCtcT11B.1.4240.008065
ORF3a253S253ATccGcc11B.1.4290.000024
ORF3a253S253StcCtcA11B.1.429.10.012048
ORF3a253S253StcCtcT11B.1.4500.011364
ORF3a253S253FtCctTc11B.1.4590.004082
ORF3a253S253PTccCcc11B.1.4970.000315
ORF3a253S253XtCCtAA11B.1.4970.000315
ORF3a253S253delTCC---11B.1.4970.000315
ORF3a253S253NTCcAAc11B.1.4970.000315
ORF3a253S253StcCtcA11B.1.5030.002488
ORF3a253S253PTccCcc11B.1.5250.000113
ORF3a253S253ATccGcc11B.1.5380.008065
ORF3a253S253StcCtcT11B.1.5490.007194
ORF3a253S253FtCctTc11B.1.5600.00463
ORF3a253S253PTccCcc11B.1.5610.000397
ORF3a253S253PTccCcc11B.1.5750.000303
ORF3a253S253YtCctAc11B.1.5760.000907
ORF3a253S253StcCtcT11B.1.5760.000907
ORF3a253S253StcCtcT11B.1.5770.000687
ORF3a253S253StcCtcT11B.1.5800.004065
ORF3a253S253PTccCcc11B.1.5880.00091
ORF3a253S253ATccGcc11B.1.5960.000087
ORF3a253S253YtCctAc11B.1.5960.000087
ORF3a253S253StcCtcT11B.1.5980.016949
ORF3a253S253StcCtcT11B.1.6090.000479
ORF3a253S253StcCtcT11B.1.6100.003546
ORF3a253S253FtCctTc11B.1.617.10.000129
ORF3a253S253PTccCcc11B.1.617.10.000129
ORF3a253S253StcCtcT11B.1.621.10.000506
ORF3a253S253YtCctAc11B.1.6270.00202
ORF3a253S253PTccCcc11B.1.6360.006711
ORF3a253S253PTccCcc11B.1.9.40.006135
ORF3a253S253PTccCcc11B.1.910.002075
ORF3a253S253StcCtcT11B.30.000831
ORF3a253S253PTccCcc11B.4.50.011905
ORF3a253S253FtCctTc11B.400.000364
ORF3a253S253StcCtcT11B.60.00091
ORF3a253S253StcCtcT11C.1.20.004255
ORF3a253S253StcCtcT11C.2.10.006667
ORF3a253S253PTccCcc11C.230.005814
ORF3a253S253StcCtcT11C.290.0625
ORF3a253S253PTccCcc11C.350.000774
ORF3a253S253StcCtcT11C.350.000774
ORF3a253S253StcCtcT11N.90.005952
ORF3a253S253ETCCGAA11P.10.000016
ORF3a253S253del1Tcc-cc11P.1.10.10.00813
ORF3a253S253LTCcCTc11P.1.170.000162
ORF3a253S253ITCcATc11P.20.000187
ORF3a253S253StcCtcA11P.30.001595
ORF3a253S253PTccCcc11P.40.003802
ORF3a253S253PTccCcc11P.70.004367
ORF3a253S253StcCtcT11Q.40.000455
ORF3a253S253TTccAcc11R.10.00009
ORF3a253S253delTCC---11R.10.00009
ORF3a253S253StcCtcA11U.30.003861