CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 25 & Codon = ccC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a25P25PsynccTccC144013580.94305625465-25467

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a25P25PccTccC13581440All0.00026
ORF3a25P25PccTccC11541154B.1.4270.058274
ORF3a25P25PccTccC3746AY.40.000058
ORF3a25P25PccTccC1043B.1.1.70.000009
ORF3a25P25PccTccC2829B.10.000256
ORF3a25P25PccTccC2427B.1.617.20.00009
ORF3a25P25PccTccC2121AY.1190.000741
ORF3a25P25PccTccC1919B.1.4290.000447
ORF3a25P25PccTccC1212AY.440.000073
ORF3a25P25PccTccC16AY.4.50.000107
ORF3a25P25PccTccC26B.1.20.000018
ORF3a25P25PccTccC66B.1.5960.000523
ORF3a25P25PccTccC56P.10.000079
ORF3a25P25PccTccC35AY.30.00003
ORF3a25P25PccTccC55AY.430.000022
ORF3a25P25PccTccC24AY.1030.000012
ORF3a25P25PccTccC44AY.330.000267
ORF3a25P25PccTccC13AY.250.000006
ORF3a25P25PccTccC33B.1.2580.0002
ORF3a25P25PccTccC12B.1.10.000018
ORF3a25P25PccTccC12B.1.1770.000013
ORF3a25P25PccTccC22B.1.2210.000142
ORF3a25P25PccTccC22B.1.3110.000549
ORF3a25P25PccTccC11AY.260.000028
ORF3a25P25PccTccC11AY.290.000016
ORF3a25P25PccTccC11AY.3.10.000085
ORF3a25P25PccTccC11AY.450.000122
ORF3a25P25PccTccC11AY.46.30.000934
ORF3a25P25PccTccC11AY.530.000288
ORF3a25P25PccTccC11AY.9.10.000084
ORF3a25P25PccTccC11B.1.1.1390.022727
ORF3a25P25PccTccC11B.1.1.2200.001859
ORF3a25P25PccTccC11B.1.1.3060.000438
ORF3a25P25PccTccC11B.1.1.5190.00004
ORF3a25P25PccTccC11B.1.351.30.000876
ORF3a25P25PccTccC11B.1.3750.00082
ORF3a25P25PccTccC11B.1.5950.000261
ORF3a25P25PccTccC11C.370.000116