CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 25

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a25P25LnonsyncCtcTt415141420.99783225465-25467
ORF3a25P25LnonsynCCTTTA415130.00072271725465-25467
ORF3a25P25LnonsyncCTcTA415130.00072271725465-25467
ORF3a25P25LnonsyncCTcTC415130.00072271725465-25467
ORF3a25P25SnonsynCctTct243524340.99958925465-25467
ORF3a25P25SnonsynCcTTcC243510.00041067825465-25467
ORF3a25P25deldelCCT---17181718125465-25467
ORF3a25P25PsynccTccC144013580.94305625465-25467
ORF3a25P25PsynccTccA1440410.028472225465-25467
ORF3a25P25PsynccTccG1440410.028472225465-25467
ORF3a25P25HnonsyncCtcAt3943930.99746225465-25467
ORF3a25P25HnonsyncCTcAC39410.0025380725465-25467
ORF3a25P25TnonsynCctAct9999125465-25467
ORF3a25P25del1delccTcc-1290.7525465-25467
ORF3a25P25del1delCct-ct1230.2525465-25467
ORF3a25P25RnonsyncCtcGt1080.825465-25467
ORF3a25P25RnonsyncCTcGA1020.225465-25467
ORF3a25P25FnonsynCCtTTt99125465-25467
ORF3a25P25AnonsynCctGct55125465-25467
ORF3a25P25GnonsynCCtGGt22125465-25467
ORF3a25P25CnonsynCCtTGt22125465-25467
ORF3a25P25XnonsynCCTTGA22125465-25467
ORF3a25P25del2delcCTc--11125465-25467

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a25P25LcCtcTt41424151All0.000792
ORF3a25P25LcCTcTA34151All0.000001
ORF3a25P25LcCTcTC34151All0.000001
ORF3a25P25LCCTTTA34151All0.000001
ORF3a25P25SCctTct24342435All0.000466
ORF3a25P25SCcTTcC12435All0
ORF3a25P25LcCtcTt18951895AY.40.002949
ORF3a25P25delCCT---17181718All0.000329
ORF3a25P25PccTccC13581440All0.00026
ORF3a25P25PccTccA411440All0.000008
ORF3a25P25PccTccG411440All0.000008
ORF3a25P25delCCT---12711271B.1.214.20.76199
ORF3a25P25PccTccC11541154B.1.4270.058274
ORF3a25P25LcCtcTt541541AY.250.003254
ORF3a25P25HcCtcAt393394All0.000075
ORF3a25P25HcCTcAC1394All0
ORF3a25P25SCctTct389389AY.3.10.033166
ORF3a25P25SCctTct292292B.1.6310.983165
ORF3a25P25HcCtcAt215215AY.200.008356
ORF3a25P25LcCtcTt198198B.1.1.70.000177
ORF3a25P25SCctTct173173AY.40.000269
ORF3a25P25LcCtcTt158158B.1.617.20.000595
ORF3a25P25SCctTct143143AY.1170.012086
ORF3a25P25SCctTct140140AY.440.000852
ORF3a25P25LcCtcTt123123AY.1030.000764
ORF3a25P25LcCtcTt117117AY.430.000518
ORF3a25P25SCctTct117117AY.690.021841
ORF3a25P25SCctTct117117B.1.617.20.000441
ORF3a25P25SCctTct106106AY.200.00412
ORF3a25P25delCCT---104104B.1.617.30.310448
ORF3a25P25TCctAct9999All0.000019
ORF3a25P25LcCtcTt9595AY.440.000578
ORF3a25P25SCctTct7777AY.1030.000478
ORF3a25P25SCctTct6666AY.30.000656
ORF3a25P25SCctTct6464B.1.1.2980.055172
ORF3a25P25LcCtcTt6363B.1.4950.572727
ORF3a25P25LcCtcTt6262AY.1200.002305
ORF3a25P25LcCtcTt5656AY.30.000557
ORF3a25P25SCctTct4848AY.250.000289
ORF3a25P25PccTccC3746AY.40.000058
ORF3a25P25PccTccA646AY.40.000009
ORF3a25P25PccTccG346AY.40.000005
ORF3a25P25SCctTct4545AY.430.000199
ORF3a25P25PccTccG2043B.1.1.70.000018
ORF3a25P25PccTccA1343B.1.1.70.000012
ORF3a25P25PccTccC1043B.1.1.70.000009
ORF3a25P25SCctTct4242AY.1190.001483
ORF3a25P25SCctTct4242B.1.1.70.000038
ORF3a25P25TCctAct4141B.1.1.70.000037
ORF3a25P25LcCtcTt4141B.1.177.80.03085
ORF3a25P25SCctTct4040AY.50.000826
ORF3a25P25delCCT---3939B.1.1.70.000035
ORF3a25P25LcCtcTt3535AY.46.60.002527
ORF3a25P25LcCtcTt3535B.10.000321
ORF3a25P25LcCtcTt3434AY.1130.004841
ORF3a25P25SCctTct3434AY.1130.004841
ORF3a25P25HcCtcAt3232B.1.36.230.52459
ORF3a25P25LcCtcTt3131AY.290.000489
ORF3a25P25TCctAct3030AY.1180.001879
ORF3a25P25delCCT---3030AY.40.000047
ORF3a25P25SCctTct3030AY.90.002028
ORF3a25P25PccTccC2829B.10.000256
ORF3a25P25PccTccA129B.10.000009
ORF3a25P25LcCtcTt2828AY.50.000578
ORF3a25P25SCctTct2828B.1.20.000247
ORF3a25P25LcCtcTt2727AY.1100.003043
ORF3a25P25delCCT---2727AY.1190.000953
ORF3a25P25SCctTct2727B.1.5170.011529
ORF3a25P25PccTccC2427B.1.617.20.00009
ORF3a25P25PccTccA227B.1.617.20.000008
ORF3a25P25PccTccG127B.1.617.20.000004
ORF3a25P25SCctTct2626B.1.5260.000611
ORF3a25P25LcCtcTt2525P.1.140.001195
ORF3a25P25SCctTct2424B.1.3510.000713
ORF3a25P25delCCT---2323B.1.10.000417
ORF3a25P25LcCtcTt2222AY.260.000623
ORF3a25P25LcCtcTt2222AY.330.001469
ORF3a25P25LcCtcTt2022B.1.4270.00101
ORF3a25P25LcCTcTC222B.1.4270.000101
ORF3a25P25PccTccC2121AY.1190.000741
ORF3a25P25LcCtcTt2121AY.200.000816
ORF3a25P25SCctTct2121AY.230.001465
ORF3a25P25HcCtcAt2020AY.1200.000744
ORF3a25P25LcCtcTt2020AY.390.000494
ORF3a25P25delCCT---2020B.10.000183
ORF3a25P25LcCtcTt1920B.1.1.5190.000755
ORF3a25P25LcCTcTC120B.1.1.5190.00004
ORF3a25P25LcCtcTt1919AY.4.20.000412
ORF3a25P25HcCtcAt1919B.1.1.70.000017
ORF3a25P25HcCtcAt1919B.1.2400.004096
ORF3a25P25PccTccC1919B.1.4290.000447
ORF3a25P25SCctTct1818AY.220.037657
ORF3a25P25SCctTct1818B.10.000165
ORF3a25P25HcCtcAt1717B.1.20.00015
ORF3a25P25LcCtcTt1616AY.1020.000424
ORF3a25P25delCCT---1616AY.250.000096
ORF3a25P25SCctTct1616AY.260.000453
ORF3a25P25LcCtcTt1616AY.750.000896
ORF3a25P25LcCtcTt1515AY.1050.009646
ORF3a25P25delCCT---1515AY.290.000237
ORF3a25P25SCctTct1515AY.350.003496
ORF3a25P25LcCtcTt1515AY.670.006964
ORF3a25P25SCctTct1515P.10.000236
ORF3a25P25LcCtcTt1414AY.60.000576
ORF3a25P25LcCtcTt1414B.1.20.000123
ORF3a25P25HcCtcAt1414P.10.000221
ORF3a25P25SCctTct1313AY.540.00124
ORF3a25P25LcCtcTt1313AY.550.011927
ORF3a25P25delCCT---1313B.1.1770.000171
ORF3a25P25HcCtcAt1313B.1.617.20.000049
ORF3a25P25del1ccTcc-912All0.000002
ORF3a25P25del1Cct-ct312All0.000001
ORF3a25P25LcCtcTt1212AY.1000.000552
ORF3a25P25SCctTct1212AY.290.000189
ORF3a25P25LcCtcTt1212AY.39.10.000475
ORF3a25P25PccTccC1212AY.440.000073
ORF3a25P25LcCtcTt1212AY.7.10.001352
ORF3a25P25SCctTct1212B.1.3690.003423
ORF3a25P25LcCtcTt1212P.10.000189
ORF3a25P25LcCtcTt1111AD.20.002409
ORF3a25P25LcCtcTt1111AY.1110.002015
ORF3a25P25RcCtcGt810All0.000002
ORF3a25P25RcCTcGA210All0
ORF3a25P25SCctTct1010AY.1200.000372
ORF3a25P25SCctTct1010AY.390.000247
ORF3a25P25HcCtcAt1010AY.40.000016
ORF3a25P25delCCT---1010AY.440.000061
ORF3a25P25LcCtcTt1010B.1.5960.000871
ORF3a25P25FCCtTTt99All0.000002
ORF3a25P25delCCT---99AY.1030.000056
ORF3a25P25LcCtcTt99AY.420.000362
ORF3a25P25LcCtcTt99AY.740.001041
ORF3a25P25SCctTct99B.1.1.3330.009688
ORF3a25P25delCCT---99B.1.2100.01919
ORF3a25P25delCCT---99B.1.6390.195652
ORF3a25P25LcCtcTt88AY.450.000973
ORF3a25P25LcCtcTt88B.1.6210.000708
ORF3a25P25LcCtcTt88R.10.00072
ORF3a25P25SCctTct77AY.1000.000322
ORF3a25P25SCctTct77AY.1020.000186
ORF3a25P25HcCtcAt77AY.250.000042
ORF3a25P25delCCT---77AY.46.20.004447
ORF3a25P25LcCtcTt77AY.470.000218
ORF3a25P25SCctTct77AY.99.20.000645
ORF3a25P25delCCT---77B.1.214.10.14
ORF3a25P25SCctTct77B.1.3110.001922
ORF3a25P25HcCtcAt77B.1.617.10.000903
ORF3a25P25SCctTct77Q.30.001015
ORF3a25P25LcCTcTA260.111111
ORF3a25P25LcCtcTt260.111111
ORF3a25P25LCCTTTA260.111111
ORF3a25P25LcCtcTt66AY.3.10.000512
ORF3a25P25LcCtcTt66AY.4.50.000645
ORF3a25P25PccTccA46AY.4.50.00043
ORF3a25P25PccTccC16AY.4.50.000107
ORF3a25P25PccTccG16AY.4.50.000107
ORF3a25P25SCctTct66AY.420.000241
ORF3a25P25delCCT---66AY.430.000027
ORF3a25P25SCctTct66AY.460.000624
ORF3a25P25SCctTct66AY.9.20.00022
ORF3a25P25PccTccA46B.1.20.000035
ORF3a25P25PccTccC26B.1.20.000018
ORF3a25P25PccTccC66B.1.5960.000523
ORF3a25P25PccTccC56P.10.000079
ORF3a25P25PccTccG16P.10.000016
ORF3a25P25ACctGct55All0.000001
ORF3a25P25LcCtcTt55AY.1180.000313
ORF3a25P25delCCT---55AY.260.000142
ORF3a25P25PccTccC35AY.30.00003
ORF3a25P25PccTccA25AY.30.00002
ORF3a25P25SCctTct55AY.39.10.000198
ORF3a25P25PccTccC55AY.430.000022
ORF3a25P25TCctAct55AY.430.000022
ORF3a25P25LcCtcTt55AY.46.40.000823
ORF3a25P25LcCtcTt55AY.540.000477
ORF3a25P25SCctTct55AY.750.00028
ORF3a25P25SCctTct55AY.840.002187
ORF3a25P25SCctTct55B.1.10.000091
ORF3a25P25delCCT---55B.1.214.30.035714
ORF3a25P25LcCtcTt55B.1.2210.000355
ORF3a25P25LcCtcTt55B.1.5260.000118
ORF3a25P25LcCtcTt55B.1.617.10.000645
ORF3a25P25delCCT---55B.1.617.20.000019
ORF3a25P25RcCTcGA240.111111
ORF3a25P25RcCtcGt240.111111
ORF3a25P25PccTccG24AY.1030.000012
ORF3a25P25PccTccC24AY.1030.000012
ORF3a25P25LcCtcTt44AY.1140.000924
ORF3a25P25PccTccC44AY.330.000267
ORF3a25P25TCctAct44AY.40.000006
ORF3a25P25delCCT---44AY.4.50.00043
ORF3a25P25SCctTct44AY.450.000487
ORF3a25P25SCctTct44AY.470.000124
ORF3a25P25delCCT---44AY.490.01278
ORF3a25P25SCctTct44AY.820.005427
ORF3a25P25LcCtcTt44B.1.10.000073
ORF3a25P25SCctTct44B.1.1.330.001684
ORF3a25P25del1ccTcc-44B.1.1.70.000004
ORF3a25P25SCctTct44B.1.1600.000125
ORF3a25P25delCCT---44B.1.2140.014652
ORF3a25P25delCCT---44B.1.2180.020619
ORF3a25P25PccTccG44B.1.221.30.003333
ORF3a25P25LcCtcTt44B.1.2740.047619
ORF3a25P25LcCtcTt44B.450.015326
ORF3a25P25ACctGct33AY.1030.000019
ORF3a25P25LcCtcTt33AY.1190.000106
ORF3a25P25SCctTct33AY.120.000948
ORF3a25P25delCCT---33AY.230.000209
ORF3a25P25PccTccG23AY.250.000012
ORF3a25P25PccTccC13AY.250.000006
ORF3a25P25LcCtcTt33AY.270.000194
ORF3a25P25delCCT---33AY.30.00003
ORF3a25P25LcCtcTt33AY.300.001187
ORF3a25P25delCCT---33AY.330.0002
ORF3a25P25LcCtcTt33AY.360.000445
ORF3a25P25SCctTct33AY.4.2.10.000447
ORF3a25P25SCctTct33AY.4.50.000322
ORF3a25P25HcCtcAt33AY.440.000018
ORF3a25P25LcCtcTt33AY.5.40.00083
ORF3a25P25LcCtcTt33AY.7.20.001678
ORF3a25P25SCctTct33AY.740.000347
ORF3a25P25LcCtcTt33AY.90.000203
ORF3a25P25LcCtcTt33AY.9.10.000251
ORF3a25P25LcCtcTt33AY.9.20.00011
ORF3a25P25LcCtcTt33AY.920.000862
ORF3a25P25SCctTct33AY.98.10.000145
ORF3a25P25LcCtcTt33B.1.1.2750.033708
ORF3a25P25LcCtcTt33B.1.1.3050.011583
ORF3a25P25SCctTct33B.1.1770.00004
ORF3a25P25delCCT---33B.1.177.320.004049
ORF3a25P25PccTccC33B.1.2580.0002
ORF3a25P25LcCtcTt33B.1.4290.000071
ORF3a25P25del1Cct-ct33B.1.5250.000339
ORF3a25P25LcCtcTt33B.1.5820.001472
ORF3a25P25delCCT---33B.1.6090.001438
ORF3a25P25delCCT---33Q.10.000379
ORF3a25P25delCCT---33U.30.011583
ORF3a25P25CCCtTGt220.111111
ORF3a25P25FCCtTTt220.111111
ORF3a25P25XCCTTGA220.111111
ORF3a25P25GCCtGGt22All0
ORF3a25P25XCCTTGA22All0
ORF3a25P25CCCtTGt22All0
ORF3a25P25LcCtcTt22AY.1010.000981
ORF3a25P25delCCT---22AY.1020.000053
ORF3a25P25LcCtcTt22AY.1060.00067
ORF3a25P25SCctTct22AY.1100.000225
ORF3a25P25TCctAct22AY.1190.000071
ORF3a25P25LcCtcTt22AY.120.000632
ORF3a25P25LcCtcTt22AY.1210.000271
ORF3a25P25LcCtcTt22AY.130.000322
ORF3a25P25LcCtcTt22AY.160.000759
ORF3a25P25LcCtcTt22AY.20.000712
ORF3a25P25LcCtcTt22AY.230.000139
ORF3a25P25TCctAct22AY.290.000032
ORF3a25P25FCCtTTt22AY.30.00002
ORF3a25P25LcCtcTt22AY.320.001065
ORF3a25P25SCctTct22AY.400.001929
ORF3a25P25TCctAct22AY.440.000012
ORF3a25P25LcCtcTt22AY.460.000208
ORF3a25P25LcCtcTt22AY.46.20.001271
ORF3a25P25SCcTTcC12AY.46.20.000635
ORF3a25P25SCctTct12AY.46.20.000635
ORF3a25P25SCctTct22AY.46.60.000144
ORF3a25P25delCCT---22AY.50.000041
ORF3a25P25LcCtcTt22AY.520.001629
ORF3a25P25delCCT---22AY.540.000191
ORF3a25P25PccTccA22AY.580.001815
ORF3a25P25SCctTct22AY.60.000082
ORF3a25P25LcCtcTt22AY.610.00021
ORF3a25P25SCctTct22AY.610.00021
ORF3a25P25delCCT---22AY.70.000392
ORF3a25P25SCctTct22AY.760.009662
ORF3a25P25delCCT---22AY.790.002421
ORF3a25P25SCctTct22AY.790.002421
ORF3a25P25delCCT---22AY.810.003984
ORF3a25P25TCctAct22AY.850.000854
ORF3a25P25PccTccA22AY.90.000135
ORF3a25P25LcCtcTt22AY.910.001461
ORF3a25P25SCctTct22AY.930.000546
ORF3a25P25LcCtcTt22AY.980.000158
ORF3a25P25LcCtcTt22AY.98.10.000097
ORF3a25P25LcCtcTt22AY.99.20.000184
ORF3a25P25del1ccTcc-22AY.99.20.000184
ORF3a25P25GCCtGGt22B0.000256
ORF3a25P25TCctAct22B.10.000018
ORF3a25P25PccTccA12B.1.10.000018
ORF3a25P25PccTccC12B.1.10.000018
ORF3a25P25SCctTct22B.1.1.2070.002364
ORF3a25P25SCctTct22B.1.1.2840.000215
ORF3a25P25LcCtcTt22B.1.1.3620.011236
ORF3a25P25LcCtcTt22B.1.1.700.000682
ORF3a25P25LcCtcTt22B.1.1770.000026
ORF3a25P25PccTccA12B.1.1770.000013
ORF3a25P25PccTccC12B.1.1770.000013
ORF3a25P25LcCtcTt22B.1.177.40.000422
ORF3a25P25LcCtcTt22B.1.177.750.002081
ORF3a25P25LcCtcTt22B.1.177.810.000379
ORF3a25P25PccTccC22B.1.2210.000142
ORF3a25P25SCctTct22B.1.2340.000264
ORF3a25P25LcCtcTt22B.1.2580.000133
ORF3a25P25PccTccC22B.1.3110.000549
ORF3a25P25LcCtcTt22B.1.3510.000059
ORF3a25P25LcCtcTt22B.1.5170.000854
ORF3a25P25TCctAct22B.1.617.20.000008
ORF3a25P25LcCtcTt22B.1.621.10.001012
ORF3a25P25SCctTct22B.1.6280.000705
ORF3a25P25SCctTct22C.370.000232
ORF3a25P25LcCtcTt22D.20.00015
ORF3a25P25SCctTct22P.1.140.000096
ORF3a25P25SCctTct22P.20.000373
ORF3a25P25SCctTct22Q.10.000253
ORF3a25P25delCCT---11A.23.10.000704
ORF3a25P25del2cCTc--11All0
ORF3a25P25LcCtcTt11AT.10.005128
ORF3a25P25LcCtcTt11AY.10.000396
ORF3a25P25LcCtcTt11AY.100.00053
ORF3a25P25SCctTct11AY.100.00053
ORF3a25P25HcCtcAt11AY.1030.000006
ORF3a25P25SCctTct11AY.1040.001984
ORF3a25P25LcCtcTt11AY.1070.000466
ORF3a25P25LcCtcTt11AY.1090.00074
ORF3a25P25SCctTct11AY.1110.000183
ORF3a25P25delCCT---11AY.1110.000183
ORF3a25P25TCctAct11AY.1160.000287
ORF3a25P25PccTccG11AY.1160.000287
ORF3a25P25TCctAct11AY.1200.000037
ORF3a25P25PccTccG11AY.1200.000037
ORF3a25P25delCCT---11AY.1200.000037
ORF3a25P25SCctTct11AY.120.10.000321
ORF3a25P25LcCtcTt11AY.120.10.000321
ORF3a25P25SCctTct11AY.1210.000135
ORF3a25P25SCctTct11AY.140.000088
ORF3a25P25SCctTct11AY.160.00038
ORF3a25P25SCctTct11AY.16.10.00047
ORF3a25P25delCCT---11AY.190.00114
ORF3a25P25SCctTct11AY.190.00114
ORF3a25P25SCctTct11AY.20.000356
ORF3a25P25SCctTct11AY.210.001898
ORF3a25P25LcCtcTt11AY.240.000431
ORF3a25P25HcCtcAt11AY.260.000028
ORF3a25P25PccTccC11AY.260.000028
ORF3a25P25PccTccC11AY.290.000016
ORF3a25P25RcCtcGt11AY.290.000016
ORF3a25P25TCctAct11AY.29.10.000221
ORF3a25P25LcCtcTt11AY.29.10.000221
ORF3a25P25RcCtcGt11AY.30.00001
ORF3a25P25del1ccTcc-11AY.30.00001
ORF3a25P25PccTccC11AY.3.10.000085
ORF3a25P25TCctAct11AY.3.10.000085
ORF3a25P25HcCtcAt11AY.3.10.000085
ORF3a25P25LcCtcTt11AY.340.000097
ORF3a25P25SCctTct11AY.34.10.00051
ORF3a25P25LcCtcTt11AY.34.10.00051
ORF3a25P25SCctTct11AY.360.000148
ORF3a25P25SCctTct11AY.380.000499
ORF3a25P25LcCtcTt11AY.380.000499
ORF3a25P25PccTccA11AY.390.000025
ORF3a25P25delCCT---11AY.390.000025
ORF3a25P25delCCT---11AY.39.10.00004
ORF3a25P25RcCtcGt11AY.40.000002
ORF3a25P25del2cCTc--11AY.40.000002
ORF3a25P25FCCtTTt11AY.40.000002
ORF3a25P25SCctTct11AY.4.40.000409
ORF3a25P25LcCtcTt11AY.410.000294
ORF3a25P25FCCtTTt11AY.420.00004
ORF3a25P25del1ccTcc-11AY.430.000004
ORF3a25P25FCCtTTt11AY.430.000004
ORF3a25P25ACctGct11AY.430.000004
ORF3a25P25PccTccC11AY.450.000122
ORF3a25P25SCctTct11AY.46.10.001027
ORF3a25P25PccTccC11AY.46.30.000934
ORF3a25P25LcCtcTt11AY.46.50.000198
ORF3a25P25delCCT---11AY.470.000031
ORF3a25P25SCctTct11AY.5.30.000337
ORF3a25P25SCctTct11AY.520.000814
ORF3a25P25SCctTct11AY.530.000288
ORF3a25P25PccTccC11AY.530.000288
ORF3a25P25LcCtcTt11AY.560.001605
ORF3a25P25SCctTct11AY.590.00053
ORF3a25P25delCCT---11AY.60.000041
ORF3a25P25HcCtcAt11AY.60.000041
ORF3a25P25LcCtcTt11AY.640.000595
ORF3a25P25LcCtcTt11AY.650.000533
ORF3a25P25SCctTct11AY.670.000464
ORF3a25P25delCCT---11AY.680.000274
ORF3a25P25SCctTct11AY.680.000274
ORF3a25P25LcCtcTt11AY.680.000274
ORF3a25P25SCctTct11AY.70.000196
ORF3a25P25SCctTct11AY.7.10.000113
ORF3a25P25LcCtcTt11AY.710.000475
ORF3a25P25LcCtcTt11AY.75.10.00018
ORF3a25P25SCctTct11AY.75.10.00018
ORF3a25P25PccTccA11AY.80.000606
ORF3a25P25LcCTcTA11AY.820.001357
ORF3a25P25SCctTct11AY.880.000884
ORF3a25P25PccTccC11AY.9.10.000084
ORF3a25P25delCCT---11AY.9.20.000037
ORF3a25P25HcCtcAt11AY.910.00073
ORF3a25P25SCctTct11AY.920.000287
ORF3a25P25SCctTct11AY.950.000761
ORF3a25P25LcCtcTt11AY.950.000761
ORF3a25P25SCctTct11AY.980.000079
ORF3a25P25HcCtcAt11AY.980.000079
ORF3a25P25delCCT---11AY.990.001049
ORF3a25P25SCctTct11AY.990.001049
ORF3a25P25LcCtcTt11B0.000128
ORF3a25P25del1ccTcc-11B.10.000009
ORF3a25P25RcCtcGt11B.10.000009
ORF3a25P25SCctTct11B.1.1.10.000327
ORF3a25P25SCctTct11B.1.1.1180.010204
ORF3a25P25PccTccC11B.1.1.1390.022727
ORF3a25P25LcCtcTt11B.1.1.1760.000439
ORF3a25P25SCctTct11B.1.1.1920.002309
ORF3a25P25delCCT---11B.1.1.2160.00089
ORF3a25P25PccTccC11B.1.1.2200.001859
ORF3a25P25LcCtcTt11B.1.1.2690.001353
ORF3a25P25SCctTct11B.1.1.280.000311
ORF3a25P25LcCtcTt11B.1.1.2970.002237
ORF3a25P25PccTccC11B.1.1.3060.000438
ORF3a25P25delCCT---11B.1.1.3110.000358
ORF3a25P25LcCtcTt11B.1.1.3180.000302
ORF3a25P25SCctTct11B.1.1.3180.000302
ORF3a25P25LcCtcTt11B.1.1.330.000421
ORF3a25P25LcCtcTt11B.1.1.3920.052632
ORF3a25P25delCCT---11B.1.1.4090.002833
ORF3a25P25HcCtcAt11B.1.1.4160.000905
ORF3a25P25HcCtcAt11B.1.1.4330.001425
ORF3a25P25delCCT---11B.1.1.4340.000349
ORF3a25P25HcCtcAt11B.1.1.5190.00004
ORF3a25P25PccTccC11B.1.1.5190.00004
ORF3a25P25delCCT---11B.1.1.5280.004808
ORF3a25P25LcCtcTt11B.1.1.610.008772
ORF3a25P25LcCtcTt11B.1.1.750.010638
ORF3a25P25LcCtcTt11B.1.1100.004525
ORF3a25P25delCCT---11B.1.1600.000031
ORF3a25P25LcCtcTt11B.1.1600.000031
ORF3a25P25HcCtcAt11B.1.160.170.001701
ORF3a25P25delCCT---11B.1.160.330.004425
ORF3a25P25RcCtcGt11B.1.1770.000013
ORF3a25P25delCCT---11B.1.177.110.001698
ORF3a25P25delCCT---11B.1.177.190.001431
ORF3a25P25delCCT---11B.1.177.210.000076
ORF3a25P25delCCT---11B.1.177.40.000211
ORF3a25P25SCctTct11B.1.177.40.000211
ORF3a25P25delCCT---11B.1.177.60.000977
ORF3a25P25PccTccG11B.1.177.720.00339
ORF3a25P25delCCT---11B.1.1790.003759
ORF3a25P25TCctAct11B.1.20.000009
ORF3a25P25RcCtcGt11B.1.20.000009
ORF3a25P25ACctGct11B.1.20.000009
ORF3a25P25SCctTct11B.1.214.40.009091
ORF3a25P25delCCT---11B.1.221.10.002907
ORF3a25P25SCctTct11B.1.2400.000216
ORF3a25P25SCctTct11B.1.2430.00007
ORF3a25P25delCCT---11B.1.2580.000067
ORF3a25P25SCctTct11B.1.2580.000067
ORF3a25P25SCctTct11B.1.258.30.001675
ORF3a25P25LcCtcTt11B.1.3060.005714
ORF3a25P25PccTccC11B.1.351.30.000876
ORF3a25P25HcCtcAt11B.1.351.50.0006
ORF3a25P25LcCtcTt11B.1.360.000146
ORF3a25P25LcCtcTt11B.1.36.170.000494
ORF3a25P25delCCT---11B.1.36.170.000494
ORF3a25P25delCCT---11B.1.36.180.00042
ORF3a25P25HcCtcAt11B.1.36.290.000517
ORF3a25P25LcCtcTt11B.1.36.290.000517
ORF3a25P25LcCtcTt11B.1.36.80.001
ORF3a25P25PccTccC11B.1.3750.00082
ORF3a25P25LcCtcTt11B.1.3750.00082
ORF3a25P25delCCT---11B.1.3890.001002
ORF3a25P25HcCtcAt11B.1.3960.000706
ORF3a25P25delCCT---11B.1.4090.000781
ORF3a25P25LcCtcTt11B.1.4090.000781
ORF3a25P25SCctTct11B.1.4260.001009
ORF3a25P25delCCT---11B.1.4270.00005
ORF3a25P25HcCtcAt11B.1.4270.00005
ORF3a25P25HcCtcAt11B.1.4290.000024
ORF3a25P25delCCT---11B.1.4590.004082
ORF3a25P25SCctTct11B.1.4620.007246
ORF3a25P25HcCtcAt11B.1.466.20.000391
ORF3a25P25LcCtcTt11B.1.466.20.000391
ORF3a25P25SCctTct11B.1.466.20.000391
ORF3a25P25LcCtcTt11B.1.4680.005714
ORF3a25P25PccTccG11B.1.4990.00105
ORF3a25P25SCctTct11B.1.5090.000866
ORF3a25P25PccTccA11B.1.5250.000113
ORF3a25P25PccTccG11B.1.5260.000024
ORF3a25P25LCCTTTA11B.1.5770.000687
ORF3a25P25FCCtTTt11B.1.5770.000687
ORF3a25P25PccTccC11B.1.5950.000261
ORF3a25P25LcCtcTt11B.1.595.10.005848
ORF3a25P25TCctAct11B.1.5960.000087
ORF3a25P25PccTccG11B.1.617.10.000129
ORF3a25P25SCctTct11B.1.617.10.000129
ORF3a25P25delCCT---11B.1.6190.000871
ORF3a25P25LcCtcTt11B.1.6200.000946
ORF3a25P25SCctTct11B.1.6210.000089
ORF3a25P25HcCtcAt11B.1.6230.000536
ORF3a25P25SCctTct11B.1.6270.00202
ORF3a25P25delCCT---11B.1.6380.052632
ORF3a25P25delCCT---11B.550.00295
ORF3a25P25delCCT---11C.160.00106
ORF3a25P25LcCtcTt11C.370.000116
ORF3a25P25PccTccC11C.370.000116
ORF3a25P25delCCT---11D.20.000075
ORF3a25P25SCctTct11N.60.007092
ORF3a25P25delCCT---11P.10.000016
ORF3a25P25TCctAct11P.10.000016
ORF3a25P25delCCT---11P.1.150.000232
ORF3a25P25SCctTct11P.1.150.000232
ORF3a25P25PccTccG11P.1.60.001946
ORF3a25P25SCctTct11P.1.70.000319
ORF3a25P25FCCtTTt11P.20.000187
ORF3a25P25HcCTcAC11P.20.000187
ORF3a25P25LcCtcTt11P.20.000187
ORF3a25P25LcCtcTt11Q.30.000145