CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 249 & Codon = Ctc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a249I249LnonsynAtcCtc12411241126137-26139

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a249I249LAtcCtc12411241All0.000237
ORF3a249I249LAtcCtc918918AY.40.001429
ORF3a249I249LAtcCtc6363B.1.617.20.000237
ORF3a249I249LAtcCtc4545AY.50.000929
ORF3a249I249LAtcCtc2626AY.60.001069
ORF3a249I249LAtcCtc2323AY.90.001555
ORF3a249I249LAtcCtc2020AY.4.20.000434
ORF3a249I249LAtcCtc1717AY.1200.000632
ORF3a249I249LAtcCtc1717AY.430.000075
ORF3a249I249LAtcCtc1616AY.980.001264
ORF3a249I249LAtcCtc1515B.1.1.70.000013
ORF3a249I249LAtcCtc1010AY.1110.001832
ORF3a249I249LAtcCtc99AY.70.001764
ORF3a249I249LAtcCtc99B.1.5250.001018
ORF3a249I249LAtcCtc77AY.4.50.000752
ORF3a249I249LAtcCtc44AY.4.10.00295
ORF3a249I249LAtcCtc44AY.900.002738
ORF3a249I249LAtcCtc33AY.440.000018
ORF3a249I249LAtcCtc33AY.46.50.000595
ORF3a249I249LAtcCtc33AY.580.002722
ORF3a249I249LAtcCtc33AY.610.000314
ORF3a249I249LAtcCtc22AY.100.00106
ORF3a249I249LAtcCtc22AY.4.2.10.000298
ORF3a249I249LAtcCtc22AY.80.001212
ORF3a249I249LAtcCtc22AY.9.20.000073
ORF3a249I249LAtcCtc22B.10.000018
ORF3a249I249LAtcCtc11AY.1000.000046
ORF3a249I249LAtcCtc11AY.1020.000027
ORF3a249I249LAtcCtc11AY.170.008197
ORF3a249I249LAtcCtc11AY.30.00001
ORF3a249I249LAtcCtc11AY.350.000233
ORF3a249I249LAtcCtc11AY.420.00004
ORF3a249I249LAtcCtc11AY.450.000122
ORF3a249I249LAtcCtc11AY.46.60.000072
ORF3a249I249LAtcCtc11AY.5.40.000277
ORF3a249I249LAtcCtc11AY.690.000187
ORF3a249I249LAtcCtc11B.1.1.440.00241
ORF3a249I249LAtcCtc11B.1.1770.000013
ORF3a249I249LAtcCtc11B.1.2580.000067
ORF3a249I249LAtcCtc11B.1.258.60.019608
ORF3a249I249LAtcCtc11B.1.3960.000706
ORF3a249I249LAtcCtc11B.1.6360.006711