CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 210

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a210D210AnonsyngAcgCc11965119590.99949926020-26022
ORF3a210D210AnonsyngACgCT1196560.00050146326020-26022
ORF3a210D210DsyngaCgaT77207720126020-26022
ORF3a210D210YnonsynGacTac176717510.99094526020-26022
ORF3a210D210YnonsynGaCTaT1767160.009054926020-26022
ORF3a210D210NnonsynGacAac370370126020-26022
ORF3a210D210GnonsyngAcgGc3483470.99712626020-26022
ORF3a210D210GnonsyngACgGA34810.0028735626020-26022
ORF3a210D210EnonsyngaCgaA1781260.70786526020-26022
ORF3a210D210EnonsyngaCgaG178520.29213526020-26022
ORF3a210D210deldelGAC---2929126020-26022
ORF3a210D210VnonsyngAcgTc2424126020-26022
ORF3a210D210HnonsynGacCac44126020-26022
ORF3a210D210LnonsynGAcCTc33126020-26022
ORF3a210D210InonsynGAcATc22126020-26022
ORF3a210D210RnonsynGACCGA11126020-26022
ORF3a210D210QnonsynGaCCaG11126020-26022

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a210D210AgAcgCc1195911965All0.002287
ORF3a210D210AgACgCT611965All0.000001
ORF3a210D210AgAcgCc1123211238AY.30.111718
ORF3a210D210AgACgCT611238AY.30.00006
ORF3a210D210DgaCgaT77207720All0.001477
ORF3a210D210DgaCgaT26522652AY.40.004128
ORF3a210D210YGacTac17511767All0.000335
ORF3a210D210YGaCTaT161767All0.000003
ORF3a210D210DgaCgaT13311331B.1.1.70.001192
ORF3a210D210YGacTac606621B.1.1.70.000543
ORF3a210D210YGaCTaT15621B.1.1.70.000013
ORF3a210D210DgaCgaT517517B.1.1.2880.990421
ORF3a210D210NGacAac370370All0.000071
ORF3a210D210GgAcgGc347348All0.000066
ORF3a210D210GgACgGA1348All0
ORF3a210D210DgaCgaT313313AY.250.001883
ORF3a210D210DgaCgaT223223B.1.617.20.00084
ORF3a210D210DgaCgaT210210B.1.1770.002765
ORF3a210D210AgAcgCc195195B.1.617.20.000734
ORF3a210D210EgaCgaA126178All0.000024
ORF3a210D210EgaCgaG52178All0.00001
ORF3a210D210DgaCgaT165165AY.440.001004
ORF3a210D210GgAcgGc142142B.1.6090.068073
ORF3a210D210DgaCgaT136136B.1.20.001198
ORF3a210D210YGacTac134134AY.30.001333
ORF3a210D210YGacTac126126AY.40.000196
ORF3a210D210DgaCgaT124124P.10.001953
ORF3a210D210NGacAac116116B.1.1.70.000104
ORF3a210D210DgaCgaT114114AY.430.000505
ORF3a210D210YGacTac106106B.1.177.810.020068
ORF3a210D210DgaCgaT9797AY.30.000965
ORF3a210D210DgaCgaT9696AY.1030.000596
ORF3a210D210DgaCgaT9090B.1.5960.007842
ORF3a210D210YGacTac8888B.1.6210.00779
ORF3a210D210DgaCgaT8080B.10.000733
ORF3a210D210DgaCgaT7373AY.1190.002578
ORF3a210D210DgaCgaT7070B.1.258.170.007278
ORF3a210D210YGacTac6565B.1.177.530.155502
ORF3a210D210DgaCgaT6262B.1.5690.898551
ORF3a210D210GgAcgGc5959B.1.1.70.000053
ORF3a210D210AgAcgCc5959B.1.20.00052
ORF3a210D210YGacTac5555AY.250.000331
ORF3a210D210DgaCgaT5454B.1.1.3160.049954
ORF3a210D210AgAcgCc5151AY.250.000307
ORF3a210D210YGacTac5151AY.4.2.10.007598
ORF3a210D210DgaCgaT5151AY.920.014651
ORF3a210D210YGacTac4747B.1.617.20.000177
ORF3a210D210AgAcgCc4646AY.1170.003888
ORF3a210D210EgaCgaA4343AY.4.40.017594
ORF3a210D210NGacAac4141AY.440.00025
ORF3a210D210AgAcgCc3939AY.920.011204
ORF3a210D210AgAcgCc3838AY.1190.001342
ORF3a210D210YGacTac3737B.1.4930.948718
ORF3a210D210DgaCgaT3737C.370.004294
ORF3a210D210DgaCgaT3636AY.50.000743
ORF3a210D210DgaCgaT3535AY.390.000865
ORF3a210D210AgAcgCc3535AY.440.000213
ORF3a210D210DgaCgaT3535B.1.10.000635
ORF3a210D210NGacAac3434AY.40.000053
ORF3a210D210YGacTac3434AY.440.000207
ORF3a210D210DgaCgaT3434B.1.4090.026562
ORF3a210D210AgAcgCc3030AY.840.013123
ORF3a210D210DgaCgaT3030B.1.3510.000892
ORF3a210D210delGAC---2929All0.000006
ORF3a210D210DgaCgaT2929AY.230.002023
ORF3a210D210DgaCgaT2828AY.1000.001288
ORF3a210D210DgaCgaT2828B.1.1600.000873
ORF3a210D210DgaCgaT2727AY.60.00111
ORF3a210D210GgAcgGc2626B.1.1.3720.017906
ORF3a210D210DgaCgaT2626B.1.2210.001847
ORF3a210D210DgaCgaT2525AY.260.000708
ORF3a210D210YGacTac2525B.1.20.00022
ORF3a210D210VgAcgTc2424All0.000005
ORF3a210D210DgaCgaT2424AY.470.000747
ORF3a210D210YGacTac2424B.1.1770.000316
ORF3a210D210NGacAac2323AY.980.001817
ORF3a210D210NGacAac2222AY.1030.000137
ORF3a210D210DgaCgaT2020AY.460.002082
ORF3a210D210DgaCgaT2020B.1.1.2140.001109
ORF3a210D210DgaCgaT2020B.1.4270.00101
ORF3a210D210DgaCgaT2020B.1.5650.016207
ORF3a210D210DgaCgaT1919AY.200.000738
ORF3a210D210YGacTac1919B.10.000174
ORF3a210D210DgaCgaT1818AY.1180.001128
ORF3a210D210DgaCgaT1818AY.290.000284
ORF3a210D210DgaCgaT1818AY.90.001217
ORF3a210D210DgaCgaT1818C.360.016393
ORF3a210D210YGacTac1818N.90.107143
ORF3a210D210YGacTac1617AY.430.000071
ORF3a210D210YGaCTaT117AY.430.000004
ORF3a210D210AgAcgCc1717AY.450.002069
ORF3a210D210DgaCgaT1717AY.610.001781
ORF3a210D210GgAcgGc1717B.10.000156
ORF3a210D210DgaCgaT1717B.1.1.5250.092896
ORF3a210D210YGacTac1616AY.1020.000424
ORF3a210D210EgaCgaA1416AY.140.001232
ORF3a210D210EgaCgaG216AY.140.000176
ORF3a210D210AgAcgCc1616B.10.000147
ORF3a210D210DgaCgaT1616B.1.1.390.008155
ORF3a210D210GgAcgGc1616C.350.012384
ORF3a210D210DgaCgaT1616P.20.002986
ORF3a210D210YGacTac1515AY.1000.00069
ORF3a210D210YGacTac1515AY.230.001046
ORF3a210D210AgAcgCc1515AY.50.00031
ORF3a210D210DgaCgaT1515B.1.258.120.11811
ORF3a210D210YGacTac1515Q.80.002474
ORF3a210D210DgaCgaT1414AY.1060.004689
ORF3a210D210YGacTac1414AY.1210.001894
ORF3a210D210AgAcgCc1414AY.40.000022
ORF3a210D210YGacTac1414C.360.01275
ORF3a210D210NGacAac1313AY.30.000129
ORF3a210D210NGacAac1313AY.50.000268
ORF3a210D210AgAcgCc1212AY.1030.000075
ORF3a210D210VgAcgTc1212AY.30.000119
ORF3a210D210DgaCgaT1212AY.420.000483
ORF3a210D210DgaCgaT1212AY.46.60.000866
ORF3a210D210EgaCgaA1112B.1.1.70.00001
ORF3a210D210EgaCgaG112B.1.1.70.000001
ORF3a210D210DgaCgaT1111AY.1020.000292
ORF3a210D210AgAcgCc1111AY.430.000049
ORF3a210D210DgaCgaT1111AY.750.000616
ORF3a210D210DgaCgaT1111AY.9.10.000921
ORF3a210D210DgaCgaT1111B.1.2580.000732
ORF3a210D210AgAcgCc1010AY.5.30.003374
ORF3a210D210DgaCgaT1010B.1.1.1890.015129
ORF3a210D210YGacTac1010B.1.1.5190.000397
ORF3a210D210YGacTac1010B.1.177.750.010406
ORF3a210D210DgaCgaT1010B.1.2100.021322
ORF3a210D210DgaCgaT1010B.1.360.001459
ORF3a210D210NGacAac1010B.1.4040.013021
ORF3a210D210AgAcgCc99AY.1180.000564
ORF3a210D210DgaCgaT99AY.4.20.000195
ORF3a210D210DgaCgaT99AY.450.001095
ORF3a210D210YGacTac99AY.50.000186
ORF3a210D210YGacTac99AY.9.10.000754
ORF3a210D210DgaCgaT99B.1.1.2220.001836
ORF3a210D210DgaCgaT99B.1.110.30.006466
ORF3a210D210NGacAac99B.1.4290.000212
ORF3a210D210EgaCgaG99B.1.5170.003843
ORF3a210D210DgaCgaT99B.1.5260.000212
ORF3a210D210NGacAac99P.10.000142
ORF3a210D210DgaCgaT99P.1.10.002859
ORF3a210D210YGacTac88AY.1030.00005
ORF3a210D210EgaCgaA88AY.1030.00005
ORF3a210D210DgaCgaT88AY.1200.000297
ORF3a210D210DgaCgaT88AY.320.00426
ORF3a210D210DgaCgaT88AY.330.000534
ORF3a210D210AgAcgCc88AY.390.000198
ORF3a210D210EgaCgaA68AY.430.000027
ORF3a210D210EgaCgaG28AY.430.000009
ORF3a210D210YGacTac88AY.450.000973
ORF3a210D210AgAcgCc88AY.460.000833
ORF3a210D210GgAcgGc88AY.470.000249
ORF3a210D210DgaCgaT88AY.690.001493
ORF3a210D210DgaCgaT88B.1.1.260.041885
ORF3a210D210DgaCgaT88B.1.160.80.010309
ORF3a210D210NGacAac88B.1.617.20.00003
ORF3a210D210GgAcgGc88P.10.000126
ORF3a210D210DgaCgaT88Q.10.001011
ORF3a210D210AgAcgCc77AY.1050.004502
ORF3a210D210DgaCgaT77AY.1210.000947
ORF3a210D210AgAcgCc77AY.230.000488
ORF3a210D210DgaCgaT77AY.3.10.000597
ORF3a210D210DgaCgaT77AY.46.30.006536
ORF3a210D210DgaCgaT77AY.75.10.001262
ORF3a210D210DgaCgaT77B.1.1.3030.019337
ORF3a210D210EgaCgaA77B.1.20.000062
ORF3a210D210DgaCgaT77B.1.2430.000487
ORF3a210D210NGacAac77B.1.258.170.000728
ORF3a210D210EgaCgaG77B.1.3710.007856
ORF3a210D210DgaCgaT77P.1.140.000335
ORF3a210D210AgAcgCc66AY.1140.001387
ORF3a210D210GgAcgGc66AY.250.000036
ORF3a210D210DgaCgaT66AY.270.000388
ORF3a210D210DgaCgaT66AY.340.000582
ORF3a210D210DgaCgaT66AY.980.000474
ORF3a210D210DgaCgaT66B0.000767
ORF3a210D210EgaCgaG56B.1.1600.000156
ORF3a210D210EgaCgaA16B.1.1600.000031
ORF3a210D210DgaCgaT66B.1.177.120.00091
ORF3a210D210DgaCgaT66B.1.177.180.006961
ORF3a210D210EgaCgaG66B.1.2430.000418
ORF3a210D210YGacTac66B.1.2580.000399
ORF3a210D210DgaCgaT66B.1.5250.000679
ORF3a210D210EgaCgaA56B.1.617.20.000019
ORF3a210D210EgaCgaG16B.1.617.20.000004
ORF3a210D210DgaCgaT66P.1.150.001394
ORF3a210D210YGacTac66P.1.70.001916
ORF3a210D210AgAcgCc55AY.1020.000133
ORF3a210D210DgaCgaT55AY.1160.001434
ORF3a210D210AgAcgCc55AY.1160.001434
ORF3a210D210YGacTac55AY.290.000079
ORF3a210D210DgaCgaT55AY.540.000477
ORF3a210D210DgaCgaT55AY.650.002665
ORF3a210D210DgaCgaT55AY.9.20.000184
ORF3a210D210DgaCgaT55AY.98.10.000242
ORF3a210D210DgaCgaT55AY.99.20.000461
ORF3a210D210EgaCgaG45B.10.000037
ORF3a210D210EgaCgaA15B.10.000009
ORF3a210D210DgaCgaT55B.1.1.280.001556
ORF3a210D210YGacTac55B.1.1.370.000964
ORF3a210D210DgaCgaT55B.1.3960.003529
ORF3a210D210DgaCgaT55B.1.4290.000118
ORF3a210D210DgaCgaT55B.1.5950.001305
ORF3a210D210GgAcgGc55B.1.5960.000436
ORF3a210D210DgaCgaT55C.36.30.002836
ORF3a210D210delGAC---440.222222
ORF3a210D210HGacCac44All0.000001
ORF3a210D210DgaCgaT44AY.1010.001962
ORF3a210D210YGacTac44AY.1070.001864
ORF3a210D210EgaCgaA44AY.130.000644
ORF3a210D210GgAcgGc44AY.290.000063
ORF3a210D210GgAcgGc44AY.40.000006
ORF3a210D210GgAcgGc44AY.4.20.000087
ORF3a210D210YGacTac44AY.4.50.00043
ORF3a210D210NGacAac44AY.410.001176
ORF3a210D210AgAcgCc44AY.420.000161
ORF3a210D210delGAC---44AY.430.000018
ORF3a210D210EgaCgaG34AY.440.000018
ORF3a210D210EgaCgaA14AY.440.000006
ORF3a210D210YGacTac44AY.740.000463
ORF3a210D210DgaCgaT44AY.930.001092
ORF3a210D210NGacAac44B.10.000037
ORF3a210D210NGacAac44B.1.10.000073
ORF3a210D210AgAcgCc44B.1.10.000073
ORF3a210D210GgAcgGc34B.1.10.000054
ORF3a210D210GgACgGA14B.1.10.000018
ORF3a210D210DgaCgaT44B.1.1.2340.048193
ORF3a210D210DgaCgaT44B.1.1.3290.015385
ORF3a210D210NGacAac44B.1.1.5190.000159
ORF3a210D210delGAC---44B.1.1.70.000004
ORF3a210D210DgaCgaT44B.1.177.750.004162
ORF3a210D210DgaCgaT44B.1.177.810.000757
ORF3a210D210NGacAac44B.1.20.000035
ORF3a210D210YGacTac44B.1.2430.000278
ORF3a210D210DgaCgaT44B.1.438.10.000429
ORF3a210D210delGAC---44B.1.5250.000453
ORF3a210D210DgaCgaT44B.1.5770.002749
ORF3a210D210DgaCgaT44B.1.617.10.000516
ORF3a210D210DgaCgaT44B.1.6210.000354
ORF3a210D210GgAcgGc44P.1.140.000191
ORF3a210D210YGacTac44P.20.000747
ORF3a210D210AgAcgCc33AD.20.000657
ORF3a210D210LGAcCTc33All0.000001
ORF3a210D210DgaCgaT33AY.100.00159
ORF3a210D210AgAcgCc33AY.1130.000427
ORF3a210D210DgaCgaT33AY.130.000483
ORF3a210D210DgaCgaT33AY.160.001139
ORF3a210D210DgaCgaT33AY.16.10.00141
ORF3a210D210AgAcgCc33AY.240.001293
ORF3a210D210AgAcgCc33AY.3.10.000256
ORF3a210D210YGacTac33AY.390.000074
ORF3a210D210YGacTac33AY.4.20.000065
ORF3a210D210DgaCgaT33AY.4.50.000322
ORF3a210D210YGacTac33AY.420.000121
ORF3a210D210NGacAac33AY.430.000013
ORF3a210D210GgAcgGc33AY.430.000013
ORF3a210D210AgAcgCc33AY.470.000093
ORF3a210D210AgAcgCc33AY.550.002752
ORF3a210D210YGacTac33AY.610.000314
ORF3a210D210YGacTac33AY.75.10.000541
ORF3a210D210DgaCgaT33AY.850.001282
ORF3a210D210AgAcgCc33AY.910.002191
ORF3a210D210AgAcgCc33AY.930.000819
ORF3a210D210DgaCgaT33B.1.1.1150.026786
ORF3a210D210NGacAac33B.1.1.3060.001315
ORF3a210D210YGacTac33B.1.1.390.001529
ORF3a210D210YGacTac33B.1.1.5060.111111
ORF3a210D210DgaCgaT33B.1.1.5190.000119
ORF3a210D210YGacTac33B.1.1460.012712
ORF3a210D210DgaCgaT33B.1.177.440.001557
ORF3a210D210DgaCgaT33B.1.177.600.000655
ORF3a210D210DgaCgaT33B.1.177.80.002257
ORF3a210D210DgaCgaT33B.1.2060.002447
ORF3a210D210NGacAac33B.1.2580.0002
ORF3a210D210DgaCgaT33B.1.258.140.002941
ORF3a210D210DgaCgaT33B.1.36.180.001261
ORF3a210D210DgaCgaT33B.1.3690.000856
ORF3a210D210YGacTac33B.1.4270.000151
ORF3a210D210DgaCgaT33B.1.466.20.001174
ORF3a210D210DgaCgaT33B.1.5090.002597
ORF3a210D210DgaCgaT33B.1.5710.029126
ORF3a210D210DgaCgaT33B.1.5750.00091
ORF3a210D210GgAcgGc33B.1.617.20.000011
ORF3a210D210EgaCgaG33B.1.621.10.001517
ORF3a210D210NGacAac33B.1.6230.001609
ORF3a210D210YGacTac33C.370.000348
ORF3a210D210EgaCgaG33C.370.000348
ORF3a210D210DgaCgaT33D.20.000225
ORF3a210D210VgAcgTc33N.40.012766
ORF3a210D210YGacTac33P.10.000047
ORF3a210D210DgaCgaT33R.10.00027
ORF3a210D210YGacTac33Z.10.008671
ORF3a210D210DgaCgaT220.111111
ORF3a210D210DgaCgaT22A.290.010638
ORF3a210D210IGAcATc22All0
ORF3a210D210GgAcgGc22AY.1000.000092
ORF3a210D210AgAcgCc22AY.1000.000092
ORF3a210D210EgaCgaA22AY.1020.000053
ORF3a210D210GgAcgGc22AY.1020.000053
ORF3a210D210AgAcgCc22AY.1060.00067
ORF3a210D210DgaCgaT22AY.1170.000169
ORF3a210D210YGacTac22AY.1170.000169
ORF3a210D210YGacTac22AY.120.20.002571
ORF3a210D210YGacTac22AY.200.000078
ORF3a210D210EgaCgaA12AY.200.000039
ORF3a210D210EgaCgaG12AY.200.000039
ORF3a210D210YGacTac22AY.240.000862
ORF3a210D210EgaCgaA22AY.250.000012
ORF3a210D210NGacAac22AY.260.000057
ORF3a210D210YGacTac22AY.260.000057
ORF3a210D210EgaCgaA12AY.290.000016
ORF3a210D210EgaCgaG12AY.290.000016
ORF3a210D210AgAcgCc22AY.380.000999
ORF3a210D210EgaCgaA22AY.40.000003
ORF3a210D210AgAcgCc22AY.410.000588
ORF3a210D210AgAcgCc22AY.46.10.002053
ORF3a210D210AgAcgCc22AY.590.001059
ORF3a210D210NGacAac22AY.620.000871
ORF3a210D210AgAcgCc22AY.680.000547
ORF3a210D210EgaCgaA22AY.7.10.000225
ORF3a210D210DgaCgaT22AY.710.00095
ORF3a210D210DgaCgaT22AY.730.001331
ORF3a210D210AgAcgCc22AY.880.001768
ORF3a210D210NGacAac22AY.9.20.000073
ORF3a210D210YGacTac22AY.9.20.000073
ORF3a210D210AgAcgCc22AY.9.20.000073
ORF3a210D210DgaCgaT22B.1.1.250.001137
ORF3a210D210DgaCgaT22B.1.1.2770.001517
ORF3a210D210YGacTac22B.1.1.280.000622
ORF3a210D210YGacTac22B.1.1.2940.002532
ORF3a210D210GgAcgGc22B.1.1.3150.016949
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