CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 209 & Codon = tcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a209S209SsyntcAtcT6511580.24270426017-26019

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a209S209StcAtcT158651All0.00003
ORF3a209S209StcAtcT12150B.1.1.70.000011
ORF3a209S209StcAtcT2642AY.40.00004
ORF3a209S209StcAtcT2435B.1.617.20.00009
ORF3a209S209StcAtcT321AY.250.000018
ORF3a209S209StcAtcT414AY.430.000018
ORF3a209S209StcAtcT1012AY.440.000061
ORF3a209S209StcAtcT111B.1.3510.00003
ORF3a209S209StcAtcT510B.1.20.000044
ORF3a209S209StcAtcT77B.1.110.30.005029
ORF3a209S209StcAtcT66AY.200.000233
ORF3a209S209StcAtcT15AY.1020.000027
ORF3a209S209StcAtcT15AY.50.000021
ORF3a209S209StcAtcT55AY.600.00469
ORF3a209S209StcAtcT44A0.001548
ORF3a209S209StcAtcT24AY.390.000049
ORF3a209S209StcAtcT24B.10.000018
ORF3a209S209StcAtcT44B.1.1.280.001245
ORF3a209S209StcAtcT44B.1.177.570.001124
ORF3a209S209StcAtcT13AY.30.00001
ORF3a209S209StcAtcT13B.1.10.000018
ORF3a209S209StcAtcT33B.1.1.2160.002671
ORF3a209S209StcAtcT33B.1.1.2770.002276
ORF3a209S209StcAtcT13B.1.4290.000024
ORF3a209S209StcAtcT33C.140.012987
ORF3a209S209StcAtcT13P.1.160.000374
ORF3a209S209StcAtcT22AY.1190.000071
ORF3a209S209StcAtcT12AY.330.000067
ORF3a209S209StcAtcT22AY.4.20.000043
ORF3a209S209StcAtcT22AZ.20.001642
ORF3a209S209StcAtcT22B.1.6210.000177
ORF3a209S209StcAtcT11AE.80.000489
ORF3a209S209StcAtcT11AY.240.000431
ORF3a209S209StcAtcT11AY.320.000532
ORF3a209S209StcAtcT11AY.590.00053
ORF3a209S209StcAtcT11AY.60.000041
ORF3a209S209StcAtcT11AY.740.000116
ORF3a209S209StcAtcT11AY.940.000443
ORF3a209S209StcAtcT11AY.98.10.000048
ORF3a209S209StcAtcT11B.1.1.480.002874
ORF3a209S209StcAtcT11B.1.2580.000067
ORF3a209S209StcAtcT11B.1.351.20.000303
ORF3a209S209StcAtcT11B.1.36.220.001208
ORF3a209S209StcAtcT11B.1.438.10.000107
ORF3a209S209StcAtcT11P.1.150.000232
ORF3a209S209StcAtcT11P.20.000187