CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 20

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a20I20IsynatCatT12300116730.94902425450-25452
ORF3a20I20IsynatCatA123006270.050975625450-25452
ORF3a20I20MnonsynatCatG22902290125450-25452
ORF3a20I20deldelATC---19841984125450-25452
ORF3a20I20VnonsynAtcGtc180918080.99944725450-25452
ORF3a20I20VnonsynAtCGtT180910.00055279225450-25452
ORF3a20I20TnonsynaTcaCc5915890.99661625450-25452
ORF3a20I20TnonsynaTCaCT59120.0033840925450-25452
ORF3a20I20FnonsynAtcTtc5375360.99813825450-25452
ORF3a20I20FnonsynAtCTtT53710.001862225450-25452
ORF3a20I20NnonsynaTcaAc65640.98461525450-25452
ORF3a20I20NnonsynaTCaAT6510.015384625450-25452
ORF3a20I20LnonsynAtcCtc46420.91304325450-25452
ORF3a20I20LnonsynAtCTtA4620.043478325450-25452
ORF3a20I20LnonsynAtCTtG4620.043478325450-25452
ORF3a20I20SnonsynaTcaGc33310.93939425450-25452
ORF3a20I20SnonsynaTCaGT3320.060606125450-25452
ORF3a20I20del1delAtc-tc1180.72727325450-25452
ORF3a20I20del1delatCat-1110.090909125450-25452
ORF3a20I20del1delAtCNt-1110.090909125450-25452
ORF3a20I20del1delaTca-c1110.090909125450-25452
ORF3a20I20del2delATc--c1080.825450-25452
ORF3a20I20del2delATC--N1010.125450-25452
ORF3a20I20del2delaTCa--1010.125450-25452
ORF3a20I20KnonsynaTCaAA22125450-25452
ORF3a20I20RnonsynATcCGc11125450-25452

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a20I20IatCatT1167312300All0.002233
ORF3a20I20IatCatA62712300All0.00012
ORF3a20I20IatCatT35503609B.1.1.70.003178
ORF3a20I20IatCatA593609B.1.1.70.000053
ORF3a20I20IatCatT31043109AY.40.004831
ORF3a20I20IatCatA53109AY.40.000008
ORF3a20I20MatCatG22902290All0.000438
ORF3a20I20MatCatG21742174B.1.6210.19244
ORF3a20I20delATC---19841984All0.000379
ORF3a20I20VAtcGtc18081809All0.000346
ORF3a20I20VAtCGtT11809All0
ORF3a20I20delATC---12711271B.1.214.20.76199
ORF3a20I20VAtcGtc12571257B.1.1600.039203
ORF3a20I20IatCatT11741174AY.120.10.376886
ORF3a20I20TaTcaCc589591All0.000113
ORF3a20I20TaTCaCT2591All0
ORF3a20I20IatCatT387569B.1.617.20.001457
ORF3a20I20IatCatA182569B.1.617.20.000685
ORF3a20I20FAtcTtc536537All0.000103
ORF3a20I20FAtCTtT1537All0
ORF3a20I20FAtcTtc411412AY.40.00064
ORF3a20I20FAtCTtT1412AY.40.000002
ORF3a20I20IatCatT261262B.1.20.002298
ORF3a20I20IatCatA1262B.1.20.000009
ORF3a20I20IatCatA205244AY.1020.005435
ORF3a20I20IatCatT39244AY.1020.001034
ORF3a20I20IatCatT237239AY.250.001426
ORF3a20I20IatCatA2239AY.250.000012
ORF3a20I20IatCatT144151AY.440.000876
ORF3a20I20IatCatA7151AY.440.000043
ORF3a20I20IatCatT146146P.10.0023
ORF3a20I20VAtcGtc143143B.1.1.70.000128
ORF3a20I20delATC---143143B.1.1.70.000128
ORF3a20I20IatCatT125125B.1.2210.008879
ORF3a20I20IatCatT118124AY.430.000523
ORF3a20I20IatCatA6124AY.430.000027
ORF3a20I20IatCatT123124AY.750.006891
ORF3a20I20IatCatA1124AY.750.000056
ORF3a20I20IatCatT121121B.1.6370.008842
ORF3a20I20IatCatT112112B.10.001026
ORF3a20I20delATC---104104B.1.617.30.310448
ORF3a20I20TaTcaCc8888B.1.1.2910.06533
ORF3a20I20IatCatT7784AY.1200.002863
ORF3a20I20IatCatA784AY.1200.00026
ORF3a20I20IatCatT8081B.1.10.001451
ORF3a20I20IatCatA181B.1.10.000018
ORF3a20I20IatCatT7780AY.1030.000478
ORF3a20I20IatCatA380AY.1030.000019
ORF3a20I20delATC---7373AY.440.000444
ORF3a20I20VAtcGtc7373B.1.36.290.037765
ORF3a20I20IatCatT7272B.1.5260.001692
ORF3a20I20VAtcGtc7272B.1.617.20.000271
ORF3a20I20IatCatT7070B.1.1.1920.161663
ORF3a20I20IatCatT6868AY.260.001925
ORF3a20I20TaTcaCc6868B.1.617.20.000256
ORF3a20I20IatCatA6266C.370.007196
ORF3a20I20IatCatT466C.370.000464
ORF3a20I20NaTcaAc6465All0.000012
ORF3a20I20NaTCaAT165All0
ORF3a20I20IatCatT6060B.1.1770.00079
ORF3a20I20IatCatT5757B.1.1.1800.612903
ORF3a20I20delATC---5757B.1.20.000502
ORF3a20I20IatCatT2955AY.390.000717
ORF3a20I20IatCatA2655AY.390.000642
ORF3a20I20IatCatT5454B.1.1.3180.016295
ORF3a20I20TaTcaCc5353B.1.1.70.000047
ORF3a20I20TaTcaCc5050AY.40.000078
ORF3a20I20IatCatT5050B.1.1.270.282486
ORF3a20I20MatCatG5050B.1.617.20.000188
ORF3a20I20LAtcCtc4246All0.000008
ORF3a20I20LAtCTtA246All0
ORF3a20I20LAtCTtG246All0
ORF3a20I20FAtcTtc4646B.1.20.000405
ORF3a20I20delATC---4141AY.40.000064
ORF3a20I20TaTcaCc4040AY.430.000177
ORF3a20I20IatCatT3939AY.46.60.002816
ORF3a20I20IatCatT3737AY.46.50.007341
ORF3a20I20IatCatT3636B.1.1.3170.014821
ORF3a20I20IatCatT3636B.1.4290.000847
ORF3a20I20IatCatT3434AY.4.20.000737
ORF3a20I20SaTcaGc3133All0.000006
ORF3a20I20SaTCaGT233All0
ORF3a20I20IatCatT3232B.1.1.100.035674
ORF3a20I20IatCatT3131AY.1000.001426
ORF3a20I20IatCatT3030AY.23.10.012521
ORF3a20I20TaTcaCc3030AY.440.000183
ORF3a20I20IatCatT3030B.1.1.2220.00612
ORF3a20I20IatCatT2929AY.30.000288
ORF3a20I20VAtcGtc2929B.1.1.2840.003115
ORF3a20I20IatCatT2728B.1.1600.000842
ORF3a20I20IatCatA128B.1.1600.000031
ORF3a20I20IatCatT2127AY.230.001465
ORF3a20I20IatCatA627AY.230.000418
ORF3a20I20IatCatT2626P.1.70.008301
ORF3a20I20NaTcaAc2525AY.40.000039
ORF3a20I20IatCatT2525B.1.2430.00174
ORF3a20I20IatCatT2525P.1.170.004044
ORF3a20I20delATC---2424B.10.00022
ORF3a20I20LAtcCtc2424B.1.1.70.000021
ORF3a20I20delATC---2424B.1.177.600.005242
ORF3a20I20IatCatT2424B.1.3690.006845
ORF3a20I20MatCatG2323AY.980.001817
ORF3a20I20NaTcaAc2121AY.4.50.002257
ORF3a20I20IatCatT2121B.1.1.10.006861
ORF3a20I20VAtcGtc2020AY.250.00012
ORF3a20I20IatCatT2020B.1.3510.000595
ORF3a20I20VAtcGtc1818AY.40.000028
ORF3a20I20TaTcaCc1818AY.570.011811
ORF3a20I20IatCatT1818AY.99.20.001659
ORF3a20I20MatCatG1818B.10.000165
ORF3a20I20TaTcaCc1818B.1.20.000158
ORF3a20I20IatCatT1717AY.290.000268
ORF3a20I20VAtcGtc1717AY.440.000103
ORF3a20I20IatCatT1717AY.610.001781
ORF3a20I20IatCatT1717AY.90.001149
ORF3a20I20IatCatT1517B.1.1.2140.000832
ORF3a20I20IatCatA217B.1.1.2140.000111
ORF3a20I20IatCatT1717B.1.2580.001131
ORF3a20I20IatCatT1717B.1.6210.001505
ORF3a20I20IatCatA1416AY.1160.004015
ORF3a20I20IatCatT216AY.1160.000574
ORF3a20I20IatCatT1616AY.39.10.000634
ORF3a20I20IatCatT1516AY.50.00031
ORF3a20I20IatCatA116AY.50.000021
ORF3a20I20delATC---1616B.1.617.20.00006
ORF3a20I20VAtcGtc1616P.10.000252
ORF3a20I20IatCatT1616P.1.100.004312
ORF3a20I20IatCatT1515AY.270.000971
ORF3a20I20IatCatT1515B.1.2340.001979
ORF3a20I20delATC---1414B.1.1770.000184
ORF3a20I20TaTcaCc1414P.10.000221
ORF3a20I20VAtcGtc1414P.30.022329
ORF3a20I20TaTcaCc1313AY.30.000129
ORF3a20I20VAtcGtc1313AY.30.000129
ORF3a20I20IatCatT1313B.1.1.1570.011872
ORF3a20I20IatCatT1313B.1.177.570.003653
ORF3a20I20IatCatT1313B.1.5250.001471
ORF3a20I20delATC---1313P.10.000205
ORF3a20I20IatCatT1212AY.1190.000424
ORF3a20I20IatCatT1012AY.200.000389
ORF3a20I20IatCatA212AY.200.000078
ORF3a20I20IatCatA712AY.46.20.004447
ORF3a20I20IatCatT512AY.46.20.003177
ORF3a20I20IatCatT1212AY.9.20.000441
ORF3a20I20TaTcaCc1212B.10.00011
ORF3a20I20IatCatT1212B.1.1.280.003735
ORF3a20I20IatCatT1212B.1.1.5190.000477
ORF3a20I20FAtcTtc1212B.1.4380.078431
ORF3a20I20FAtcTtc1212B.1.617.20.000045
ORF3a20I20del1Atc-tc811All0.000002
ORF3a20I20del1atCat-111All0
ORF3a20I20del1aTca-c111All0
ORF3a20I20del1AtCNt-111All0
ORF3a20I20SaTcaGc1111B.1.1.70.00001
ORF3a20I20del2ATc--c810All0.000002
ORF3a20I20del2aTCa--110All0
ORF3a20I20del2ATC--N110All0
ORF3a20I20TaTcaCc1010AY.250.00006
ORF3a20I20delATC---1010AY.290.000158
ORF3a20I20IatCatT1010AY.330.000668
ORF3a20I20IatCatT1010AY.350.00233
ORF3a20I20IatCatT1010AY.570.006562
ORF3a20I20IatCatT610AY.920.001724
ORF3a20I20IatCatA410AY.920.001149
ORF3a20I20IatCatT1010B.1.2650.012706
ORF3a20I20delATC---99AY.430.00004
ORF3a20I20IatCatT99B.1.1.2650.028391
ORF3a20I20IatCatT99B.1.1.2910.006682
ORF3a20I20delATC---99B.1.2100.01919
ORF3a20I20IatCatT99B.1.5960.000784
ORF3a20I20delATC---99B.1.6390.195652
ORF3a20I20IatCatT88AY.1210.001083
ORF3a20I20TaTcaCc88AY.260.000226
ORF3a20I20TaTcaCc88AY.340.000776
ORF3a20I20VAtcGtc88AY.430.000035
ORF3a20I20IatCatT88AY.98.10.000387
ORF3a20I20IatCatT88B0.001022
ORF3a20I20VAtcGtc88B.10.000073
ORF3a20I20delATC---88B.1.10.000145
ORF3a20I20delATC---88B.1.1.5190.000318
ORF3a20I20delATC---88B.1.4290.000188
ORF3a20I20IatCatT78B.1.5770.004811
ORF3a20I20IatCatA18B.1.5770.000687
ORF3a20I20IatCatT77AU.10.008861
ORF3a20I20TaTcaCc77AY.1030.000043
ORF3a20I20IatCatT77AY.1090.005178
ORF3a20I20IatCatT57AY.1170.000423
ORF3a20I20IatCatA27AY.1170.000169
ORF3a20I20IatCatT77AY.1180.000439
ORF3a20I20TaTcaCc77AY.380.003495
ORF3a20I20IatCatT77AY.450.000852
ORF3a20I20IatCatT57AY.460.00052
ORF3a20I20IatCatA27AY.460.000208
ORF3a20I20IatCatT67AY.930.001638
ORF3a20I20IatCatA17AY.930.000273
ORF3a20I20delATC---77B.1.1.3170.002882
ORF3a20I20TaTcaCc77B.1.4290.000165
ORF3a20I20VAtcGtc77B.1.5260.000165
ORF3a20I20IatCatT77C.36.30.003971
ORF3a20I20IatCatT77P.1.160.002619
ORF3a20I20IatCatT66AE.80.002934
ORF3a20I20IatCatT66AY.116.10.001869
ORF3a20I20IatCatT66AY.3.10.000512
ORF3a20I20TaTcaCc66AY.350.001398
ORF3a20I20FAtcTtc66AY.390.000148
ORF3a20I20IatCatT66AY.4.40.002455
ORF3a20I20delATC---66AY.4.50.000645
ORF3a20I20IatCatT66AY.410.001764
ORF3a20I20IatCatT66AY.420.000241
ORF3a20I20IatCatT66AY.470.000187
ORF3a20I20IatCatT56AY.980.000395
ORF3a20I20IatCatA16AY.980.000079
ORF3a20I20FAtcTtc66B.10.000055
ORF3a20I20FAtcTtc66B.1.1.70.000005
ORF3a20I20del1Atc-tc56B.1.1.70.000004
ORF3a20I20del1aTca-c16B.1.1.70.000001
ORF3a20I20IatCatT66B.1.177.760.014963
ORF3a20I20IatCatT66B.1.360.000875
ORF3a20I20delATC---66P.1.140.000287
ORF3a20I20IatCatT66P.1.140.000287
ORF3a20I20VAtcGtc55AY.1030.000031
ORF3a20I20delATC---55AY.1030.000031
ORF3a20I20delATC---55AY.250.00003
ORF3a20I20SaTcaGc55AY.4.20.000108
ORF3a20I20TaTcaCc55AY.60.000206
ORF3a20I20NaTcaAc55AY.90.000338
ORF3a20I20TaTcaCc55B.1.10.000091
ORF3a20I20IatCatT55B.1.1.1530.005476
ORF3a20I20TaTcaCc55B.1.1.2220.00102
ORF3a20I20VAtcGtc55B.1.1770.000066
ORF3a20I20TaTcaCc55B.1.1770.000066
ORF3a20I20delATC---55B.1.214.30.035714
ORF3a20I20IatCatT55B.1.36.290.002587
ORF3a20I20delATC---55B.1.36.290.002587
ORF3a20I20TaTcaCc55C.90.151515
ORF3a20I20FAtcTtc55P.10.000079
ORF3a20I20LAtCTtA240.111111
ORF3a20I20LAtCTtG240.111111
ORF3a20I20VAtcGtc44AY.1000.000184
ORF3a20I20VAtcGtc44AY.1020.000106
ORF3a20I20IatCatT44AY.130.000644
ORF3a20I20TaTcaCc44AY.200.000155
ORF3a20I20LAtcCtc44AY.250.000024
ORF3a20I20delATC---44AY.260.000113
ORF3a20I20LAtcCtc44AY.290.000063
ORF3a20I20SaTcaGc44AY.40.000006
ORF3a20I20VAtcGtc44AY.4.20.000087
ORF3a20I20FAtcTtc44AY.430.000018
ORF3a20I20delATC---44AY.46.20.002541
ORF3a20I20IatCatT34AY.46.40.000494
ORF3a20I20IatCatA14AY.46.40.000165
ORF3a20I20VAtcGtc44AY.50.000083
ORF3a20I20SaTcaGc24B0.000256
ORF3a20I20SaTCaGT24B0.000256
ORF3a20I20IatCatT44B.1.1.1410.008048
ORF3a20I20IatCatT44B.1.1.250.002274
ORF3a20I20TaTcaCc44B.1.1.3060.001754
ORF3a20I20del2ATc--c44B.1.1.70.000004
ORF3a20I20IatCatT44B.1.1490.013699
ORF3a20I20delATC---44B.1.2140.014652
ORF3a20I20delATC---44B.1.214.10.08
ORF3a20I20IatCatT44B.1.2180.020619
ORF3a20I20IatCatT44B.1.2400.000862
ORF3a20I20IatCatT44B.1.3200.004981
ORF3a20I20VAtcGtc44B.1.3510.000119
ORF3a20I20IatCatT44B.1.438.10.000429
ORF3a20I20IatCatT44B.1.4700.005618
ORF3a20I20IatCatT44B.1.4800.00995
ORF3a20I20TaTcaCc44B.1.5170.001708
ORF3a20I20TaTcaCc44B.1.5260.000094
ORF3a20I20IatCatT44B.1.6090.001918
ORF3a20I20MatCatG44B.1.6230.002146
ORF3a20I20IatCatT44P.20.000747
ORF3a20I20TaTCaCT23A.10.000564
ORF3a20I20TaTcaCc13A.10.000282
ORF3a20I20TaTcaCc33AY.1000.000138
ORF3a20I20FAtcTtc33AY.1200.000112
ORF3a20I20TaTcaCc33AY.1200.000112
ORF3a20I20TaTcaCc33AY.1210.000406
ORF3a20I20IatCatT33AY.160.001139
ORF3a20I20VAtcGtc33AY.190.003421
ORF3a20I20VAtcGtc33AY.230.000209
ORF3a20I20TaTcaCc33AY.290.000047
ORF3a20I20SaTcaGc33AY.30.00003
ORF3a20I20IatCatT33AY.340.000291
ORF3a20I20IatCatT33AY.34.10.00153
ORF3a20I20IatCatT33AY.360.000445
ORF3a20I20TaTcaCc33AY.390.000074
ORF3a20I20VAtcGtc33AY.390.000074
ORF3a20I20del1Atc-tc33AY.440.000018
ORF3a20I20VAtcGtc33AY.450.000365
ORF3a20I20delATC---33AY.50.000062
ORF3a20I20IatCatT33AY.590.001589
ORF3a20I20IatCatT33AY.680.000821
ORF3a20I20IatCatT33AY.75.10.000541
ORF3a20I20NaTcaAc33AY.80.001818
ORF3a20I20FAtcTtc33AY.98.10.000145
ORF3a20I20VAtcGtc33B.1.1.1920.006928
ORF3a20I20VAtcGtc33B.1.1.250.001706
ORF3a20I20delATC---33B.1.1.2910.002227
ORF3a20I20IatCatT33B.1.1.3030.008287
ORF3a20I20IatCatT33B.1.1.630.001157
ORF3a20I20IatCatT33B.1.1110.003525
ORF3a20I20IatCatT33B.1.177.180.00348
ORF3a20I20TaTcaCc33B.1.177.210.000229
ORF3a20I20VAtcGtc33B.1.20.000026
ORF3a20I20delATC---33B.1.2210.000213
ORF3a20I20VAtcGtc33B.1.2340.000396
ORF3a20I20TaTcaCc33B.1.2580.0002
ORF3a20I20TaTcaCc33B.1.3360.007317
ORF3a20I20IatCatT33B.1.3490.002144
ORF3a20I20TaTcaCc33B.1.3510.000089
ORF3a20I20IatCatT33B.1.3670.002377
ORF3a20I20IatCatT33B.1.466.20.001174
ORF3a20I20IatCatT33B.1.5950.000783
ORF3a20I20TaTcaCc33B.1.5960.000261
ORF3a20I20IatCatT33B.1.6040.051724
ORF3a20I20IatCatT33B.1.617.10.000387
ORF3a20I20TaTcaCc33B.1.6370.000219
ORF3a20I20IatCatT33P.1.150.000697
ORF3a20I20delATC---33Q.10.000379
ORF3a20I20delATC---33U.30.011583
ORF3a20I20FAtcTtc220.111111
ORF3a20I20IatCatA220.111111
ORF3a20I20MatCatG220.111111
ORF3a20I20KaTCaAA220.111111
ORF3a20I20IatCatA12A0.000387
ORF3a20I20IatCatT12A0.000387
ORF3a20I20KaTCaAA22All0
ORF3a20I20delATC---22AY.1020.000053
ORF3a20I20FAtcTtc22AY.1030.000012
ORF3a20I20TaTcaCc22AY.1060.00067
ORF3a20I20TaTcaCc22AY.1080.002205
ORF3a20I20VAtcGtc22AY.1100.000225
ORF3a20I20delATC---22AY.1110.000366
ORF3a20I20IatCatT22AY.1130.000285
ORF3a20I20IatCatA22AY.1140.000462
ORF3a20I20TaTcaCc22AY.1170.000169
ORF3a20I20VAtcGtc22AY.1170.000169
ORF3a20I20delATC---22AY.1180.000125
ORF3a20I20IatCatT22AY.16.10.00094
ORF3a20I20IatCatA22AY.190.002281
ORF3a20I20TaTcaCc22AY.230.000139
ORF3a20I20delATC---22AY.270.000129
ORF3a20I20IatCatT22AY.300.000791
ORF3a20I20VAtcGtc22AY.330.000134
ORF3a20I20delATC---22AY.390.000049
ORF3a20I20TaTcaCc22AY.450.000243
ORF3a20I20delATC---22AY.470.000062
ORF3a20I20VAtcGtc22AY.470.000062
ORF3a20I20IatCatT22AY.490.00639
ORF3a20I20IatCatT22AY.5.40.000553
ORF3a20I20VAtcGtc22AY.510.001818
ORF3a20I20VAtcGtc22AY.540.000191
ORF3a20I20delATC---22AY.540.000191
ORF3a20I20IatCatT22AY.540.000191
ORF3a20I20VAtcGtc22AY.550.001835
ORF3a20I20VAtcGtc22AY.60.000082
ORF3a20I20IatCatT22AY.60.000082
ORF3a20I20VAtcGtc22AY.610.00021
ORF3a20I20delATC---22AY.790.002421
ORF3a20I20VAtcGtc22AY.90.000135
ORF3a20I20LAtcCtc22AY.9.20.000073
ORF3a20I20VAtcGtc22AY.98.10.000097
ORF3a20I20SaTcaGc22B.10.000018
ORF3a20I20FAtcTtc22B.1.10.000036
ORF3a20I20VAtcGtc22B.1.10.000036
ORF3a20I20IatCatT22B.1.1.1610.007067
ORF3a20I20delATC---22B.1.1.2140.000111
ORF3a20I20IatCatT22B.1.1.2840.000215
ORF3a20I20TaTcaCc22B.1.1.3110.000716
ORF3a20I20IatCatT22B.1.1.330.000842
ORF3a20I20IatCatT22B.1.1.390.001019
ORF3a20I20IatCatT22B.1.1.4090.005666
ORF3a20I20IatCatT22B.1.1.4320.002532
ORF3a20I20VAtcGtc22B.1.1.4400.023529
ORF3a20I20TaTcaCc22B.1.1.5190.000079
ORF3a20I20NaTcaAc22B.1.1.70.000002
ORF3a20I20IatCatT22B.1.1.700.000682
ORF3a20I20IatCatT22B.1.160.250.022222
ORF3a20I20IatCatT22B.1.177.210.000153
ORF3a20I20delATC---22B.1.177.40.000422
ORF3a20I20IatCatT22B.1.177.480.00625
ORF3a20I20IatCatT22B.1.177.600.000437
ORF3a20I20VAtcGtc22B.1.177.650.001331
ORF3a20I20IatCatT22B.1.177.690.002967
ORF3a20I20IatCatT22B.1.177.70.00033
ORF3a20I20IatCatT22B.1.177.730.001133
ORF3a20I20MatCatG22B.1.177.730.001133
ORF3a20I20IatCatT22B.1.177.860.000367
ORF3a20I20IatCatT22B.1.177.870.001456
ORF3a20I20IatCatT22B.1.221.30.001667
ORF3a20I20TaTcaCc22B.1.2400.000431
ORF3a20I20VAtcGtc22B.1.2470.029851
ORF3a20I20IatCatT22B.1.2700.011236
ORF3a20I20IatCatT22B.1.3110.000549
ORF3a20I20IatCatT22B.1.3330.021053
ORF3a20I20IatCatT22B.1.351.50.001199
ORF3a20I20TaTcaCc22B.1.36.290.001035
ORF3a20I20delATC---22B.1.4090.001563
ORF3a20I20FAtcTtc22B.1.4270.000101
ORF3a20I20delATC---22B.1.4270.000101
ORF3a20I20TaTcaCc22B.1.5610.000794
ORF3a20I20IatCatT22B.1.619.10.001283
ORF3a20I20VAtcGtc22B.1.6210.000177
ORF3a20I20IatCatA12B.60.00091
ORF3a20I20IatCatT12B.60.00091
ORF3a20I20IatCatT22C.260.014706
ORF3a20I20MatCatG22C.370.000232
ORF3a20I20IatCatA12D.20.000075
ORF3a20I20IatCatT12D.20.000075
ORF3a20I20IatCatT22N.40.008511
ORF3a20I20MatCatG22P.10.000032
ORF3a20I20IatCatT22Q.80.00033
ORF3a20I20IatCatT11A.2.30.004739
ORF3a20I20IatCatT11A.2.40.003367
ORF3a20I20delATC---11A.2.50.000499
ORF3a20I20delATC---11A.23.10.000704
ORF3a20I20IatCatT11A.23.10.000704
ORF3a20I20IatCatT11A.280.002646
ORF3a20I20IatCatT11AD.20.000219
ORF3a20I20RATcCGc11All0
ORF3a20I20IatCatT11AM.40.003571
ORF3a20I20VAtcGtc11AY.1010.00049
ORF3a20I20FAtcTtc11AY.1020.000027
ORF3a20I20TaTcaCc11AY.1020.000027
ORF3a20I20IatCatA11AY.1050.000643
ORF3a20I20delATC---11AY.1050.000643
ORF3a20I20VAtcGtc11AY.1090.00074
ORF3a20I20IatCatT11AY.110.001339
ORF3a20I20IatCatT11AY.1100.000113
ORF3a20I20TaTcaCc11AY.1110.000183
ORF3a20I20delATC---11AY.1170.000085
ORF3a20I20VAtcGtc11AY.1180.000063
ORF3a20I20FAtcTtc11AY.1190.000035
ORF3a20I20NaTcaAc11AY.1200.000037
ORF3a20I20delATC---11AY.1200.000037
ORF3a20I20IatCatT11AY.120.20.001285
ORF3a20I20IatCatT11AY.120.2.10.000498
ORF3a20I20FAtcTtc11AY.1210.000135
ORF3a20I20IatCatT11AY.140.000088
ORF3a20I20TaTcaCc11AY.140.000088
ORF3a20I20TaTcaCc11AY.16.10.00047
ORF3a20I20NaTcaAc11AY.170.008197
ORF3a20I20delATC---11AY.190.00114
ORF3a20I20delATC---11AY.200.000039
ORF3a20I20LAtcCtc11AY.230.00007
ORF3a20I20delATC---11AY.230.00007
ORF3a20I20MatCatG11AY.230.00007
ORF3a20I20MatCatG11AY.250.000006
ORF3a20I20SaTcaGc11AY.250.000006
ORF3a20I20VAtcGtc11AY.260.000028
ORF3a20I20TaTcaCc11AY.270.000065
ORF3a20I20IatCatT11AY.280.00189
ORF3a20I20LAtcCtc11AY.29.10.000221
ORF3a20I20IatCatT11AY.29.10.000221
ORF3a20I20FAtcTtc11AY.30.00001
ORF3a20I20delATC---11AY.3.10.000085
ORF3a20I20TaTcaCc11AY.300.000396
ORF3a20I20IatCatT11AY.320.000532
ORF3a20I20del1AtCNt-11AY.330.000067
ORF3a20I20TaTcaCc11AY.330.000067
ORF3a20I20delATC---11AY.330.000067
ORF3a20I20VAtcGtc11AY.340.000097
ORF3a20I20VAtCGtT11AY.360.000148
ORF3a20I20IatCatT11AY.370.000316
ORF3a20I20VAtcGtc11AY.370.000316
ORF3a20I20IatCatT11AY.380.000499
ORF3a20I20LAtcCtc11AY.390.000025
ORF3a20I20delATC---11AY.39.10.00004
ORF3a20I20VAtcGtc11AY.39.20.001541
ORF3a20I20MatCatG11AY.40.000002
ORF3a20I20TaTcaCc11AY.4.10.000737
ORF3a20I20TaTcaCc11AY.4.20.000022
ORF3a20I20FAtcTtc11AY.4.50.000107
ORF3a20I20del2ATc--c11AY.4.50.000107
ORF3a20I20IatCatT11AY.4.50.000107
ORF3a20I20TaTcaCc11AY.420.00004
ORF3a20I20del2ATc--c11AY.440.000006
ORF3a20I20TaTcaCc11AY.460.000104
ORF3a20I20LAtcCtc11AY.460.000104
ORF3a20I20delATC---11AY.490.003195
ORF3a20I20TaTcaCc11AY.5.30.000337
ORF3a20I20delATC---11AY.5.40.000277
ORF3a20I20IatCatT11AY.530.000288
ORF3a20I20TaTcaCc11AY.540.000095
ORF3a20I20FAtcTtc11AY.540.000095
ORF3a20I20IatCatT11AY.550.000917
ORF3a20I20TaTcaCc11AY.550.000917
ORF3a20I20IatCatT11AY.580.000907
ORF3a20I20NaTcaAc11AY.580.000907
ORF3a20I20delATC---11AY.60.000041
ORF3a20I20delATC---11AY.600.000938
ORF3a20I20TaTcaCc11AY.610.000105
ORF3a20I20MatCatG11AY.620.000436
ORF3a20I20IatCatT11AY.640.000595
ORF3a20I20IatCatT11AY.650.000533
ORF3a20I20IatCatA11AY.670.000464
ORF3a20I20delATC---11AY.680.000274
ORF3a20I20TaTcaCc11AY.680.000274
ORF3a20I20IatCatT11AY.7.10.000113
ORF3a20I20VAtcGtc11AY.700.000209
ORF3a20I20TaTcaCc11AY.740.000116
ORF3a20I20VAtcGtc11AY.750.000056
ORF3a20I20FAtcTtc11AY.750.000056
ORF3a20I20TaTcaCc11AY.75.10.00018
ORF3a20I20IatCatT11AY.770.001127
ORF3a20I20NaTCaAT11AY.790.001211
ORF3a20I20TaTcaCc11AY.820.001357
ORF3a20I20NaTcaAc11AY.870.000833
ORF3a20I20IatCatA11AY.890.004902
ORF3a20I20delATC---11AY.90.000068
ORF3a20I20TaTcaCc11AY.90.000068
ORF3a20I20FAtcTtc11AY.9.10.000084
ORF3a20I20delATC---11AY.9.20.000037
ORF3a20I20IatCatT11AY.900.000684
ORF3a20I20TaTcaCc11AY.910.00073
ORF3a20I20IatCatA11AY.950.000761
ORF3a20I20VAtcGtc11AY.980.000079
ORF3a20I20delATC---11AY.980.000079
ORF3a20I20TaTcaCc11AY.98.10.000048
ORF3a20I20delATC---11AY.98.10.000048
ORF3a20I20delATC---11AY.990.001049
ORF3a20I20IatCatT11AY.990.001049
ORF3a20I20VAtcGtc11B0.000128
ORF3a20I20NaTcaAc11B.10.000009
ORF3a20I20TaTcaCc11B.1.1.10.000327
ORF3a20I20delATC---11B.1.1.1390.022727
ORF3a20I20TaTcaCc11B.1.1.140.017241
ORF3a20I20TaTcaCc11B.1.1.1520.04
ORF3a20I20IatCatT11B.1.1.1820.090909
ORF3a20I20IatCatT11B.1.1.1960.005714
ORF3a20I20IatCatT11B.1.1.2000.007463
ORF3a20I20VAtcGtc11B.1.1.2140.000055
ORF3a20I20IatCatT11B.1.1.2160.00089
ORF3a20I20delATC---11B.1.1.2160.00089
ORF3a20I20IatCatT11B.1.1.2190.005
ORF3a20I20FAtcTtc11B.1.1.2220.000204
ORF3a20I20IatCatT11B.1.1.2320.001815
ORF3a20I20MatCatG11B.1.1.2360.006897
ORF3a20I20LAtcCtc11B.1.1.250.000569
ORF3a20I20TaTcaCc11B.1.1.250.000569
ORF3a20I20IatCatT11B.1.1.2770.000759
ORF3a20I20IatCatT11B.1.1.3050.003861
ORF3a20I20IatCatT11B.1.1.3060.000438
ORF3a20I20IatCatT11B.1.1.3120.001912
ORF3a20I20TaTcaCc11B.1.1.3180.000302
ORF3a20I20IatCatT11B.1.1.3320.03125
ORF3a20I20IatCatT11B.1.1.3360.016667
ORF3a20I20IatCatT11B.1.1.3540.004386
ORF3a20I20IatCatT11B.1.1.3680.003086
ORF3a20I20FAtcTtc11B.1.1.3690.000446
ORF3a20I20IatCatT11B.1.1.370.000193
ORF3a20I20IatCatT11B.1.1.3750.011905
ORF3a20I20delATC---11B.1.1.4090.002833
ORF3a20I20IatCatT11B.1.1.410.006329
ORF3a20I20IatCatT11B.1.1.4120.007634
ORF3a20I20IatCatT11B.1.1.4160.000905
ORF3a20I20IatCatT11B.1.1.4420.018519
ORF3a20I20IatCatT11B.1.1.5070.008696
ORF3a20I20LAtcCtc11B.1.1.5190.00004
ORF3a20I20delATC---11B.1.1.5280.004808
ORF3a20I20IatCatT11B.1.1.560.017857
ORF3a20I20IatCatT11B.1.1.570.011494
ORF3a20I20IatCatT11B.1.1.610.008772
ORF3a20I20MatCatG11B.1.1.70.000001
ORF3a20I20IatCatT11B.1.1390.000733
ORF3a20I20del2ATC--N11B.1.1420.002899
ORF3a20I20MatCatG11B.1.1570.002985
ORF3a20I20TaTcaCc11B.1.1600.000031
ORF3a20I20IatCatT11B.1.160.160.000929
ORF3a20I20delATC---11B.1.160.330.004425
ORF3a20I20IatCatA11B.1.177.110.001698
ORF3a20I20delATC---11B.1.177.110.001698
ORF3a20I20IatCatT11B.1.177.120.000152
ORF3a20I20delATC---11B.1.177.190.001431
ORF3a20I20FAtcTtc11B.1.177.40.000211
ORF3a20I20IatCatT11B.1.177.530.002392
ORF3a20I20IatCatT11B.1.177.550.002331
ORF3a20I20delATC---11B.1.177.60.000977
ORF3a20I20IatCatT11B.1.177.620.001192
ORF3a20I20delATC---11B.1.177.70.000165
ORF3a20I20IatCatT11B.1.177.710.010101
ORF3a20I20del2ATc--c11B.1.177.760.002494
ORF3a20I20IatCatT11B.1.177.840.006667
ORF3a20I20IatCatT11B.1.177.90.001332
ORF3a20I20delATC---11B.1.1790.003759
ORF3a20I20MatCatG11B.1.20.000009
ORF3a20I20LAtcCtc11B.1.20.000009
ORF3a20I20IatCatT11B.1.2010.005682
ORF3a20I20TaTcaCc11B.1.2060.000816
ORF3a20I20IatCatT11B.1.2130.014925
ORF3a20I20VAtcGtc11B.1.2140.003663
ORF3a20I20RATcCGc11B.1.214.20.0006
ORF3a20I20del2aTCa--11B.1.2180.005155
ORF3a20I20IatCatT11B.1.220.001318
ORF3a20I20NaTcaAc11B.1.2210.000071
ORF3a20I20delATC---11B.1.221.10.002907
ORF3a20I20TaTcaCc11B.1.2340.000132
ORF3a20I20TaTcaCc11B.1.2430.00007
ORF3a20I20VAtcGtc11B.1.2430.00007
ORF3a20I20delATC---11B.1.2580.000067
ORF3a20I20delATC---11B.1.258.100.011364
ORF3a20I20IatCatT11B.1.258.150.018868
ORF3a20I20IatCatT11B.1.258.170.000104
ORF3a20I20VAtcGtc11B.1.258.220.002667
ORF3a20I20IatCatT11B.1.258.70.001912
ORF3a20I20VAtcGtc11B.1.2920.058824
ORF3a20I20IatCatT11B.1.30.002618
ORF3a20I20VAtcGtc11B.1.3110.000275
ORF3a20I20IatCatT11B.1.3360.002439
ORF3a20I20VAtcGtc11B.1.3490.000715
ORF3a20I20delATC---11B.1.3510.00003
ORF3a20I20IatCatT11B.1.36.120.009615
ORF3a20I20delATC---11B.1.36.170.000494
ORF3a20I20delATC---11B.1.36.180.00042
ORF3a20I20TaTcaCc11B.1.36.190.009259
ORF3a20I20delATC---11B.1.36.310.001751
ORF3a20I20IatCatT11B.1.36.310.001751
ORF3a20I20IatCatT11B.1.36.360.000602
ORF3a20I20IatCatT11B.1.3750.00082
ORF3a20I20IatCatT11B.1.3810.007812
ORF3a20I20delATC---11B.1.3890.001002
ORF3a20I20IatCatT11B.1.3960.000706
ORF3a20I20MatCatG11B.1.3960.000706
ORF3a20I20IatCatT11B.1.3980.002976
ORF3a20I20IatCatT11B.1.4040.001302
ORF3a20I20VAtcGtc11B.1.4090.000781
ORF3a20I20IatCatT11B.1.4090.000781
ORF3a20I20IatCatT11B.1.4160.001269
ORF3a20I20SaTcaGc11B.1.4270.00005
ORF3a20I20FAtcTtc11B.1.4290.000024
ORF3a20I20VAtcGtc11B.1.4290.000024
ORF3a20I20SaTcaGc11B.1.4290.000024
ORF3a20I20IatCatT11B.1.4510.008197
ORF3a20I20delATC---11B.1.4590.004082
ORF3a20I20IatCatT11B.1.4590.004082
ORF3a20I20TaTcaCc11B.1.4620.007246
ORF3a20I20IatCatT11B.1.4680.005714
ORF3a20I20IatCatT11B.1.4990.00105
ORF3a20I20MatCatG11B.1.5240.001406
ORF3a20I20IatCatT11B.1.5240.001406
ORF3a20I20delATC---11B.1.5260.000024
ORF3a20I20MatCatG11B.1.5330.009615
ORF3a20I20IatCatT11B.1.5400.009709
ORF3a20I20IatCatT11B.1.5640.000426
ORF3a20I20IatCatT11B.1.5680.001111
ORF3a20I20IatCatT11B.1.5740.002151
ORF3a20I20VAtcGtc11B.1.5750.000303
ORF3a20I20IatCatT11B.1.5760.000907
ORF3a20I20FAtcTtc11B.1.5770.000687
ORF3a20I20IatCatT11B.1.5820.000491
ORF3a20I20delATC---11B.1.5950.000261
ORF3a20I20NaTcaAc11B.1.5990.00365
ORF3a20I20VAtcGtc11B.1.6000.005848
ORF3a20I20delATC---11B.1.6090.000479
ORF3a20I20del2ATc--c11B.1.617.20.000004
ORF3a20I20SaTcaGc11B.1.617.20.000004
ORF3a20I20NaTcaAc11B.1.617.20.000004
ORF3a20I20delATC---11B.1.6190.000871
ORF3a20I20IatCatT11B.1.6200.000946
ORF3a20I20VAtcGtc11B.1.6200.000946
ORF3a20I20TaTcaCc11B.1.6210.000089
ORF3a20I20IatCatT11B.1.6280.000352
ORF3a20I20delATC---11B.1.6280.000352
ORF3a20I20del1atCat-11B.1.6370.000073
ORF3a20I20delATC---11B.1.6380.052632
ORF3a20I20IatCatT11B.1.9.40.006135
ORF3a20I20delATC---11B.3.10.001658
ORF3a20I20IatCatT11B.400.000364
ORF3a20I20delATC---11B.550.00295
ORF3a20I20IatCatA11B.610.005747
ORF3a20I20IatCatT11C.110.010638
ORF3a20I20IatCatT11C.140.004329
ORF3a20I20IatCatT11C.2.10.006667
ORF3a20I20IatCatT11C.230.005814
ORF3a20I20FAtcTtc11C.360.000911
ORF3a20I20VAtcGtc11C.370.000116
ORF3a20I20VAtcGtc11C.37.10.002618
ORF3a20I20IatCatT11C.80.004464
ORF3a20I20TaTcaCc11D.20.000075
ORF3a20I20IatCatT11N.30.005814
ORF3a20I20IatCatT11N.50.001767
ORF3a20I20LAtcCtc11P.10.000016
ORF3a20I20VAtcGtc11P.1.10.000318
ORF3a20I20IatCatT11P.1.10.000318
ORF3a20I20MatCatG11P.1.140.000048
ORF3a20I20delATC---11P.1.150.000232
ORF3a20I20MatCatG11P.1.150.000232
ORF3a20I20IatCatT11P.1.20.001156
ORF3a20I20VAtcGtc11P.1.70.000319
ORF3a20I20IatCatT11P.60.003145
ORF3a20I20TaTcaCc11Q.10.000126
ORF3a20I20TaTcaCc11Q.80.000165
ORF3a20I20IatCatT11R.10.00009