CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 184

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a184Y184HnonsynTacCac11221122125942-25944
ORF3a184Y184YsyntaCtaT446446125942-25944
ORF3a184Y184CnonsyntActGc214214125942-25944
ORF3a184Y184NnonsynTacAac116116125942-25944
ORF3a184Y184deldelTAC---3232125942-25944
ORF3a184Y184FnonsyntActTc760.85714325942-25944
ORF3a184Y184SnonsyntActCc760.85714325942-25944
ORF3a184Y184SnonsynTAcAGc710.14285725942-25944
ORF3a184Y184FnonsyntACtTT710.14285725942-25944
ORF3a184Y184DnonsynTacGac33125942-25944
ORF3a184Y184XnonsyntaCtaA320.66666725942-25944
ORF3a184Y184XnonsyntaCtaG310.33333325942-25944
ORF3a184Y184QnonsynTaCCaA11125942-25944

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a184Y184HTacCac11221122All0.000215
ORF3a184Y184YtaCtaT446446All0.000085
ORF3a184Y184HTacCac391391B.1.6280.137773
ORF3a184Y184CtActGc214214All0.000041
ORF3a184Y184HTacCac211211B.1.5270.781481
ORF3a184Y184YtaCtaT133133B.1.1.70.000119
ORF3a184Y184HTacCac127127B.1.1770.001672
ORF3a184Y184CtActGc120120B.1.617.20.000452
ORF3a184Y184NTacAac116116All0.000022
ORF3a184Y184NTacAac102102AY.40.000159
ORF3a184Y184HTacCac102102B.1.1.70.000091
ORF3a184Y184YtaCtaT101101AY.40.000157
ORF3a184Y184CtActGc5959B.1.1.70.000053
ORF3a184Y184delTAC---3232All0.000006
ORF3a184Y184HTacCac3232B.1.617.20.00012
ORF3a184Y184HTacCac2828B.10.000256
ORF3a184Y184YtaCtaT2727P.10.000425
ORF3a184Y184YtaCtaT2525AY.250.00015
ORF3a184Y184YtaCtaT2323AY.440.00014
ORF3a184Y184HTacCac2222B.1.1.3060.009645
ORF3a184Y184HTacCac1818AY.560.028892
ORF3a184Y184YtaCtaT1717B.1.617.20.000064
ORF3a184Y184HTacCac1616AY.40.000025
ORF3a184Y184HTacCac1515AY.34.10.007649
ORF3a184Y184HTacCac1212AY.420.000483
ORF3a184Y184HTacCac1010B.1.6270.020202
ORF3a184Y184HTacCac99AY.250.000054
ORF3a184Y184YtaCtaT88AY.4.20.000174
ORF3a184Y184StActCc67All0.000001
ORF3a184Y184FtActTc67All0.000001
ORF3a184Y184STAcAGc17All0
ORF3a184Y184FtACtTT17All0
ORF3a184Y184YtaCtaT77AY.260.000198
ORF3a184Y184HTacCac77B.1.10.000127
ORF3a184Y184YtaCtaT77B.1.1.3720.004821
ORF3a184Y184delTAC---77B.1.1.70.000006
ORF3a184Y184HTacCac77P.10.00011
ORF3a184Y184YtaCtaT66AY.1020.000159
ORF3a184Y184HTacCac66AY.470.000187
ORF3a184Y184CtActGc66AY.980.000474
ORF3a184Y184NTacAac66B.1.1.70.000005
ORF3a184Y184YtaCtaT66B.1.3510.000178
ORF3a184Y184YtaCtaT66B.1.4290.000141
ORF3a184Y184YtaCtaT66B.1.6210.000531
ORF3a184Y184HTacCac55AY.380.002496
ORF3a184Y184CtActGc55AY.40.000008
ORF3a184Y184HTacCac55AY.410.00147
ORF3a184Y184delTAC---55AY.430.000022
ORF3a184Y184CtActGc55AY.920.001436
ORF3a184Y184HTacCac55B.1.1600.000156
ORF3a184Y184HTacCac44AY.1030.000025
ORF3a184Y184HTacCac44AY.290.000063
ORF3a184Y184HTacCac44AY.4.20.000087
ORF3a184Y184YtaCtaT44AY.430.000018
ORF3a184Y184HTacCac44AY.430.000018
ORF3a184Y184HTacCac44AY.440.000024
ORF3a184Y184YtaCtaT44B.10.000037
ORF3a184Y184HTacCac44B.1.20.000035
ORF3a184Y184HTacCac44B.1.4290.000094
ORF3a184Y184DTacGac33All0.000001
ORF3a184Y184XtaCtaA23All0
ORF3a184Y184XtaCtaG13All0
ORF3a184Y184HTacCac33AY.1020.00008
ORF3a184Y184HTacCac33AY.200.000117
ORF3a184Y184NTacAac33AY.390.000074
ORF3a184Y184YtaCtaT33AY.4.50.000322
ORF3a184Y184CtActGc33AY.440.000018
ORF3a184Y184YtaCtaT33AY.450.000365
ORF3a184Y184StActCc33B.1.1.70.000003
ORF3a184Y184delTAC---33B.1.1770.00004
ORF3a184Y184YtaCtaT33B.1.1770.00004
ORF3a184Y184HTacCac33B.1.177.40.000633
ORF3a184Y184YtaCtaT33B.1.20.000026
ORF3a184Y184HTacCac33B.1.3510.000089
ORF3a184Y184FtActTc33B.1.617.20.000011
ORF3a184Y184delTAC---33B.1.617.20.000011
ORF3a184Y184CtActGc33P.1.140.000143
ORF3a184Y184YtaCtaT22AY.1000.000092
ORF3a184Y184HTacCac22AY.1190.000071
ORF3a184Y184HTacCac22AY.240.000862
ORF3a184Y184HTacCac22AY.30.00002
ORF3a184Y184HTacCac22AY.330.000134
ORF3a184Y184HTacCac22AY.340.000194
ORF3a184Y184YtaCtaT22AY.390.000049
ORF3a184Y184HTacCac22AY.450.000243
ORF3a184Y184HTacCac22AY.50.000041
ORF3a184Y184YtaCtaT22AY.60.000082
ORF3a184Y184HTacCac22AY.750.000112
ORF3a184Y184HTacCac22AY.9.20.000073
ORF3a184Y184YtaCtaT22B0.000256
ORF3a184Y184STAcAGc12B.10.000009
ORF3a184Y184StActCc12B.10.000009
ORF3a184Y184YtaCtaT22B.1.1.2410.004141
ORF3a184Y184HTacCac22B.1.1.280.000622
ORF3a184Y184YtaCtaT22B.1.1.460.008734
ORF3a184Y184YtaCtaT22B.1.1.4860.003155
ORF3a184Y184CtActGc22B.1.177.320.002699
ORF3a184Y184CtActGc22B.1.20.000018
ORF3a184Y184HTacCac22B.1.2430.000139
ORF3a184Y184HTacCac22B.1.3460.002621
ORF3a184Y184YtaCtaT22B.1.4270.000101
ORF3a184Y184HTacCac22B.1.4740.003802
ORF3a184Y184HTacCac22B.1.5380.016129
ORF3a184Y184YtaCtaT22B.1.5600.009259
ORF3a184Y184HTacCac22P.1.120.000968
ORF3a184Y184HTacCac11A.10.000282
ORF3a184Y184CtActGc11A.10.000282
ORF3a184Y184QTaCCaA11All0
ORF3a184Y184YtaCtaT11AY.10.000396
ORF3a184Y184CtActGc11AY.1000.000046
ORF3a184Y184QTaCCaA11AY.1030.000006
ORF3a184Y184YtaCtaT11AY.1110.000183
ORF3a184Y184YtaCtaT11AY.1130.000142
ORF3a184Y184YtaCtaT11AY.1180.000063
ORF3a184Y184HTacCac11AY.1180.000063
ORF3a184Y184StActCc11AY.1190.000035
ORF3a184Y184delTAC---11AY.1200.000037
ORF3a184Y184YtaCtaT11AY.1200.000037
ORF3a184Y184YtaCtaT11AY.200.000039
ORF3a184Y184YtaCtaT11AY.230.00007
ORF3a184Y184CtActGc11AY.23.10.000417
ORF3a184Y184XtaCtaA11AY.240.000431
ORF3a184Y184XtaCtaA11AY.250.000006
ORF3a184Y184DTacGac11AY.250.000006
ORF3a184Y184YtaCtaT11AY.290.000016
ORF3a184Y184YtaCtaT11AY.300.000396
ORF3a184Y184YtaCtaT11AY.360.000148
ORF3a184Y184DTacGac11AY.40.000002
ORF3a184Y184FtActTc11AY.40.000002
ORF3a184Y184delTAC---11AY.40.000002
ORF3a184Y184delTAC---11AY.4.50.000107
ORF3a184Y184CtActGc11AY.420.00004
ORF3a184Y184FtActTc11AY.430.000004
ORF3a184Y184CtActGc11AY.430.000004
ORF3a184Y184FtActTc11AY.46.20.000635
ORF3a184Y184YtaCtaT11AY.46.40.000165
ORF3a184Y184HTacCac11AY.46.60.000072
ORF3a184Y184YtaCtaT11AY.50.000021
ORF3a184Y184HTacCac11AY.570.000656
ORF3a184Y184HTacCac11AY.590.00053
ORF3a184Y184HTacCac11AY.610.000105
ORF3a184Y184delTAC---11AY.680.000274
ORF3a184Y184delTAC---11AY.7.20.000559
ORF3a184Y184YtaCtaT11AY.750.000056
ORF3a184Y184delTAC---11AY.90.000068
ORF3a184Y184YtaCtaT11AY.9.20.000037
ORF3a184Y184HTacCac11AY.900.000684
ORF3a184Y184YtaCtaT11AY.980.000079
ORF3a184Y184delTAC---11B0.000128
ORF3a184Y184NTacAac11B0.000128
ORF3a184Y184delTAC---11B.10.000009
ORF3a184Y184CtActGc11B.1.10.000018
ORF3a184Y184YtaCtaT11B.1.10.000018
ORF3a184Y184YtaCtaT11B.1.1.10.000327
ORF3a184Y184HTacCac11B.1.1.1570.000913
ORF3a184Y184HTacCac11B.1.1.2160.00089
ORF3a184Y184YtaCtaT11B.1.1.2160.00089
ORF3a184Y184HTacCac11B.1.1.2410.00207
ORF3a184Y184YtaCtaT11B.1.1.3120.001912
ORF3a184Y184CtActGc11B.1.1.3180.000302
ORF3a184Y184NTacAac11B.1.1.3540.004386
ORF3a184Y184YtaCtaT11B.1.1.3540.004386
ORF3a184Y184YtaCtaT11B.1.1.370.000193
ORF3a184Y184HTacCac11B.1.1.390.00051
ORF3a184Y184HTacCac11B.1.1.440.00241
ORF3a184Y184YtaCtaT11B.1.1.5170.006803
ORF3a184Y184YtaCtaT11B.1.1.5190.00004
ORF3a184Y184delTAC---11B.1.1.5190.00004
ORF3a184Y184YtaCtaT11B.1.1.5260.003546
ORF3a184Y184YtaCtaT11B.1.1110.001175
ORF3a184Y184HTacCac11B.1.1570.002985
ORF3a184Y184delTAC---11B.1.1600.000031
ORF3a184Y184YtaCtaT11B.1.160.120.00641
ORF3a184Y184NTacAac11B.1.1770.000013
ORF3a184Y184XtaCtaG11B.1.1770.000013
ORF3a184Y184DTacGac11B.1.177.150.000631
ORF3a184Y184YtaCtaT11B.1.177.210.000076
ORF3a184Y184delTAC---11B.1.177.510.004566
ORF3a184Y184YtaCtaT11B.1.177.570.000281
ORF3a184Y184HTacCac11B.1.177.730.000566
ORF3a184Y184HTacCac11B.1.177.810.000189
ORF3a184Y184YtaCtaT11B.1.177.860.000183
ORF3a184Y184delTAC---11B.1.20.000009
ORF3a184Y184StActCc11B.1.20.000009
ORF3a184Y184HTacCac11B.1.2320.000537
ORF3a184Y184NTacAac11B.1.2320.000537
ORF3a184Y184HTacCac11B.1.258.170.000104
ORF3a184Y184FtACtTT11B.1.3510.00003
ORF3a184Y184HTacCac11B.1.360.000146
ORF3a184Y184delTAC---11B.1.36.10.00114
ORF3a184Y184YtaCtaT11B.1.3690.000285
ORF3a184Y184HTacCac11B.1.4270.00005
ORF3a184Y184CtActGc11B.1.4290.000024
ORF3a184Y184HTacCac11B.1.5760.000907
ORF3a184Y184YtaCtaT11B.1.5960.000087
ORF3a184Y184HTacCac11B.1.6210.000089
ORF3a184Y184CtActGc11B.1.6370.000073
ORF3a184Y184HTacCac11B.1.6370.000073
ORF3a184Y184YtaCtaT11B.400.000364
ORF3a184Y184YtaCtaT11D.20.000075
ORF3a184Y184HTacCac11D.20.000075
ORF3a184Y184YtaCtaT11P.1.120.000484
ORF3a184Y184HTacCac11P.1.20.001156
ORF3a184Y184YtaCtaT11P.1.70.000319
ORF3a184Y184delTAC---11Q.10.000126
ORF3a184Y184NTacAac11Q.30.000145
ORF3a184Y184YtaCtaT11Q.80.000165