CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 15

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a15L15FnonsynttGttT44328436920.98565225435-25437
ORF3a15L15FnonsynttGttC443286360.014347625435-25437
ORF3a15L15LsynTtgCtg756273860.97672625435-25437
ORF3a15L15LsynttGttA75621750.02314225435-25437
ORF3a15L15LsynTtGCtT756210.0001322425435-25437
ORF3a15L15deldelTTG---10211021125435-25437
ORF3a15L15SnonsyntTgtCg1291270.98449625435-25437
ORF3a15L15SnonsyntTGtCA12910.0077519425435-25437
ORF3a15L15SnonsyntTGtCT12910.0077519425435-25437
ORF3a15L15VnonsynTtgGtg1181170.99152525435-25437
ORF3a15L15VnonsynTtGGtT11810.0084745825435-25437
ORF3a15L15del1delTtg-tg77620.80519525435-25437
ORF3a15L15del1delttGtt-77150.19480525435-25437
ORF3a15L15del2delTTg--g21150.71428625435-25437
ORF3a15L15del2deltTGt--2160.28571425435-25437
ORF3a15L15MnonsynTtgAtg2020125435-25437
ORF3a15L15WnonsyntTgtGg1010125435-25437
ORF3a15L15InonsynTtGAtT66125435-25437
ORF3a15L15TnonsynTTGACC620.33333325435-25437
ORF3a15L15TnonsynTTGACA620.33333325435-25437
ORF3a15L15TnonsynTTgACg620.33333325435-25437
ORF3a15L15XnonsyntTgtAg320.66666725435-25437
ORF3a15L15XnonsyntTGtAA310.33333325435-25437
ORF3a15L15HnonsynTTGCAC22125435-25437
ORF3a15L15PnonsynTTGCCA210.525435-25437
ORF3a15L15PnonsynTTgCCg210.525435-25437

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a15L15FttGttT4369244328All0.008357
ORF3a15L15FttGttC63644328All0.000122
ORF3a15L15FttGttT4034540373B.1.1.70.036118
ORF3a15L15FttGttC2840373B.1.1.70.000025
ORF3a15L15LTtgCtg73867562All0.001413
ORF3a15L15LttGttA1757562All0.000033
ORF3a15L15LTtGCtT17562All0
ORF3a15L15LTtgCtg71127113AY.40.011069
ORF3a15L15LttGttA17113AY.40.000002
ORF3a15L15delTTG---10211021All0.000195
ORF3a15L15FttGttT541557AY.40.000842
ORF3a15L15FttGttC16557AY.40.000025
ORF3a15L15FttGttT419419Q.80.069096
ORF3a15L15FttGttC233306B.1.617.20.000877
ORF3a15L15FttGttT73306B.1.617.20.000275
ORF3a15L15delTTG---288288B.1.1.70.000258
ORF3a15L15FttGttT256256B.1.5990.934307
ORF3a15L15FttGttT212222B.10.001942
ORF3a15L15FttGttC10222B.10.000092
ORF3a15L15FttGttT198207B.1.20.001743
ORF3a15L15FttGttC9207B.1.20.000079
ORF3a15L15FttGttC155187AY.430.000687
ORF3a15L15FttGttT32187AY.430.000142
ORF3a15L15FttGttT130133AY.1030.000807
ORF3a15L15FttGttC3133AY.1030.000019
ORF3a15L15FttGttT131131B.1.1.2250.942446
ORF3a15L15StTgtCg127129All0.000024
ORF3a15L15StTGtCA1129All0
ORF3a15L15StTGtCT1129All0
ORF3a15L15VTtgGtg117118All0.000022
ORF3a15L15VTtGGtT1118All0
ORF3a15L15delTTG---9898B.1.1.5190.003892
ORF3a15L15FttGttT9191B.1.10.001651
ORF3a15L15delTTG---9090AY.40.00014
ORF3a15L15LttGttA5088B.1.1.70.000045
ORF3a15L15LTtgCtg3788B.1.1.70.000033
ORF3a15L15LTtGCtT188B.1.1.70.000001
ORF3a15L15FttGttT8183AY.200.003148
ORF3a15L15FttGttC283AY.200.000078
ORF3a15L15delTTG---8383AY.440.000505
ORF3a15L15del1Ttg-tg6277All0.000012
ORF3a15L15del1ttGtt-1577All0.000003
ORF3a15L15LttGttA7272AZ.10.062446
ORF3a15L15FttGttT7272B.1.1600.002246
ORF3a15L15FttGttT6464B.1.1.4651
ORF3a15L15FttGttC5658B.1.6370.004092
ORF3a15L15FttGttT258B.1.6370.000146
ORF3a15L15FttGttT5656B.1.6210.004957
ORF3a15L15LTtgCtg5252AY.390.001285
ORF3a15L15FttGttT5052B.1.4290.001176
ORF3a15L15FttGttC252B.1.4290.000047
ORF3a15L15LTtgCtg4852B.1.617.20.000181
ORF3a15L15LttGttA452B.1.617.20.000015
ORF3a15L15FttGttT4646AY.1200.00171
ORF3a15L15FttGttT4646P.10.000725
ORF3a15L15FttGttC2845AY.440.00017
ORF3a15L15FttGttT1745AY.440.000103
ORF3a15L15LTtgCtg4243AY.1030.000261
ORF3a15L15LttGttA143AY.1030.000006
ORF3a15L15del1Ttg-tg3441B.1.1.70.00003
ORF3a15L15del1ttGtt-741B.1.1.70.000006
ORF3a15L15StTgtCg3838B.1.20.000335
ORF3a15L15FttGttT3737B.1.369.11
ORF3a15L15delTTG---3636B.1.1770.000474
ORF3a15L15FttGttT3636C.36.30.02042
ORF3a15L15delTTG---3434P.10.000536
ORF3a15L15FttGttT2828AY.780.043143
ORF3a15L15FttGttT2828B.1.1.500.019009
ORF3a15L15delTTG---2626AY.250.000156
ORF3a15L15StTgtCg2526B.1.1.70.000022
ORF3a15L15StTGtCT126B.1.1.70.000001
ORF3a15L15FttGttT2626B.1.2580.00173
ORF3a15L15VTtgGtg2425B.1.1.70.000021
ORF3a15L15VTtGGtT125B.1.1.70.000001
ORF3a15L15VTtgGtg2424AY.80.014545
ORF3a15L15FttGttT2323B.1.4270.001161
ORF3a15L15FttGttT2222AY.260.000623
ORF3a15L15delTTG---2222B.1.6200.020814
ORF3a15L15del2TTg--g1521All0.000003
ORF3a15L15del2tTGt--621All0.000001
ORF3a15L15FttGttT2121AY.30.000209
ORF3a15L15FttGttC1821AY.9.10.001507
ORF3a15L15FttGttT321AY.9.10.000251
ORF3a15L15MTtgAtg2020All0.000004
ORF3a15L15FttGttT2020AY.250.00012
ORF3a15L15FttGttT2020AY.46.50.003968
ORF3a15L15FttGttT1720B.1.1770.000224
ORF3a15L15FttGttC320B.1.1770.00004
ORF3a15L15FttGttT1820B.1.3510.000535
ORF3a15L15FttGttC220B.1.3510.000059
ORF3a15L15FttGttT1820B.1.5260.000423
ORF3a15L15FttGttC220B.1.5260.000047
ORF3a15L15delTTG---1919B.10.000174
ORF3a15L15FttGttT1919B.1.177.730.010759
ORF3a15L15delTTG---1919B.1.617.20.000072
ORF3a15L15VTtgGtg1818B.10.000165
ORF3a15L15delTTG---1717B.1.20.00015
ORF3a15L15FttGttT1717B.1.3690.004849
ORF3a15L15delTTG---1616AY.1030.000099
ORF3a15L15delTTG---1616B.1.177.210.001224
ORF3a15L15delTTG---1616B.1.2340.002111
ORF3a15L15FttGttT1616B.1.6090.00767
ORF3a15L15FttGttC1315AY.390.000321
ORF3a15L15FttGttT215AY.390.000049
ORF3a15L15FttGttT1515B.1.1.5190.000596
ORF3a15L15FttGttT1515B.1.160.320.064378
ORF3a15L15LTtgCtg1515B.1.617.10.001934
ORF3a15L15FttGttT1313B.1.5960.001133
ORF3a15L15FttGttT1313Q.10.001642
ORF3a15L15FttGttT1212B.1.1.700.004093
ORF3a15L15LTtgCtg812B.1.1770.000105
ORF3a15L15LttGttA412B.1.1770.000053
ORF3a15L15FttGttT711AY.1000.000322
ORF3a15L15FttGttC411AY.1000.000184
ORF3a15L15LttGttA1111AY.98.10.000533
ORF3a15L15FttGttT1111B.1.2340.001451
ORF3a15L15WtTgtGg1010All0.000002
ORF3a15L15StTgtCg910AY.440.000055
ORF3a15L15StTGtCA110AY.440.000006
ORF3a15L15delTTG---1010B.1.1.2140.000555
ORF3a15L15MTtgAtg1010B.1.4290.000235
ORF3a15L15delTTG---99AY.4.50.000967
ORF3a15L15LTtgCtg59B.1.10.000091
ORF3a15L15LttGttA49B.1.10.000073
ORF3a15L15FttGttT89B.1.1.2160.007124
ORF3a15L15FttGttC19B.1.1.2160.00089
ORF3a15L15FttGttT99B.1.1.2220.001836
ORF3a15L15delTTG---99B.1.1.3180.002716
ORF3a15L15FttGttT88AY.1130.001139
ORF3a15L15FttGttT88AY.46.60.000578
ORF3a15L15FttGttT88AY.60.000329
ORF3a15L15del2TTg--g58B.1.1.70.000004
ORF3a15L15del2tTGt--38B.1.1.70.000003
ORF3a15L15FttGttT88B.1.3110.002197
ORF3a15L15FttGttT88B.1.3550.088889
ORF3a15L15FttGttT58B.1.360.00073
ORF3a15L15FttGttC38B.1.360.000438
ORF3a15L15delTTG---88B.1.4290.000188
ORF3a15L15FttGttT88B.1.5640.003407
ORF3a15L15delTTG---88B.1.6230.004292
ORF3a15L15delTTG---88B.1.6300.041885
ORF3a15L15FttGttT57AY.1190.000177
ORF3a15L15FttGttC27AY.1190.000071
ORF3a15L15VTtgGtg77AY.30.00007
ORF3a15L15delTTG---77AY.430.000031
ORF3a15L15LTtgCtg67AY.430.000027
ORF3a15L15LttGttA17AY.430.000004
ORF3a15L15FttGttC47AY.460.000416
ORF3a15L15FttGttT37AY.460.000312
ORF3a15L15delTTG---77B.1.1.3170.002882
ORF3a15L15FttGttT77B.1.2210.000497
ORF3a15L15StTgtCg77B.1.258.170.000728
ORF3a15L15FttGttT77B.1.5250.000792
ORF3a15L15delTTG---77B.1.5400.067961
ORF3a15L15delTTG---77B.1.6210.00062
ORF3a15L15TTTGACC260.111111
ORF3a15L15TTTGACA260.111111
ORF3a15L15TTTgACg260.111111
ORF3a15L15FttGttT66A.2.50.002994
ORF3a15L15ITtGAtT66All0.000001
ORF3a15L15TTTGACA26All0
ORF3a15L15TTTgACg26All0
ORF3a15L15TTTGACC26All0
ORF3a15L15FttGttT66AY.1020.000159
ORF3a15L15FttGttT46AY.330.000267
ORF3a15L15FttGttC26AY.330.000134
ORF3a15L15VTtgGtg66AY.40.000009
ORF3a15L15StTgtCg66AY.40.000009
ORF3a15L15FttGttT56AY.50.000103
ORF3a15L15FttGttC16AY.50.000021
ORF3a15L15del1Ttg-tg66B0.000767
ORF3a15L15delTTG---66B.1.10.000109
ORF3a15L15MTtgAtg66B.1.1.70.000005
ORF3a15L15FttGttT56B.1.177.860.000917
ORF3a15L15FttGttC16B.1.177.860.000183
ORF3a15L15FttGttT66B.1.3810.046875
ORF3a15L15FttGttT55A.23.10.003521
ORF3a15L15FttGttC55AY.10.001979
ORF3a15L15LTtgCtg45AY.250.000024
ORF3a15L15LttGttA15AY.250.000006
ORF3a15L15delTTG---55AY.290.000079
ORF3a15L15FttGttT55AY.290.000079
ORF3a15L15FttGttT55AY.340.000485
ORF3a15L15FttGttT55AY.750.00028
ORF3a15L15LTtgCtg35B.10.000027
ORF3a15L15LttGttA25B.10.000018
ORF3a15L15VTtgGtg55B.1.10.000091
ORF3a15L15ITtGAtT55B.1.1.980.092593
ORF3a15L15delTTG---55B.1.177.350.003455
ORF3a15L15FttGttT55B.1.177.570.001405
ORF3a15L15delTTG---55B.1.177.860.000917
ORF3a15L15LTtgCtg45B.1.20.000035
ORF3a15L15LttGttA15B.1.20.000009
ORF3a15L15FttGttT45B.1.2430.000278
ORF3a15L15FttGttC15B.1.2430.00007
ORF3a15L15FttGttT45B.1.5760.003626
ORF3a15L15FttGttC15B.1.5760.000907
ORF3a15L15delTTG---55B.1.6090.002397
ORF3a15L15FttGttT45B.1.621.10.002023
ORF3a15L15FttGttC15B.1.621.10.000506
ORF3a15L15FttGttT55Q.40.002274
ORF3a15L15FttGttT44AY.220.008368
ORF3a15L15FttGttT44AY.370.001264
ORF3a15L15FttGttT24AY.450.000243
ORF3a15L15FttGttC24AY.450.000243
ORF3a15L15FttGttT44AY.540.000381
ORF3a15L15FttGttT44AY.580.00363
ORF3a15L15FttGttT44AY.90.00027
ORF3a15L15delTTG---44AY.9.20.000147
ORF3a15L15FttGttT44B0.000511
ORF3a15L15StTgtCg44B.1.10.000073
ORF3a15L15VTtgGtg44B.1.1.2220.000816
ORF3a15L15delTTG---44B.1.1.2880.007663
ORF3a15L15delTTG---44B.1.1.5230.00625
ORF3a15L15LTtgCtg44B.1.1600.000125
ORF3a15L15VTtgGtg44B.1.1770.000053
ORF3a15L15FttGttT44B.1.177.210.000306
ORF3a15L15delTTG---44B.1.177.40.000844
ORF3a15L15delTTG---44B.1.2210.000284
ORF3a15L15FttGttT44B.1.36.290.002069
ORF3a15L15del1Ttg-tg44B.1.4290.000094
ORF3a15L15FttGttT44B.1.466.20.001565
ORF3a15L15FttGttT44B.1.5880.00364
ORF3a15L15FttGttT44B.60.00364
ORF3a15L15XtTgtAg23All0
ORF3a15L15XtTGtAA13All0
ORF3a15L15delTTG---33AY.1180.000188
ORF3a15L15LTtgCtg33AY.140.000264
ORF3a15L15StTgtCg33AY.330.0002
ORF3a15L15del2TTg--g23AY.40.000003
ORF3a15L15del2tTGt--13AY.40.000002
ORF3a15L15LTtgCtg33AY.410.000882
ORF3a15L15LTtgCtg23AY.420.00008
ORF3a15L15LttGttA13AY.420.00004
ORF3a15L15FttGttC33AY.46.10.00308
ORF3a15L15StTgtCg33AY.46.60.000217
ORF3a15L15delTTG---33AY.470.000093
ORF3a15L15delTTG---33AY.50.000062
ORF3a15L15FttGttT23AY.610.00021
ORF3a15L15FttGttC13AY.610.000105
ORF3a15L15FttGttT33AY.690.00056
ORF3a15L15LttGttA23AY.90.000135
ORF3a15L15LTtgCtg13AY.90.000068
ORF3a15L15FttGttT33AY.920.000862
ORF3a15L15StTgtCg33B.10.000027
ORF3a15L15WtTgtGg33B.10.000027
ORF3a15L15FttGttT33B.1.1.3060.001315
ORF3a15L15FttGttT33B.1.1.330.001263
ORF3a15L15FttGttC33B.1.1.3690.001339
ORF3a15L15FttGttT33B.1.1.4090.008499
ORF3a15L15StTgtCg33B.1.177.540.001819
ORF3a15L15delTTG---33B.1.2580.0002
ORF3a15L15FttGttT33B.1.36.160.004274
ORF3a15L15FttGttT33B.1.36.80.003
ORF3a15L15FttGttT33B.1.3660.014634
ORF3a15L15StTgtCg33B.1.4290.000071
ORF3a15L15LTtgCtg33B.1.4710.008197
ORF3a15L15delTTG---33B.1.5060.071429
ORF3a15L15VTtgGtg33B.1.5100.078947
ORF3a15L15FttGttT33B.1.617.10.000387
ORF3a15L15StTgtCg33B.1.617.20.000011
ORF3a15L15FttGttT33B.1.6230.001609
ORF3a15L15FttGttT33B.1.6280.001057
ORF3a15L15delTTG---33B.1.6370.000219
ORF3a15L15LTtgCtg33B.1.6380.157895
ORF3a15L15FttGttT33C.370.000348
ORF3a15L15LTtgCtg23C.370.000232
ORF3a15L15LttGttA13C.370.000116
ORF3a15L15FttGttT23P.1.140.000096
ORF3a15L15FttGttC13P.1.140.000048
ORF3a15L15FttGttT33P.1.150.000697
ORF3a15L15FttGttT33Q.60.019868
ORF3a15L15MTtgAtg220.111111
ORF3a15L15HTTGCAC220.111111
ORF3a15L15FttGttT22A0.000774
ORF3a15L15FttGttT12A.20.000662
ORF3a15L15FttGttC12A.20.000662
ORF3a15L15VTtgGtg22AD.20.000438
ORF3a15L15HTTGCAC22All0
ORF3a15L15PTTGCCA12All0
ORF3a15L15PTTgCCg12All0
ORF3a15L15LTtgCtg12AY.1020.000027
ORF3a15L15LttGttA12AY.1020.000027
ORF3a15L15LttGttA22AY.1040.003968
ORF3a15L15FttGttT22AY.1060.00067
ORF3a15L15delTTG---22AY.1110.000366
ORF3a15L15FttGttC12AY.1160.000287
ORF3a15L15FttGttT12AY.1160.000287
ORF3a15L15FttGttT22AY.1170.000169
ORF3a15L15del1Ttg-tg22AY.1170.000169
ORF3a15L15FttGttT22AY.1210.000271
ORF3a15L15FttGttT12AY.16.10.00047
ORF3a15L15FttGttC12AY.16.10.00047
ORF3a15L15FttGttC22AY.230.000139
ORF3a15L15delTTG---22AY.270.000129
ORF3a15L15StTgtCg22AY.30.00002
ORF3a15L15del1ttGtt-12AY.40.000002
ORF3a15L15del1Ttg-tg12AY.40.000002
ORF3a15L15LTtgCtg22AY.4.20.000043
ORF3a15L15LTtgCtg22AY.4.40.000818
ORF3a15L15FttGttT22AY.420.00008
ORF3a15L15LTtgCtg22AY.450.000243
ORF3a15L15VTtgGtg22AY.46.50.000397
ORF3a15L15StTgtCg22AY.470.000062
ORF3a15L15LTtgCtg22AY.60.000082
ORF3a15L15delTTG---22AY.60.000082
ORF3a15L15FttGttC22AY.650.001066
ORF3a15L15FttGttT22AY.7.10.000225
ORF3a15L15delTTG---22AY.710.00095
ORF3a15L15delTTG---22AY.760.009662
ORF3a15L15FttGttT22AY.98.10.000097
ORF3a15L15delTTG---22AY.98.10.000097
ORF3a15L15VTtgGtg22B.1.1.1330.016949
ORF3a15L15delTTG---22B.1.1.1890.003026
ORF3a15L15FttGttT22B.1.1.1920.004619
ORF3a15L15FttGttT22B.1.1.2910.001485
ORF3a15L15FttGttT22B.1.1.3180.000604
ORF3a15L15FttGttT22B.1.1.3720.001377
ORF3a15L15LTtgCtg22B.1.1.570.022989
ORF3a15L15WtTgtGg22B.1.1.70.000002
ORF3a15L15delTTG---22B.1.177.100.001756
ORF3a15L15delTTG---22B.1.177.120.000303
ORF3a15L15delTTG---22B.1.177.600.000437
ORF3a15L15StTgtCg22B.1.177.600.000437
ORF3a15L15FttGttT22B.1.177.820.000955
ORF3a15L15delTTG---22B.1.177.830.002963
ORF3a15L15del2TTg--g22B.1.20.000018
ORF3a15L15FttGttC12B.1.214.20.0006
ORF3a15L15FttGttT12B.1.214.20.0006
ORF3a15L15VTtgGtg22B.1.2340.000264
ORF3a15L15FttGttT22B.1.2400.000431
ORF3a15L15LTtgCtg12B.1.258.140.00098
ORF3a15L15LttGttA12B.1.258.140.00098
ORF3a15L15delTTG---22B.1.258.30.00335
ORF3a15L15delTTG---22B.1.3510.000059
ORF3a15L15FttGttT22B.1.3890.002004
ORF3a15L15FttGttT22B.1.4220.001625
ORF3a15L15delTTG---22B.1.4270.000101
ORF3a15L15delTTG---22B.1.5250.000226
ORF3a15L15FttGttT22B.1.5580.009132
ORF3a15L15VTtgGtg22B.1.617.20.000008
ORF3a15L15del2TTg--g22B.1.6210.000177
ORF3a15L15StTgtCg22P.10.000032
ORF3a15L15delTTG---22P.1.90.009615
ORF3a15L15FttGttT22P.20.000373
ORF3a15L15delTTG---22R.10.00018
ORF3a15L15delTTG---22U.30.007722
ORF3a15L15LttGttA11A.20.000662
ORF3a15L15delTTG---11A.2.50.000499
ORF3a15L15FttGttT11A.270.001656
ORF3a15L15FttGttC11AE.20.058824
ORF3a15L15LTtgCtg11AH.30.003802
ORF3a15L15FttGttT11AL.10.012987
ORF3a15L15delTTG---11AY.1020.000027
ORF3a15L15XtTGtAA11AY.1030.000006
ORF3a15L15del1Ttg-tg11AY.1030.000006
ORF3a15L15del2tTGt--11AY.1030.000006
ORF3a15L15delTTG---11AY.1050.000643
ORF3a15L15FttGttT11AY.1100.000113
ORF3a15L15delTTG---11AY.1170.000085
ORF3a15L15delTTG---11AY.1190.000035
ORF3a15L15LTtgCtg11AY.1200.000037
ORF3a15L15del1ttGtt-11AY.1200.000037
ORF3a15L15FttGttT11AY.140.000088
ORF3a15L15delTTG---11AY.140.000088
ORF3a15L15StTgtCg11AY.140.000088
ORF3a15L15FttGttT11AY.160.00038
ORF3a15L15delTTG---11AY.200.000039
ORF3a15L15delTTG---11AY.230.00007
ORF3a15L15StTgtCg11AY.250.000006
ORF3a15L15LttGttA11AY.260.000028
ORF3a15L15StTgtCg11AY.260.000028
ORF3a15L15delTTG---11AY.260.000028
ORF3a15L15FttGttC11AY.270.000065
ORF3a15L15StTgtCg11AY.290.000016
ORF3a15L15LttGttA11AY.30.00001
ORF3a15L15delTTG---11AY.30.00001
ORF3a15L15del1Ttg-tg11AY.30.00001
ORF3a15L15del2TTg--g11AY.3.10.000085
ORF3a15L15del1Ttg-tg11AY.3.10.000085
ORF3a15L15delTTG---11AY.3.10.000085
ORF3a15L15FttGttT11AY.300.000396
ORF3a15L15delTTG---11AY.330.000067
ORF3a15L15FttGttT11AY.350.000233
ORF3a15L15LttGttA11AY.350.000233
ORF3a15L15FttGttT11AY.360.000148
ORF3a15L15LttGttA11AY.370.000316
ORF3a15L15delTTG---11AY.390.000025
ORF3a15L15delTTG---11AY.39.10.00004
ORF3a15L15del1Ttg-tg11AY.39.10.00004
ORF3a15L15FttGttT11AY.39.10.00004
ORF3a15L15FttGttT11AY.4.20.000022
ORF3a15L15LTtgCtg11AY.4.2.10.000149
ORF3a15L15FttGttC11AY.4.50.000107
ORF3a15L15FttGttC11AY.400.000964
ORF3a15L15del2TTg--g11AY.410.000294
ORF3a15L15VTtgGtg11AY.430.000004
ORF3a15L15PTTGCCA11AY.430.000004
ORF3a15L15StTgtCg11AY.430.000004
ORF3a15L15WtTgtGg11AY.440.000006
ORF3a15L15delTTG---11AY.46.20.000635
ORF3a15L15FttGttT11AY.46.30.000934
ORF3a15L15FttGttT11AY.46.40.000165
ORF3a15L15LttGttA11AY.470.000031
ORF3a15L15LTtgCtg11AY.490.003195
ORF3a15L15del2TTg--g11AY.50.000021
ORF3a15L15del1ttGtt-11AY.50.000021
ORF3a15L15StTgtCg11AY.50.000021
ORF3a15L15FttGttT11AY.5.40.000277
ORF3a15L15delTTG---11AY.5.40.000277
ORF3a15L15FttGttC11AY.590.00053
ORF3a15L15delTTG---11AY.600.000938
ORF3a15L15StTgtCg11AY.610.000105
ORF3a15L15FttGttT11AY.630.000387
ORF3a15L15FttGttT11AY.640.000595
ORF3a15L15LttGttA11AY.690.000187
ORF3a15L15del1Ttg-tg11AY.810.001992
ORF3a15L15LttGttA11AY.880.000884
ORF3a15L15del1ttGtt-11AY.90.000068
ORF3a15L15FttGttT11AY.9.20.000037
ORF3a15L15FttGttT11AY.950.000761
ORF3a15L15FttGttC11AY.960.002075
ORF3a15L15StTgtCg11AY.980.000079
ORF3a15L15FttGttT11AY.980.000079
ORF3a15L15delTTG---11AY.980.000079
ORF3a15L15WtTgtGg11AY.98.10.000048
ORF3a15L15FttGttT11AY.990.001049
ORF3a15L15delTTG---11AY.990.001049
ORF3a15L15FttGttT11AY.99.20.000092
ORF3a15L15FttGttT11AZ.10.000867
ORF3a15L15LttGttA11AZ.20.000821
ORF3a15L15delTTG---11B0.000128
ORF3a15L15del1Ttg-tg11B.10.000009
ORF3a15L15XtTgtAg11B.10.000009
ORF3a15L15XtTgtAg11B.1.10.000018
ORF3a15L15FttGttT11B.1.1.10.000327
ORF3a15L15delTTG---11B.1.1.1330.008475
ORF3a15L15FttGttT11B.1.1.1380.006061
ORF3a15L15FttGttT11B.1.1.1570.000913
ORF3a15L15FttGttC11B.1.1.1700.001247
ORF3a15L15FttGttT11B.1.1.1760.000439
ORF3a15L15StTgtCg11B.1.1.1980.001468
ORF3a15L15LTtgCtg11B.1.1.2140.000055
ORF3a15L15LTtgCtg11B.1.1.2160.00089
ORF3a15L15MTtgAtg11B.1.1.2200.001859
ORF3a15L15VTtgGtg11B.1.1.2200.001859
ORF3a15L15del1Ttg-tg11B.1.1.2220.000204
ORF3a15L15delTTG---11B.1.1.2340.012048
ORF3a15L15delTTG---11B.1.1.2360.006897
ORF3a15L15FttGttC11B.1.1.250.000569
ORF3a15L15FttGttT11B.1.1.2690.001353
ORF3a15L15FttGttT11B.1.1.280.000311
ORF3a15L15delTTG---11B.1.1.280.000311
ORF3a15L15LttGttA11B.1.1.280.000311
ORF3a15L15FttGttT11B.1.1.2840.000107
ORF3a15L15del1Ttg-tg11B.1.1.3010.001179
ORF3a15L15LTtgCtg11B.1.1.3180.000302
ORF3a15L15FttGttT11B.1.1.3260.001761
ORF3a15L15delTTG---11B.1.1.3510.002793
ORF3a15L15delTTG---11B.1.1.3690.000446
ORF3a15L15delTTG---11B.1.1.370.000193
ORF3a15L15delTTG---11B.1.1.390.00051
ORF3a15L15FttGttT11B.1.1.390.00051
ORF3a15L15FttGttT11B.1.1.4060.006494
ORF3a15L15delTTG---11B.1.1.4090.002833
ORF3a15L15delTTG---11B.1.1.4320.001266
ORF3a15L15VTtgGtg11B.1.1.4860.001577
ORF3a15L15LTtgCtg11B.1.1.500.000679
ORF3a15L15ITtGAtT11B.1.1.520.012195
ORF3a15L15FttGttT11B.1.1.540.003021
ORF3a15L15delTTG---11B.1.1.550.012987
ORF3a15L15LttGttA11B.1.1.630.000386
ORF3a15L15PTTgCCg11B.1.1.70.000001
ORF3a15L15FttGttT11B.1.1.80.003584
ORF3a15L15delTTG---11B.1.1.980.018519
ORF3a15L15FttGttT11B.1.1110.001175
ORF3a15L15delTTG---11B.1.1280.000635
ORF3a15L15delTTG---11B.1.1420.002899
ORF3a15L15FttGttT11B.1.1470.000756
ORF3a15L15FttGttT11B.1.160.140.002119
ORF3a15L15delTTG---11B.1.160.160.000929
ORF3a15L15delTTG---11B.1.160.230.004831
ORF3a15L15delTTG---11B.1.160.260.002421
ORF3a15L15del1ttGtt-11B.1.1770.000013
ORF3a15L15MTtgAtg11B.1.1770.000013
ORF3a15L15del2TTg--g11B.1.1770.000013
ORF3a15L15delTTG---11B.1.177.190.001431
ORF3a15L15FttGttT11B.1.177.540.000606
ORF3a15L15FttGttT11B.1.177.560.000668
ORF3a15L15StTgtCg11B.1.177.560.000668
ORF3a15L15delTTG---11B.1.177.570.000281
ORF3a15L15delTTG---11B.1.177.580.001332
ORF3a15L15del1ttGtt-11B.1.177.60.000977
ORF3a15L15FttGttT11B.1.177.600.000218
ORF3a15L15delTTG---11B.1.177.690.001484
ORF3a15L15del1ttGtt-11B.1.177.70.000165
ORF3a15L15LttGttA11B.1.177.70.000165
ORF3a15L15FttGttT11B.1.177.70.000165
ORF3a15L15delTTG---11B.1.177.760.002494
ORF3a15L15FttGttT11B.1.177.810.000189
ORF3a15L15delTTG---11B.1.1950.005025
ORF3a15L15del1Ttg-tg11B.1.20.000009
ORF3a15L15WtTgtGg11B.1.20.000009
ORF3a15L15VTtgGtg11B.1.20.000009
ORF3a15L15delTTG---11B.1.221.10.002907
ORF3a15L15FttGttT11B.1.2230.002778
ORF3a15L15FttGttT11B.1.2390.001221
ORF3a15L15StTgtCg11B.1.2400.000216
ORF3a15L15FttGttT11B.1.2410.000812
ORF3a15L15del1Ttg-tg11B.1.2430.00007
ORF3a15L15VTtgGtg11B.1.2430.00007
ORF3a15L15LttGttA11B.1.2580.000067
ORF3a15L15del1Ttg-tg11B.1.258.170.000104
ORF3a15L15FttGttT11B.1.258.170.000104
ORF3a15L15FttGttT11B.1.2600.003344
ORF3a15L15FttGttT11B.1.2670.018519
ORF3a15L15FttGttT11B.1.3010.005917
ORF3a15L15FttGttT11B.1.3020.013333
ORF3a15L15LttGttA11B.1.3110.000275
ORF3a15L15FttGttT11B.1.3240.001605
ORF3a15L15FttGttT11B.1.3490.000715
ORF3a15L15del1Ttg-tg11B.1.3510.00003
ORF3a15L15LTtgCtg11B.1.3510.00003
ORF3a15L15FttGttT11B.1.36.100.004785
ORF3a15L15del2tTGt--11B.1.36.170.000494
ORF3a15L15delTTG---11B.1.36.180.00042
ORF3a15L15FttGttC11B.1.36.180.00042
ORF3a15L15VTtgGtg11B.1.36.180.00042
ORF3a15L15FttGttT11B.1.36.220.001208
ORF3a15L15FttGttT11B.1.36.380.001642
ORF3a15L15delTTG---11B.1.3630.012987
ORF3a15L15LTtgCtg11B.1.3660.004878
ORF3a15L15FttGttT11B.1.3670.000792
ORF3a15L15LTtgCtg11B.1.3670.000792
ORF3a15L15delTTG---11B.1.3690.000285
ORF3a15L15VTtgGtg11B.1.3690.000285
ORF3a15L15FttGttC11B.1.3710.001122
ORF3a15L15FttGttT11B.1.3750.00082
ORF3a15L15FttGttT11B.1.3930.028571
ORF3a15L15LTtgCtg11B.1.4000.000429
ORF3a15L15delTTG---11B.1.4080.00369
ORF3a15L15delTTG---11B.1.4090.000781
ORF3a15L15delTTG---11B.1.4220.000812
ORF3a15L15LTtgCtg11B.1.4290.000024
ORF3a15L15FttGttT11B.1.4620.007246
ORF3a15L15FttGttT11B.1.5030.002488
ORF3a15L15FttGttT11B.1.5160.001957
ORF3a15L15FttGttT11B.1.5170.000427
ORF3a15L15delTTG---11B.1.5260.000024
ORF3a15L15LttGttA11B.1.5260.000024
ORF3a15L15FttGttT11B.1.5400.009709
ORF3a15L15FttGttT11B.1.5610.000397
ORF3a15L15FttGttT11B.1.5680.001111
ORF3a15L15delTTG---11B.1.5770.000687
ORF3a15L15VTtgGtg11B.1.5820.000491
ORF3a15L15FttGttT11B.1.5950.000261
ORF3a15L15WtTgtGg11B.1.5950.000261
ORF3a15L15delTTG---11B.1.5950.000261
ORF3a15L15StTgtCg11B.1.5960.000087
ORF3a15L15WtTgtGg11B.1.617.20.000004
ORF3a15L15FttGttT11B.1.6190.000871
ORF3a15L15FttGttT11B.1.6200.000946
ORF3a15L15del1ttGtt-11B.1.6210.000089
ORF3a15L15LTtgCtg11B.1.6230.000536
ORF3a15L15delTTG---11B.1.6280.000352
ORF3a15L15delTTG---11B.1.6380.052632
ORF3a15L15delTTG---11B.3.10.001658
ORF3a15L15FttGttT11B.380.02381
ORF3a15L15FttGttC11C.160.00106
ORF3a15L15LTtgCtg11C.300.001727
ORF3a15L15del1Ttg-tg11C.36.30.000567
ORF3a15L15del1Ttg-tg11C.370.000116
ORF3a15L15FttGttT11C.40.01
ORF3a15L15delTTG---11D.20.000075
ORF3a15L15FttGttC11N.50.001767
ORF3a15L15FttGttT11N.90.005952
ORF3a15L15LTtgCtg11P.10.000016
ORF3a15L15VTtgGtg11P.10.000016
ORF3a15L15FttGttT11P.1.100.000269
ORF3a15L15FttGttT11P.1.120.000484
ORF3a15L15VTtgGtg11P.1.140.000048
ORF3a15L15delTTG---11P.1.150.000232
ORF3a15L15VTtgGtg11P.1.160.000374
ORF3a15L15FttGttT11P.1.160.000374
ORF3a15L15FttGttT11P.1.20.001156
ORF3a15L15del1Ttg-tg11P.1.40.000977
ORF3a15L15delTTG---11P.20.000187
ORF3a15L15FttGttT11P.40.003802
ORF3a15L15delTTG---11Q.40.000455
ORF3a15L15VTtgGtg11Q.80.000165
ORF3a15L15LTtgCtg11Q.80.000165
ORF3a15L15delTTG---11Q.80.000165
ORF3a15L15FttGttT11U.30.003861
ORF3a15L15FttGttT11Z.10.00289