CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 148 & Codon = Agc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a148C148SnonsynTgcAgc71450.63380325834-25836

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a148C148STgcAgc4571All0.000009
ORF3a148C148STgcAgc1112B.1.1.70.00001
ORF3a148C148STgcAgc88AY.40.000012
ORF3a148C148STgcAgc44AY.1030.000025
ORF3a148C148STgcAgc220.111111
ORF3a148C148STgcAgc22AY.1090.001479
ORF3a148C148STgcAgc12AY.4.20.000022
ORF3a148C148STgcAgc12B.10.000009
ORF3a148C148STgcAgc11AY.1180.000063
ORF3a148C148STgcAgc11AY.250.000006
ORF3a148C148STgcAgc11AY.30.00001
ORF3a148C148STgcAgc11AY.610.000105
ORF3a148C148STgcAgc11AY.740.000116
ORF3a148C148STgcAgc11B.1.1.2910.000742
ORF3a148C148STgcAgc11B.1.1.950.019608
ORF3a148C148STgcAgc11B.1.177.600.000218
ORF3a148C148STgcAgc11B.1.177.860.000183
ORF3a148C148STgcAgc11B.1.20.000009
ORF3a148C148STgcAgc11B.1.2210.000071
ORF3a148C148STgcAgc11B.1.2360.002053
ORF3a148C148STgcAgc11B.1.4290.000024
ORF3a148C148STgcAgc11B.1.5260.000024
ORF3a148C148STgcAgc11B.1.5900.004545
ORF3a148C148STgcAgc11B.310.003731