CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 143 & Codon = gTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a143A143VnonsyngCcgTc6666640.99699725819-25821

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a143A143VgCcgTc664666All0.000127
ORF3a143A143VgCcgTc104105B.1.1.70.000093
ORF3a143A143VgCcgTc8686B.1.4290.002023
ORF3a143A143VgCcgTc8282AY.250.000493
ORF3a143A143VgCcgTc6464B.1.3510.001902
ORF3a143A143VgCcgTc5454AY.390.001334
ORF3a143A143VgCcgTc4040AY.40.000062
ORF3a143A143VgCcgTc3030AE.50.555556
ORF3a143A143VgCcgTc3030AY.1030.000186
ORF3a143A143VgCcgTc2626B.1.617.20.000098
ORF3a143A143VgCcgTc1414B.1.20.000123
ORF3a143A143VgCcgTc1212B.1.10.000218
ORF3a143A143VgCcgTc77AY.30.00007
ORF3a143A143VgCcgTc66AY.430.000027
ORF3a143A143VgCcgTc66B.1.1.3170.00247
ORF3a143A143VgCcgTc66Q.30.00087
ORF3a143A143VgCcgTc55AY.350.001165
ORF3a143A143VgCcgTc55AY.4.20.000108
ORF3a143A143VgCcgTc55AY.50.000103
ORF3a143A143VgCcgTc55B.1.2320.002687
ORF3a143A143VgCcgTc44AZ.10.003469
ORF3a143A143VgCcgTc33AY.3.10.000256
ORF3a143A143VgCcgTc33AY.440.000018
ORF3a143A143VgCcgTc33B.10.000027
ORF3a143A143VgCcgTc33B.1.177.450.001144
ORF3a143A143VgCcgTc33B.1.5240.004219
ORF3a143A143VgCcgTc33P.10.000047
ORF3a143A143VgCcgTc22AY.1020.000053
ORF3a143A143VgCcgTc22AY.260.000057
ORF3a143A143VgCcgTc22AY.330.000134
ORF3a143A143VgCcgTc22AY.4.40.000818
ORF3a143A143VgCcgTc22AY.5.30.000675
ORF3a143A143VgCcgTc22AY.750.000112
ORF3a143A143VgCcgTc22AY.920.000575
ORF3a143A143VgCcgTc22B.1.1.3250.051282
ORF3a143A143VgCcgTc22B.1.1.700.000682
ORF3a143A143VgCcgTc22C.360.001821
ORF3a143A143VgCcgTc11AU.30.00211
ORF3a143A143VgCcgTc11AY.1000.000046
ORF3a143A143VgCcgTc11AY.1080.001103
ORF3a143A143VgCcgTc11AY.1170.000085
ORF3a143A143VgCcgTc11AY.200.000039
ORF3a143A143VgCcgTc11AY.230.00007
ORF3a143A143VgCcgTc11AY.460.000104
ORF3a143A143VgCcgTc11AY.46.30.000934
ORF3a143A143VgCcgTc11AY.46.60.000072
ORF3a143A143VgCcgTc11AY.470.000031
ORF3a143A143VgCcgTc11AY.820.001357
ORF3a143A143VgCcgTc11AY.90.000068
ORF3a143A143VgCcgTc11AY.9.10.000084
ORF3a143A143VgCcgTc11AY.900.000684
ORF3a143A143VgCcgTc11AY.99.20.000092
ORF3a143A143VgCcgTc11B.1.1.10.000327
ORF3a143A143VgCcgTc11B.1.1.2140.000055
ORF3a143A143VgCcgTc11B.1.1.250.000569
ORF3a143A143VgCcgTc11B.1.1.2510.007937
ORF3a143A143VgCcgTc11B.1.1.2690.001353
ORF3a143A143VgCcgTc11B.1.1.280.000311
ORF3a143A143VgCcgTc11B.1.1.2940.001266
ORF3a143A143VgCcgTc11B.1.1.3260.001761
ORF3a143A143VgCcgTc11B.1.1.4340.000349
ORF3a143A143VgCcgTc11B.1.1470.000756
ORF3a143A143VgCcgTc11B.1.1770.000013
ORF3a143A143VgCcgTc11B.1.2580.000067
ORF3a143A143VgCcgTc11B.1.4990.00105
ORF3a143A143VgCcgTc11B.1.5260.000024
ORF3a143A143VgCcgTc11B.1.5650.00081
ORF3a143A143VgCcgTc11B.1.5960.000087
ORF3a143A143VgCcgTc11B.1.617.10.000129
ORF3a143A143VgCcgTc11D.20.000075
ORF3a143A143VgCcgTc11Q.40.000455
ORF3a143A143VgCcgTc11Q.80.000165