CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 135 & Codon = tcA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a135S135SsyntcCtcA26331300.049373325795-25797

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a135S135StcCtcA1302633All0.000025
ORF3a135S135StcCtcA16524B.1.1.70.000014
ORF3a135S135StcCtcA14252AY.40.000022
ORF3a135S135StcCtcA1145AY.30.00001
ORF3a135S135StcCtcA493B.1.617.20.000015
ORF3a135S135StcCtcA271AY.1030.000012
ORF3a135S135StcCtcA470AY.430.000018
ORF3a135S135StcCtcA164B.1.10.000018
ORF3a135S135StcCtcA544AY.4.20.000108
ORF3a135S135StcCtcA440B.1.20.000035
ORF3a135S135StcCtcA136AY.1020.000027
ORF3a135S135StcCtcA732B.10.000064
ORF3a135S135StcCtcA430B.1.3490.002859
ORF3a135S135StcCtcA128AY.390.000025
ORF3a135S135StcCtcA227AY.250.000012
ORF3a135S135StcCtcA319AY.440.000018
ORF3a135S135StcCtcA119B.1.4270.00005
ORF3a135S135StcCtcA1416B.1.360.002043
ORF3a135S135StcCtcA513AY.290.000079
ORF3a135S135StcCtcA612AY.1000.000276
ORF3a135S135StcCtcA610B.1.1770.000079
ORF3a135S135StcCtcA17AY.450.000122
ORF3a135S135StcCtcA26D.20.00015
ORF3a135S135StcCtcA25AY.980.000158
ORF3a135S135StcCtcA15B.1.1.700.000341
ORF3a135S135StcCtcA14AY.3.10.000085
ORF3a135S135StcCtcA14AY.60.000041
ORF3a135S135StcCtcA24AY.99.20.000184
ORF3a135S135StcCtcA23AY.230.000139
ORF3a135S135StcCtcA22B.1.5680.002222
ORF3a135S135StcCtcA11AY.1100.000113
ORF3a135S135StcCtcA11AY.29.10.000221
ORF3a135S135StcCtcA11AY.7.10.000113
ORF3a135S135StcCtcA11B.1.1.1610.003534
ORF3a135S135StcCtcA11B.1.1570.002985
ORF3a135S135StcCtcA11B.1.160.160.000929
ORF3a135S135StcCtcA11B.1.177.210.000076
ORF3a135S135StcCtcA11B.1.3110.000275
ORF3a135S135StcCtcA11B.1.3330.010526
ORF3a135S135StcCtcA11B.1.4230.010204
ORF3a135S135StcCtcA11B.1.5090.000866
ORF3a135S135StcCtcA11B.1.5170.000427
ORF3a135S135StcCtcA11B.1.6230.000536
ORF3a135S135StcCtcA11B.4.50.011905
ORF3a135S135StcCtcA11B.400.000364