CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 108

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a108L108FnonsynCttTtt10373103720.99990425714-25716
ORF3a108L108FnonsynCtTTtC1037310.000096404125714-25716
ORF3a108L108deldelCTT---472472125714-25716
ORF3a108L108InonsynCttAtt2262240.9911525714-25716
ORF3a108L108InonsynCtTAtC22620.0088495625714-25716
ORF3a108L108LsynctTctC2041810.88725525714-25716
ORF3a108L108LsynctTctG204100.049019625714-25716
ORF3a108L108LsynctTctA204100.049019625714-25716
ORF3a108L108LsynCtTTtA20420.0098039225714-25716
ORF3a108L108LsynCtTTtG20410.0049019625714-25716
ORF3a108L108PnonsyncTtcCt163163125714-25716
ORF3a108L108HnonsyncTtcAt123123125714-25716
ORF3a108L108VnonsynCttGtt9696125714-25716
ORF3a108L108del1delcTtc-t1680.525714-25716
ORF3a108L108del1delCtt-tt1680.525714-25716
ORF3a108L108RnonsyncTtcGt1111125714-25716
ORF3a108L108del2delCTt--t630.525714-25716
ORF3a108L108del2delcTTc--620.33333325714-25716
ORF3a108L108del2delCTT--N610.16666725714-25716
ORF3a108L108SnonsynCTtTCt530.625714-25716
ORF3a108L108SnonsynCTtAGt520.425714-25716
ORF3a108L108NnonsynCTtAAt11125714-25716
ORF3a108L108AnonsynCTtGCt11125714-25716
ORF3a108L108GnonsynCTtGGt11125714-25716
ORF3a108L108DnonsynCTtGAt11125714-25716
ORF3a108L108QnonsyncTTcAA11125714-25716

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a108L108FCttTtt1037210373All0.001984
ORF3a108L108FCtTTtC110373All0
ORF3a108L108FCttTtt14381438AY.250.008649
ORF3a108L108FCttTtt12841284B.1.1.70.001149
ORF3a108L108FCttTtt12611261B.1.4090.985156
ORF3a108L108FCttTtt879879B.1.4000.377091
ORF3a108L108FCttTtt530530AY.40.000825
ORF3a108L108delCTT---472472All0.00009
ORF3a108L108FCttTtt349349B.1.617.20.001314
ORF3a108L108FCttTtt312312B.1.1.3690.139224
ORF3a108L108FCttTtt259259AY.260.007332
ORF3a108L108FCttTtt234234AY.440.001424
ORF3a108L108FCttTtt233233AY.50.004811
ORF3a108L108ICttAtt224226All0.000043
ORF3a108L108ICtTAtC2226All0
ORF3a108L108FCttTtt222222AY.46.40.036519
ORF3a108L108LctTctC181204All0.000035
ORF3a108L108LctTctA10204All0.000002
ORF3a108L108LctTctG10204All0.000002
ORF3a108L108LCtTTtA2204All0
ORF3a108L108LCtTTtG1204All0
ORF3a108L108FCttTtt201201AY.30.001999
ORF3a108L108FCttTtt167167B.1.1770.002199
ORF3a108L108PcTtcCt163163All0.000031
ORF3a108L108FCttTtt146146AY.330.00975
ORF3a108L108FCttTtt146146B.10.001337
ORF3a108L108FCttTtt141141AY.430.000625
ORF3a108L108FCttTtt139139B.1.20.001224
ORF3a108L108delCTT---127127B.1.1.70.000114
ORF3a108L108FCttTtt125125P.10.001969
ORF3a108L108HcTtcAt123123All0.000024
ORF3a108L108FCttTtt121121B.1.10.002195
ORF3a108L108FCttTtt116116AY.1030.00072
ORF3a108L108HcTtcAt111111B.1.1.70.000099
ORF3a108L108VCttGtt9696All0.000018
ORF3a108L108LctTctC8888AY.30.000875
ORF3a108L108FCttTtt7575B.1.5770.051546
ORF3a108L108FCttTtt6666B.1.4290.001553
ORF3a108L108FCttTtt6363A.2.30.298578
ORF3a108L108FCttTtt5858AY.390.001433
ORF3a108L108delCTT---5353AY.40.000082
ORF3a108L108FCttTtt5353AY.9.10.004437
ORF3a108L108FCttTtt5353B.1.1.2220.010812
ORF3a108L108PcTtcCt4646Q.10.005811
ORF3a108L108FCttTtt4444AY.98.10.002131
ORF3a108L108ICttAtt4444B.1.1770.000579
ORF3a108L108VCttGtt4343B.1.1.2140.002385
ORF3a108L108FCttTtt4343B.1.2430.002992
ORF3a108L108FCttTtt4242AY.1020.001114
ORF3a108L108delCTT---3939AY.1030.000242
ORF3a108L108FCttTtt3939B.1.1.5190.001549
ORF3a108L108FCttTtt3737AY.1200.001376
ORF3a108L108FCttTtt3333AY.1000.001518
ORF3a108L108FCttTtt3232B.1.1.2140.001775
ORF3a108L108FCttTtt2929AY.200.001127
ORF3a108L108FCttTtt2929B.1.5250.003282
ORF3a108L108ICttAtt2828AY.430.000124
ORF3a108L108ICttAtt2727B.1.20.000238
ORF3a108L108ICttAtt2626AY.390.000642
ORF3a108L108FCttTtt2525AY.4.20.000542
ORF3a108L108FCttTtt2525B.1.4270.001262
ORF3a108L108FCttTtt2424AY.650.012793
ORF3a108L108ICttAtt2424B.1.1.70.000021
ORF3a108L108FCttTtt2424B.1.360.003502
ORF3a108L108FCttTtt2424B.1.5170.010248
ORF3a108L108ICttAtt2222AY.1030.000137
ORF3a108L108FCttTtt2222AY.470.000684
ORF3a108L108FCttTtt2222R.10.00198
ORF3a108L108delCTT---2121AY.330.001402
ORF3a108L108FCttTtt2020AY.460.002082
ORF3a108L108delCTT---2020B.1.1770.000263
ORF3a108L108FCttTtt2020P.1.140.000956
ORF3a108L108FCttTtt1919AY.420.000764
ORF3a108L108FCttTtt1919AY.610.001991
ORF3a108L108FCttTtt1919B.1.177.210.001453
ORF3a108L108FCttTtt1919B.1.438.10.002038
ORF3a108L108FCttTtt1919B.1.617.10.00245
ORF3a108L108FCttTtt1919C.370.002205
ORF3a108L108FCttTtt1919Q.10.0024
ORF3a108L108FCttTtt1818AY.4.50.001935
ORF3a108L108LctTctC1418B.1.1.70.000013
ORF3a108L108LctTctG418B.1.1.70.000004
ORF3a108L108FCttTtt1818B.1.6210.001593
ORF3a108L108FCttTtt1717AY.290.000268
ORF3a108L108FCttTtt1717AY.980.001343
ORF3a108L108FCttTtt1717B.1.1.3180.00513
ORF3a108L108FCttTtt1717B.1.1600.00053
ORF3a108L108FCttTtt1717B.1.5750.005158
ORF3a108L108PcTtcCt1717B.1.617.20.000064
ORF3a108L108del1cTtc-t816All0.000002
ORF3a108L108del1Ctt-tt816All0.000002
ORF3a108L108delCTT---1616AY.430.000071
ORF3a108L108FCttTtt1515AY.10.005936
ORF3a108L108delCTT---1515AY.250.00009
ORF3a108L108FCttTtt1515B.1.3510.000446
ORF3a108L108FCttTtt1515B.1.5960.001307
ORF3a108L108FCttTtt1414AY.1180.000877
ORF3a108L108delCTT---1414AY.300.00554
ORF3a108L108LctTctC1414AY.430.000062
ORF3a108L108FCttTtt1414B.1.2580.000932
ORF3a108L108FCttTtt1313AY.1190.000459
ORF3a108L108FCttTtt1313AY.7.10.001465
ORF3a108L108FCttTtt1313AY.99.20.001198
ORF3a108L108delCTT---1313B.10.000119
ORF3a108L108FCttTtt1212AY.1060.004019
ORF3a108L108FCttTtt1212AY.1170.001014
ORF3a108L108FCttTtt1212AY.450.00146
ORF3a108L108FCttTtt1212B.1.1.280.003735
ORF3a108L108FCttTtt1212B.1.258.30.020101
ORF3a108L108FCttTtt1212B.1.564.10.018927
ORF3a108L108FCttTtt1212P.1.70.003831
ORF3a108L108RcTtcGt1111All0.000002
ORF3a108L108PcTtcCt1111AY.40.000017
ORF3a108L108PcTtcCt1111AY.430.000049
ORF3a108L108FCttTtt1111AY.46.50.002183
ORF3a108L108FCttTtt1111B.1.1.2840.001181
ORF3a108L108FCttTtt1111B.1.1.3110.00394
ORF3a108L108FCttTtt1111B.1.2340.001451
ORF3a108L108FCttTtt1010AY.270.000647
ORF3a108L108FCttTtt1010AY.340.00097
ORF3a108L108FCttTtt1010AY.750.00056
ORF3a108L108FCttTtt1010B.1.2800.071429
ORF3a108L108FCttTtt1010D.20.00075
ORF3a108L108PcTtcCt1010P.10.000158
ORF3a108L108FCttTtt99AY.120.002845
ORF3a108L108FCttTtt99AY.230.000628
ORF3a108L108FCttTtt99AY.300.003562
ORF3a108L108FCttTtt99AY.320.004792
ORF3a108L108LctTctC89AY.40.000012
ORF3a108L108LctTctG19AY.40.000002
ORF3a108L108delCTT---99AY.670.004178
ORF3a108L108FCttTtt99B.1.1.5250.04918
ORF3a108L108FCttTtt99B.1.177.120.001365
ORF3a108L108delCTT---99C.370.001045
ORF3a108L108LCtTTtA280.111111
ORF3a108L108LctTctA280.111111
ORF3a108L108LctTctC280.111111
ORF3a108L108LctTctG180.055556
ORF3a108L108LCtTTtG180.055556
ORF3a108L108VCttGtt88AY.4.20.000174
ORF3a108L108FCttTtt88AY.940.003541
ORF3a108L108FCttTtt88AY.950.006088
ORF3a108L108FCttTtt88B.1.1.250.004548
ORF3a108L108PcTtcCt88B.1.1.70.000007
ORF3a108L108VCttGtt88B.1.1600.00025
ORF3a108L108FCttTtt88B.1.2210.000568
ORF3a108L108FCttTtt88B.1.3360.019512
ORF3a108L108FCttTtt88B.1.36.310.014011
ORF3a108L108FCttTtt88B.1.4110.02963
ORF3a108L108delCTT---88B.1.617.20.00003
ORF3a108L108FCttTtt77AY.1080.007718
ORF3a108L108FCttTtt77AY.1110.001282
ORF3a108L108delCTT---77AY.290.00011
ORF3a108L108FCttTtt77AY.540.000667
ORF3a108L108VCttGtt77B.1.10.000127
ORF3a108L108FCttTtt77B.1.1.2650.022082
ORF3a108L108FCttTtt77B.1.160.160.006506
ORF3a108L108FCttTtt77B.1.177.160.004651
ORF3a108L108FCttTtt77B.1.4480.018373
ORF3a108L108FCttTtt77P.1.10.002224
ORF3a108L108FCttTtt77P.1.160.002619
ORF3a108L108del2CTt--t36All0.000001
ORF3a108L108del2cTTc--26All0
ORF3a108L108del2CTT--N16All0
ORF3a108L108VCttGtt66AY.30.00006
ORF3a108L108FCttTtt66AY.360.000889
ORF3a108L108delCTT---66AY.390.000148
ORF3a108L108ICttAtt66AY.450.00073
ORF3a108L108FCttTtt66AY.5.30.002024
ORF3a108L108FCttTtt66AY.590.003178
ORF3a108L108FCttTtt66AY.60.000247
ORF3a108L108FCttTtt66AY.90.000406
ORF3a108L108FCttTtt66AY.9.20.00022
ORF3a108L108FCttTtt66B0.000767
ORF3a108L108FCttTtt66B.1.1.2160.005343
ORF3a108L108LctTctC66B.1.1.3060.00263
ORF3a108L108FCttTtt66B.1.1.3170.00247
ORF3a108L108FCttTtt66B.1.1.330.002525
ORF3a108L108FCttTtt66B.1.1.370.001157
ORF3a108L108delCTT---66B.1.20.000053
ORF3a108L108FCttTtt66B.1.258.170.000624
ORF3a108L108FCttTtt66B.1.258.230.142857
ORF3a108L108FCttTtt66B.1.3960.004234
ORF3a108L108FCttTtt66B.1.4740.011407
ORF3a108L108FCttTtt66B.1.930.005602
ORF3a108L108FCttTtt66P.1.170.000971
ORF3a108L108SCTtTCt35All0.000001
ORF3a108L108SCTtAGt25All0
ORF3a108L108LctTctC55AY.1020.000133
ORF3a108L108LctTctC55AY.1030.000031
ORF3a108L108FCttTtt55AY.1210.000677
ORF3a108L108FCttTtt55AY.130.000805
ORF3a108L108FCttTtt55AY.3.10.000426
ORF3a108L108FCttTtt55AY.370.00158
ORF3a108L108FCttTtt55B.1.1.3060.002192
ORF3a108L108delCTT---55B.1.2430.000348
ORF3a108L108ICttAtt55B.1.4290.000118
ORF3a108L108PcTtcCt55B.1.4290.000118
ORF3a108L108FCttTtt55B.1.5260.000118
ORF3a108L108FCttTtt55B.1.5610.001985
ORF3a108L108FCttTtt55B.1.6020.03268
ORF3a108L108delCTT---55D.20.000375
ORF3a108L108LctTctC35D.20.000225
ORF3a108L108LctTctA25D.20.00015
ORF3a108L108delCTT---55P.10.000079
ORF3a108L108FCttTtt55Q.80.000825
ORF3a108L108PcTtcCt55R.10.00045
ORF3a108L108FCttTtt55W.10.043478
ORF3a108L108FCttTtt44AE.10.045455
ORF3a108L108PcTtcCt44AY.1030.000025
ORF3a108L108PcTtcCt44AY.1200.000149
ORF3a108L108FCttTtt44AY.140.000352
ORF3a108L108PcTtcCt44AY.250.000024
ORF3a108L108delCTT---44AY.260.000113
ORF3a108L108VCttGtt44AY.40.000006
ORF3a108L108ICttAtt44AY.40.000006
ORF3a108L108delCTT---44AY.420.000161
ORF3a108L108delCTT---44AY.470.000124
ORF3a108L108FCttTtt44AY.670.001857
ORF3a108L108FCttTtt44AY.75.10.000721
ORF3a108L108FCttTtt44AY.770.00451
ORF3a108L108FCttTtt44AY.910.002922
ORF3a108L108PcTtcCt44B.10.000037
ORF3a108L108LctTctC24B.10.000018
ORF3a108L108LctTctG14B.10.000009
ORF3a108L108LctTctA14B.10.000009
ORF3a108L108FCttTtt44B.1.1.4340.001394
ORF3a108L108RcTtcGt44B.1.1.70.000004
ORF3a108L108FCttTtt44B.1.1580.095238
ORF3a108L108FCttTtt44B.1.177.600.000874
ORF3a108L108FCttTtt44B.1.2370.0199
ORF3a108L108FCttTtt44B.1.36.290.002069
ORF3a108L108FCttTtt44B.1.4040.005208
ORF3a108L108delCTT---44B.1.5250.000453
ORF3a108L108ICttAtt44B.1.617.20.000015
ORF3a108L108delCTT---44B.1.6210.000354
ORF3a108L108FCttTtt44P.1.150.000929
ORF3a108L108FCttTtt44Q.30.00058
ORF3a108L108FCttTtt230.111111
ORF3a108L108FCtTTtC130.055556
ORF3a108L108FCttTtt33AY.1130.000427
ORF3a108L108FCttTtt33AY.16.10.00141
ORF3a108L108ICttAtt33AY.260.000085
ORF3a108L108LctTctC33AY.39.10.000119
ORF3a108L108del1Ctt-tt33AY.40.000005
ORF3a108L108HcTtcAt33AY.430.000013
ORF3a108L108PcTtcCt33AY.440.000018
ORF3a108L108FCttTtt33AY.46.60.000217
ORF3a108L108FCttTtt33AY.5.40.00083
ORF3a108L108FCttTtt33AY.580.002722
ORF3a108L108FCttTtt33AY.700.000626
ORF3a108L108FCttTtt33AY.920.000862
ORF3a108L108LctTctC23B.1.10.000036
ORF3a108L108LctTctG13B.1.10.000018
ORF3a108L108FCttTtt33B.1.1.340.039474
ORF3a108L108FCttTtt33B.1.1.3550.046154
ORF3a108L108FCttTtt33B.1.1390.002199
ORF3a108L108PcTtcCt33B.1.1770.00004
ORF3a108L108FCttTtt33B.1.214.20.001799
ORF3a108L108VCttGtt33B.1.2930.0375
ORF3a108L108delCTT---33B.1.3510.000089
ORF3a108L108FCttTtt33B.1.3690.000856
ORF3a108L108FCttTtt33B.1.4160.003807
ORF3a108L108FCttTtt33B.1.466.20.001174
ORF3a108L108FCttTtt33B.1.4800.007463
ORF3a108L108FCttTtt33B.1.5950.000783
ORF3a108L108LctTctC23B.1.617.20.000008
ORF3a108L108LctTctA13B.1.617.20.000004
ORF3a108L108FCttTtt33B.1.6190.002613
ORF3a108L108FCttTtt33B.1.6370.000219
ORF3a108L108ICttAtt33P.1.140.000143
ORF3a108L108delCTT---33P.1.150.000697
ORF3a108L108RcTtcGt220.111111
ORF3a108L108FCttTtt22A0.000774
ORF3a108L108FCttTtt22A.280.005291
ORF3a108L108FCttTtt22AD.20.000438
ORF3a108L108delCTT---22AE.80.000978
ORF3a108L108FCttTtt22AU.20.004843
ORF3a108L108delCTT---22AY.1010.000981
ORF3a108L108FCttTtt22AY.1050.001286
ORF3a108L108FCttTtt22AY.1160.000574
ORF3a108L108delCTT---22AY.1200.000074
ORF3a108L108FCttTtt22AY.160.000759
ORF3a108L108ICtTAtC22AY.340.000194
ORF3a108L108FCttTtt22AY.39.10.000079
ORF3a108L108delCTT---22AY.4.20.000043
ORF3a108L108FCttTtt22AY.4.2.10.000298
ORF3a108L108FCttTtt22AY.4.40.000818
ORF3a108L108LctTctG12AY.4.50.000107
ORF3a108L108LctTctC12AY.4.50.000107
ORF3a108L108ICttAtt22AY.440.000012
ORF3a108L108delCTT---22AY.460.000208
ORF3a108L108FCttTtt22AY.46.20.001271
ORF3a108L108delCTT---22AY.46.60.000144
ORF3a108L108FCttTtt22AY.550.001835
ORF3a108L108FCttTtt22AY.630.000774
ORF3a108L108FCttTtt22AY.690.000373
ORF3a108L108FCttTtt22AY.850.000854
ORF3a108L108FCttTtt22AY.880.001768
ORF3a108L108ICttAtt22AY.90.000135
ORF3a108L108ICttAtt22B0.000256
ORF3a108L108VCttGtt22B.10.000018
ORF3a108L108delCTT---22B.1.10.000036
ORF3a108L108PcTtcCt22B.1.10.000036
ORF3a108L108SCTtTCt12B.1.10.000018
ORF3a108L108SCTtAGt12B.1.10.000018
ORF3a108L108FCttTtt22B.1.1.2070.002364
ORF3a108L108FCttTtt22B.1.1.2690.002706
ORF3a108L108VCttGtt22B.1.1.3180.000604
ORF3a108L108FCttTtt22B.1.1.3720.001377
ORF3a108L108FCttTtt22B.1.1.500.001358
ORF3a108L108delCTT---22B.1.1.5190.000079
ORF3a108L108FCttTtt22B.1.1.950.039216
ORF3a108L108FCttTtt22B.1.1110.00235
ORF3a108L108ICttAtt22B.1.160.160.001859
ORF3a108L108LctTctC22B.1.1770.000026
ORF3a108L108FCttTtt22B.1.177.40.000422
ORF3a108L108FCttTtt22B.1.177.440.001038
ORF3a108L108FCttTtt22B.1.177.550.004662
ORF3a108L108LctTctA22B.1.177.70.00033
ORF3a108L108FCttTtt22B.1.177.70.00033
ORF3a108L108FCttTtt22B.1.177.730.001133
ORF3a108L108PcTtcCt22B.1.2210.000142
ORF3a108L108SCTtTCt22B.1.2210.000142
ORF3a108L108FCttTtt22B.1.2390.002442
ORF3a108L108FCttTtt22B.1.2650.002541
ORF3a108L108FCttTtt22B.1.3370.011173
ORF3a108L108LctTctC22B.1.3510.000059
ORF3a108L108FCttTtt22B.1.3800.013245
ORF3a108L108FCttTtt22B.1.3970.009709
ORF3a108L108FCttTtt22B.1.4200.020833
ORF3a108L108FCttTtt22B.1.4500.022727
ORF3a108L108delCTT---22B.1.5750.000607
ORF3a108L108ICttAtt22B.1.5880.00182
ORF3a108L108del1cTtc-t22B.1.5960.000174
ORF3a108L108FCttTtt22B.1.621.10.001012
ORF3a108L108FCttTtt22B.1.6250.004706
ORF3a108L108VCttGtt22C.350.001548
ORF3a108L108FCttTtt22C.360.001821
ORF3a108L108HcTtcAt22D.20.00015
ORF3a108L108del1cTtc-t22D.20.00015
ORF3a108L108FCttTtt22L.30.007092
ORF3a108L108ICttAtt22P.10.000032
ORF3a108L108LctTctC22P.10.000032
ORF3a108L108PcTtcCt22P.1.120.000968
ORF3a108L108FCttTtt22P.1.120.000968
ORF3a108L108delCTT---22P.1.17.10.00175
ORF3a108L108FCttTtt22W.40.002703
ORF3a108L108PcTtcCt110.055556
ORF3a108L108ACTtGCt110.055556
ORF3a108L108VCttGtt110.055556
ORF3a108L108delCTT---11A0.000387
ORF3a108L108LctTctC11A.2.50.000499
ORF3a108L108FCttTtt11AE.80.000489
ORF3a108L108del2CTt--t11AH.30.003802
ORF3a108L108QcTTcAA11All0
ORF3a108L108GCTtGGt11All0
ORF3a108L108DCTtGAt11All0
ORF3a108L108ACTtGCt11All0
ORF3a108L108NCTtAAt11All0
ORF3a108L108delCTT---11AV.10.005051
ORF3a108L108FCttTtt11AW.10.003049
ORF3a108L108delCTT---11AY.1000.000046
ORF3a108L108delCTT---11AY.1080.001103
ORF3a108L108FCttTtt11AY.110.001339
ORF3a108L108FCttTtt11AY.1100.000113
ORF3a108L108delCTT---11AY.1110.000183
ORF3a108L108FCttTtt11AY.1140.000231
ORF3a108L108LctTctC11AY.1190.000035
ORF3a108L108LctTctC11AY.1200.000037
ORF3a108L108delCTT---11AY.1210.000135
ORF3a108L108PcTtcCt11AY.160.00038
ORF3a108L108FCttTtt11AY.190.00114
ORF3a108L108ICttAtt11AY.200.000039
ORF3a108L108delCTT---11AY.200.000039
ORF3a108L108FCttTtt11AY.210.001898
ORF3a108L108delCTT---11AY.230.00007
ORF3a108L108FCttTtt11AY.240.000431
ORF3a108L108LctTctC11AY.250.000006
ORF3a108L108FCttTtt11AY.280.00189
ORF3a108L108ICttAtt11AY.290.000016
ORF3a108L108PcTtcCt11AY.290.000016
ORF3a108L108delCTT---11AY.30.00001
ORF3a108L108ICttAtt11AY.30.00001
ORF3a108L108delCTT---11AY.3.10.000085
ORF3a108L108LctTctC11AY.330.000067
ORF3a108L108delCTT---11AY.340.000097
ORF3a108L108del2CTT--N11AY.34.10.00051
ORF3a108L108FCttTtt11AY.380.000499
ORF3a108L108PcTtcCt11AY.390.000025
ORF3a108L108LctTctC11AY.390.000025
ORF3a108L108delCTT---11AY.39.10.00004
ORF3a108L108RcTtcGt11AY.40.000002
ORF3a108L108PcTtcCt11AY.4.20.000022
ORF3a108L108ICttAtt11AY.4.20.000022
ORF3a108L108LctTctC11AY.4.20.000022
ORF3a108L108del1cTtc-t11AY.4.20.000022
ORF3a108L108delCTT---11AY.4.2.10.000149
ORF3a108L108del1Ctt-tt11AY.4.50.000107
ORF3a108L108delCTT---11AY.4.50.000107
ORF3a108L108FCttTtt11AY.400.000964
ORF3a108L108VCttGtt11AY.440.000006
ORF3a108L108delCTT---11AY.440.000006
ORF3a108L108LctTctA11AY.440.000006
ORF3a108L108HcTtcAt11AY.460.000104
ORF3a108L108ICttAtt11AY.46.60.000072
ORF3a108L108LctTctC11AY.470.000031
ORF3a108L108PcTtcCt11AY.470.000031
ORF3a108L108FCttTtt11AY.480.000465
ORF3a108L108delCTT---11AY.50.000021
ORF3a108L108delCTT---11AY.5.40.000277
ORF3a108L108FCttTtt11AY.510.000909
ORF3a108L108FCttTtt11AY.530.000288
ORF3a108L108ICttAtt11AY.550.000917
ORF3a108L108PcTtcCt11AY.60.000041
ORF3a108L108delCTT---11AY.600.000938
ORF3a108L108delCTT---11AY.610.000105
ORF3a108L108ICttAtt11AY.610.000105
ORF3a108L108delCTT---11AY.620.000436
ORF3a108L108delCTT---11AY.640.000595
ORF3a108L108delCTT---11AY.680.000274
ORF3a108L108PcTtcCt11AY.690.000187
ORF3a108L108del1cTtc-t11AY.7.10.000113
ORF3a108L108FCttTtt11AY.710.000475
ORF3a108L108FCttTtt11AY.740.000116
ORF3a108L108delCTT---11AY.75.10.00018
ORF3a108L108FCttTtt11AY.790.001211
ORF3a108L108FCttTtt11AY.840.000437
ORF3a108L108LctTctC11AY.840.000437
ORF3a108L108LctTctC11AY.850.000427
ORF3a108L108delCTT---11AY.880.000884
ORF3a108L108PcTtcCt11AY.9.10.000084
ORF3a108L108delCTT---11AY.9.10.000084
ORF3a108L108FCttTtt11AY.900.000684
ORF3a108L108delCTT---11AY.910.00073
ORF3a108L108delCTT---11AY.98.10.000048
ORF3a108L108delCTT---11AY.99.20.000092
ORF3a108L108FCttTtt11AZ.2.10.00813
ORF3a108L108delCTT---11B0.000128
ORF3a108L108del1cTtc-t11B.10.000009
ORF3a108L108HcTtcAt11B.10.000009
ORF3a108L108RcTtcGt11B.10.000009
ORF3a108L108del2CTt--t11B.10.000009
ORF3a108L108GCTtGGt11B.1.10.000018
ORF3a108L108ICttAtt11B.1.10.000018
ORF3a108L108VCttGtt11B.1.1.1010.01
ORF3a108L108FCttTtt11B.1.1.1290.009174
ORF3a108L108FCttTtt11B.1.1.1330.008475
ORF3a108L108FCttTtt11B.1.1.1410.002012
ORF3a108L108FCttTtt11B.1.1.1770.019231
ORF3a108L108LctTctC11B.1.1.1920.002309
ORF3a108L108FCttTtt11B.1.1.1980.001468
ORF3a108L108FCttTtt11B.1.1.2050.003717
ORF3a108L108FCttTtt11B.1.1.2190.005
ORF3a108L108FCttTtt11B.1.1.2510.007937
ORF3a108L108FCttTtt11B.1.1.2560.013699
ORF3a108L108FCttTtt11B.1.1.2740.005051
ORF3a108L108FCttTtt11B.1.1.2800.003086
ORF3a108L108PcTtcCt11B.1.1.2840.000107
ORF3a108L108FCttTtt11B.1.1.2860.002899
ORF3a108L108FCttTtt11B.1.1.2880.001916
ORF3a108L108FCttTtt11B.1.1.2940.001266
ORF3a108L108FCttTtt11B.1.1.3030.002762
ORF3a108L108ICttAtt11B.1.1.3060.000438
ORF3a108L108del2cTTc--11B.1.1.3110.000358
ORF3a108L108delCTT---11B.1.1.3150.008475
ORF3a108L108FCttTtt11B.1.1.3160.000925
ORF3a108L108LctTctC11B.1.1.3170.000412
ORF3a108L108FCttTtt11B.1.1.3260.001761
ORF3a108L108delCTT---11B.1.1.330.000421
ORF3a108L108PcTtcCt11B.1.1.3400.045455
ORF3a108L108FCttTtt11B.1.1.3480.000796
ORF3a108L108FCttTtt11B.1.1.3540.004386
ORF3a108L108FCttTtt11B.1.1.3750.011905
ORF3a108L108FCttTtt11B.1.1.390.00051
ORF3a108L108FCttTtt11B.1.1.3970.002252
ORF3a108L108FCttTtt11B.1.1.4090.002833
ORF3a108L108delCTT---11B.1.1.4090.002833
ORF3a108L108delCTT---11B.1.1.4180.022727
ORF3a108L108VCttGtt11B.1.1.4190.007407
ORF3a108L108delCTT---11B.1.1.4200.001006
ORF3a108L108FCttTtt11B.1.1.440.00241
ORF3a108L108FCttTtt11B.1.1.5280.004808
ORF3a108L108QcTTcAA11B.1.1.70.000001
ORF3a108L108del1Ctt-tt11B.1.1.70.000001
ORF3a108L108VCttGtt11B.1.1.70.000001
ORF3a108L108PcTtcCt11B.1.1.700.000341
ORF3a108L108FCttTtt11B.1.1.980.018519
ORF3a108L108FCttTtt11B.1.1080.005814
ORF3a108L108delCTT---11B.1.1400.018868
ORF3a108L108FCttTtt11B.1.1400.018868
ORF3a108L108FCttTtt11B.1.1470.000756
ORF3a108L108FCttTtt11B.1.1570.002985
ORF3a108L108del2CTt--t11B.1.1570.002985
ORF3a108L108del1Ctt-tt11B.1.1600.000031
ORF3a108L108PcTtcCt11B.1.1600.000031
ORF3a108L108LctTctC11B.1.1600.000031
ORF3a108L108FCttTtt11B.1.160.120.00641
ORF3a108L108PcTtcCt11B.1.160.160.000929
ORF3a108L108delCTT---11B.1.160.230.004831
ORF3a108L108RcTtcGt11B.1.1770.000013
ORF3a108L108del1Ctt-tt11B.1.1770.000013
ORF3a108L108PcTtcCt11B.1.177.110.001698
ORF3a108L108PcTtcCt11B.1.177.170.000821
ORF3a108L108LctTctC11B.1.177.180.00116
ORF3a108L108FCttTtt11B.1.177.330.001645
ORF3a108L108del1Ctt-tt11B.1.177.40.000211
ORF3a108L108FCttTtt11B.1.177.500.004695
ORF3a108L108FCttTtt11B.1.177.530.002392
ORF3a108L108FCttTtt11B.1.177.560.000668
ORF3a108L108FCttTtt11B.1.177.60.000977
ORF3a108L108delCTT---11B.1.177.620.001192
ORF3a108L108FCttTtt11B.1.177.750.001041
ORF3a108L108FCttTtt11B.1.177.860.000183
ORF3a108L108ICttAtt11B.1.177.860.000183
ORF3a108L108PcTtcCt11B.1.20.000009
ORF3a108L108LctTctC11B.1.20.000009
ORF3a108L108LctTctG11B.1.2210.000071
ORF3a108L108FCttTtt11B.1.2220.001692
ORF3a108L108RcTtcGt11B.1.2340.000132
ORF3a108L108FCttTtt11B.1.2400.000216
ORF3a108L108VCttGtt11B.1.2430.00007
ORF3a108L108ICttAtt11B.1.2430.00007
ORF3a108L108LctTctC11B.1.2430.00007
ORF3a108L108FCttTtt11B.1.2470.014925
ORF3a108L108delCTT---11B.1.2580.000067
ORF3a108L108VCttGtt11B.1.2580.000067
ORF3a108L108del2cTTc--11B.1.2580.000067
ORF3a108L108FCttTtt11B.1.258.110.000396
ORF3a108L108ICttAtt11B.1.258.120.007874
ORF3a108L108VCttGtt11B.1.258.170.000104
ORF3a108L108FCttTtt11B.1.258.180.1
ORF3a108L108FCttTtt11B.1.2600.003344
ORF3a108L108FCttTtt11B.1.3110.000275
ORF3a108L108FCttTtt11B.1.351.20.000303
ORF3a108L108FCttTtt11B.1.3560.001727
ORF3a108L108delCTT---11B.1.360.000146
ORF3a108L108LctTctC11B.1.36.180.00042
ORF3a108L108FCttTtt11B.1.36.220.001208
ORF3a108L108FCttTtt11B.1.36.250.002208
ORF3a108L108FCttTtt11B.1.36.270.000763
ORF3a108L108FCttTtt11B.1.36.80.001
ORF3a108L108FCttTtt11B.1.36.90.003215
ORF3a108L108FCttTtt11B.1.369.10.027027
ORF3a108L108FCttTtt11B.1.3820.008929
ORF3a108L108FCttTtt11B.1.3990.001934
ORF3a108L108delCTT---11B.1.4000.000429
ORF3a108L108FCttTtt11B.1.4010.008197
ORF3a108L108FCttTtt11B.1.416.10.001563
ORF3a108L108delCTT---11B.1.416.10.001563
ORF3a108L108PcTtcCt11B.1.4270.00005
ORF3a108L108LctTctC11B.1.4270.00005
ORF3a108L108FCttTtt11B.1.4280.00102
ORF3a108L108FCttTtt11B.1.428.30.012821
ORF3a108L108VCttGtt11B.1.4290.000024
ORF3a108L108FCttTtt11B.1.4680.005714
ORF3a108L108ICttAtt11B.1.5250.000113
ORF3a108L108PcTtcCt11B.1.5250.000113
ORF3a108L108LctTctC11B.1.5260.000024
ORF3a108L108FCttTtt11B.1.5380.008065
ORF3a108L108FCttTtt11B.1.5390.017544
ORF3a108L108FCttTtt11B.1.5400.009709
ORF3a108L108FCttTtt11B.1.5510.00129
ORF3a108L108FCttTtt11B.1.5580.004566
ORF3a108L108FCttTtt11B.1.5640.000426
ORF3a108L108FCttTtt11B.1.5650.00081
ORF3a108L108FCttTtt11B.1.5660.019231
ORF3a108L108delCTT---11B.1.5670.003333
ORF3a108L108delCTT---11B.1.5680.001111
ORF3a108L108del1cTtc-t11B.1.5760.000907
ORF3a108L108FCttTtt11B.1.5820.000491
ORF3a108L108FCttTtt11B.1.5880.00091
ORF3a108L108FCttTtt11B.1.5900.004545
ORF3a108L108LctTctA11B.1.5960.000087
ORF3a108L108delCTT---11B.1.5960.000087
ORF3a108L108FCttTtt11B.1.6090.000479
ORF3a108L108LctTctC11B.1.6090.000479
ORF3a108L108HcTtcAt11B.1.617.10.000129
ORF3a108L108delCTT---11B.1.617.10.000129
ORF3a108L108PcTtcCt11B.1.617.10.000129
ORF3a108L108VCttGtt11B.1.617.10.000129
ORF3a108L108ICttAtt11B.1.617.10.000129
ORF3a108L108HcTtcAt11B.1.617.20.000004
ORF3a108L108FCttTtt11B.1.6200.000946
ORF3a108L108FCttTtt11B.1.6310.003367
ORF3a108L108HcTtcAt11B.1.6370.000073
ORF3a108L108delCTT---11B.1.6380.052632
ORF3a108L108FCttTtt11B.1.80.001972
ORF3a108L108HcTtcAt11B.1.910.002075
ORF3a108L108VCttGtt11B.1.910.002075
ORF3a108L108RcTtcGt11B.1.910.002075
ORF3a108L108SCTtAGt11B.1.910.002075
ORF3a108L108ICttAtt11B.1.910.002075
ORF3a108L108DCTtGAt11B.1.910.002075
ORF3a108L108FCttTtt11B.300.014706
ORF3a108L108FCttTtt11B.4.50.011905
ORF3a108L108FCttTtt11B.550.00295
ORF3a108L108FCttTtt11C.160.00106
ORF3a108L108FCttTtt11C.260.007353
ORF3a108L108FCttTtt11C.36.30.000567
ORF3a108L108FCttTtt11C.80.004464
ORF3a108L108PcTtcCt11D.20.000075
ORF3a108L108ICttAtt11D.20.000075
ORF3a108L108NCTtAAt11D.20.000075
ORF3a108L108FCttTtt11L.10.001905
ORF3a108L108HcTtcAt11P.1.10.000318
ORF3a108L108FCttTtt11P.1.130.000898
ORF3a108L108FCttTtt11P.20.000187
ORF3a108L108PcTtcCt11P.20.000187
ORF3a108L108FCttTtt11P.60.003145
ORF3a108L108delCTT---11Q.40.000455
ORF3a108L108delCTT---11U.30.003861