CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 106

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a106L106LsynctCctT53136527770.99324425708-25710
ORF3a106L106LsynctCctA531362140.004027425708-25710
ORF3a106L106LsynctCctG531361330.0025030125708-25710
ORF3a106L106LsynCtCTtG53136100.00018819625708-25710
ORF3a106L106LsynCtCTtA5313620.000037639325708-25710
ORF3a106L106FnonsynCtcTtc12426123890.99702225708-25710
ORF3a106L106FnonsynCtCTtT12426370.0029776325708-25710
ORF3a106L106deldelCTC---425425125708-25710
ORF3a106L106InonsynCtcAtc3853820.99220825708-25710
ORF3a106L106InonsynCtCAtT38520.0051948125708-25710
ORF3a106L106InonsynCtCAtA38510.002597425708-25710
ORF3a106L106PnonsyncTccCc3373340.99109825708-25710
ORF3a106L106PnonsyncTCcCT33720.0059347225708-25710
ORF3a106L106PnonsyncTCcCG33710.0029673625708-25710
ORF3a106L106VnonsynCtcGtc3263240.99386525708-25710
ORF3a106L106VnonsynCtCGtG32610.0030674825708-25710
ORF3a106L106VnonsynCtCGtA32610.0030674825708-25710
ORF3a106L106RnonsyncTccGc2382350.98739525708-25710
ORF3a106L106RnonsyncTCcGA23830.01260525708-25710
ORF3a106L106HnonsyncTccAc8686125708-25710
ORF3a106L106SnonsynCTcTCc1790.52941225708-25710
ORF3a106L106SnonsynCTCTCT1770.41176525708-25710
ORF3a106L106SnonsynCTCTCG1710.058823525708-25710
ORF3a106L106del2delCTc--c430.7525708-25710
ORF3a106L106del1delCtc-tc420.525708-25710
ORF3a106L106del1delCtC-tT420.525708-25710
ORF3a106L106del2delCTC--A410.2525708-25710
ORF3a106L106CnonsynCTcTGc33125708-25710
ORF3a106L106XnonsynCTCTGA22125708-25710
ORF3a106L106GnonsynCTcGGc210.525708-25710
ORF3a106L106GnonsynCTCGGA210.525708-25710
ORF3a106L106YnonsynCTcTAc11125708-25710

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a106L106LctCctT5277753136All0.010094
ORF3a106L106LctCctA21453136All0.000041
ORF3a106L106LctCctG13353136All0.000025
ORF3a106L106LCtCTtG1053136All0.000002
ORF3a106L106LCtCTtA253136All0
ORF3a106L106LctCctT2977629776B.1.1600.928643
ORF3a106L106FCtcTtc1238912426All0.00237
ORF3a106L106FCtCTtT3712426All0.000007
ORF3a106L106LctCctT49514956AY.30.049245
ORF3a106L106LctCctA44956AY.30.00004
ORF3a106L106LctCctG14956AY.30.00001
ORF3a106L106FCtcTtc42274229B.1.1.70.003784
ORF3a106L106FCtCTtT24229B.1.1.70.000002
ORF3a106L106LctCctT24012584B.1.1.70.002149
ORF3a106L106LctCctA1072584B.1.1.70.000096
ORF3a106L106LctCctG732584B.1.1.70.000065
ORF3a106L106LCtCTtG32584B.1.1.70.000003
ORF3a106L106LctCctT24492449AY.630.947389
ORF3a106L106FCtcTtc16641666B.1.6210.147296
ORF3a106L106FCtCTtT21666B.1.6210.000177
ORF3a106L106LctCctT10391039B.1.160.160.965613
ORF3a106L106LctCctT775775B.1.160.80.998711
ORF3a106L106LctCctT718730AY.40.001118
ORF3a106L106LctCctA8730AY.40.000012
ORF3a106L106LctCctG4730AY.40.000006
ORF3a106L106FCtcTtc647647AY.40.001007
ORF3a106L106LctCctT585585B.1.160.170.994898
ORF3a106L106FCtcTtc547548AY.250.00329
ORF3a106L106FCtCTtT1548AY.250.000006
ORF3a106L106LctCctT535539B.10.0049
ORF3a106L106LctCctA2539B.10.000018
ORF3a106L106LctCctG2539B.10.000018
ORF3a106L106FCtcTtc493493AY.430.002184
ORF3a106L106LctCctT479479B.1.160.70.995842
ORF3a106L106LctCctT451451B.1.160.140.955508
ORF3a106L106FCtcTtc435435P.10.006853
ORF3a106L106delCTC---425425All0.000081
ORF3a106L106LctCctT409409B.1.160.260.990315
ORF3a106L106LctCctT374388B.1.617.20.001408
ORF3a106L106LctCctG8388B.1.617.20.00003
ORF3a106L106LctCctA6388B.1.617.20.000023
ORF3a106L106ICtcAtc382385All0.000073
ORF3a106L106ICtCAtT2385All0
ORF3a106L106ICtCAtA1385All0
ORF3a106L106LctCctT338338B.1.160.280.988304
ORF3a106L106PcTccCc334337All0.000064
ORF3a106L106PcTCcCT2337All0
ORF3a106L106PcTCcCG1337All0
ORF3a106L106VCtcGtc324326All0.000062
ORF3a106L106VCtCGtG1326All0
ORF3a106L106VCtCGtA1326All0
ORF3a106L106FCtcTtc312312B.1.617.20.001175
ORF3a106L106FCtcTtc289289B.1.3510.008591
ORF3a106L106LctCctT269282AY.430.001192
ORF3a106L106LctCctA12282AY.430.000053
ORF3a106L106LctCctG1282AY.430.000004
ORF3a106L106FCtcTtc279279B.1.360.040706
ORF3a106L106LctCctT275275AY.1190.00971
ORF3a106L106FCtcTtc263264AY.440.001601
ORF3a106L106FCtCTtT1264AY.440.000006
ORF3a106L106LctCctT243246B.1.20.00214
ORF3a106L106LctCctG2246B.1.20.000018
ORF3a106L106LctCctA1246B.1.20.000009
ORF3a106L106RcTccGc235238All0.000045
ORF3a106L106RcTCcGA3238All0.000001
ORF3a106L106LctCctT232232B.1.160.290.978903
ORF3a106L106FCtcTtc227228B.1.20.001999
ORF3a106L106FCtCTtT1228B.1.20.000009
ORF3a106L106ICtcAtc226226AY.99.20.020828
ORF3a106L106LctCctT226226B.1.160.241
ORF3a106L106LctCctT225225B.1.160.330.995575
ORF3a106L106LctCctT198215AY.1030.001229
ORF3a106L106LctCctG17215AY.1030.000106
ORF3a106L106LctCctT205205B.1.160.230.990338
ORF3a106L106LctCctT198198B.1.160.150.980198
ORF3a106L106LctCctT197197B.1.160.300.58631
ORF3a106L106LctCctT185185B.1.160.320.793991
ORF3a106L106FCtcTtc176177B.10.001612
ORF3a106L106FCtCTtT1177B.10.000009
ORF3a106L106LctCctT174174B.1.160.110.994286
ORF3a106L106LctCctT144153AY.440.000876
ORF3a106L106LctCctA5153AY.440.00003
ORF3a106L106LctCctG4153AY.440.000024
ORF3a106L106LctCctT153153B.1.160.120.980769
ORF3a106L106LctCctT146146B.1.160.220.986486
ORF3a106L106LctCctT137138B.1.1770.001804
ORF3a106L106LctCctA1138B.1.1770.000013
ORF3a106L106LctCctT137137B.1.160.181
ORF3a106L106LctCctT136136B.1.160.90.978417
ORF3a106L106VCtcGtc133133AY.4.50.014296
ORF3a106L106FCtcTtc122123AY.1030.000758
ORF3a106L106FCtCTtT1123AY.1030.000006
ORF3a106L106FCtcTtc123123C.350.095201
ORF3a106L106LctCctT122122B.1.160.310.983871
ORF3a106L106LctCctT121121AB.10.991803
ORF3a106L106LctCctT120120AY.250.000722
ORF3a106L106LctCctT115119B.1.10.002086
ORF3a106L106LctCctA4119B.1.10.000073
ORF3a106L106LctCctT117117B.1.160.100.943548
ORF3a106L106LctCctT95107AY.39.10.003763
ORF3a106L106LctCctA12107AY.39.10.000475
ORF3a106L106FCtcTtc106106AY.470.003297
ORF3a106L106FCtcTtc102102AY.30.001015
ORF3a106L106LctCctT9497AY.340.009115
ORF3a106L106LctCctA397AY.340.000291
ORF3a106L106FCtcTtc9596B.1.10.001723
ORF3a106L106FCtCTtT196B.1.10.000018
ORF3a106L106LctCctT9595B.1.2210.006748
ORF3a106L106LctCctT9294AY.1020.002439
ORF3a106L106LctCctA294AY.1020.000053
ORF3a106L106PcTccCc9494B.1.1.70.000084
ORF3a106L106FCtcTtc9292AY.200.003576
ORF3a106L106LctCctT9090B.1.160.251
ORF3a106L106HcTccAc8686All0.000016
ORF3a106L106FCtcTtc8686B.1.1.5190.003415
ORF3a106L106LctCctT7676B.1.160.200.678571
ORF3a106L106FCtcTtc7575B.1.4290.001765
ORF3a106L106LctCctT7474B.1.6220.961039
ORF3a106L106LctCctT7272AY.1170.006085
ORF3a106L106PcTccCc7272B.1.258.170.007486
ORF3a106L106LctCctT7071P.10.001103
ORF3a106L106LCtCTtG171P.10.000016
ORF3a106L106FCtcTtc6969A.23.10.048592
ORF3a106L106delCTC---6969B.1.1.70.000062
ORF3a106L106LctCctT6666AY.1000.003036
ORF3a106L106LctCctT6666B.1.160.271
ORF3a106L106LctCctT6565B.1.1640.970149
ORF3a106L106FCtcTtc6363AY.4.20.001366
ORF3a106L106FCtcTtc6262AY.5.40.017156
ORF3a106L106FCtcTtc6262B.1.5260.001457
ORF3a106L106FCtcTtc6161B.1.177.530.145933
ORF3a106L106VCtcGtc6161B.1.617.20.00023
ORF3a106L106LctCctT5959B.1.4290.001388
ORF3a106L106LctCctT5357B.1.2580.003527
ORF3a106L106LctCctG357B.1.2580.0002
ORF3a106L106LctCctA157B.1.2580.000067
ORF3a106L106FCtcTtc5555AY.1130.007831
ORF3a106L106VCtcGtc5454AY.40.000084
ORF3a106L106LctCctT5353AY.200.00206
ORF3a106L106LctCctT5252AY.470.001617
ORF3a106L106LctCctT5050AY.60.002056
ORF3a106L106FCtcTtc5050B.1.1770.000658
ORF3a106L106LctCctT4949AY.3.10.004178
ORF3a106L106delCTC---4949AY.40.000076
ORF3a106L106FCtcTtc4949AY.50.001012
ORF3a106L106LctCctT4949B.1.160.211
ORF3a106L106FCtcTtc4848B.1.3110.01318
ORF3a106L106LctCctT4647AY.290.000726
ORF3a106L106LctCctA147AY.290.000016
ORF3a106L106LctCctT4547B.1.5260.001058
ORF3a106L106LctCctA147B.1.5260.000024
ORF3a106L106LctCctG147B.1.5260.000024
ORF3a106L106FCtcTtc4646P.1.140.002199
ORF3a106L106LctCctT4545B.1.5970.208333
ORF3a106L106delCTC---4242AY.1030.000261
ORF3a106L106FCtcTtc4141AY.1000.001886
ORF3a106L106RcTccGc4141AY.440.00025
ORF3a106L106LctCctT3940AY.390.000964
ORF3a106L106LctCctA140AY.390.000025
ORF3a106L106FCtcTtc4040B.1.1.2220.00816
ORF3a106L106FCtcTtc3939AY.1020.001034
ORF3a106L106LctCctT3838B.1.1.5190.001509
ORF3a106L106LctCctT3838B.1.177.310.436782
ORF3a106L106LctCctT3838B.1.5750.011529
ORF3a106L106FCtcTtc3737B.1.2790.019004
ORF3a106L106LctCctT3536AY.50.000723
ORF3a106L106LctCctA136AY.50.000021
ORF3a106L106delCTC---3535B.10.000321
ORF3a106L106LctCctT3535B.1.160.130.972222
ORF3a106L106LctCctT3535B.1.351.20.01059
ORF3a106L106FCtcTtc3434AY.39.10.001347
ORF3a106L106FCtcTtc3434AY.4.10.025074
ORF3a106L106RcTccGc3434B.1.1.70.00003
ORF3a106L106LctCctT3434B.1.177.440.017644
ORF3a106L106FCtcTtc3333AY.980.002607
ORF3a106L106LctCctT3233B.1.1.2160.028495
ORF3a106L106LctCctG133B.1.1.2160.00089
ORF3a106L106LctCctT2833B.1.6210.002479
ORF3a106L106LCtCTtG533B.1.6210.000443
ORF3a106L106FCtcTtc3131AY.390.000766
ORF3a106L106FCtcTtc3131B.1.3490.022159
ORF3a106L106LctCctT3131P.20.005786
ORF3a106L106delCTC---3030AY.430.000133
ORF3a106L106FCtcTtc3030P.20.005599
ORF3a106L106LctCctT2929AY.410.008524
ORF3a106L106PcTccCc2929B.1.617.20.000109
ORF3a106L106LctCctT2828B.1.160.191
ORF3a106L106LctCctT2727B.1.1.2140.001497
ORF3a106L106LctCctT2727B.1.2400.00582
ORF3a106L106LctCctT2626AY.820.035278
ORF3a106L106LctCctT2525B.1.1.4450.925926
ORF3a106L106FCtcTtc2525B.1.36.180.010504
ORF3a106L106ICtcAtc2424AY.670.011142
ORF3a106L106delCTC---2424B.1.1770.000316
ORF3a106L106FCtcTtc2323B.1.1.1530.025192
ORF3a106L106LctCctT2223B.1.2430.001531
ORF3a106L106LctCctG123B.1.2430.00007
ORF3a106L106LctCctT2323B.1.3510.000684
ORF3a106L106LctCctT2323B.1.6180.092742
ORF3a106L106FCtcTtc2222AY.1190.000777
ORF3a106L106LctCctT2222B.1.1390.016129
ORF3a106L106PcTccCc2222B.1.20.000194
ORF3a106L106HcTccAc2222B.1.36.170.01087
ORF3a106L106ICtcAtc2222B.1.617.20.000083
ORF3a106L106LctCctT2121AY.4.20.000455
ORF3a106L106LctCctT2121B.1.1.2910.01559
ORF3a106L106LctCctT2121B.1.360.003064
ORF3a106L106RcTccGc2121Q.30.003046
ORF3a106L106HcTccAc2020B.1.1.5190.000794
ORF3a106L106LctCctT2020B.1.4270.00101
ORF3a106L106LctCctT2020C.360.018215
ORF3a106L106LctCctT1719AY.1200.000632
ORF3a106L106LctCctA219AY.1200.000074
ORF3a106L106LctCctT1919AY.230.001325
ORF3a106L106RcTccGc1919AY.250.000114
ORF3a106L106LctCctT1919AY.4.10.014012
ORF3a106L106LctCctT1919B.1.1.2220.003876
ORF3a106L106FCtCTtT1819B.1.1600.000561
ORF3a106L106FCtcTtc119B.1.1600.000031
ORF3a106L106LctCctT1919B.1.258.110.007531
ORF3a106L106FCtcTtc1919B.1.4270.000959
ORF3a106L106RcTccGc1919P.10.000299
ORF3a106L106HcTccAc1818AY.1110.003297
ORF3a106L106RcTccGc1818B.1.1.3060.007891
ORF3a106L106FCtcTtc1818B.1.1.3720.012397
ORF3a106L106ICtcAtc1818B.1.1.70.000016
ORF3a106L106FCtcTtc1818B.1.177.350.01244
ORF3a106L106SCTcTCc917All0.000002
ORF3a106L106SCTCTCT717All0.000001
ORF3a106L106SCTCTCG117All0
ORF3a106L106FCtcTtc1717AY.260.000481
ORF3a106L106LctCctT1717B0.002173
ORF3a106L106LctCctT1717Q.40.007731
ORF3a106L106LctCctT1616AY.450.001947
ORF3a106L106LctCctT1616AY.460.001665
ORF3a106L106LctCctA1216B.1.1.3060.005261
ORF3a106L106LctCctT416B.1.1.3060.001754
ORF3a106L106LctCctT1616B.1.1.4340.005577
ORF3a106L106LctCctT1616B.1.1110.018801
ORF3a106L106FCtcTtc1616B.1.177.160.010631
ORF3a106L106LctCctT1515A.2.50.007485
ORF3a106L106LctCctT1515AY.350.003496
ORF3a106L106LctCctT1515AY.980.001185
ORF3a106L106FCtcTtc1515B.1.1.5140.576923
ORF3a106L106FCtcTtc1414AY.480.006512
ORF3a106L106FCtcTtc1414AY.60.000576
ORF3a106L106LctCctT1414AY.750.000784
ORF3a106L106FCtcTtc1414B.1.1.10.004574
ORF3a106L106LctCctT1414B.1.1.390.007136
ORF3a106L106FCtcTtc1414B.1.1.500.009504
ORF3a106L106LctCctT1414B.1.177.210.001071
ORF3a106L106FCtcTtc1414B.1.3910.015784
ORF3a106L106LctCctT1414C.160.014846
ORF3a106L106VCtcGtc1313AY.1000.000598
ORF3a106L106FCtcTtc1313AY.130.002093
ORF3a106L106delCTC---1313AY.250.000078
ORF3a106L106FCtcTtc1313AY.290.000205
ORF3a106L106delCTC---1313AY.300.005144
ORF3a106L106LctCctT913AY.360.001334
ORF3a106L106LctCctA413AY.360.000593
ORF3a106L106ICtcAtc1313AY.40.00002
ORF3a106L106FCtcTtc1313AY.450.001582
ORF3a106L106LctCctT1313B.1.1.1570.011872
ORF3a106L106LctCctT1313B.1.1.4330.018519
ORF3a106L106LctCctT1313B.1.5090.011255
ORF3a106L106LctCctT1213B.230.035088
ORF3a106L106LctCctA113B.230.002924
ORF3a106L106LctCctT1213P.1.140.000574
ORF3a106L106LctCctA113P.1.140.000048
ORF3a106L106LctCctT1212AY.1210.001624
ORF3a106L106LctCctT1212AY.270.000777
ORF3a106L106LctCctT1012AY.420.000402
ORF3a106L106LctCctA212AY.420.00008
ORF3a106L106VCtcGtc1212AY.430.000053
ORF3a106L106ICtcAtc1212AY.440.000073
ORF3a106L106LctCctT1212AY.46.60.000866
ORF3a106L106LctCctT1212B.1.1.2770.009105
ORF3a106L106LctCctT1212B.1.177.430.017725
ORF3a106L106LctCctT1212B.1.177.730.006795
ORF3a106L106FCtcTtc1212B.1.177.820.005728
ORF3a106L106FCtcTtc1212B.1.2340.001583
ORF3a106L106LctCctT1112B.1.3110.00302
ORF3a106L106LctCctA112B.1.3110.000275
ORF3a106L106FCtcTtc1212B.1.351.30.010517
ORF3a106L106FCtcTtc1212B.1.36.290.006208
ORF3a106L106LctCctT1212B.1.5960.001046
ORF3a106L106delCTC---1212B.1.617.20.000045
ORF3a106L106FCtcTtc1212P.1.170.001941
ORF3a106L106FCtcTtc1212Q.10.001516
ORF3a106L106LctCctT1111AY.1180.000689
ORF3a106L106FCtcTtc1111AY.360.00163
ORF3a106L106FCtcTtc1111AY.420.000443
ORF3a106L106LctCctT1111B.1.2390.013431
ORF3a106L106LctCctT1111B.1.258.170.001144
ORF3a106L106LctCctT1111B.1.36.80.011
ORF3a106L106LctCctT1111Q.10.00139
ORF3a106L106ICtcAtc1010AY.1030.000062
ORF3a106L106LctCctT610AY.1130.000854
ORF3a106L106LctCctG410AY.1130.00057
ORF3a106L106FCtcTtc1010AY.1200.000372
ORF3a106L106LctCctT1010AY.260.000283
ORF3a106L106delCTC---1010AY.290.000158
ORF3a106L106FCtcTtc1010AY.3.10.000853
ORF3a106L106FCtcTtc1010AY.370.003161
ORF3a106L106PcTccCc1010AY.430.000044
ORF3a106L106LctCctT910AY.5.30.003036
ORF3a106L106LctCctA110AY.5.30.000337
ORF3a106L106LctCctT910AY.5.40.00249
ORF3a106L106LctCctA110AY.5.40.000277
ORF3a106L106LctCctT1010AY.610.001048
ORF3a106L106FCtcTtc1010AY.610.001048
ORF3a106L106LctCctT1010AY.620.004357
ORF3a106L106FCtcTtc1010AY.9.20.000367
ORF3a106L106LctCctT710AY.9.20.000257
ORF3a106L106LctCctA310AY.9.20.00011
ORF3a106L106FCtcTtc1010AZ.10.008673
ORF3a106L106FCtcTtc1010B.1.1.1480.087719
ORF3a106L106LctCctT1010B.1.1.2840.001074
ORF3a106L106FCtcTtc1010B.1.177.420.008945
ORF3a106L106LctCctT1010B.1.36.290.005173
ORF3a106L106FCtcTtc1010B.1.4330.031949
ORF3a106L106LctCctT1010B.1.760.113636
ORF3a106L106LctCctT1010Q.80.001649
ORF3a106L106LctCctT99AY.1160.002581
ORF3a106L106FCtcTtc99AY.1170.000761
ORF3a106L106FCtcTtc99AY.120.2.10.004484
ORF3a106L106RcTccGc99AY.410.002646
ORF3a106L106FCtcTtc99AY.46.40.001481
ORF3a106L106LctCctT99AY.510.008182
ORF3a106L106FCtcTtc99AY.740.001041
ORF3a106L106RcTccGc99AY.750.000504
ORF3a106L106PcTccCc99AY.90.000608
ORF3a106L106FCtcTtc99AY.90.000608
ORF3a106L106LctCctT99AY.98.10.000436
ORF3a106L106RcTccGc99B.10.000082
ORF3a106L106LctCctT99B.1.1.500.00611
ORF3a106L106LctCctT99B.1.4090.007031
ORF3a106L106LctCctT99B.1.6370.000658
ORF3a106L106LctCctT99D.20.000675
ORF3a106L106FCtcTtc88AY.140.000704
ORF3a106L106delCTC---88AY.30.00008
ORF3a106L106FCtcTtc88AY.330.000534
ORF3a106L106FCtcTtc78AY.340.000679
ORF3a106L106FCtCTtT18AY.340.000097
ORF3a106L106FCtcTtc88AY.460.000833
ORF3a106L106LctCctT78AY.46.10.007187
ORF3a106L106LctCctA18AY.46.10.001027
ORF3a106L106LctCctT88AY.770.009019
ORF3a106L106FCtcTtc88AY.98.10.000387
ORF3a106L106FCtcTtc88B.1.1.2160.007124
ORF3a106L106LctCctT88B.1.1.3170.003294
ORF3a106L106FCtcTtc88B.1.1.370.001543
ORF3a106L106LctCctT88B.1.177.770.00581
ORF3a106L106FCtcTtc88B.1.2320.004299
ORF3a106L106LctCctT88B.1.5610.003176
ORF3a106L106FCtcTtc88C.370.000929
ORF3a106L106LctCctT88Q.70.008889
ORF3a106L106LctCctT88R.10.00072
ORF3a106L106FCtcTtc670.333333
ORF3a106L106FCtCTtT170.055556
ORF3a106L106RcTccGc77AY.1030.000043
ORF3a106L106LctCctT77AY.1060.002344
ORF3a106L106FCtcTtc77AY.1060.002344
ORF3a106L106FCtcTtc77AY.1070.003262
ORF3a106L106FCtcTtc77AY.160.002658
ORF3a106L106FCtcTtc77AY.230.000488
ORF3a106L106PcTccCc77AY.40.000011
ORF3a106L106LctCctT77AY.4.2.10.001043
ORF3a106L106FCtcTtc77AY.540.000667
ORF3a106L106LctCctT77AY.550.006422
ORF3a106L106LctCctT77AY.880.006189
ORF3a106L106LctCctT77AY.90.000473
ORF3a106L106FCtcTtc77AY.920.002011
ORF3a106L106FCtcTtc77AY.950.005327
ORF3a106L106FCtcTtc77B.1.1.3220.061404
ORF3a106L106LctCctT67B.1.1.330.002525
ORF3a106L106LctCctG17B.1.1.330.000421
ORF3a106L106LctCctT77B.1.1470.005291
ORF3a106L106delCTC---77B.1.20.000062
ORF3a106L106LctCctT77B.1.2320.003761
ORF3a106L106FCtcTtc77B.1.2430.000487
ORF3a106L106LctCctT77B.1.3460.009174
ORF3a106L106FCtcTtc77B.1.5170.002989
ORF3a106L106FCtcTtc77P.1.120.003388
ORF3a106L106LctCctT77P.1.170.001132
ORF3a106L106FCtcTtc77P.40.026616
ORF3a106L106FCtcTtc66AY.1100.000676
ORF3a106L106LctCctT66AY.1110.001099
ORF3a106L106ICtcAtc66AY.1130.000854
ORF3a106L106LctCctT66AY.330.000401
ORF3a106L106delCTC---66AY.390.000148
ORF3a106L106PcTccCc66AY.39.10.000238
ORF3a106L106RcTccGc66AY.40.000009
ORF3a106L106LctCctG46AY.520.003257
ORF3a106L106LctCctT16AY.520.000814
ORF3a106L106LctCctA16AY.520.000814
ORF3a106L106LctCctT66AY.75.10.001082
ORF3a106L106FCtcTtc66AY.790.007264
ORF3a106L106LctCctT66AY.840.002625
ORF3a106L106LctCctT66B.1.1.10.00196
ORF3a106L106VCtcGtc66B.1.1.2140.000333
ORF3a106L106FCtcTtc66B.1.1.2140.000333
ORF3a106L106LctCctT56B.1.1.250.002843
ORF3a106L106LctCctA16B.1.1.250.000569
ORF3a106L106FCtcTtc66B.1.1.280.001867
ORF3a106L106FCtcTtc66B.1.1.3060.00263
ORF3a106L106LctCctT66B.1.177.200.009105
ORF3a106L106FCtcTtc66B.1.177.40.001266
ORF3a106L106FCtcTtc56B.1.2210.000355
ORF3a106L106FCtCTtT16B.1.2210.000071
ORF3a106L106FCtcTtc66B.1.258.170.000624
ORF3a106L106LctCctT66B.1.2810.130435
ORF3a106L106LctCctT66B.1.416.10.009375
ORF3a106L106ICtcAtc66B.1.438.10.000644
ORF3a106L106LctCctT66B.1.4730.115385
ORF3a106L106FCtcTtc66B.1.5640.002555
ORF3a106L106LctCctT66B.1.5640.002555
ORF3a106L106HcTccAc66B.1.617.20.000023
ORF3a106L106FCtcTtc66P.1.150.001394
ORF3a106L106LctCctT66P.1.150.001394
ORF3a106L106LctCctA250.111111
ORF3a106L106LCtCTtA250.111111
ORF3a106L106LctCctT150.055556
ORF3a106L106FCtcTtc55AY.1110.000916
ORF3a106L106FCtcTtc55AY.1140.001156
ORF3a106L106FCtcTtc55AY.120.20.006427
ORF3a106L106LctCctT55AY.130.000805
ORF3a106L106FCtcTtc55AY.400.004822
ORF3a106L106LctCctT55AY.46.40.000823
ORF3a106L106FCtcTtc55AY.620.002179
ORF3a106L106FCtcTtc55AY.650.002665
ORF3a106L106FCtcTtc55AY.710.002375
ORF3a106L106VCtcGtc55AY.980.000395
ORF3a106L106FCtcTtc55B0.000639
ORF3a106L106LctCctT55B.1.1.3360.083333
ORF3a106L106FCtcTtc55B.1.1.3580.172414
ORF3a106L106LctCctT55B.1.1.700.001705
ORF3a106L106delCTC---55B.1.1600.000156
ORF3a106L106PcTccCc55B.1.1770.000066
ORF3a106L106FCtcTtc55B.1.177.120.000758
ORF3a106L106LctCctT55B.1.177.230.016181
ORF3a106L106FCtcTtc55B.1.2370.024876
ORF3a106L106LctCctT55B.1.2410.004058
ORF3a106L106FCtcTtc55B.1.36.160.007123
ORF3a106L106FCtcTtc55B.1.4090.003906
ORF3a106L106RcTccGc55B.1.4110.018519
ORF3a106L106LctCctT55B.1.466.20.001956
ORF3a106L106delCTC---55B.1.5250.000566
ORF3a106L106LctCctT55B.1.5950.001305
ORF3a106L106RcTccGc55B.1.617.20.000019
ORF3a106L106delCTC---55B.1.6210.000443
ORF3a106L106delCTC---55D.20.000375
ORF3a106L106FCtcTtc55N.50.008834
ORF3a106L106FCtcTtc55Q.30.000725
ORF3a106L106PcTccCc340.166667
ORF3a106L106SCTcTCc340.166667
ORF3a106L106RcTccGc240.111111
ORF3a106L106RcTCcGA240.111111
ORF3a106L106SCTCTCT140.055556
ORF3a106L106PcTCcCT140.055556
ORF3a106L106del2CTc--c34All0.000001
ORF3a106L106del1Ctc-tc24All0
ORF3a106L106del1CtC-tT24All0
ORF3a106L106del2CTC--A14All0
ORF3a106L106VCtcGtc44AY.1030.000025
ORF3a106L106LctCctT44AY.160.001519
ORF3a106L106FCtcTtc44AY.16.10.00188
ORF3a106L106LctCctG24AY.16.10.00094
ORF3a106L106LctCctT24AY.16.10.00094
ORF3a106L106FCtcTtc44AY.270.000259
ORF3a106L106HcTccAc44AY.290.000063
ORF3a106L106PcTccCc44AY.3.10.000341
ORF3a106L106delCTC---44AY.4.20.000087
ORF3a106L106LctCctT44AY.4.40.001637
ORF3a106L106ICtcAtc44AY.430.000018
ORF3a106L106FCtcTtc44AY.46.60.000289
ORF3a106L106PcTccCc44AY.470.000124
ORF3a106L106LctCctT44AY.500.003197
ORF3a106L106LctCctT44AY.530.00115
ORF3a106L106LctCctT44AY.540.000381
ORF3a106L106FCtcTtc44AY.680.001095
ORF3a106L106LctCctA24AY.7.10.000225
ORF3a106L106LctCctT24AY.7.10.000225
ORF3a106L106FCtcTtc44AY.750.000224
ORF3a106L106FCtcTtc44AY.850.001709
ORF3a106L106LctCctT44AY.860.00332
ORF3a106L106LctCctT44AY.950.003044
ORF3a106L106PcTccCc44AY.99.20.000369
ORF3a106L106FCtcTtc44AY.99.20.000369
ORF3a106L106LctCctT34AY.99.20.000276
ORF3a106L106LctCctA14AY.99.20.000092
ORF3a106L106PcTccCc44B.10.000037
ORF3a106L106ICtcAtc34B.10.000027
ORF3a106L106ICtCAtA14B.10.000009
ORF3a106L106FCtcTtc44B.1.1.2210.040404
ORF3a106L106FCtcTtc44B.1.1.2840.00043
ORF3a106L106VCtcGtc44B.1.1.3480.003185
ORF3a106L106VCtcGtc44B.1.1.70.000004
ORF3a106L106RcTccGc44B.1.1770.000053
ORF3a106L106FCtcTtc44B.1.177.540.002426
ORF3a106L106FCtcTtc44B.1.177.560.00267
ORF3a106L106FCtcTtc44B.1.177.730.002265
ORF3a106L106FCtcTtc44B.1.177.810.000757
ORF3a106L106FCtcTtc44B.1.177.860.000734
ORF3a106L106LctCctT44B.1.2220.006768
ORF3a106L106LctCctT44B.1.2340.000528
ORF3a106L106FCtcTtc44B.1.2400.000862
ORF3a106L106LctCctT44B.1.2600.013378
ORF3a106L106FCtcTtc44B.1.36.350.010417
ORF3a106L106FCtcTtc44B.1.3690.001141
ORF3a106L106LctCctT44B.1.4650.015209
ORF3a106L106RcTccGc44B.1.5250.000453
ORF3a106L106FCtcTtc44B.1.5740.008602
ORF3a106L106FCtcTtc44B.1.5960.000349
ORF3a106L106LctCctT44B.1.617.10.000516
ORF3a106L106ICtcAtc44B.1.6210.000354
ORF3a106L106FCtcTtc44B.1.6230.002146
ORF3a106L106VCtcGtc44B.1.6370.000292
ORF3a106L106LctCctT44C.370.000464
ORF3a106L106FCtcTtc44N.30.023256
ORF3a106L106delCTC---44P.10.000063
ORF3a106L106FCtcTtc44P.1.10.001271
ORF3a106L106FCtcTtc33A.2.40.010101
ORF3a106L106CCTcTGc33All0.000001
ORF3a106L106ICtcAtc33AY.1000.000138
ORF3a106L106HcTccAc33AY.1030.000019
ORF3a106L106PcTccCc33AY.1030.000019
ORF3a106L106FCtcTtc33AY.1090.002219
ORF3a106L106LctCctT33AY.1100.000338
ORF3a106L106PcTccCc33AY.1190.000106
ORF3a106L106LctCctT33AY.20.001068
ORF3a106L106LctCctT33AY.34.10.00153
ORF3a106L106PcTccCc33AY.4.50.000322
ORF3a106L106PcTccCc33AY.420.000121
ORF3a106L106delCTC---33AY.440.000018
ORF3a106L106delCTC---33AY.470.000093
ORF3a106L106LctCctT33AY.480.001395
ORF3a106L106FCtcTtc33AY.550.002752
ORF3a106L106FCtcTtc33AY.7.10.000338
ORF3a106L106FCtcTtc33AY.75.10.000541
ORF3a106L106LctCctT33AY.790.003632
ORF3a106L106LctCctT33AY.870.002498
ORF3a106L106LctCctT33AY.9.10.000251
ORF3a106L106LctCctT23AY.920.000575
ORF3a106L106LctCctA13AY.920.000287
ORF3a106L106ICtcAtc33AY.98.10.000145
ORF3a106L106FCtcTtc33AY.990.003148
ORF3a106L106SCTCTCT23B.1.10.000036
ORF3a106L106PcTccCc23B.1.10.000036
ORF3a106L106PcTCcCT13B.1.10.000018
ORF3a106L106SCTcTCc13B.1.10.000018
ORF3a106L106LctCctT33B.1.1.1740.010135
ORF3a106L106LctCctT33B.1.1.1760.001318
ORF3a106L106LctCctT33B.1.1.1800.032258
ORF3a106L106FCtcTtc33B.1.1.2310.009288
ORF3a106L106FCtcTtc33B.1.1.250.001706
ORF3a106L106LctCctT23B.1.1.280.000622
ORF3a106L106LctCctA13B.1.1.280.000311
ORF3a106L106HcTccAc33B.1.1.70.000003
ORF3a106L106del2CTc--c33B.1.1770.00004
ORF3a106L106FCtcTtc33B.1.177.870.002183
ORF3a106L106PcTccCc33B.1.2210.000213
ORF3a106L106PcTccCc33B.1.2580.0002
ORF3a106L106LctCctT23B.1.3010.011834
ORF3a106L106LctCctA13B.1.3010.005917
ORF3a106L106LctCctT33B.1.36.10.003421
ORF3a106L106LctCctT33B.1.36.180.001261
ORF3a106L106LctCctT33B.1.36.220.003623
ORF3a106L106FCtcTtc33B.1.36.220.003623
ORF3a106L106FCtcTtc33B.1.3960.002117
ORF3a106L106LctCctT33B.1.4000.001287
ORF3a106L106LctCctT33B.1.4700.004213
ORF3a106L106FCtcTtc33B.1.5240.004219
ORF3a106L106FCtcTtc33B.1.5250.000339
ORF3a106L106LctCctT33B.1.5250.000339
ORF3a106L106LctCctT33B.1.5550.066667
ORF3a106L106LctCctT33B.1.6090.001438
ORF3a106L106FCtcTtc33B.1.6370.000219
ORF3a106L106LCtCTtG13B.1.910.002075
ORF3a106L106LctCctG13B.1.910.002075
ORF3a106L106LctCctA13B.1.910.002075
ORF3a106L106FCtcTtc33C.10.007177
ORF3a106L106VCtcGtc33P.10.000047
ORF3a106L106delCTC---33P.1.150.000697
ORF3a106L106PcTccCc33P.20.00056
ORF3a106L106FCtcTtc33Q.80.000495
ORF3a106L106RcTccGc33R.10.00027
ORF3a106L106VCtcGtc220.111111
ORF3a106L106XCTCTGA220.111111
ORF3a106L106CCTcTGc220.111111
ORF3a106L106delCTC---22AE.80.000978
ORF3a106L106XCTCTGA22All0
ORF3a106L106GCTcGGc12All0
ORF3a106L106GCTCGGA12All0
ORF3a106L106FCtcTtc22AY.100.00106
ORF3a106L106RcTccGc22AY.1020.000053
ORF3a106L106FCtcTtc22AY.1080.002205
ORF3a106L106FCtcTtc22AY.1180.000125
ORF3a106L106LctCctT22AY.120.2.10.000997
ORF3a106L106delCTC---22AY.1210.000271
ORF3a106L106FCtcTtc22AY.1210.000271
ORF3a106L106LctCctT22AY.140.000176
ORF3a106L106FCtcTtc22AY.190.002281
ORF3a106L106FCtcTtc22AY.240.000862
ORF3a106L106ICtcAtc22AY.30.00002
ORF3a106L106HcTccAc22AY.30.00002
ORF3a106L106LctCctT22AY.300.000791
ORF3a106L106FCtcTtc12AY.300.000396
ORF3a106L106FCtCTtT12AY.300.000396
ORF3a106L106LctCctT22AY.320.001065
ORF3a106L106PcTccCc22AY.360.000296
ORF3a106L106ICtcAtc22AY.390.000049
ORF3a106L106delCTC---22AY.4.50.000215
ORF3a106L106ICtcAtc22AY.420.00008
ORF3a106L106delCTC---22AY.46.60.000144
ORF3a106L106PcTccCc22AY.5.40.000553
ORF3a106L106delCTC---22AY.5.40.000553
ORF3a106L106FCtcTtc22AY.530.000575
ORF3a106L106RcTccGc22AY.550.001835
ORF3a106L106LctCctT22AY.590.001059
ORF3a106L106FCtcTtc22AY.720.002721
ORF3a106L106ICtcAtc22AY.750.000112
ORF3a106L106FCtcTtc22AY.840.000875
ORF3a106L106LctCctT22AY.850.000854
ORF3a106L106FCtcTtc22AY.9.10.000167
ORF3a106L106delCTC---22AY.9.10.000167
ORF3a106L106LctCctT22AY.930.000546
ORF3a106L106delCTC---22AY.98.10.000097
ORF3a106L106HcTccAc22B.10.000018
ORF3a106L106RcTccGc22B.1.10.000036
ORF3a106L106FCtcTtc22B.1.1.1410.004024
ORF3a106L106FCtcTtc22B.1.1.1610.007067
ORF3a106L106FCtcTtc22B.1.1.1980.002937
ORF3a106L106LctCctT22B.1.1.2200.003717
ORF3a106L106LctCctT22B.1.1.2260.011628
ORF3a106L106LctCctT22B.1.1.2490.142857
ORF3a106L106FCtcTtc22B.1.1.2770.001517
ORF3a106L106delCTC---22B.1.1.2980.001724
ORF3a106L106LctCctT22B.1.1.30.017391
ORF3a106L106VCtCGtG12B.1.1.330.000421
ORF3a106L106VCtcGtc12B.1.1.330.000421
ORF3a106L106LctCctT22B.1.1.3320.0625
ORF3a106L106FCtcTtc22B.1.1.3540.008772
ORF3a106L106LctCctT22B.1.1.370.000386
ORF3a106L106LctCctT22B.1.1.4040.031746
ORF3a106L106FCtcTtc22B.1.1.630.000772
ORF3a106L106FCtcTtc22B.1.1.700.000682
ORF3a106L106FCtCTtT22B.1.140.035088
ORF3a106L106del1CtC-tT22B.1.1600.000062
ORF3a106L106LctCctT22B.1.177.160.001329
ORF3a106L106LctCctT22B.1.177.260.013986
ORF3a106L106LctCctT12B.1.177.320.00135
ORF3a106L106LctCctG12B.1.177.320.00135
ORF3a106L106FCtcTtc22B.1.177.50.002484
ORF3a106L106LctCctT22B.1.177.500.00939
ORF3a106L106PcTccCc22B.1.177.70.00033
ORF3a106L106FCtcTtc22B.1.177.70.00033
ORF3a106L106RcTccGc22B.1.177.770.001452
ORF3a106L106LctCctT22B.1.177.810.000379
ORF3a106L106LctCctT22B.1.177.820.000955
ORF3a106L106VCtcGtc22B.1.20.000018
ORF3a106L106FCtcTtc22B.1.2060.001631
ORF3a106L106LctCctT22B.1.221.20.008032
ORF3a106L106FCtcTtc22B.1.2580.000133
ORF3a106L106FCtcTtc22B.1.258.20.009009
ORF3a106L106HcTccAc22B.1.2790.001027
ORF3a106L106delCTC---22B.1.3510.000059
ORF3a106L106delCTC---22B.1.360.000292
ORF3a106L106RcTccGc22B.1.36.180.00084
ORF3a106L106LctCctT22B.1.36.350.005208
ORF3a106L106FCtcTtc22B.1.36.80.002
ORF3a106L106LctCctT22B.1.3670.001585
ORF3a106L106LctCctT22B.1.3750.001639
ORF3a106L106LctCctT22B.1.3950.014085
ORF3a106L106FCtcTtc22B.1.3990.003868
ORF3a106L106LctCctT22B.1.4170.057143
ORF3a106L106PcTccCc22B.1.4360.002058
ORF3a106L106FCtcTtc22B.1.4560.006536
ORF3a106L106FCtcTtc22B.1.4590.008163
ORF3a106L106LctCctT22B.1.4590.008163
ORF3a106L106LctCctT22B.1.4620.014493
ORF3a106L106FCtcTtc22B.1.4700.002809
ORF3a106L106LctCctT22B.1.4710.005464
ORF3a106L106FCtcTtc22B.1.4970.00063
ORF3a106L106LctCctT22B.1.4990.002101
ORF3a106L106FCtcTtc22B.1.4990.002101
ORF3a106L106LctCctT22B.1.5330.019231
ORF3a106L106ICtcAtc12B.1.5330.009615
ORF3a106L106ICtCAtT12B.1.5330.009615
ORF3a106L106delCTC---22B.1.5820.000981
ORF3a106L106PcTccCc22B.1.617.10.000258
ORF3a106L106SCTCTCT22B.1.617.20.000008
ORF3a106L106FCtcTtc22B.1.617.30.00597
ORF3a106L106SCTcTCc22B.1.6210.000177
ORF3a106L106FCtcTtc22B.1.621.10.001012
ORF3a106L106FCtcTtc22B.1.6250.004706
ORF3a106L106LctCctT22B.1.6280.000705
ORF3a106L106FCtcTtc22B.1.6330.083333
ORF3a106L106GCTcGGc12B.1.910.002075
ORF3a106L106SCTcTCc12B.1.910.002075
ORF3a106L106VCtcGtc12B.1.910.002075
ORF3a106L106GCTCGGA12B.1.910.002075
ORF3a106L106RcTccGc12B.1.910.002075
ORF3a106L106PcTccCc12B.1.910.002075
ORF3a106L106VCtCGtA12B.1.910.002075
ORF3a106L106RcTCcGA12B.1.910.002075
ORF3a106L106PcTCcCG12B.1.910.002075
ORF3a106L106SCTCTCG12B.1.910.002075
ORF3a106L106FCtcTtc22B.30.001661
ORF3a106L106FCtcTtc22B.4.70.020202
ORF3a106L106LctCctG12B.6.60.000889
ORF3a106L106LctCctA12B.6.60.000889
ORF3a106L106FCtcTtc22C.36.30.001134
ORF3a106L106SCTCTCT22D.20.00015
ORF3a106L106PcTccCc22P.10.000032
ORF3a106L106LctCctT22P.1.10.000635
ORF3a106L106PcTccCc22P.1.70.000639
ORF3a106L106FCtcTtc22Q.20.001227
ORF3a106L106PcTccCc22Q.80.00033
ORF3a106L106PcTccCc11A0.000387
ORF3a106L106delCTC---11A0.000387
ORF3a106L106LctCctT11A0.000387
ORF3a106L106FCtcTtc11A0.000387
ORF3a106L106FCtcTtc11A.10.000282
ORF3a106L106FCtcTtc11A.110.058824
ORF3a106L106FCtcTtc11A.190.009434
ORF3a106L106LctCctT11A.230.010526
ORF3a106L106FCtcTtc11AD.20.000219
ORF3a106L106FCtcTtc11AE.80.000489
ORF3a106L106LctCctT11AF.10.037037
ORF3a106L106LctCctT11AH.30.003802
ORF3a106L106delCTC---11AH.30.003802
ORF3a106L106YCTcTAc11All0
ORF3a106L106LctCctT11AN.10.02
ORF3a106L106LctCctT11AP.10.001502
ORF3a106L106LctCctT11AQ.10.071429
ORF3a106L106FCtcTtc11AU.30.00211
ORF3a106L106delCTC---11AV.10.005051
ORF3a106L106del1Ctc-tc11AY.1000.000046
ORF3a106L106delCTC---11AY.1000.000046
ORF3a106L106VCtcGtc11AY.1020.000027
ORF3a106L106LctCctT11AY.1050.000643
ORF3a106L106delCTC---11AY.1060.000335
ORF3a106L106HcTccAc11AY.1070.000466
ORF3a106L106LctCctT11AY.1080.001103
ORF3a106L106delCTC---11AY.1080.001103
ORF3a106L106LctCctT11AY.1090.00074
ORF3a106L106delCTC---11AY.1110.000183
ORF3a106L106FCtcTtc11AY.1150.005208
ORF3a106L106ICtcAtc11AY.116.10.000311
ORF3a106L106VCtcGtc11AY.1170.000085
ORF3a106L106PcTccCc11AY.1180.000063
ORF3a106L106VCtcGtc11AY.1190.000035
ORF3a106L106FCtcTtc11AY.120.000316
ORF3a106L106LctCctT11AY.120.000316
ORF3a106L106delCTC---11AY.120.000316
ORF3a106L106LctCctT11AY.150.002222
ORF3a106L106LctCctT11AY.190.00114
ORF3a106L106PcTccCc11AY.200.000039
ORF3a106L106RcTccGc11AY.200.000039
ORF3a106L106delCTC---11AY.200.000039
ORF3a106L106delCTC---11AY.230.00007
ORF3a106L106ICtcAtc11AY.250.000006
ORF3a106L106VCtcGtc11AY.250.000006
ORF3a106L106PcTccCc11AY.260.000028
ORF3a106L106delCTC---11AY.29.10.000221
ORF3a106L106VCtcGtc11AY.30.00001
ORF3a106L106PcTccCc11AY.30.00001
ORF3a106L106delCTC---11AY.3.10.000085
ORF3a106L106FCtcTtc11AY.320.000532
ORF3a106L106VCtcGtc11AY.330.000067
ORF3a106L106delCTC---11AY.330.000067
ORF3a106L106PcTccCc11AY.340.000097
ORF3a106L106delCTC---11AY.340.000097
ORF3a106L106delCTC---11AY.34.10.00051
ORF3a106L106FCtcTtc11AY.350.000233
ORF3a106L106LctCctT11AY.370.000316
ORF3a106L106LctCctT11AY.380.000499
ORF3a106L106VCtcGtc11AY.390.000025
ORF3a106L106RcTccGc11AY.390.000025
ORF3a106L106RcTccGc11AY.4.20.000022
ORF3a106L106delCTC---11AY.4.2.10.000149
ORF3a106L106LctCctT11AY.4.30.000842
ORF3a106L106RcTccGc11AY.4.40.000409
ORF3a106L106FCtcTtc11AY.4.50.000107
ORF3a106L106LctCctT11AY.4.50.000107
ORF3a106L106LctCctT11AY.400.000964
ORF3a106L106VCtcGtc11AY.420.00004
ORF3a106L106SCTcTCc11AY.430.000004
ORF3a106L106PcTccCc11AY.440.000006
ORF3a106L106VCtcGtc11AY.450.000122
ORF3a106L106PcTccCc11AY.450.000122
ORF3a106L106PcTccCc11AY.460.000104
ORF3a106L106LctCctT11AY.46.20.000635
ORF3a106L106ICtcAtc11AY.46.60.000072
ORF3a106L106ICtcAtc11AY.470.000031
ORF3a106L106FCtcTtc11AY.490.003195
ORF3a106L106LctCctT11AY.490.003195
ORF3a106L106ICtcAtc11AY.50.000021
ORF3a106L106FCtcTtc11AY.520.000814
ORF3a106L106PcTccCc11AY.530.000288
ORF3a106L106FCtcTtc11AY.570.000656
ORF3a106L106FCtcTtc11AY.580.000907
ORF3a106L106LctCctT11AY.580.000907
ORF3a106L106FCtcTtc11AY.590.00053
ORF3a106L106VCtcGtc11AY.60.000041
ORF3a106L106LctCctT11AY.600.000938
ORF3a106L106delCTC---11AY.620.000436
ORF3a106L106FCtcTtc11AY.670.000464
ORF3a106L106PcTccCc11AY.670.000464
ORF3a106L106LctCctT11AY.680.000274
ORF3a106L106ICtcAtc11AY.680.000274
ORF3a106L106delCTC---11AY.680.000274
ORF3a106L106FCtcTtc11AY.690.000187
ORF3a106L106LctCctT11AY.700.000209
ORF3a106L106LctCctT11AY.710.000475
ORF3a106L106LctCctT11AY.720.001361
ORF3a106L106LctCctT11AY.730.000665
ORF3a106L106delCTC---11AY.730.000665
ORF3a106L106PcTccCc11AY.750.000056
ORF3a106L106ICtcAtc11AY.75.10.00018
ORF3a106L106LctCctT11AY.760.004831
ORF3a106L106LctCctT11AY.780.001541
ORF3a106L106LctCctT11AY.80.000606
ORF3a106L106FCtcTtc11AY.800.001129
ORF3a106L106FCtcTtc11AY.820.001357
ORF3a106L106RcTccGc11AY.860.00083
ORF3a106L106FCtcTtc11AY.9.2.10.001976
ORF3a106L106LctCctT11AY.900.000684
ORF3a106L106ICtcAtc11AY.910.00073
ORF3a106L106delCTC---11AY.910.00073
ORF3a106L106LctCctT11AY.960.002075
ORF3a106L106delCTC---11AY.99.20.000092
ORF3a106L106LctCctT11AZ.10.000867
ORF3a106L106FCtcTtc11AZ.50.003509
ORF3a106L106ICtcAtc11B0.000128
ORF3a106L106delCTC---11B0.000128
ORF3a106L106SCTcTCc11B.10.000009
ORF3a106L106VCtcGtc11B.10.000009
ORF3a106L106del2CTC--A11B.10.000009
ORF3a106L106delCTC---11B.1.10.000018
ORF3a106L106YCTcTAc11B.1.10.000018
ORF3a106L106delCTC---11B.1.1.1170.009709
ORF3a106L106LctCctT11B.1.1.1350.004695
ORF3a106L106LctCctT11B.1.1.1410.002012
ORF3a106L106LctCctT11B.1.1.1530.001095
ORF3a106L106FCtcTtc11B.1.1.1570.000913
ORF3a106L106FCtcTtc11B.1.1.1640.005155
ORF3a106L106FCtcTtc11B.1.1.1760.000439
ORF3a106L106FCtcTtc11B.1.1.2100.005714
ORF3a106L106FCtcTtc11B.1.1.2190.005
ORF3a106L106LctCctT11B.1.1.2270.004348
ORF3a106L106LctCctT11B.1.1.2360.006897
ORF3a106L106LctCctT11B.1.1.2630.001558
ORF3a106L106FCtcTtc11B.1.1.2940.001266
ORF3a106L106FCtcTtc11B.1.1.2970.002237
ORF3a106L106LctCctT11B.1.1.2980.000862
ORF3a106L106LctCctT11B.1.1.3040.002809
ORF3a106L106LctCctT11B.1.1.3110.000358
ORF3a106L106LctCctT11B.1.1.3120.001912
ORF3a106L106delCTC---11B.1.1.3150.008475
ORF3a106L106FCtcTtc11B.1.1.3170.000412
ORF3a106L106LctCctT11B.1.1.3180.000302
ORF3a106L106CCTcTGc11B.1.1.330.000421
ORF3a106L106LctCctT11B.1.1.3430.020833
ORF3a106L106LctCctT11B.1.1.3480.000796
ORF3a106L106FCtcTtc11B.1.1.3510.002793
ORF3a106L106FCtcTtc11B.1.1.3690.000446
ORF3a106L106ICtcAtc11B.1.1.3690.000446
ORF3a106L106LctCctT11B.1.1.3730.02381
ORF3a106L106FCtcTtc11B.1.1.3770.001381
ORF3a106L106LctCctT11B.1.1.3770.001381
ORF3a106L106FCtcTtc11B.1.1.3890.006061
ORF3a106L106PcTccCc11B.1.1.3970.002252
ORF3a106L106FCtcTtc11B.1.1.3980.003226
ORF3a106L106delCTC---11B.1.1.4090.002833
ORF3a106L106LctCctT11B.1.1.4090.002833
ORF3a106L106delCTC---11B.1.1.4100.037037
ORF3a106L106FCtcTtc11B.1.1.4110.014706
ORF3a106L106FCtcTtc11B.1.1.4160.000905
ORF3a106L106LctCctT11B.1.1.4160.000905
ORF3a106L106LctCctT11B.1.1.4200.001006
ORF3a106L106delCTC---11B.1.1.4200.001006
ORF3a106L106FCtcTtc11B.1.1.4320.001266
ORF3a106L106FCtcTtc11B.1.1.4330.001425
ORF3a106L106FCtcTtc11B.1.1.4340.000349
ORF3a106L106FCtcTtc11B.1.1.4480.002033
ORF3a106L106LctCctT11B.1.1.4640.001473
ORF3a106L106LctCctT11B.1.1.470.005348
ORF3a106L106FCtcTtc11B.1.1.470.005348
ORF3a106L106FCtcTtc11B.1.1.5070.008696
ORF3a106L106FCtcTtc11B.1.1.5180.006329
ORF3a106L106delCTC---11B.1.1.5190.00004
ORF3a106L106delCTC---11B.1.1.540.003021
ORF3a106L106FCtcTtc11B.1.1.770.041667
ORF3a106L106LctCctT11B.1.1.80.003584
ORF3a106L106FCtcTtc11B.1.1.830.00271
ORF3a106L106FCtcTtc11B.1.1.880.071429
ORF3a106L106FCtcTtc11B.1.1.890.006061
ORF3a106L106FCtcTtc11B.1.110.30.000718
ORF3a106L106FCtcTtc11B.1.1110.001175
ORF3a106L106LctCctT11B.1.1170.0125
ORF3a106L106LctCctT11B.1.1240.007812
ORF3a106L106ICtcAtc11B.1.1260.001276
ORF3a106L106LctCctT11B.1.1270.002198
ORF3a106L106VCtcGtc11B.1.1280.000635
ORF3a106L106LctCctT11B.1.1280.000635
ORF3a106L106delCTC---11B.1.1400.018868
ORF3a106L106LctCctT11B.1.1460.004237
ORF3a106L106delCTC---11B.1.1570.002985
ORF3a106L106FCtCTtT11B.1.160.160.000929
ORF3a106L106FCtCTtT11B.1.160.200.008929
ORF3a106L106delCTC---11B.1.160.230.004831
ORF3a106L106ICtcAtc11B.1.1770.000013
ORF3a106L106delCTC---11B.1.177.160.000664
ORF3a106L106delCTC---11B.1.177.180.00116
ORF3a106L106LctCctT11B.1.177.190.001431
ORF3a106L106RcTccGc11B.1.177.200.001517
ORF3a106L106FCtcTtc11B.1.177.210.000076
ORF3a106L106FCtcTtc11B.1.177.330.001645
ORF3a106L106FCtcTtc11B.1.177.430.001477
ORF3a106L106ICtcAtc11B.1.177.440.000519
ORF3a106L106LctCctT11B.1.177.510.004566
ORF3a106L106FCtcTtc11B.1.177.570.000281
ORF3a106L106LctCctT11B.1.177.60.000977
ORF3a106L106FCtcTtc11B.1.177.600.000218
ORF3a106L106delCTC---11B.1.177.620.001192
ORF3a106L106PcTccCc11B.1.177.690.001484
ORF3a106L106LctCctT11B.1.177.690.001484
ORF3a106L106FCtcTtc11B.1.177.770.000726
ORF3a106L106FCtcTtc11B.1.177.790.002342
ORF3a106L106LctCctT11B.1.177.80.000752
ORF3a106L106LctCctT11B.1.177.830.001481
ORF3a106L106LctCctT11B.1.1920.009259
ORF3a106L106LctCctT11B.1.1990.004132
ORF3a106L106RcTccGc11B.1.20.000009
ORF3a106L106delCTC---11B.1.2060.000816
ORF3a106L106PcTccCc11B.1.2060.000816
ORF3a106L106LctCctT11B.1.2100.002132
ORF3a106L106LctCctT11B.1.2140.003663
ORF3a106L106FCtcTtc11B.1.214.20.0006
ORF3a106L106LctCctT11B.1.214.20.0006
ORF3a106L106VCtcGtc11B.1.2210.000071
ORF3a106L106FCtcTtc11B.1.221.30.000833
ORF3a106L106delCTC---11B.1.2340.000132
ORF3a106L106LctCctT11B.1.2350.002519
ORF3a106L106LctCctT11B.1.2360.002053
ORF3a106L106LctCctT11B.1.2370.004975
ORF3a106L106FCtcTtc11B.1.2390.001221
ORF3a106L106FCtcTtc11B.1.2410.000812
ORF3a106L106HcTccAc11B.1.2430.00007
ORF3a106L106delCTC---11B.1.2430.00007
ORF3a106L106del1Ctc-tc11B.1.258.100.011364
ORF3a106L106FCtcTtc11B.1.2600.003344
ORF3a106L106LctCctT11B.1.2680.010417
ORF3a106L106LctCctT11B.1.2790.000514
ORF3a106L106LctCctT11B.1.3240.001605
ORF3a106L106LctCctT11B.1.3330.010526
ORF3a106L106ICtCAtT11B.1.3330.010526
ORF3a106L106FCtCTtT11B.1.3330.010526
ORF3a106L106LctCctT11B.1.3400.004292
ORF3a106L106PcTccCc11B.1.3490.000715
ORF3a106L106LctCctT11B.1.3490.000715
ORF3a106L106FCtcTtc11B.1.351.20.000303
ORF3a106L106LctCctT11B.1.36.100.004785
ORF3a106L106FCtcTtc11B.1.36.250.002208
ORF3a106L106FCtcTtc11B.1.36.310.001751
ORF3a106L106FCtcTtc11B.1.36.390.002217
ORF3a106L106LctCctT11B.1.3620.001541
ORF3a106L106FCtcTtc11B.1.3620.001541
ORF3a106L106LctCctT11B.1.3690.000285
ORF3a106L106delCTC---11B.1.3750.00082
ORF3a106L106LctCctT11B.1.3770.004566
ORF3a106L106FCtcTtc11B.1.3800.006623
ORF3a106L106FCtcTtc11B.1.3810.007812
ORF3a106L106FCtcTtc11B.1.3980.002976
ORF3a106L106LctCctT11B.1.4080.00369
ORF3a106L106LctCctT11B.1.4160.001269
ORF3a106L106delCTC---11B.1.416.10.001563
ORF3a106L106LctCctT11B.1.4230.010204
ORF3a106L106LctCctT11B.1.4280.00102
ORF3a106L106FCtcTtc11B.1.4280.00102
ORF3a106L106delCTC---11B.1.4290.000024
ORF3a106L106ICtcAtc11B.1.4290.000024
ORF3a106L106FCtcTtc11B.1.4320.011236
ORF3a106L106FCtcTtc11B.1.438.10.000107
ORF3a106L106LctCctT11B.1.438.10.000107
ORF3a106L106LctCctT11B.1.4520.013699
ORF3a106L106FCtcTtc11B.1.4620.007246
ORF3a106L106FCtcTtc11B.1.4660.023256
ORF3a106L106FCtcTtc11B.1.466.20.000391
ORF3a106L106ICtcAtc11B.1.466.20.000391
ORF3a106L106LctCctT11B.1.4680.005714
ORF3a106L106LctCctT11B.1.4740.001901
ORF3a106L106LctCctT11B.1.4780.011765
ORF3a106L106LctCctT11B.1.4850.014925
ORF3a106L106FCtcTtc11B.1.4910.052632
ORF3a106L106LctCctT11B.1.4970.000315
ORF3a106L106LctCctT11B.1.4980.020408
ORF3a106L106FCtcTtc11B.1.5030.002488
ORF3a106L106FCtcTtc11B.1.5110.034483
ORF3a106L106LctCctT11B.1.5170.000427
ORF3a106L106LctCctT11B.1.5470.02439
ORF3a106L106LctCctT11B.1.5600.00463
ORF3a106L106PcTccCc11B.1.5640.000426
ORF3a106L106LctCctT11B.1.5670.003333
ORF3a106L106FCtcTtc11B.1.5760.000907
ORF3a106L106FCtcTtc11B.1.5770.000687
ORF3a106L106FCtcTtc11B.1.5820.000491
ORF3a106L106LctCctT11B.1.5820.000491
ORF3a106L106LctCctT11B.1.5870.001898
ORF3a106L106LctCctT11B.1.5890.007576
ORF3a106L106LctCctT11B.1.5900.004545
ORF3a106L106FCtcTtc11B.1.5950.000261
ORF3a106L106RcTccGc11B.1.5950.000261
ORF3a106L106delCTC---11B.1.5960.000087
ORF3a106L106FCtcTtc11B.1.5970.00463
ORF3a106L106LctCctT11B.1.6000.005848
ORF3a106L106delCTC---11B.1.617.10.000129
ORF3a106L106RcTccGc11B.1.617.10.000129
ORF3a106L106VCtcGtc11B.1.6210.000089
ORF3a106L106PcTccCc11B.1.6210.000089
ORF3a106L106LctCctT11B.1.621.10.000506
ORF3a106L106LctCctA11B.1.6230.000536
ORF3a106L106FCtcTtc11B.1.6340.003425
ORF3a106L106HcTccAc11B.1.6370.000073
ORF3a106L106delCTC---11B.1.6380.052632
ORF3a106L106LctCctT11B.1.780.008547
ORF3a106L106FCtcTtc11B.1.910.002075
ORF3a106L106LctCctT11B.3.10.001658
ORF3a106L106ICtcAtc11B.3.10.001658
ORF3a106L106FCtcTtc11B.40.002208
ORF3a106L106FCtcTtc11B.400.000364
ORF3a106L106LctCctT11B.400.000364
ORF3a106L106LctCctT11B.550.00295
ORF3a106L106PcTccCc11B.6.60.000889
ORF3a106L106LctCctT11B.6.80.008264
ORF3a106L106FCtcTtc11C.120.007194
ORF3a106L106LctCctT11C.340.037037
ORF3a106L106LctCctT11C.36.3.10.002717
ORF3a106L106PcTccCc11C.370.000116
ORF3a106L106ICtcAtc11C.370.000116
ORF3a106L106VCtcGtc11C.60.037037
ORF3a106L106FCtcTtc11N.20.038462
ORF3a106L106FCtcTtc11N.40.004255
ORF3a106L106ICtcAtc11P.10.000016
ORF3a106L106HcTccAc11P.10.000016
ORF3a106L106ICtcAtc11P.1.10.000318
ORF3a106L106FCtcTtc11P.1.100.000269
ORF3a106L106LctCctT11P.1.120.000484
ORF3a106L106FCtcTtc11P.1.130.000898
ORF3a106L106PcTccCc11P.1.140.000048
ORF3a106L106LctCctT11P.1.20.001156
ORF3a106L106FCtcTtc11P.1.70.000319
ORF3a106L106LctCctT11P.30.001595
ORF3a106L106LctCctG11P.60.003145
ORF3a106L106delCTC---11Q.10.000126
ORF3a106L106delCTC---11Q.40.000455
ORF3a106L106FCtcTtc11R.10.00009
ORF3a106L106delCTC---11U.30.003861