CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 104 & Codon = Tct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a104P104SnonsynCctTct32762327570.99984725702-25704

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a104P104SCctTct3275732762All0.006265
ORF3a104P104SCctTct2444624446AY.1030.151787
ORF3a104P104SCctTct26532653B.1.1.70.002375
ORF3a104P104SCctTct22652265AY.240.976293
ORF3a104P104SCctTct13921392B.1.617.20.005241
ORF3a104P104SCctTct528528AY.40.000822
ORF3a104P104SCctTct156156AY.1080.171996
ORF3a104P104SCctTct141141AY.60.005799
ORF3a104P104SCctTct8989AY.430.000394
ORF3a104P104SCctTct8787AY.250.000523
ORF3a104P104SCctTct8585B.1.2580.005656
ORF3a104P104SCctTct8282B.10.000751
ORF3a104P104SCctTct7474B.1.20.000652
ORF3a104P104SCctTct5454AY.440.000329
ORF3a104P104SCctTct4444B.1.1600.001372
ORF3a104P104SCctTct3434AY.330.00227
ORF3a104P104SCctTct3333B.1.1770.000435
ORF3a104P104SCctTct2626AY.1170.002197
ORF3a104P104SCctTct2626C.370.003018
ORF3a104P104SCctTct2626P.10.00041
ORF3a104P104SCctTct2424AY.30.000239
ORF3a104P104SCctTct1616B.1.10.00029
ORF3a104P104SCctTct1515Q.80.002474
ORF3a104P104SCctTct1313AY.200.000505
ORF3a104P104SCctTct1212AY.620.005229
ORF3a104P104SCctTct1111AY.260.000311
ORF3a104P104SCctTct1111AY.50.000227
ORF3a104P104SCctTct1111B.1.258.170.001144
ORF3a104P104SCctTct1111B.1.5960.000959
ORF3a104P104SCctTct1010B.1.6370.000731
ORF3a104P104SCctTct1010Q.10.001263
ORF3a104P104SCctTct99AY.230.000628
ORF3a104P104SCctTct99AY.370.002845
ORF3a104P104SCctTct99B.1.264.10.428571
ORF3a104P104SCctTct99B.1.3510.000268
ORF3a104P104SCctTct99B.1.4270.000454
ORF3a104P104SCctTct88AY.1180.000501
ORF3a104P104SCctTct88AY.90.000541
ORF3a104P104SCctTct88B.1.1.5190.000318
ORF3a104P104SCctTct88B.1.2370.039801
ORF3a104P104SCctTct88B.1.6210.000708
ORF3a104P104SCctTct470.222222
ORF3a104P104SCctTct77AY.1190.000247
ORF3a104P104SCctTct77AY.450.000852
ORF3a104P104SCctTct77B.1.1.250.00398
ORF3a104P104SCctTct77B.1.4290.000165
ORF3a104P104SCctTct77B.1.5260.000165
ORF3a104P104SCctTct66B.1.1.2160.005343
ORF3a104P104SCctTct66B.1.360.000875
ORF3a104P104SCctTct55AY.4.2.10.000745
ORF3a104P104SCctTct55AY.600.00469
ORF3a104P104SCctTct55AY.700.001043
ORF3a104P104SCctTct55AY.98.10.000242
ORF3a104P104SCctTct55B0.000639
ORF3a104P104SCctTct55B.1.6090.002397
ORF3a104P104SCctTct55P.1.120.00242
ORF3a104P104SCctTct55Q.30.000725
ORF3a104P104SCctTct44AY.1160.001147
ORF3a104P104SCctTct44AY.130.000644
ORF3a104P104SCctTct44AY.390.000099
ORF3a104P104SCctTct44AY.4.20.000087
ORF3a104P104SCctTct44AY.420.000161
ORF3a104P104SCctTct44AY.460.000416
ORF3a104P104SCctTct44AY.470.000124
ORF3a104P104SCctTct44B.1.1.2630.006231
ORF3a104P104SCctTct44B.1.177.400.020619
ORF3a104P104SCctTct44B.1.2340.000528
ORF3a104P104SCctTct44B.1.5250.000453
ORF3a104P104SCctTct24B.1.910.004149
ORF3a104P104SCctTct44P.1.150.000929
ORF3a104P104SCctTct33AY.1130.000427
ORF3a104P104SCctTct33AY.320.001597
ORF3a104P104SCctTct33AY.340.000291
ORF3a104P104SCctTct33AY.670.001393
ORF3a104P104SCctTct33AY.750.000168
ORF3a104P104SCctTct33AY.9.20.00011
ORF3a104P104SCctTct33AY.920.000862
ORF3a104P104SCctTct33B.1.1.1890.004539
ORF3a104P104SCctTct33B.1.36.270.00229
ORF3a104P104SCctTct33B.1.5750.00091
ORF3a104P104SCctTct33C.140.012987
ORF3a104P104SCctTct33P.1.10.000953
ORF3a104P104SCctTct33P.1.140.000143
ORF3a104P104SCctTct33P.1.20.003468
ORF3a104P104SCctTct33P.20.00056
ORF3a104P104SCctTct22AY.46.40.000329
ORF3a104P104SCctTct22AY.570.001312
ORF3a104P104SCctTct22AY.580.001815
ORF3a104P104SCctTct22AY.740.000231
ORF3a104P104SCctTct22AY.980.000158
ORF3a104P104SCctTct22AY.99.20.000184
ORF3a104P104SCctTct22B.1.1.2140.000111
ORF3a104P104SCctTct22B.1.1.3170.000823
ORF3a104P104SCctTct22B.1.1.390.001019
ORF3a104P104SCctTct22B.1.177.570.000562
ORF3a104P104SCctTct22B.1.177.830.002963
ORF3a104P104SCctTct22B.1.2210.000142
ORF3a104P104SCctTct22B.1.3690.00057
ORF3a104P104SCctTct22B.1.4510.016393
ORF3a104P104SCctTct22B.1.621.10.001012
ORF3a104P104SCctTct22B.520.020202
ORF3a104P104SCctTct22C.350.001548
ORF3a104P104SCctTct22P.1.100.000539
ORF3a104P104SCctTct11A.120.166667
ORF3a104P104SCctTct11A.2.5.10.004808
ORF3a104P104SCctTct11AD.20.000219
ORF3a104P104SCctTct11AM.10.111111
ORF3a104P104SCctTct11AY.1000.000046
ORF3a104P104SCctTct11AY.1010.00049
ORF3a104P104SCctTct11AY.116.10.000311
ORF3a104P104SCctTct11AY.160.00038
ORF3a104P104SCctTct11AY.29.10.000221
ORF3a104P104SCctTct11AY.350.000233
ORF3a104P104SCctTct11AY.39.10.00004
ORF3a104P104SCctTct11AY.4.30.000842
ORF3a104P104SCctTct11AY.46.60.000072
ORF3a104P104SCctTct11AY.480.000465
ORF3a104P104SCctTct11AY.5.30.000337
ORF3a104P104SCctTct11AY.530.000288
ORF3a104P104SCctTct11AY.540.000095
ORF3a104P104SCctTct11AY.610.000105
ORF3a104P104SCctTct11AY.630.000387
ORF3a104P104SCctTct11AY.690.000187
ORF3a104P104SCctTct11AY.75.10.00018
ORF3a104P104SCctTct11AY.840.000437
ORF3a104P104SCctTct11AY.860.00083
ORF3a104P104SCctTct11AY.910.00073
ORF3a104P104SCctTct11AY.950.000761
ORF3a104P104SCctTct11B.1.1.1710.003676
ORF3a104P104SCctTct11B.1.1.2070.001182
ORF3a104P104SCctTct11B.1.1.2220.000204
ORF3a104P104SCctTct11B.1.1.3110.000358
ORF3a104P104SCctTct11B.1.1.3120.001912
ORF3a104P104SCctTct11B.1.1.3290.003846
ORF3a104P104SCctTct11B.1.1.3440.010753
ORF3a104P104SCctTct11B.1.1.3510.002793
ORF3a104P104SCctTct11B.1.1.3850.004464
ORF3a104P104SCctTct11B.1.1.470.005348
ORF3a104P104SCctTct11B.1.1.5150.02
ORF3a104P104SCctTct11B.1.1150.021739
ORF3a104P104SCctTct11B.1.160.250.011111
ORF3a104P104SCctTct11B.1.177.410.0025
ORF3a104P104SCctTct11B.1.177.440.000519
ORF3a104P104SCctTct11B.1.177.750.001041
ORF3a104P104SCctTct11B.1.258.110.000396
ORF3a104P104SCctTct11B.1.258.120.007874
ORF3a104P104SCctTct11B.1.3360.002439
ORF3a104P104SCctTct11B.1.3670.000792
ORF3a104P104SCctTct11B.1.3910.001127
ORF3a104P104SCctTct11B.1.3990.001934
ORF3a104P104SCctTct11B.1.4090.000781
ORF3a104P104SCctTct11B.1.4220.000812
ORF3a104P104SCctTct11B.1.438.10.000107
ORF3a104P104SCctTct11B.1.466.20.000391
ORF3a104P104SCctTct11B.1.4700.001404
ORF3a104P104SCctTct11B.1.4990.00105
ORF3a104P104SCctTct11B.1.5550.022222
ORF3a104P104SCctTct11B.1.5650.00081
ORF3a104P104SCctTct11B.1.5800.004065
ORF3a104P104SCctTct11B.1.5820.000491
ORF3a104P104SCctTct11B.1.5950.000261
ORF3a104P104SCctTct11B.1.617.10.000129
ORF3a104P104SCctTct11B.1.6200.000946
ORF3a104P104SCctTct11B.1.6310.003367
ORF3a104P104SCctTct11C.36.30.000567
ORF3a104P104SCctTct11C.390.018868
ORF3a104P104SCctTct11P.1.170.000162
ORF3a104P104SCctTct11R.10.00009