CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF3a | 103 | A103T | nonsyn | Gcc | Acc | 4015 | 4014 | 0.999751 | 25699-25701 | |
ORF3a | 103 | A103T | nonsyn | GcC | AcA | 4015 | 1 | 0.000249066 | 25699-25701 | |
ORF3a | 103 | A103S | nonsyn | Gcc | Tcc | 2491 | 2405 | 0.965476 | 25699-25701 | |
ORF3a | 103 | A103S | nonsyn | GcC | TcA | 2491 | 78 | 0.0313127 | 25699-25701 | |
ORF3a | 103 | A103S | nonsyn | GcC | TcT | 2491 | 6 | 0.00240867 | 25699-25701 | |
ORF3a | 103 | A103S | nonsyn | GCc | AGc | 2491 | 1 | 0.000401445 | 25699-25701 | |
ORF3a | 103 | A103S | nonsyn | GcC | TcG | 2491 | 1 | 0.000401445 | 25699-25701 | |
ORF3a | 103 | A103A | syn | gcC | gcT | 1253 | 1185 | 0.94573 | 25699-25701 | |
ORF3a | 103 | A103A | syn | gcC | gcA | 1253 | 62 | 0.0494812 | 25699-25701 | |
ORF3a | 103 | A103A | syn | gcC | gcG | 1253 | 6 | 0.00478851 | 25699-25701 | |
ORF3a | 103 | A103V | nonsyn | gCc | gTc | 864 | 859 | 0.994213 | 25699-25701 | |
ORF3a | 103 | A103V | nonsyn | gCC | gTT | 864 | 2 | 0.00231481 | 25699-25701 | |
ORF3a | 103 | A103V | nonsyn | gCC | gTG | 864 | 2 | 0.00231481 | 25699-25701 | |
ORF3a | 103 | A103V | nonsyn | gCC | gTA | 864 | 1 | 0.00115741 | 25699-25701 | |
ORF3a | 103 | A103P | nonsyn | Gcc | Ccc | 187 | 185 | 0.989305 | 25699-25701 | |
ORF3a | 103 | A103P | nonsyn | GcC | CcA | 187 | 2 | 0.0106952 | 25699-25701 | |
ORF3a | 103 | A103del | del | GCC | --- | 145 | 145 | 1 | 25699-25701 | |
ORF3a | 103 | A103D | nonsyn | gCc | gAc | 114 | 114 | 1 | 25699-25701 | |
ORF3a | 103 | A103del1 | del | gCc | g-c | 9 | 6 | 0.666667 | 25699-25701 | |
ORF3a | 103 | A103del1 | del | Gcc | -cc | 9 | 2 | 0.222222 | 25699-25701 | |
ORF3a | 103 | A103del1 | del | GCc | A-c | 9 | 1 | 0.111111 | 25699-25701 | |
ORF3a | 103 | A103F | nonsyn | GCc | TTc | 8 | 6 | 0.75 | 25699-25701 | |
ORF3a | 103 | A103F | nonsyn | GCC | TTT | 8 | 2 | 0.25 | 25699-25701 | |
ORF3a | 103 | A103G | nonsyn | gCc | gGc | 6 | 6 | 1 | 25699-25701 | |
ORF3a | 103 | A103I | nonsyn | GCc | ATc | 5 | 3 | 0.6 | 25699-25701 | |
ORF3a | 103 | A103I | nonsyn | GCC | ATT | 5 | 1 | 0.2 | 25699-25701 | |
ORF3a | 103 | A103I | nonsyn | GCC | ATA | 5 | 1 | 0.2 | 25699-25701 | |
ORF3a | 103 | A103C | nonsyn | GCc | TGc | 2 | 2 | 1 | 25699-25701 | |
ORF3a | 103 | A103N | nonsyn | GCc | AAc | 2 | 2 | 1 | 25699-25701 | |
ORF3a | 103 | A103del2 | del | GCC | --N | 2 | 1 | 0.5 | 25699-25701 | |
ORF3a | 103 | A103del2 | del | GCc | --c | 2 | 1 | 0.5 | 25699-25701 | |
ORF3a | 103 | A103Y | nonsyn | GCc | TAc | 1 | 1 | 1 | 25699-25701 | |
ORF3a | 103 | A103X | nonsyn | GCC | TAA | 1 | 1 | 1 | 25699-25701 | |
ORF3a | 103 | A103E | nonsyn | gCC | gAA | 1 | 1 | 1 | 25699-25701 | |
ORF3a | 103 | A103L | nonsyn | GCC | CTT | 1 | 1 | 1 | 25699-25701 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF3a | 103 | A103T | Gcc | Acc | 4014 | 4015 | All | 0.000768 |
ORF3a | 103 | A103T | GcC | AcA | 1 | 4015 | All | 0 |
ORF3a | 103 | A103T | Gcc | Acc | 2736 | 2736 | AY.43 | 0.012122 |
ORF3a | 103 | A103S | Gcc | Tcc | 2405 | 2491 | All | 0.00046 |
ORF3a | 103 | A103S | GcC | TcA | 78 | 2491 | All | 0.000015 |
ORF3a | 103 | A103S | GcC | TcT | 6 | 2491 | All | 0.000001 |
ORF3a | 103 | A103S | GCc | AGc | 1 | 2491 | All | 0 |
ORF3a | 103 | A103S | GcC | TcG | 1 | 2491 | All | 0 |
ORF3a | 103 | A103A | gcC | gcT | 1185 | 1253 | All | 0.000227 |
ORF3a | 103 | A103A | gcC | gcA | 62 | 1253 | All | 0.000012 |
ORF3a | 103 | A103A | gcC | gcG | 6 | 1253 | All | 0.000001 |
ORF3a | 103 | A103V | gCc | gTc | 859 | 864 | All | 0.000164 |
ORF3a | 103 | A103V | gCC | gTG | 2 | 864 | All | 0 |
ORF3a | 103 | A103V | gCC | gTT | 2 | 864 | All | 0 |
ORF3a | 103 | A103V | gCC | gTA | 1 | 864 | All | 0 |
ORF3a | 103 | A103T | Gcc | Acc | 770 | 770 | B.1.1.519 | 0.030577 |
ORF3a | 103 | A103S | Gcc | Tcc | 650 | 651 | B.1.1.7 | 0.000582 |
ORF3a | 103 | A103S | GcC | TcT | 1 | 651 | B.1.1.7 | 0.000001 |
ORF3a | 103 | A103V | gCc | gTc | 493 | 493 | B.1.1.7 | 0.000441 |
ORF3a | 103 | A103A | gcC | gcT | 320 | 320 | AY.29 | 0.005048 |
ORF3a | 103 | A103S | Gcc | Tcc | 270 | 271 | B.1.617.2 | 0.001017 |
ORF3a | 103 | A103S | GcC | TcA | 1 | 271 | B.1.617.2 | 0.000004 |
ORF3a | 103 | A103S | Gcc | Tcc | 189 | 264 | AY.4 | 0.000294 |
ORF3a | 103 | A103S | GcC | TcA | 75 | 264 | AY.4 | 0.000117 |
ORF3a | 103 | A103S | Gcc | Tcc | 215 | 217 | AY.43 | 0.000953 |
ORF3a | 103 | A103S | GCc | AGc | 1 | 217 | AY.43 | 0.000004 |
ORF3a | 103 | A103S | GcC | TcG | 1 | 217 | AY.43 | 0.000004 |
ORF3a | 103 | A103P | Gcc | Ccc | 185 | 187 | All | 0.000035 |
ORF3a | 103 | A103P | GcC | CcA | 2 | 187 | All | 0 |
ORF3a | 103 | A103A | gcC | gcT | 142 | 148 | B.1.1.7 | 0.000127 |
ORF3a | 103 | A103A | gcC | gcA | 5 | 148 | B.1.1.7 | 0.000004 |
ORF3a | 103 | A103A | gcC | gcG | 1 | 148 | B.1.1.7 | 0.000001 |
ORF3a | 103 | A103del | GCC | --- | 145 | 145 | All | 0.000028 |
ORF3a | 103 | A103D | gCc | gAc | 114 | 114 | All | 0.000022 |
ORF3a | 103 | A103T | Gcc | Acc | 102 | 102 | B.1.1.365 | 0.569832 |
ORF3a | 103 | A103A | gcC | gcT | 98 | 98 | B.1.1.28 | 0.030501 |
ORF3a | 103 | A103T | Gcc | Acc | 94 | 94 | B.1.617.2 | 0.000354 |
ORF3a | 103 | A103A | gcC | gcT | 93 | 94 | B.1.617.2 | 0.00035 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 94 | B.1.617.2 | 0.000004 |
ORF3a | 103 | A103S | Gcc | Tcc | 82 | 82 | AY.5 | 0.001693 |
ORF3a | 103 | A103S | Gcc | Tcc | 75 | 75 | AY.25 | 0.000451 |
ORF3a | 103 | A103S | Gcc | Tcc | 65 | 67 | P.1 | 0.001024 |
ORF3a | 103 | A103S | GcC | TcT | 2 | 67 | P.1 | 0.000032 |
ORF3a | 103 | A103S | Gcc | Tcc | 63 | 63 | AY.102 | 0.00167 |
ORF3a | 103 | A103T | Gcc | Acc | 60 | 60 | B.1.1.7 | 0.000054 |
ORF3a | 103 | A103S | Gcc | Tcc | 58 | 58 | B.1.2 | 0.000511 |
ORF3a | 103 | A103S | Gcc | Tcc | 56 | 56 | B.1.243 | 0.003897 |
ORF3a | 103 | A103V | gCc | gTc | 53 | 53 | P.1 | 0.000835 |
ORF3a | 103 | A103A | gcC | gcT | 48 | 49 | AY.4 | 0.000075 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 49 | AY.4 | 0.000002 |
ORF3a | 103 | A103S | Gcc | Tcc | 47 | 47 | AY.119 | 0.001659 |
ORF3a | 103 | A103S | Gcc | Tcc | 40 | 40 | AY.44 | 0.000243 |
ORF3a | 103 | A103D | gCc | gAc | 38 | 38 | AY.43 | 0.000168 |
ORF3a | 103 | A103del | GCC | --- | 38 | 38 | B.1.1.7 | 0.000034 |
ORF3a | 103 | A103S | Gcc | Tcc | 37 | 37 | B.1.177.41 | 0.0925 |
ORF3a | 103 | A103P | Gcc | Ccc | 37 | 37 | B.1.617.2 | 0.000139 |
ORF3a | 103 | A103A | gcC | gcT | 34 | 34 | B.1.1.70 | 0.011596 |
ORF3a | 103 | A103A | gcC | gcT | 34 | 34 | B.1.243 | 0.002366 |
ORF3a | 103 | A103S | Gcc | Tcc | 33 | 33 | B.1.1.306 | 0.014467 |
ORF3a | 103 | A103V | gCc | gTc | 30 | 30 | AY.25 | 0.00018 |
ORF3a | 103 | A103S | Gcc | Tcc | 30 | 30 | AY.39 | 0.000741 |
ORF3a | 103 | A103V | gCc | gTc | 30 | 30 | B.1.617.2 | 0.000113 |
ORF3a | 103 | A103A | gcC | gcT | 29 | 29 | AY.103 | 0.00018 |
ORF3a | 103 | A103S | Gcc | Tcc | 27 | 27 | AY.75 | 0.001513 |
ORF3a | 103 | A103A | gcC | gcT | 27 | 27 | B.1.258 | 0.001797 |
ORF3a | 103 | A103A | gcC | gcT | 25 | 25 | AY.43 | 0.000111 |
ORF3a | 103 | A103P | Gcc | Ccc | 24 | 25 | B.1.1.7 | 0.000021 |
ORF3a | 103 | A103P | GcC | CcA | 1 | 25 | B.1.1.7 | 0.000001 |
ORF3a | 103 | A103S | Gcc | Tcc | 24 | 24 | AY.20 | 0.000933 |
ORF3a | 103 | A103A | gcC | gcA | 15 | 24 | B.1.36 | 0.002189 |
ORF3a | 103 | A103A | gcC | gcT | 9 | 24 | B.1.36 | 0.001313 |
ORF3a | 103 | A103S | Gcc | Tcc | 23 | 23 | AY.33 | 0.001536 |
ORF3a | 103 | A103S | Gcc | Tcc | 23 | 23 | AY.4.2 | 0.000499 |
ORF3a | 103 | A103S | Gcc | Tcc | 21 | 23 | B.1 | 0.000192 |
ORF3a | 103 | A103S | GcC | TcA | 1 | 23 | B.1 | 0.000009 |
ORF3a | 103 | A103S | GcC | TcT | 1 | 23 | B.1 | 0.000009 |
ORF3a | 103 | A103S | Gcc | Tcc | 22 | 22 | AY.4.5 | 0.002365 |
ORF3a | 103 | A103T | Gcc | Acc | 21 | 21 | AY.4 | 0.000033 |
ORF3a | 103 | A103A | gcC | gcT | 21 | 21 | B.1.596 | 0.00183 |
ORF3a | 103 | A103V | gCc | gTc | 20 | 20 | AY.4 | 0.000031 |
ORF3a | 103 | A103A | gcC | gcT | 17 | 20 | B.1 | 0.000156 |
ORF3a | 103 | A103A | gcC | gcA | 3 | 20 | B.1 | 0.000027 |
ORF3a | 103 | A103A | gcC | gcT | 10 | 20 | B.1.177 | 0.000132 |
ORF3a | 103 | A103A | gcC | gcA | 10 | 20 | B.1.177 | 0.000132 |
ORF3a | 103 | A103V | gCc | gTc | 20 | 20 | B.1.2 | 0.000176 |
ORF3a | 103 | A103T | Gcc | Acc | 20 | 20 | B.1.240 | 0.004311 |
ORF3a | 103 | A103A | gcC | gcT | 20 | 20 | B.1.429 | 0.000471 |
ORF3a | 103 | A103P | Gcc | Ccc | 19 | 19 | B.1.232 | 0.01021 |
ORF3a | 103 | A103S | Gcc | Tcc | 18 | 18 | B.1.351 | 0.000535 |
ORF3a | 103 | A103S | Gcc | Tcc | 17 | 17 | B.1.429 | 0.0004 |
ORF3a | 103 | A103T | Gcc | Acc | 16 | 16 | AY.102 | 0.000424 |
ORF3a | 103 | A103V | gCc | gTc | 16 | 16 | P.1.10 | 0.004312 |
ORF3a | 103 | A103A | gcC | gcT | 9 | 15 | AY.25 | 0.000054 |
ORF3a | 103 | A103A | gcC | gcA | 6 | 15 | AY.25 | 0.000036 |
ORF3a | 103 | A103D | gCc | gAc | 15 | 15 | AY.3 | 0.000149 |
ORF3a | 103 | A103V | gCc | gTc | 15 | 15 | AY.4.2 | 0.000325 |
ORF3a | 103 | A103A | gcC | gcT | 15 | 15 | B.1.351 | 0.000446 |
ORF3a | 103 | A103A | gcC | gcT | 15 | 15 | C.36 | 0.013661 |
ORF3a | 103 | A103A | gcC | gcT | 14 | 14 | B.1.1 | 0.000254 |
ORF3a | 103 | A103A | gcC | gcT | 14 | 14 | P.1 | 0.000221 |
ORF3a | 103 | A103P | Gcc | Ccc | 13 | 13 | AY.25 | 0.000078 |
ORF3a | 103 | A103S | Gcc | Tcc | 13 | 13 | AY.3 | 0.000129 |
ORF3a | 103 | A103V | gCc | gTc | 13 | 13 | B.1 | 0.000119 |
ORF3a | 103 | A103S | Gcc | Tcc | 13 | 13 | B.1.160 | 0.000405 |
ORF3a | 103 | A103del | GCC | --- | 13 | 13 | B.1.177 | 0.000171 |
ORF3a | 103 | A103D | gCc | gAc | 13 | 13 | B.1.617.2 | 0.000049 |
ORF3a | 103 | A103S | Gcc | Tcc | 12 | 12 | AY.88 | 0.01061 |
ORF3a | 103 | A103T | Gcc | Acc | 12 | 12 | B.1 | 0.00011 |
ORF3a | 103 | A103del | GCC | --- | 12 | 12 | B.1 | 0.00011 |
ORF3a | 103 | A103V | gCc | gTc | 12 | 12 | B.1.177 | 0.000158 |
ORF3a | 103 | A103S | Gcc | Tcc | 12 | 12 | B.1.177.4 | 0.002533 |
ORF3a | 103 | A103T | Gcc | Acc | 12 | 12 | B.1.2 | 0.000106 |
ORF3a | 103 | A103A | gcC | gcT | 12 | 12 | B.1.2 | 0.000106 |
ORF3a | 103 | A103T | Gcc | Acc | 11 | 11 | B.1.429 | 0.000259 |
ORF3a | 103 | A103V | gCc | gTc | 11 | 11 | N.5 | 0.019435 |
ORF3a | 103 | A103T | Gcc | Acc | 10 | 10 | AY.34 | 0.00097 |
ORF3a | 103 | A103V | gCc | gTc | 9 | 10 | B.1.221 | 0.000639 |
ORF3a | 103 | A103V | gCC | gTT | 1 | 10 | B.1.221 | 0.000071 |
ORF3a | 103 | A103del1 | gCc | g-c | 6 | 9 | All | 0.000001 |
ORF3a | 103 | A103del1 | Gcc | -cc | 2 | 9 | All | 0 |
ORF3a | 103 | A103del1 | GCc | A-c | 1 | 9 | All | 0 |
ORF3a | 103 | A103S | Gcc | Tcc | 9 | 9 | AY.117 | 0.000761 |
ORF3a | 103 | A103A | gcC | gcT | 9 | 9 | B.1.595 | 0.002349 |
ORF3a | 103 | A103A | gcC | gcT | 9 | 9 | B.33 | 0.191489 |
ORF3a | 103 | A103F | GCc | TTc | 6 | 8 | All | 0.000001 |
ORF3a | 103 | A103F | GCC | TTT | 2 | 8 | All | 0 |
ORF3a | 103 | A103V | gCc | gTc | 8 | 8 | AY.102 | 0.000212 |
ORF3a | 103 | A103T | Gcc | Acc | 8 | 8 | AY.25 | 0.000048 |
ORF3a | 103 | A103T | Gcc | Acc | 8 | 8 | AY.39 | 0.000198 |
ORF3a | 103 | A103T | Gcc | Acc | 8 | 8 | AY.44 | 0.000049 |
ORF3a | 103 | A103T | Gcc | Acc | 8 | 8 | AY.99.2 | 0.000737 |
ORF3a | 103 | A103S | Gcc | Tcc | 8 | 8 | B.1.1 | 0.000145 |
ORF3a | 103 | A103S | Gcc | Tcc | 8 | 8 | B.1.1.44 | 0.019277 |
ORF3a | 103 | A103P | Gcc | Ccc | 8 | 8 | B.1.1.519 | 0.000318 |
ORF3a | 103 | A103S | Gcc | Tcc | 8 | 8 | C.37 | 0.000929 |
ORF3a | 103 | A103S | Gcc | Tcc | 7 | 7 | AY.103 | 0.000043 |
ORF3a | 103 | A103S | Gcc | Tcc | 7 | 7 | AY.13 | 0.001127 |
ORF3a | 103 | A103S | Gcc | Tcc | 7 | 7 | AY.3.1 | 0.000597 |
ORF3a | 103 | A103D | gCc | gAc | 7 | 7 | AY.39 | 0.000173 |
ORF3a | 103 | A103P | Gcc | Ccc | 7 | 7 | AY.4 | 0.000011 |
ORF3a | 103 | A103S | Gcc | Tcc | 7 | 7 | AY.46 | 0.000729 |
ORF3a | 103 | A103P | Gcc | Ccc | 7 | 7 | B.1 | 0.000064 |
ORF3a | 103 | A103V | gCc | gTc | 7 | 7 | B.1.1 | 0.000127 |
ORF3a | 103 | A103A | gcC | gcA | 7 | 7 | B.1.1.372 | 0.004821 |
ORF3a | 103 | A103S | Gcc | Tcc | 7 | 7 | B.1.1.63 | 0.002701 |
ORF3a | 103 | A103S | Gcc | Tcc | 7 | 7 | B.1.258.17 | 0.000728 |
ORF3a | 103 | A103A | gcC | gcT | 7 | 7 | C.37 | 0.000812 |
ORF3a | 103 | A103S | Gcc | Tcc | 7 | 7 | P.1.14 | 0.000335 |
ORF3a | 103 | A103G | gCc | gGc | 6 | 6 | All | 0.000001 |
ORF3a | 103 | A103S | Gcc | Tcc | 6 | 6 | AY.120 | 0.000223 |
ORF3a | 103 | A103A | gcC | gcT | 6 | 6 | AY.20 | 0.000233 |
ORF3a | 103 | A103V | gCc | gTc | 6 | 6 | AY.23 | 0.000418 |
ORF3a | 103 | A103P | Gcc | Ccc | 6 | 6 | AY.34 | 0.000582 |
ORF3a | 103 | A103S | Gcc | Tcc | 6 | 6 | AY.37 | 0.001896 |
ORF3a | 103 | A103V | gCc | gTc | 6 | 6 | AY.43 | 0.000027 |
ORF3a | 103 | A103A | gcC | gcT | 5 | 6 | AY.44 | 0.00003 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 6 | AY.44 | 0.000006 |
ORF3a | 103 | A103S | Gcc | Tcc | 6 | 6 | AY.9 | 0.000406 |
ORF3a | 103 | A103P | Gcc | Ccc | 6 | 6 | AY.98.1 | 0.000291 |
ORF3a | 103 | A103S | Gcc | Tcc | 6 | 6 | B.1.1.317 | 0.00247 |
ORF3a | 103 | A103T | Gcc | Acc | 6 | 6 | B.1.160 | 0.000187 |
ORF3a | 103 | A103del | GCC | --- | 6 | 6 | B.1.617.2 | 0.000023 |
ORF3a | 103 | A103V | gCc | gTc | 6 | 6 | C.37 | 0.000696 |
ORF3a | 103 | A103P | Gcc | Ccc | 6 | 6 | D.2 | 0.00045 |
ORF3a | 103 | A103V | gCc | gTc | 6 | 6 | P.1.17 | 0.000971 |
ORF3a | 103 | A103V | gCc | gTc | 3 | 5 | 0.166667 | |
ORF3a | 103 | A103V | gCC | gTG | 2 | 5 | 0.111111 | |
ORF3a | 103 | A103I | GCc | ATc | 3 | 5 | All | 0.000001 |
ORF3a | 103 | A103I | GCC | ATT | 1 | 5 | All | 0 |
ORF3a | 103 | A103I | GCC | ATA | 1 | 5 | All | 0 |
ORF3a | 103 | A103S | Gcc | Tcc | 5 | 5 | AY.100 | 0.00023 |
ORF3a | 103 | A103P | Gcc | Ccc | 5 | 5 | AY.20 | 0.000194 |
ORF3a | 103 | A103T | Gcc | Acc | 5 | 5 | AY.26 | 0.000142 |
ORF3a | 103 | A103T | Gcc | Acc | 5 | 5 | AY.29 | 0.000079 |
ORF3a | 103 | A103A | gcC | gcT | 4 | 5 | AY.39 | 0.000099 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 5 | AY.39 | 0.000025 |
ORF3a | 103 | A103del | GCC | --- | 5 | 5 | AY.43 | 0.000022 |
ORF3a | 103 | A103P | Gcc | Ccc | 5 | 5 | AY.43 | 0.000022 |
ORF3a | 103 | A103P | Gcc | Ccc | 5 | 5 | AY.44 | 0.00003 |
ORF3a | 103 | A103V | gCc | gTc | 5 | 5 | AY.44 | 0.00003 |
ORF3a | 103 | A103S | Gcc | Tcc | 5 | 5 | AY.9.2 | 0.000184 |
ORF3a | 103 | A103V | gCc | gTc | 5 | 5 | B.1.1.519 | 0.000199 |
ORF3a | 103 | A103S | Gcc | Tcc | 5 | 5 | B.1.177 | 0.000066 |
ORF3a | 103 | A103S | Gcc | Tcc | 4 | 5 | B.1.221 | 0.000284 |
ORF3a | 103 | A103S | GcC | TcT | 1 | 5 | B.1.221 | 0.000071 |
ORF3a | 103 | A103del | GCC | --- | 5 | 5 | B.1.525 | 0.000566 |
ORF3a | 103 | A103del | GCC | --- | 5 | 5 | P.1 | 0.000079 |
ORF3a | 103 | A103A | gcC | gcG | 2 | 4 | 0.111111 | |
ORF3a | 103 | A103A | gcC | gcT | 2 | 4 | 0.111111 | |
ORF3a | 103 | A103S | Gcc | Tcc | 4 | 4 | A.5 | 0.007692 |
ORF3a | 103 | A103A | gcC | gcT | 4 | 4 | AY.100 | 0.000184 |
ORF3a | 103 | A103A | gcC | gcT | 4 | 4 | AY.102 | 0.000106 |
ORF3a | 103 | A103del | GCC | --- | 4 | 4 | AY.25 | 0.000024 |
ORF3a | 103 | A103A | gcC | gcT | 4 | 4 | AY.3.1 | 0.000341 |
ORF3a | 103 | A103S | Gcc | Tcc | 4 | 4 | AY.58 | 0.00363 |
ORF3a | 103 | A103S | Gcc | Tcc | 4 | 4 | AY.61 | 0.000419 |
ORF3a | 103 | A103A | gcC | gcT | 4 | 4 | AY.75 | 0.000224 |
ORF3a | 103 | A103S | Gcc | Tcc | 4 | 4 | AY.8 | 0.002424 |
ORF3a | 103 | A103T | Gcc | Acc | 4 | 4 | AY.9.1 | 0.000335 |
ORF3a | 103 | A103T | Gcc | Acc | 4 | 4 | B.1.1 | 0.000073 |
ORF3a | 103 | A103T | Gcc | Acc | 4 | 4 | B.1.1.171 | 0.014706 |
ORF3a | 103 | A103D | gCc | gAc | 4 | 4 | B.1.1.7 | 0.000004 |
ORF3a | 103 | A103A | gcC | gcT | 4 | 4 | B.1.221 | 0.000284 |
ORF3a | 103 | A103T | Gcc | Acc | 4 | 4 | B.1.420 | 0.041667 |
ORF3a | 103 | A103V | gCc | gTc | 4 | 4 | B.1.525 | 0.000453 |
ORF3a | 103 | A103S | Gcc | Tcc | 4 | 4 | B.1.526 | 0.000094 |
ORF3a | 103 | A103S | Gcc | Tcc | 4 | 4 | B.1.628 | 0.001409 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 4 | B.1.91 | 0.004149 |
ORF3a | 103 | A103V | gCC | gTT | 1 | 4 | B.1.91 | 0.002075 |
ORF3a | 103 | A103V | gCC | gTA | 1 | 4 | B.1.91 | 0.002075 |
ORF3a | 103 | A103A | gcC | gcT | 4 | 4 | D.2 | 0.0003 |
ORF3a | 103 | A103V | gCc | gTc | 4 | 4 | P.1.14 | 0.000191 |
ORF3a | 103 | A103del | GCC | --- | 4 | 4 | P.1.15 | 0.000929 |
ORF3a | 103 | A103S | Gcc | Tcc | 4 | 4 | P.2 | 0.000747 |
ORF3a | 103 | A103S | Gcc | Tcc | 3 | 3 | 0.166667 | |
ORF3a | 103 | A103T | Gcc | Acc | 3 | 3 | AY.103 | 0.000019 |
ORF3a | 103 | A103A | gcC | gcT | 3 | 3 | AY.118 | 0.000188 |
ORF3a | 103 | A103A | gcC | gcT | 3 | 3 | AY.121 | 0.000406 |
ORF3a | 103 | A103del | GCC | --- | 3 | 3 | AY.23 | 0.000209 |
ORF3a | 103 | A103T | Gcc | Acc | 3 | 3 | AY.23 | 0.000209 |
ORF3a | 103 | A103A | gcC | gcT | 3 | 3 | AY.24 | 0.001293 |
ORF3a | 103 | A103S | Gcc | Tcc | 3 | 3 | AY.26 | 0.000085 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 3 | AY.26 | 0.000057 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 3 | AY.26 | 0.000028 |
ORF3a | 103 | A103A | gcC | gcG | 3 | 3 | AY.35 | 0.000699 |
ORF3a | 103 | A103A | gcC | gcT | 3 | 3 | AY.39.1 | 0.000119 |
ORF3a | 103 | A103del | GCC | --- | 3 | 3 | AY.4 | 0.000005 |
ORF3a | 103 | A103S | Gcc | Tcc | 3 | 3 | AY.42 | 0.000121 |
ORF3a | 103 | A103D | gCc | gAc | 3 | 3 | AY.44 | 0.000018 |
ORF3a | 103 | A103S | Gcc | Tcc | 3 | 3 | AY.46.6 | 0.000217 |
ORF3a | 103 | A103A | gcC | gcT | 3 | 3 | AY.47 | 0.000093 |
ORF3a | 103 | A103S | Gcc | Tcc | 3 | 3 | AY.47 | 0.000093 |
ORF3a | 103 | A103S | Gcc | Tcc | 3 | 3 | AY.6 | 0.000123 |
ORF3a | 103 | A103S | Gcc | Tcc | 3 | 3 | AY.98 | 0.000237 |
ORF3a | 103 | A103A | gcC | gcT | 3 | 3 | AY.98.1 | 0.000145 |
ORF3a | 103 | A103D | gCc | gAc | 3 | 3 | B.1.1 | 0.000054 |
ORF3a | 103 | A103T | Gcc | Acc | 3 | 3 | B.1.1.284 | 0.000322 |
ORF3a | 103 | A103F | GCc | TTc | 3 | 3 | B.1.1.317 | 0.001235 |
ORF3a | 103 | A103S | Gcc | Tcc | 3 | 3 | B.1.1.519 | 0.000119 |
ORF3a | 103 | A103V | gCc | gTc | 3 | 3 | B.1.112 | 0.015544 |
ORF3a | 103 | A103T | Gcc | Acc | 3 | 3 | B.1.177 | 0.00004 |
ORF3a | 103 | A103D | gCc | gAc | 3 | 3 | B.1.2 | 0.000026 |
ORF3a | 103 | A103V | gCc | gTc | 3 | 3 | B.1.243 | 0.000209 |
ORF3a | 103 | A103T | Gcc | Acc | 3 | 3 | B.1.258 | 0.0002 |
ORF3a | 103 | A103V | gCc | gTc | 3 | 3 | B.1.351 | 0.000089 |
ORF3a | 103 | A103A | gcC | gcT | 3 | 3 | B.1.428 | 0.003061 |
ORF3a | 103 | A103T | Gcc | Acc | 3 | 3 | B.1.526 | 0.000071 |
ORF3a | 103 | A103S | Gcc | Tcc | 3 | 3 | B.1.538 | 0.024194 |
ORF3a | 103 | A103V | gCc | gTc | 3 | 3 | B.1.574 | 0.006452 |
ORF3a | 103 | A103del | GCC | --- | 3 | 3 | B.1.621 | 0.000266 |
ORF3a | 103 | A103P | Gcc | Ccc | 3 | 3 | B.1.621 | 0.000266 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 3 | B.1.623 | 0.001073 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 3 | B.1.623 | 0.000536 |
ORF3a | 103 | A103A | gcC | gcT | 3 | 3 | B.1.637 | 0.000219 |
ORF3a | 103 | A103T | Gcc | Acc | 3 | 3 | C.36 | 0.002732 |
ORF3a | 103 | A103T | Gcc | Acc | 3 | 3 | P.1 | 0.000047 |
ORF3a | 103 | A103G | gCc | gGc | 2 | 2 | 0.111111 | |
ORF3a | 103 | A103I | GCc | ATc | 2 | 2 | 0.111111 | |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | AE.1 | 0.022727 |
ORF3a | 103 | A103C | GCc | TGc | 2 | 2 | All | 0 |
ORF3a | 103 | A103N | GCc | AAc | 2 | 2 | All | 0 |
ORF3a | 103 | A103del2 | GCC | --N | 1 | 2 | All | 0 |
ORF3a | 103 | A103del2 | GCc | --c | 1 | 2 | All | 0 |
ORF3a | 103 | A103D | gCc | gAc | 2 | 2 | AY.102 | 0.000053 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | AY.103 | 0.000012 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | AY.105 | 0.001286 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | AY.108 | 0.002205 |
ORF3a | 103 | A103del | GCC | --- | 2 | 2 | AY.108 | 0.002205 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | AY.109 | 0.001479 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | AY.117 | 0.000169 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | AY.118 | 0.000125 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | AY.12 | 0.000632 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | AY.120 | 0.000074 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 2 | AY.120 | 0.000037 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 2 | AY.120 | 0.000037 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | AY.16.1 | 0.00094 |
ORF3a | 103 | A103D | gCc | gAc | 2 | 2 | AY.25 | 0.000012 |
ORF3a | 103 | A103P | Gcc | Ccc | 2 | 2 | AY.26 | 0.000057 |
ORF3a | 103 | A103D | gCc | gAc | 2 | 2 | AY.27 | 0.000129 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | AY.29 | 0.000032 |
ORF3a | 103 | A103del | GCC | --- | 2 | 2 | AY.29 | 0.000032 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | AY.29.1 | 0.000441 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | AY.3 | 0.00002 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 2 | AY.3 | 0.00001 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 2 | AY.3 | 0.00001 |
ORF3a | 103 | A103P | Gcc | Ccc | 2 | 2 | AY.32 | 0.001065 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | AY.33 | 0.000134 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | AY.34.1 | 0.00102 |
ORF3a | 103 | A103del | GCC | --- | 2 | 2 | AY.35 | 0.000466 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | AY.39 | 0.000049 |
ORF3a | 103 | A103D | gCc | gAc | 2 | 2 | AY.4 | 0.000003 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | AY.4.2 | 0.000043 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | AY.4.5 | 0.000215 |
ORF3a | 103 | A103del | GCC | --- | 2 | 2 | AY.4.5 | 0.000215 |
ORF3a | 103 | A103D | gCc | gAc | 2 | 2 | AY.46 | 0.000208 |
ORF3a | 103 | A103A | gcC | gcA | 2 | 2 | AY.46 | 0.000208 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | AY.47 | 0.000062 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | AY.48 | 0.00093 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | AY.5 | 0.000041 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | AY.5.4 | 0.000553 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | AY.54 | 0.000191 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | AY.61 | 0.00021 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | AY.68 | 0.000547 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | AY.71 | 0.00095 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | AY.77 | 0.002255 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | AY.91 | 0.001461 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | AY.98 | 0.000158 |
ORF3a | 103 | A103P | Gcc | Ccc | 2 | 2 | B.1.1 | 0.000036 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | B.1.1.128 | 0.014184 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | B.1.1.216 | 0.001781 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | B.1.1.25 | 0.001137 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | B.1.1.306 | 0.000877 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | B.1.1.307 | 0.005063 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | B.1.1.307 | 0.005063 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 2 | B.1.1.326 | 0.001761 |
ORF3a | 103 | A103S | GcC | TcA | 1 | 2 | B.1.1.326 | 0.001761 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 2 | B.1.1.33 | 0.000421 |
ORF3a | 103 | A103P | GcC | CcA | 1 | 2 | B.1.1.33 | 0.000421 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | B.1.1.37 | 0.000386 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | B.1.1.397 | 0.004505 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | B.1.1.398 | 0.006452 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | B.1.1.464 | 0.002946 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | B.1.1.518 | 0.012658 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | B.1.1.519 | 0.000079 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | B.1.160.16 | 0.001859 |
ORF3a | 103 | A103D | gCc | gAc | 2 | 2 | B.1.177 | 0.000026 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | B.1.177.21 | 0.000153 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | B.1.177.57 | 0.000562 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | B.1.177.86 | 0.000367 |
ORF3a | 103 | A103del | GCC | --- | 2 | 2 | B.1.2 | 0.000018 |
ORF3a | 103 | A103D | gCc | gAc | 2 | 2 | B.1.221 | 0.000142 |
ORF3a | 103 | A103F | GCC | TTT | 1 | 2 | B.1.221 | 0.000071 |
ORF3a | 103 | A103F | GCc | TTc | 1 | 2 | B.1.221 | 0.000071 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | B.1.234 | 0.000264 |
ORF3a | 103 | A103del | GCC | --- | 2 | 2 | B.1.240 | 0.000431 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | B.1.258 | 0.000133 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | B.1.258 | 0.000133 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | B.1.351 | 0.000059 |
ORF3a | 103 | A103S | Gcc | Tcc | 2 | 2 | B.1.36.16 | 0.002849 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | B.1.526 | 0.000047 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | B.1.567 | 0.006667 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | B.1.621 | 0.000177 |
ORF3a | 103 | A103I | GCc | ATc | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 103 | A103T | GcC | AcA | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 103 | A103I | GCC | ATA | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 103 | A103S | GcC | TcT | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 103 | A103F | GCC | TTT | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 103 | A103F | GCc | TTc | 1 | 2 | B.1.91 | 0.002075 |
ORF3a | 103 | A103A | gcC | gcT | 2 | 2 | L.3 | 0.007092 |
ORF3a | 103 | A103P | Gcc | Ccc | 2 | 2 | P.1 | 0.000032 |
ORF3a | 103 | A103P | Gcc | Ccc | 2 | 2 | P.1.14 | 0.000096 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | P.1.14 | 0.000096 |
ORF3a | 103 | A103T | Gcc | Acc | 2 | 2 | P.1.15 | 0.000465 |
ORF3a | 103 | A103V | gCc | gTc | 2 | 2 | P.3 | 0.00319 |
ORF3a | 103 | A103F | GCc | TTc | 1 | 1 | 0.055556 | |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | 0.055556 | |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | 0.055556 | |
ORF3a | 103 | A103C | GCc | TGc | 1 | 1 | 0.055556 | |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | A | 0.000387 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | A.2.5.2 | 0.001572 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | A.27 | 0.001656 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AD.2 | 0.000219 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AD.2 | 0.000219 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | AH.3 | 0.003802 |
ORF3a | 103 | A103L | GCC | CTT | 1 | 1 | All | 0 |
ORF3a | 103 | A103X | GCC | TAA | 1 | 1 | All | 0 |
ORF3a | 103 | A103E | gCC | gAA | 1 | 1 | All | 0 |
ORF3a | 103 | A103Y | GCc | TAc | 1 | 1 | All | 0 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | AV.1 | 0.005051 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.1 | 0.000396 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.100 | 0.000046 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | AY.100 | 0.000046 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.103 | 0.000006 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | AY.103 | 0.000006 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.106 | 0.000335 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | AY.106 | 0.000335 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.110 | 0.000113 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.111 | 0.000183 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.111 | 0.000183 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | AY.111 | 0.000183 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.116 | 0.000287 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.117 | 0.000085 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.119 | 0.000035 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | AY.12 | 0.000316 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.12 | 0.000316 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.120 | 0.000037 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.120.1 | 0.000321 |
ORF3a | 103 | A103del1 | gCc | g-c | 1 | 1 | AY.120.1 | 0.000321 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | AY.13 | 0.000161 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.14 | 0.000088 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.14 | 0.000088 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.16 | 0.00038 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.16 | 0.00038 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.16.1 | 0.00047 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.16.1 | 0.00047 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.17 | 0.008197 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.2 | 0.000356 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | AY.20 | 0.000039 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.22 | 0.002092 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.23 | 0.00007 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.24 | 0.000431 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.27 | 0.000065 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.3 | 0.00001 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.3 | 0.00001 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.30 | 0.000396 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | AY.33 | 0.000067 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.33 | 0.000067 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.33 | 0.000067 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.34.1 | 0.00051 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | AY.34.1 | 0.00051 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.36 | 0.000148 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.37 | 0.000316 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.38 | 0.000499 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.39 | 0.000025 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | AY.39 | 0.000025 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.39.1 | 0.00004 |
ORF3a | 103 | A103N | GCc | AAc | 1 | 1 | AY.4 | 0.000002 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | AY.4.2 | 0.000022 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.4.3 | 0.000842 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.4.4 | 0.000409 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.4.5 | 0.000107 |
ORF3a | 103 | A103del1 | Gcc | -cc | 1 | 1 | AY.4.5 | 0.000107 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | AY.40 | 0.000964 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.42 | 0.00004 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.42 | 0.00004 |
ORF3a | 103 | A103del1 | GCc | A-c | 1 | 1 | AY.43 | 0.000004 |
ORF3a | 103 | A103G | gCc | gGc | 1 | 1 | AY.43 | 0.000004 |
ORF3a | 103 | A103del1 | gCc | g-c | 1 | 1 | AY.44 | 0.000006 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.45 | 0.000122 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.45 | 0.000122 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.45 | 0.000122 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.45 | 0.000122 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.46 | 0.000104 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.46.4 | 0.000165 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.46.4 | 0.000165 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.46.5 | 0.000198 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.47 | 0.000031 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.48 | 0.000465 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.5 | 0.000021 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.5.4 | 0.000277 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.53 | 0.000288 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.54 | 0.000095 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.55 | 0.000917 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.55 | 0.000917 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.59 | 0.00053 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.6 | 0.000041 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.61 | 0.000105 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.62 | 0.000436 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.64 | 0.000595 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.68 | 0.000274 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | AY.68 | 0.000274 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.7.1 | 0.000113 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.75.1 | 0.00018 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.75.1 | 0.00018 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.76 | 0.004831 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.78 | 0.001541 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.79 | 0.001211 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.84 | 0.000437 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.85 | 0.000427 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.85 | 0.000427 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.85 | 0.000427 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | AY.86 | 0.00083 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.87 | 0.000833 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.9 | 0.000068 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.9.2 | 0.000037 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | AY.92 | 0.000287 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.92 | 0.000287 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.92 | 0.000287 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.93 | 0.000273 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | AY.93 | 0.000273 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.98 | 0.000079 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | AY.98.1 | 0.000048 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | AY.98.1 | 0.000048 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | AY.98.1 | 0.000048 |
ORF3a | 103 | A103G | gCc | gGc | 1 | 1 | AY.99.1 | 0.001553 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | B | 0.000128 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B | 0.000128 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B | 0.000128 |
ORF3a | 103 | A103G | gCc | gGc | 1 | 1 | B | 0.000128 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | B | 0.000128 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B | 0.000128 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF3a | 103 | A103G | gCc | gGc | 1 | 1 | B.1.1 | 0.000018 |
ORF3a | 103 | A103C | GCc | TGc | 1 | 1 | B.1.1 | 0.000018 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.1.1 | 0.000327 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.1.121 | 0.002427 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.1.132 | 0.014925 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | B.1.1.153 | 0.001095 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.1.204 | 0.00304 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.1.232 | 0.001815 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | B.1.1.237 | 0.005405 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B.1.1.25 | 0.000569 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.1.28 | 0.000311 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.1.280 | 0.003086 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.1.294 | 0.001266 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.1.305 | 0.003861 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.1.312 | 0.001912 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.1.315 | 0.008475 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF3a | 103 | A103X | GCC | TAA | 1 | 1 | B.1.1.326 | 0.001761 |
ORF3a | 103 | A103Y | GCc | TAc | 1 | 1 | B.1.1.326 | 0.001761 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 1 | B.1.1.326 | 0.001761 |
ORF3a | 103 | A103E | gCC | gAA | 1 | 1 | B.1.1.326 | 0.001761 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | B.1.1.326 | 0.001761 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.1.33 | 0.000421 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 1 | B.1.1.33 | 0.000421 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | B.1.1.372 | 0.000689 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.1.373 | 0.02381 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.1.376 | 0.005952 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.1.409 | 0.002833 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B.1.1.416 | 0.000905 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.1.420 | 0.001006 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.1.46 | 0.004367 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.1.57 | 0.011494 |
ORF3a | 103 | A103L | GCC | CTT | 1 | 1 | B.1.1.7 | 0.000001 |
ORF3a | 103 | A103del1 | Gcc | -cc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF3a | 103 | A103I | GCC | ATT | 1 | 1 | B.1.1.7 | 0.000001 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.1.98 | 0.018519 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.126 | 0.001276 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.140 | 0.018868 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.143 | 0.021277 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.157 | 0.002985 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | B.1.160 | 0.000031 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.160 | 0.000031 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.160.23 | 0.004831 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.160.8 | 0.001289 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | B.1.177 | 0.000013 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.177.18 | 0.00116 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.177.24 | 0.001295 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.177.35 | 0.000691 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.177.43 | 0.001477 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.177.46 | 0.000918 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.177.51 | 0.004566 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.177.58 | 0.001332 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | B.1.177.6 | 0.000977 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.177.75 | 0.001041 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.177.81 | 0.000189 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.177.82 | 0.000477 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.177.84 | 0.006667 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | B.1.2 | 0.000009 |
ORF3a | 103 | A103del1 | gCc | g-c | 1 | 1 | B.1.2 | 0.000009 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.210 | 0.002132 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B.1.214 | 0.003663 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | B.1.221.4 | 0.004167 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.232 | 0.000537 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | B.1.234 | 0.000132 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B.1.239 | 0.001221 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.240 | 0.000216 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.241 | 0.000812 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | B.1.258.11 | 0.000396 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.258.11 | 0.000396 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 1 | B.1.279 | 0.000514 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.349 | 0.000715 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | B.1.351 | 0.00003 |
ORF3a | 103 | A103D | gCc | gAc | 1 | 1 | B.1.351 | 0.00003 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF3a | 103 | A103del1 | gCc | g-c | 1 | 1 | B.1.36 | 0.000146 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B.1.36 | 0.000146 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.36 | 0.000146 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.36.24 | 0.006173 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | B.1.36.25 | 0.002208 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.36.29 | 0.000517 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.36.31 | 0.001751 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.36.35 | 0.002604 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.362 | 0.001541 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.362.2 | 0.004717 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.367 | 0.000792 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.369 | 0.000285 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.375 | 0.00082 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.416 | 0.001269 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 1 | B.1.416.1 | 0.001563 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.427 | 0.00005 |
ORF3a | 103 | A103A | gcC | gcA | 1 | 1 | B.1.427 | 0.00005 |
ORF3a | 103 | A103N | GCc | AAc | 1 | 1 | B.1.429 | 0.000024 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.452 | 0.013699 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.466.2 | 0.000391 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.466.2 | 0.000391 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.487 | 0.019608 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.498 | 0.020408 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.499 | 0.00105 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.509 | 0.000866 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B.1.524 | 0.001406 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.524 | 0.001406 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.524 | 0.001406 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.525 | 0.000113 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.526 | 0.000024 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.565 | 0.00081 |
ORF3a | 103 | A103del1 | gCc | g-c | 1 | 1 | B.1.568 | 0.001111 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.575 | 0.000303 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.575 | 0.000303 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.595.2 | 0.04 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.596 | 0.000087 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.596 | 0.000087 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.599 | 0.00365 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.609 | 0.000479 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.609 | 0.000479 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.617.1 | 0.000129 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF3a | 103 | A103del1 | gCc | g-c | 1 | 1 | B.1.617.2 | 0.000004 |
ORF3a | 103 | A103del2 | GCc | --c | 1 | 1 | B.1.617.2 | 0.000004 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.1.618 | 0.004032 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B.1.621 | 0.000089 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B.1.625 | 0.002353 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.631 | 0.003367 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | B.1.637 | 0.000073 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | B.1.638 | 0.052632 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | B.1.94 | 0.027027 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | B.1.97 | 0.025641 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | B.40 | 0.000364 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | C.14 | 0.004329 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | C.37 | 0.000116 |
ORF3a | 103 | A103P | Gcc | Ccc | 1 | 1 | C.37.1 | 0.002618 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | C.40 | 0.027778 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | D.2 | 0.000075 |
ORF3a | 103 | A103del2 | GCC | --N | 1 | 1 | P.1 | 0.000016 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | P.1.12 | 0.000484 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | P.1.15 | 0.000232 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | P.1.17 | 0.000162 |
ORF3a | 103 | A103S | Gcc | Tcc | 1 | 1 | P.1.2 | 0.001156 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | P.2 | 0.000187 |
ORF3a | 103 | A103T | Gcc | Acc | 1 | 1 | P.2 | 0.000187 |
ORF3a | 103 | A103A | gcC | gcT | 1 | 1 | P.7 | 0.004367 |
ORF3a | 103 | A103V | gCc | gTc | 1 | 1 | Q.3 | 0.000145 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | Q.4 | 0.000455 |
ORF3a | 103 | A103del | GCC | --- | 1 | 1 | U.3 | 0.003861 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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