CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : CodonNum = 103

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a103A103TnonsynGccAcc401540140.99975125699-25701
ORF3a103A103TnonsynGcCAcA401510.00024906625699-25701
ORF3a103A103SnonsynGccTcc249124050.96547625699-25701
ORF3a103A103SnonsynGcCTcA2491780.031312725699-25701
ORF3a103A103SnonsynGcCTcT249160.0024086725699-25701
ORF3a103A103SnonsynGCcAGc249110.00040144525699-25701
ORF3a103A103SnonsynGcCTcG249110.00040144525699-25701
ORF3a103A103AsyngcCgcT125311850.9457325699-25701
ORF3a103A103AsyngcCgcA1253620.049481225699-25701
ORF3a103A103AsyngcCgcG125360.0047885125699-25701
ORF3a103A103VnonsyngCcgTc8648590.99421325699-25701
ORF3a103A103VnonsyngCCgTT86420.0023148125699-25701
ORF3a103A103VnonsyngCCgTG86420.0023148125699-25701
ORF3a103A103VnonsyngCCgTA86410.0011574125699-25701
ORF3a103A103PnonsynGccCcc1871850.98930525699-25701
ORF3a103A103PnonsynGcCCcA18720.010695225699-25701
ORF3a103A103deldelGCC---145145125699-25701
ORF3a103A103DnonsyngCcgAc114114125699-25701
ORF3a103A103del1delgCcg-c960.66666725699-25701
ORF3a103A103del1delGcc-cc920.22222225699-25701
ORF3a103A103del1delGCcA-c910.11111125699-25701
ORF3a103A103FnonsynGCcTTc860.7525699-25701
ORF3a103A103FnonsynGCCTTT820.2525699-25701
ORF3a103A103GnonsyngCcgGc66125699-25701
ORF3a103A103InonsynGCcATc530.625699-25701
ORF3a103A103InonsynGCCATT510.225699-25701
ORF3a103A103InonsynGCCATA510.225699-25701
ORF3a103A103CnonsynGCcTGc22125699-25701
ORF3a103A103NnonsynGCcAAc22125699-25701
ORF3a103A103del2delGCC--N210.525699-25701
ORF3a103A103del2delGCc--c210.525699-25701
ORF3a103A103YnonsynGCcTAc11125699-25701
ORF3a103A103XnonsynGCCTAA11125699-25701
ORF3a103A103EnonsyngCCgAA11125699-25701
ORF3a103A103LnonsynGCCCTT11125699-25701

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a103A103TGccAcc40144015All0.000768
ORF3a103A103TGcCAcA14015All0
ORF3a103A103TGccAcc27362736AY.430.012122
ORF3a103A103SGccTcc24052491All0.00046
ORF3a103A103SGcCTcA782491All0.000015
ORF3a103A103SGcCTcT62491All0.000001
ORF3a103A103SGCcAGc12491All0
ORF3a103A103SGcCTcG12491All0
ORF3a103A103AgcCgcT11851253All0.000227
ORF3a103A103AgcCgcA621253All0.000012
ORF3a103A103AgcCgcG61253All0.000001
ORF3a103A103VgCcgTc859864All0.000164
ORF3a103A103VgCCgTG2864All0
ORF3a103A103VgCCgTT2864All0
ORF3a103A103VgCCgTA1864All0
ORF3a103A103TGccAcc770770B.1.1.5190.030577
ORF3a103A103SGccTcc650651B.1.1.70.000582
ORF3a103A103SGcCTcT1651B.1.1.70.000001
ORF3a103A103VgCcgTc493493B.1.1.70.000441
ORF3a103A103AgcCgcT320320AY.290.005048
ORF3a103A103SGccTcc270271B.1.617.20.001017
ORF3a103A103SGcCTcA1271B.1.617.20.000004
ORF3a103A103SGccTcc189264AY.40.000294
ORF3a103A103SGcCTcA75264AY.40.000117
ORF3a103A103SGccTcc215217AY.430.000953
ORF3a103A103SGCcAGc1217AY.430.000004
ORF3a103A103SGcCTcG1217AY.430.000004
ORF3a103A103PGccCcc185187All0.000035
ORF3a103A103PGcCCcA2187All0
ORF3a103A103AgcCgcT142148B.1.1.70.000127
ORF3a103A103AgcCgcA5148B.1.1.70.000004
ORF3a103A103AgcCgcG1148B.1.1.70.000001
ORF3a103A103delGCC---145145All0.000028
ORF3a103A103DgCcgAc114114All0.000022
ORF3a103A103TGccAcc102102B.1.1.3650.569832
ORF3a103A103AgcCgcT9898B.1.1.280.030501
ORF3a103A103TGccAcc9494B.1.617.20.000354
ORF3a103A103AgcCgcT9394B.1.617.20.00035
ORF3a103A103AgcCgcA194B.1.617.20.000004
ORF3a103A103SGccTcc8282AY.50.001693
ORF3a103A103SGccTcc7575AY.250.000451
ORF3a103A103SGccTcc6567P.10.001024
ORF3a103A103SGcCTcT267P.10.000032
ORF3a103A103SGccTcc6363AY.1020.00167
ORF3a103A103TGccAcc6060B.1.1.70.000054
ORF3a103A103SGccTcc5858B.1.20.000511
ORF3a103A103SGccTcc5656B.1.2430.003897
ORF3a103A103VgCcgTc5353P.10.000835
ORF3a103A103AgcCgcT4849AY.40.000075
ORF3a103A103AgcCgcA149AY.40.000002
ORF3a103A103SGccTcc4747AY.1190.001659
ORF3a103A103SGccTcc4040AY.440.000243
ORF3a103A103DgCcgAc3838AY.430.000168
ORF3a103A103delGCC---3838B.1.1.70.000034
ORF3a103A103SGccTcc3737B.1.177.410.0925
ORF3a103A103PGccCcc3737B.1.617.20.000139
ORF3a103A103AgcCgcT3434B.1.1.700.011596
ORF3a103A103AgcCgcT3434B.1.2430.002366
ORF3a103A103SGccTcc3333B.1.1.3060.014467
ORF3a103A103VgCcgTc3030AY.250.00018
ORF3a103A103SGccTcc3030AY.390.000741
ORF3a103A103VgCcgTc3030B.1.617.20.000113
ORF3a103A103AgcCgcT2929AY.1030.00018
ORF3a103A103SGccTcc2727AY.750.001513
ORF3a103A103AgcCgcT2727B.1.2580.001797
ORF3a103A103AgcCgcT2525AY.430.000111
ORF3a103A103PGccCcc2425B.1.1.70.000021
ORF3a103A103PGcCCcA125B.1.1.70.000001
ORF3a103A103SGccTcc2424AY.200.000933
ORF3a103A103AgcCgcA1524B.1.360.002189
ORF3a103A103AgcCgcT924B.1.360.001313
ORF3a103A103SGccTcc2323AY.330.001536
ORF3a103A103SGccTcc2323AY.4.20.000499
ORF3a103A103SGccTcc2123B.10.000192
ORF3a103A103SGcCTcA123B.10.000009
ORF3a103A103SGcCTcT123B.10.000009
ORF3a103A103SGccTcc2222AY.4.50.002365
ORF3a103A103TGccAcc2121AY.40.000033
ORF3a103A103AgcCgcT2121B.1.5960.00183
ORF3a103A103VgCcgTc2020AY.40.000031
ORF3a103A103AgcCgcT1720B.10.000156
ORF3a103A103AgcCgcA320B.10.000027
ORF3a103A103AgcCgcT1020B.1.1770.000132
ORF3a103A103AgcCgcA1020B.1.1770.000132
ORF3a103A103VgCcgTc2020B.1.20.000176
ORF3a103A103TGccAcc2020B.1.2400.004311
ORF3a103A103AgcCgcT2020B.1.4290.000471
ORF3a103A103PGccCcc1919B.1.2320.01021
ORF3a103A103SGccTcc1818B.1.3510.000535
ORF3a103A103SGccTcc1717B.1.4290.0004
ORF3a103A103TGccAcc1616AY.1020.000424
ORF3a103A103VgCcgTc1616P.1.100.004312
ORF3a103A103AgcCgcT915AY.250.000054
ORF3a103A103AgcCgcA615AY.250.000036
ORF3a103A103DgCcgAc1515AY.30.000149
ORF3a103A103VgCcgTc1515AY.4.20.000325
ORF3a103A103AgcCgcT1515B.1.3510.000446
ORF3a103A103AgcCgcT1515C.360.013661
ORF3a103A103AgcCgcT1414B.1.10.000254
ORF3a103A103AgcCgcT1414P.10.000221
ORF3a103A103PGccCcc1313AY.250.000078
ORF3a103A103SGccTcc1313AY.30.000129
ORF3a103A103VgCcgTc1313B.10.000119
ORF3a103A103SGccTcc1313B.1.1600.000405
ORF3a103A103delGCC---1313B.1.1770.000171
ORF3a103A103DgCcgAc1313B.1.617.20.000049
ORF3a103A103SGccTcc1212AY.880.01061
ORF3a103A103TGccAcc1212B.10.00011
ORF3a103A103delGCC---1212B.10.00011
ORF3a103A103VgCcgTc1212B.1.1770.000158
ORF3a103A103SGccTcc1212B.1.177.40.002533
ORF3a103A103TGccAcc1212B.1.20.000106
ORF3a103A103AgcCgcT1212B.1.20.000106
ORF3a103A103TGccAcc1111B.1.4290.000259
ORF3a103A103VgCcgTc1111N.50.019435
ORF3a103A103TGccAcc1010AY.340.00097
ORF3a103A103VgCcgTc910B.1.2210.000639
ORF3a103A103VgCCgTT110B.1.2210.000071
ORF3a103A103del1gCcg-c69All0.000001
ORF3a103A103del1Gcc-cc29All0
ORF3a103A103del1GCcA-c19All0
ORF3a103A103SGccTcc99AY.1170.000761
ORF3a103A103AgcCgcT99B.1.5950.002349
ORF3a103A103AgcCgcT99B.330.191489
ORF3a103A103FGCcTTc68All0.000001
ORF3a103A103FGCCTTT28All0
ORF3a103A103VgCcgTc88AY.1020.000212
ORF3a103A103TGccAcc88AY.250.000048
ORF3a103A103TGccAcc88AY.390.000198
ORF3a103A103TGccAcc88AY.440.000049
ORF3a103A103TGccAcc88AY.99.20.000737
ORF3a103A103SGccTcc88B.1.10.000145
ORF3a103A103SGccTcc88B.1.1.440.019277
ORF3a103A103PGccCcc88B.1.1.5190.000318
ORF3a103A103SGccTcc88C.370.000929
ORF3a103A103SGccTcc77AY.1030.000043
ORF3a103A103SGccTcc77AY.130.001127
ORF3a103A103SGccTcc77AY.3.10.000597
ORF3a103A103DgCcgAc77AY.390.000173
ORF3a103A103PGccCcc77AY.40.000011
ORF3a103A103SGccTcc77AY.460.000729
ORF3a103A103PGccCcc77B.10.000064
ORF3a103A103VgCcgTc77B.1.10.000127
ORF3a103A103AgcCgcA77B.1.1.3720.004821
ORF3a103A103SGccTcc77B.1.1.630.002701
ORF3a103A103SGccTcc77B.1.258.170.000728
ORF3a103A103AgcCgcT77C.370.000812
ORF3a103A103SGccTcc77P.1.140.000335
ORF3a103A103GgCcgGc66All0.000001
ORF3a103A103SGccTcc66AY.1200.000223
ORF3a103A103AgcCgcT66AY.200.000233
ORF3a103A103VgCcgTc66AY.230.000418
ORF3a103A103PGccCcc66AY.340.000582
ORF3a103A103SGccTcc66AY.370.001896
ORF3a103A103VgCcgTc66AY.430.000027
ORF3a103A103AgcCgcT56AY.440.00003
ORF3a103A103AgcCgcA16AY.440.000006
ORF3a103A103SGccTcc66AY.90.000406
ORF3a103A103PGccCcc66AY.98.10.000291
ORF3a103A103SGccTcc66B.1.1.3170.00247
ORF3a103A103TGccAcc66B.1.1600.000187
ORF3a103A103delGCC---66B.1.617.20.000023
ORF3a103A103VgCcgTc66C.370.000696
ORF3a103A103PGccCcc66D.20.00045
ORF3a103A103VgCcgTc66P.1.170.000971
ORF3a103A103VgCcgTc350.166667
ORF3a103A103VgCCgTG250.111111
ORF3a103A103IGCcATc35All0.000001
ORF3a103A103IGCCATT15All0
ORF3a103A103IGCCATA15All0
ORF3a103A103SGccTcc55AY.1000.00023
ORF3a103A103PGccCcc55AY.200.000194
ORF3a103A103TGccAcc55AY.260.000142
ORF3a103A103TGccAcc55AY.290.000079
ORF3a103A103AgcCgcT45AY.390.000099
ORF3a103A103AgcCgcA15AY.390.000025
ORF3a103A103delGCC---55AY.430.000022
ORF3a103A103PGccCcc55AY.430.000022
ORF3a103A103PGccCcc55AY.440.00003
ORF3a103A103VgCcgTc55AY.440.00003
ORF3a103A103SGccTcc55AY.9.20.000184
ORF3a103A103VgCcgTc55B.1.1.5190.000199
ORF3a103A103SGccTcc55B.1.1770.000066
ORF3a103A103SGccTcc45B.1.2210.000284
ORF3a103A103SGcCTcT15B.1.2210.000071
ORF3a103A103delGCC---55B.1.5250.000566
ORF3a103A103delGCC---55P.10.000079
ORF3a103A103AgcCgcG240.111111
ORF3a103A103AgcCgcT240.111111
ORF3a103A103SGccTcc44A.50.007692
ORF3a103A103AgcCgcT44AY.1000.000184
ORF3a103A103AgcCgcT44AY.1020.000106
ORF3a103A103delGCC---44AY.250.000024
ORF3a103A103AgcCgcT44AY.3.10.000341
ORF3a103A103SGccTcc44AY.580.00363
ORF3a103A103SGccTcc44AY.610.000419
ORF3a103A103AgcCgcT44AY.750.000224
ORF3a103A103SGccTcc44AY.80.002424
ORF3a103A103TGccAcc44AY.9.10.000335
ORF3a103A103TGccAcc44B.1.10.000073
ORF3a103A103TGccAcc44B.1.1.1710.014706
ORF3a103A103DgCcgAc44B.1.1.70.000004
ORF3a103A103AgcCgcT44B.1.2210.000284
ORF3a103A103TGccAcc44B.1.4200.041667
ORF3a103A103VgCcgTc44B.1.5250.000453
ORF3a103A103SGccTcc44B.1.5260.000094
ORF3a103A103SGccTcc44B.1.6280.001409
ORF3a103A103VgCcgTc24B.1.910.004149
ORF3a103A103VgCCgTT14B.1.910.002075
ORF3a103A103VgCCgTA14B.1.910.002075
ORF3a103A103AgcCgcT44D.20.0003
ORF3a103A103VgCcgTc44P.1.140.000191
ORF3a103A103delGCC---44P.1.150.000929
ORF3a103A103SGccTcc44P.20.000747
ORF3a103A103SGccTcc330.166667
ORF3a103A103TGccAcc33AY.1030.000019
ORF3a103A103AgcCgcT33AY.1180.000188
ORF3a103A103AgcCgcT33AY.1210.000406
ORF3a103A103delGCC---33AY.230.000209
ORF3a103A103TGccAcc33AY.230.000209
ORF3a103A103AgcCgcT33AY.240.001293
ORF3a103A103SGccTcc33AY.260.000085
ORF3a103A103AgcCgcT23AY.260.000057
ORF3a103A103AgcCgcA13AY.260.000028
ORF3a103A103AgcCgcG33AY.350.000699
ORF3a103A103AgcCgcT33AY.39.10.000119
ORF3a103A103delGCC---33AY.40.000005
ORF3a103A103SGccTcc33AY.420.000121
ORF3a103A103DgCcgAc33AY.440.000018
ORF3a103A103SGccTcc33AY.46.60.000217
ORF3a103A103AgcCgcT33AY.470.000093
ORF3a103A103SGccTcc33AY.470.000093
ORF3a103A103SGccTcc33AY.60.000123
ORF3a103A103SGccTcc33AY.980.000237
ORF3a103A103AgcCgcT33AY.98.10.000145
ORF3a103A103DgCcgAc33B.1.10.000054
ORF3a103A103TGccAcc33B.1.1.2840.000322
ORF3a103A103FGCcTTc33B.1.1.3170.001235
ORF3a103A103SGccTcc33B.1.1.5190.000119
ORF3a103A103VgCcgTc33B.1.1120.015544
ORF3a103A103TGccAcc33B.1.1770.00004
ORF3a103A103DgCcgAc33B.1.20.000026
ORF3a103A103VgCcgTc33B.1.2430.000209
ORF3a103A103TGccAcc33B.1.2580.0002
ORF3a103A103VgCcgTc33B.1.3510.000089
ORF3a103A103AgcCgcT33B.1.4280.003061
ORF3a103A103TGccAcc33B.1.5260.000071
ORF3a103A103SGccTcc33B.1.5380.024194
ORF3a103A103VgCcgTc33B.1.5740.006452
ORF3a103A103delGCC---33B.1.6210.000266
ORF3a103A103PGccCcc33B.1.6210.000266
ORF3a103A103AgcCgcT23B.1.6230.001073
ORF3a103A103AgcCgcA13B.1.6230.000536
ORF3a103A103AgcCgcT33B.1.6370.000219
ORF3a103A103TGccAcc33C.360.002732
ORF3a103A103TGccAcc33P.10.000047
ORF3a103A103GgCcgGc220.111111
ORF3a103A103IGCcATc220.111111
ORF3a103A103SGccTcc22AE.10.022727
ORF3a103A103CGCcTGc22All0
ORF3a103A103NGCcAAc22All0
ORF3a103A103del2GCC--N12All0
ORF3a103A103del2GCc--c12All0
ORF3a103A103DgCcgAc22AY.1020.000053
ORF3a103A103VgCcgTc22AY.1030.000012
ORF3a103A103VgCcgTc22AY.1050.001286
ORF3a103A103VgCcgTc22AY.1080.002205
ORF3a103A103delGCC---22AY.1080.002205
ORF3a103A103SGccTcc22AY.1090.001479
ORF3a103A103AgcCgcT22AY.1170.000169
ORF3a103A103SGccTcc22AY.1180.000125
ORF3a103A103TGccAcc22AY.120.000632
ORF3a103A103TGccAcc22AY.1200.000074
ORF3a103A103AgcCgcT12AY.1200.000037
ORF3a103A103AgcCgcA12AY.1200.000037
ORF3a103A103VgCcgTc22AY.16.10.00094
ORF3a103A103DgCcgAc22AY.250.000012
ORF3a103A103PGccCcc22AY.260.000057
ORF3a103A103DgCcgAc22AY.270.000129
ORF3a103A103SGccTcc22AY.290.000032
ORF3a103A103delGCC---22AY.290.000032
ORF3a103A103AgcCgcT22AY.29.10.000441
ORF3a103A103TGccAcc22AY.30.00002
ORF3a103A103AgcCgcA12AY.30.00001
ORF3a103A103AgcCgcT12AY.30.00001
ORF3a103A103PGccCcc22AY.320.001065
ORF3a103A103VgCcgTc22AY.330.000134
ORF3a103A103SGccTcc22AY.34.10.00102
ORF3a103A103delGCC---22AY.350.000466
ORF3a103A103VgCcgTc22AY.390.000049
ORF3a103A103DgCcgAc22AY.40.000003
ORF3a103A103AgcCgcT22AY.4.20.000043
ORF3a103A103TGccAcc22AY.4.50.000215
ORF3a103A103delGCC---22AY.4.50.000215
ORF3a103A103DgCcgAc22AY.460.000208
ORF3a103A103AgcCgcA22AY.460.000208
ORF3a103A103VgCcgTc22AY.470.000062
ORF3a103A103AgcCgcT22AY.480.00093
ORF3a103A103AgcCgcT22AY.50.000041
ORF3a103A103SGccTcc22AY.5.40.000553
ORF3a103A103VgCcgTc22AY.540.000191
ORF3a103A103TGccAcc22AY.610.00021
ORF3a103A103VgCcgTc22AY.680.000547
ORF3a103A103SGccTcc22AY.710.00095
ORF3a103A103AgcCgcT22AY.770.002255
ORF3a103A103SGccTcc22AY.910.001461
ORF3a103A103TGccAcc22AY.980.000158
ORF3a103A103PGccCcc22B.1.10.000036
ORF3a103A103AgcCgcT22B.1.1.1280.014184
ORF3a103A103SGccTcc22B.1.1.2160.001781
ORF3a103A103AgcCgcT22B.1.1.2220.000408
ORF3a103A103SGccTcc22B.1.1.250.001137
ORF3a103A103TGccAcc22B.1.1.3060.000877
ORF3a103A103TGccAcc22B.1.1.3070.005063
ORF3a103A103VgCcgTc22B.1.1.3070.005063
ORF3a103A103SGccTcc12B.1.1.3260.001761
ORF3a103A103SGcCTcA12B.1.1.3260.001761
ORF3a103A103PGccCcc12B.1.1.330.000421
ORF3a103A103PGcCCcA12B.1.1.330.000421
ORF3a103A103VgCcgTc22B.1.1.370.000386
ORF3a103A103AgcCgcT22B.1.1.3970.004505
ORF3a103A103SGccTcc22B.1.1.3980.006452
ORF3a103A103AgcCgcT22B.1.1.4640.002946
ORF3a103A103SGccTcc22B.1.1.5180.012658
ORF3a103A103AgcCgcT22B.1.1.5190.000079
ORF3a103A103TGccAcc22B.1.160.160.001859
ORF3a103A103DgCcgAc22B.1.1770.000026
ORF3a103A103TGccAcc22B.1.177.210.000153
ORF3a103A103SGccTcc22B.1.177.570.000562
ORF3a103A103SGccTcc22B.1.177.860.000367
ORF3a103A103delGCC---22B.1.20.000018
ORF3a103A103DgCcgAc22B.1.2210.000142
ORF3a103A103FGCCTTT12B.1.2210.000071
ORF3a103A103FGCcTTc12B.1.2210.000071
ORF3a103A103AgcCgcT22B.1.2340.000264
ORF3a103A103delGCC---22B.1.2400.000431
ORF3a103A103SGccTcc22B.1.2580.000133
ORF3a103A103VgCcgTc22B.1.2580.000133
ORF3a103A103TGccAcc22B.1.3510.000059
ORF3a103A103SGccTcc22B.1.36.160.002849
ORF3a103A103VgCcgTc22B.1.5260.000047
ORF3a103A103TGccAcc22B.1.5670.006667
ORF3a103A103AgcCgcT22B.1.6210.000177
ORF3a103A103IGCcATc12B.1.910.002075
ORF3a103A103TGcCAcA12B.1.910.002075
ORF3a103A103IGCCATA12B.1.910.002075
ORF3a103A103AgcCgcT12B.1.910.002075
ORF3a103A103TGccAcc12B.1.910.002075
ORF3a103A103AgcCgcA12B.1.910.002075
ORF3a103A103SGccTcc12B.1.910.002075
ORF3a103A103SGcCTcT12B.1.910.002075
ORF3a103A103FGCCTTT12B.1.910.002075
ORF3a103A103FGCcTTc12B.1.910.002075
ORF3a103A103AgcCgcT22L.30.007092
ORF3a103A103PGccCcc22P.10.000032
ORF3a103A103PGccCcc22P.1.140.000096
ORF3a103A103TGccAcc22P.1.140.000096
ORF3a103A103TGccAcc22P.1.150.000465
ORF3a103A103VgCcgTc22P.30.00319
ORF3a103A103FGCcTTc110.055556
ORF3a103A103PGccCcc110.055556
ORF3a103A103TGccAcc110.055556
ORF3a103A103CGCcTGc110.055556
ORF3a103A103delGCC---11A0.000387
ORF3a103A103TGccAcc11A.2.5.20.001572
ORF3a103A103VgCcgTc11A.270.001656
ORF3a103A103AgcCgcT11AD.20.000219
ORF3a103A103SGccTcc11AD.20.000219
ORF3a103A103delGCC---11AH.30.003802
ORF3a103A103LGCCCTT11All0
ORF3a103A103XGCCTAA11All0
ORF3a103A103EgCCgAA11All0
ORF3a103A103YGCcTAc11All0
ORF3a103A103delGCC---11AV.10.005051
ORF3a103A103SGccTcc11AY.10.000396
ORF3a103A103TGccAcc11AY.1000.000046
ORF3a103A103delGCC---11AY.1000.000046
ORF3a103A103PGccCcc11AY.1030.000006
ORF3a103A103DgCcgAc11AY.1030.000006
ORF3a103A103SGccTcc11AY.1060.000335
ORF3a103A103delGCC---11AY.1060.000335
ORF3a103A103AgcCgcT11AY.1100.000113
ORF3a103A103AgcCgcT11AY.1110.000183
ORF3a103A103VgCcgTc11AY.1110.000183
ORF3a103A103delGCC---11AY.1110.000183
ORF3a103A103SGccTcc11AY.1160.000287
ORF3a103A103VgCcgTc11AY.1170.000085
ORF3a103A103AgcCgcT11AY.1190.000035
ORF3a103A103DgCcgAc11AY.120.000316
ORF3a103A103SGccTcc11AY.120.000316
ORF3a103A103VgCcgTc11AY.1200.000037
ORF3a103A103TGccAcc11AY.120.10.000321
ORF3a103A103del1gCcg-c11AY.120.10.000321
ORF3a103A103SGccTcc11AY.120.2.10.000498
ORF3a103A103AgcCgcT11AY.120.2.10.000498
ORF3a103A103DgCcgAc11AY.130.000161
ORF3a103A103AgcCgcT11AY.140.000088
ORF3a103A103SGccTcc11AY.140.000088
ORF3a103A103TGccAcc11AY.160.00038
ORF3a103A103SGccTcc11AY.160.00038
ORF3a103A103TGccAcc11AY.16.10.00047
ORF3a103A103AgcCgcT11AY.16.10.00047
ORF3a103A103SGccTcc11AY.170.008197
ORF3a103A103AgcCgcT11AY.20.000356
ORF3a103A103delGCC---11AY.200.000039
ORF3a103A103VgCcgTc11AY.220.002092
ORF3a103A103SGccTcc11AY.230.00007
ORF3a103A103SGccTcc11AY.240.000431
ORF3a103A103AgcCgcT11AY.270.000065
ORF3a103A103PGccCcc11AY.30.00001
ORF3a103A103VgCcgTc11AY.30.00001
ORF3a103A103AgcCgcT11AY.300.000396
ORF3a103A103delGCC---11AY.330.000067
ORF3a103A103PGccCcc11AY.330.000067
ORF3a103A103TGccAcc11AY.330.000067
ORF3a103A103AgcCgcT11AY.34.10.00051
ORF3a103A103delGCC---11AY.34.10.00051
ORF3a103A103PGccCcc11AY.360.000148
ORF3a103A103PGccCcc11AY.370.000316
ORF3a103A103PGccCcc11AY.380.000499
ORF3a103A103PGccCcc11AY.390.000025
ORF3a103A103delGCC---11AY.390.000025
ORF3a103A103VgCcgTc11AY.39.10.00004
ORF3a103A103NGCcAAc11AY.40.000002
ORF3a103A103DgCcgAc11AY.4.20.000022
ORF3a103A103AgcCgcT11AY.4.2.10.000149
ORF3a103A103TGccAcc11AY.4.30.000842
ORF3a103A103VgCcgTc11AY.4.40.000409
ORF3a103A103AgcCgcT11AY.4.50.000107
ORF3a103A103del1Gcc-cc11AY.4.50.000107
ORF3a103A103DgCcgAc11AY.400.000964
ORF3a103A103PGccCcc11AY.420.00004
ORF3a103A103AgcCgcT11AY.420.00004
ORF3a103A103del1GCcA-c11AY.430.000004
ORF3a103A103GgCcgGc11AY.430.000004
ORF3a103A103del1gCcg-c11AY.440.000006
ORF3a103A103SGccTcc11AY.450.000122
ORF3a103A103VgCcgTc11AY.450.000122
ORF3a103A103AgcCgcT11AY.450.000122
ORF3a103A103TGccAcc11AY.450.000122
ORF3a103A103TGccAcc11AY.460.000104
ORF3a103A103PGccCcc11AY.46.40.000165
ORF3a103A103SGccTcc11AY.46.40.000165
ORF3a103A103SGccTcc11AY.46.50.000198
ORF3a103A103TGccAcc11AY.470.000031
ORF3a103A103SGccTcc11AY.480.000465
ORF3a103A103TGccAcc11AY.50.000021
ORF3a103A103VgCcgTc11AY.5.40.000277
ORF3a103A103PGccCcc11AY.530.000288
ORF3a103A103SGccTcc11AY.540.000095
ORF3a103A103VgCcgTc11AY.550.000917
ORF3a103A103SGccTcc11AY.550.000917
ORF3a103A103AgcCgcT11AY.590.00053
ORF3a103A103TGccAcc11AY.60.000041
ORF3a103A103VgCcgTc11AY.610.000105
ORF3a103A103AgcCgcT11AY.620.000436
ORF3a103A103AgcCgcT11AY.640.000595
ORF3a103A103SGccTcc11AY.680.000274
ORF3a103A103delGCC---11AY.680.000274
ORF3a103A103AgcCgcT11AY.7.10.000113
ORF3a103A103PGccCcc11AY.75.10.00018
ORF3a103A103TGccAcc11AY.75.10.00018
ORF3a103A103AgcCgcT11AY.760.004831
ORF3a103A103SGccTcc11AY.780.001541
ORF3a103A103AgcCgcT11AY.790.001211
ORF3a103A103SGccTcc11AY.840.000437
ORF3a103A103VgCcgTc11AY.850.000427
ORF3a103A103AgcCgcT11AY.850.000427
ORF3a103A103SGccTcc11AY.850.000427
ORF3a103A103DgCcgAc11AY.860.00083
ORF3a103A103SGccTcc11AY.870.000833
ORF3a103A103TGccAcc11AY.90.000068
ORF3a103A103PGccCcc11AY.9.20.000037
ORF3a103A103PGccCcc11AY.920.000287
ORF3a103A103TGccAcc11AY.920.000287
ORF3a103A103SGccTcc11AY.920.000287
ORF3a103A103TGccAcc11AY.930.000273
ORF3a103A103AgcCgcT11AY.930.000273
ORF3a103A103VgCcgTc11AY.980.000079
ORF3a103A103TGccAcc11AY.98.10.000048
ORF3a103A103SGccTcc11AY.98.10.000048
ORF3a103A103VgCcgTc11AY.98.10.000048
ORF3a103A103GgCcgGc11AY.99.10.001553
ORF3a103A103PGccCcc11B0.000128
ORF3a103A103delGCC---11B0.000128
ORF3a103A103SGccTcc11B0.000128
ORF3a103A103GgCcgGc11B0.000128
ORF3a103A103DgCcgAc11B0.000128
ORF3a103A103TGccAcc11B0.000128
ORF3a103A103delGCC---11B.1.10.000018
ORF3a103A103GgCcgGc11B.1.10.000018
ORF3a103A103CGCcTGc11B.1.10.000018
ORF3a103A103AgcCgcT11B.1.1.10.000327
ORF3a103A103VgCcgTc11B.1.1.1210.002427
ORF3a103A103SGccTcc11B.1.1.1320.014925
ORF3a103A103DgCcgAc11B.1.1.1530.001095
ORF3a103A103delGCC---11B.1.1.2040.00304
ORF3a103A103SGccTcc11B.1.1.2320.001815
ORF3a103A103DgCcgAc11B.1.1.2370.005405
ORF3a103A103TGccAcc11B.1.1.250.000569
ORF3a103A103SGccTcc11B.1.1.280.000311
ORF3a103A103VgCcgTc11B.1.1.2800.003086
ORF3a103A103SGccTcc11B.1.1.2940.001266
ORF3a103A103SGccTcc11B.1.1.3050.003861
ORF3a103A103delGCC---11B.1.1.3120.001912
ORF3a103A103delGCC---11B.1.1.3150.008475
ORF3a103A103AgcCgcT11B.1.1.3170.000412
ORF3a103A103XGCCTAA11B.1.1.3260.001761
ORF3a103A103YGCcTAc11B.1.1.3260.001761
ORF3a103A103AgcCgcA11B.1.1.3260.001761
ORF3a103A103EgCCgAA11B.1.1.3260.001761
ORF3a103A103DgCcgAc11B.1.1.3260.001761
ORF3a103A103SGccTcc11B.1.1.330.000421
ORF3a103A103AgcCgcA11B.1.1.330.000421
ORF3a103A103DgCcgAc11B.1.1.3720.000689
ORF3a103A103AgcCgcT11B.1.1.3730.02381
ORF3a103A103AgcCgcT11B.1.1.3760.005952
ORF3a103A103delGCC---11B.1.1.4090.002833
ORF3a103A103TGccAcc11B.1.1.4160.000905
ORF3a103A103delGCC---11B.1.1.4200.001006
ORF3a103A103AgcCgcT11B.1.1.460.004367
ORF3a103A103AgcCgcT11B.1.1.570.011494
ORF3a103A103LGCCCTT11B.1.1.70.000001
ORF3a103A103del1Gcc-cc11B.1.1.70.000001
ORF3a103A103IGCCATT11B.1.1.70.000001
ORF3a103A103AgcCgcT11B.1.1.980.018519
ORF3a103A103SGccTcc11B.1.1260.001276
ORF3a103A103delGCC---11B.1.1400.018868
ORF3a103A103VgCcgTc11B.1.1430.021277
ORF3a103A103delGCC---11B.1.1570.002985
ORF3a103A103delGCC---11B.1.1600.000031
ORF3a103A103DgCcgAc11B.1.1600.000031
ORF3a103A103VgCcgTc11B.1.1600.000031
ORF3a103A103delGCC---11B.1.160.230.004831
ORF3a103A103SGccTcc11B.1.160.80.001289
ORF3a103A103PGccCcc11B.1.1770.000013
ORF3a103A103delGCC---11B.1.177.180.00116
ORF3a103A103AgcCgcT11B.1.177.210.000076
ORF3a103A103AgcCgcT11B.1.177.240.001295
ORF3a103A103VgCcgTc11B.1.177.350.000691
ORF3a103A103AgcCgcT11B.1.177.430.001477
ORF3a103A103AgcCgcT11B.1.177.460.000918
ORF3a103A103delGCC---11B.1.177.510.004566
ORF3a103A103AgcCgcT11B.1.177.580.001332
ORF3a103A103PGccCcc11B.1.177.60.000977
ORF3a103A103delGCC---11B.1.177.620.001192
ORF3a103A103SGccTcc11B.1.177.750.001041
ORF3a103A103VgCcgTc11B.1.177.810.000189
ORF3a103A103SGccTcc11B.1.177.820.000477
ORF3a103A103AgcCgcT11B.1.177.840.006667
ORF3a103A103PGccCcc11B.1.20.000009
ORF3a103A103del1gCcg-c11B.1.20.000009
ORF3a103A103VgCcgTc11B.1.2100.002132
ORF3a103A103TGccAcc11B.1.2140.003663
ORF3a103A103DgCcgAc11B.1.221.40.004167
ORF3a103A103SGccTcc11B.1.2320.000537
ORF3a103A103PGccCcc11B.1.2340.000132
ORF3a103A103TGccAcc11B.1.2390.001221
ORF3a103A103SGccTcc11B.1.2400.000216
ORF3a103A103AgcCgcT11B.1.2410.000812
ORF3a103A103PGccCcc11B.1.258.110.000396
ORF3a103A103SGccTcc11B.1.258.110.000396
ORF3a103A103AgcCgcA11B.1.2790.000514
ORF3a103A103SGccTcc11B.1.3490.000715
ORF3a103A103PGccCcc11B.1.3510.00003
ORF3a103A103DgCcgAc11B.1.3510.00003
ORF3a103A103AgcCgcT11B.1.351.20.000303
ORF3a103A103del1gCcg-c11B.1.360.000146
ORF3a103A103TGccAcc11B.1.360.000146
ORF3a103A103SGccTcc11B.1.360.000146
ORF3a103A103SGccTcc11B.1.36.240.006173
ORF3a103A103PGccCcc11B.1.36.250.002208
ORF3a103A103VgCcgTc11B.1.36.290.000517
ORF3a103A103VgCcgTc11B.1.36.310.001751
ORF3a103A103AgcCgcT11B.1.36.350.002604
ORF3a103A103delGCC---11B.1.3620.001541
ORF3a103A103AgcCgcT11B.1.362.20.004717
ORF3a103A103SGccTcc11B.1.3670.000792
ORF3a103A103AgcCgcT11B.1.3690.000285
ORF3a103A103VgCcgTc11B.1.3750.00082
ORF3a103A103AgcCgcT11B.1.4160.001269
ORF3a103A103AgcCgcA11B.1.416.10.001563
ORF3a103A103delGCC---11B.1.416.10.001563
ORF3a103A103SGccTcc11B.1.4270.00005
ORF3a103A103AgcCgcA11B.1.4270.00005
ORF3a103A103NGCcAAc11B.1.4290.000024
ORF3a103A103VgCcgTc11B.1.4520.013699
ORF3a103A103AgcCgcT11B.1.466.20.000391
ORF3a103A103SGccTcc11B.1.466.20.000391
ORF3a103A103AgcCgcT11B.1.4870.019608
ORF3a103A103VgCcgTc11B.1.4980.020408
ORF3a103A103VgCcgTc11B.1.4990.00105
ORF3a103A103AgcCgcT11B.1.5090.000866
ORF3a103A103TGccAcc11B.1.5240.001406
ORF3a103A103SGccTcc11B.1.5240.001406
ORF3a103A103AgcCgcT11B.1.5240.001406
ORF3a103A103SGccTcc11B.1.5250.000113
ORF3a103A103AgcCgcT11B.1.5260.000024
ORF3a103A103AgcCgcT11B.1.5650.00081
ORF3a103A103del1gCcg-c11B.1.5680.001111
ORF3a103A103AgcCgcT11B.1.5750.000303
ORF3a103A103SGccTcc11B.1.5750.000303
ORF3a103A103SGccTcc11B.1.595.20.04
ORF3a103A103delGCC---11B.1.5960.000087
ORF3a103A103SGccTcc11B.1.5960.000087
ORF3a103A103SGccTcc11B.1.5990.00365
ORF3a103A103AgcCgcT11B.1.6090.000479
ORF3a103A103VgCcgTc11B.1.6090.000479
ORF3a103A103TGccAcc11B.1.617.10.000129
ORF3a103A103SGccTcc11B.1.617.10.000129
ORF3a103A103delGCC---11B.1.617.10.000129
ORF3a103A103AgcCgcT11B.1.617.10.000129
ORF3a103A103VgCcgTc11B.1.617.10.000129
ORF3a103A103del1gCcg-c11B.1.617.20.000004
ORF3a103A103del2GCc--c11B.1.617.20.000004
ORF3a103A103VgCcgTc11B.1.6180.004032
ORF3a103A103TGccAcc11B.1.6210.000089
ORF3a103A103TGccAcc11B.1.6250.002353
ORF3a103A103SGccTcc11B.1.6310.003367
ORF3a103A103TGccAcc11B.1.6370.000073
ORF3a103A103delGCC---11B.1.6380.052632
ORF3a103A103AgcCgcT11B.1.940.027027
ORF3a103A103SGccTcc11B.1.970.025641
ORF3a103A103VgCcgTc11B.400.000364
ORF3a103A103TGccAcc11C.140.004329
ORF3a103A103TGccAcc11C.370.000116
ORF3a103A103PGccCcc11C.37.10.002618
ORF3a103A103TGccAcc11C.400.027778
ORF3a103A103SGccTcc11D.20.000075
ORF3a103A103del2GCC--N11P.10.000016
ORF3a103A103VgCcgTc11P.1.120.000484
ORF3a103A103AgcCgcT11P.1.150.000232
ORF3a103A103SGccTcc11P.1.170.000162
ORF3a103A103SGccTcc11P.1.20.001156
ORF3a103A103VgCcgTc11P.20.000187
ORF3a103A103TGccAcc11P.20.000187
ORF3a103A103AgcCgcT11P.70.004367
ORF3a103A103VgCcgTc11Q.30.000145
ORF3a103A103delGCC---11Q.40.000455
ORF3a103A103delGCC---11U.30.003861